TCONS_00009927 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009927
Unique NameTCONS_00009927
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1567

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009927 ID=TCONS_00009927|Name=TCONS_00009927|organism=Clytia hemisphaerica|type=transcript|length=1567bp
aaactccgataaggtctattgaaaacgctaaaaaataagaaatttgaaat
aagaaaattgtaaatttaagaTCCAACCATATAGACAAAcctaatacaaa
atcttttgGAGGGATTCTAATCGCTAATACCTATAGTGAGCATTAGAACG
GCGTCTGAATAGAATGGCATGCAGTGCTGAAAACTTTCCACAACTACCCG
CTGTTCAGGTTACTTCACGAGGCTACGATTATGAAGTTCGAGGGGATACA
CCACGGGAATGTCAATGTGTCATCTGTCATCATTTACTGAGAAAAGCAAT
CGATTTACCATGTGGTCATGCTTTTTGTAAGCGATGTTTGAGTGAttggg
aaaatgaaattctagCTAGAAAtAATAATTTAGTATGTTCAGTCTGTCAA
ACCCCATACAAAGCAGAACAGCACCACCCAAATATTCCGATTGATCGAAT
GATTCGCGATTCACTAGATatcttttgtaaacaaagaaaCAATGGATGCA
ACTGGGTTGGAAAGATATCAAATTATGAGGACAGTAAACATTTAGAGAAG
CTATGTGATTACACTCAAGCACAATGTAAATATCAAGAAGTTGGCTGTGA
TGTCGAGTTCATTCGCAGAGATGCACAAGAACATGAGAAGAGTTACAAAG
ACAAACACCAAGCAATGTTGTTACAAGCATTCCTTCAATCAAAGCAAGCA
GCTAAACAAGAATTCAATGTTGCCAAAGAAAGTAGAAGAGAAATAACCAG
AGATTTAACGAGTGTTCAACAAGATTCTCAAATGATTACTGGCAGGTTGG
TTAGTGAAAAGATGGATCGAGAAAGGTTGGAATTAGAGACTAATGAGAAA
CACGAGGAAATTGATGCTAAAATAGGAACTCATCAAAATACAATGAGAAA
TTTAGAAACAACAATCGCAAAACATCAACAATCATCGGATAACAACTACA
CGCAAATCGAGCAGAAAAATTCGGAGCTAGAAAGACAAGTTGAACTGTTA
AAGACACAAATCcaagaattgaaaaaagagGTTGATCGAACGACAGTTAA
CGACGTTACGAAACGTGATGAATTACGAAAAGATATGgaggaaaaaatca
aatctgGTGGTGTGAGTGGATGTTGCTGGTGGCTAACAGTCCTCTTAGCT
GCTTTACCGACCATCTTCATTTTGTGTATATTGTTACATGATAAAGACTT
TGATTGGATTAATTTTGATGGAGTTATATTCAATGGTAAATTTGGTGAAT
TGTGGCAAAATTTCCTCAAATGAAACACTCAATATATTATTTTAACATGA
ATATGCTTTGAATTTGTTTGTAGAATATACTCTAAAAAGGTGACATGATG
AGCAGTGTAcatagtccttataaaaaaccctAAAACTTTTTAATAGTGTT
TTCCTTTGTTgatatcaaaagatgaaaatcggTTTGCTCAGTTTTAGATC
ACTTTACCTAGTGCTCCTCTTGGGAtttgtttaagatttaatcacatgat
caaaaagtgagccaaacaaactaatttctcaacacaagttcaagtaagaa
acaatagaaagaaacaa
Run BLAST on NCBI

transcript from alignment at sc0000100:307008..321357-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009927 ID=TCONS_00009927|Name=TCONS_00009927|organism=Clytia hemisphaerica|type=transcript|length=14350bp|location=Sequence derived from alignment at sc0000100:307008..321357- (Clytia hemisphaerica)
AAACTCCGATAAGGTCTATTGAAAACGCTAAAAAATAAGAAATTTGAAAT
AAGAAAATTGTAAATTTAAGATCCAACCATATAGACAAACCTAATACAAA
ATCTTTTGGAGGGATTCTAATCGCTAATACCTATAGTGAGCATTAGAACG
GCGTCTGAATAGAATGGCATGCAGTGCTGAAAACTTTCCACAACTACCCG
CTGTTCAGGTAAGGATTCTGTTCTGGGCAGTTTCTCTTTTACATTTATCC
TTTATCTGCATCTTAAGTGGAGTCCAACAATACAAACACGTACAGGGAAC
GCAAATTTGTTCGAATAATGGAAAGTTGGAGTTATGGAAATTGGTTTTAT
AAAGTATTGTTAACTGAAGGGACCATAAAACTGAGAAAGATGAATTTTTA
TCCCCACACTCCCCCTTCTCACAGACTCGCTGGGACCCCTTCACACTGGA
AAAGTTGGCCAAAATATCGTCCCAGTGGAAAATCATACTCTAATTTTGTC
CCCGCGGAAAATAACCAGATAAGCTCATCCCCACTGCAAAATATTGTGCT
ATTTTTTCTATCCCCACTGAATTTTCTGGCTAGAGAACAATAGAATTCAA
GTCCCCAGCCATAAAAACATGGGAATATCAATCCCATCGAGTTTTGGTCC
GTTATTTTTACCCCCCTTGCTGATAAAATCCTACCGGGTCTTTGAGAAGG
AAGTGTCCCTGTGGTAGGAAAAAGTTTCCACCAGAGCTGTGAGACAGAGG
TATTCATAACGTTTAGTACATGCAGAATATAGACCCGGGGTACTAGGGTT
GGCGGATGAGAGATATGTGCAGATGGGACCTCACAAAAACCGACTCTTAG
AGAGACTGATTTTTGCTGATAAGATGACCCTTAGAGAAACTTTTTTTGAA
AAATGCGTTCTTCGATTTTTGAAAAATTCCCTACCTTTGGAGAGACTTTT
TTACAATTTTACAATTAAAAATCCTTCTTAAAATTGTGAATTTTTGCGAC
CCTAGAAAAAAGGTAAAAAAAACAACCCTTACTGTCCGCACATACCCCAT
ACCCATTTTTGCCTAAGTACCCCCCCCCAGGAATATGAACTTTGTCTTTT
TTTTTTTAATCATGAATCACTGCTGCATTCTGGAGAAGATCTTTGATCTA
CGTTTCCCAGCAATCAAGATATTCACAGAATTACTCTCTCGGACCAAACT
ATGGTTTTAAGCTCTAGGATCAAAACCCCCTTTCATAAATGAAATACCTT
CAACACAGCCAGTTGCTTAACCCTATATACGGCCTATGGGGGGGGACTGT
TTCTGTTCGGAGGTCAAATTATTGGTAATAGCTCCTGAAATAATAGAGCT
TTTGCCATGAAATTTTCTGTAAATTCCTAACTTTTATTTATCTTCAAAAT
TAAAGACAGCTTCTGACAGTAAGGTGTCACAAAAATTGACAATTTTCCAA
TACAAATTTAATTTTTATGTCAAATATATCGTTTAAACCGTAATTTAATG
AATATTTAGGATAAAAGAACAAAGGAAGTTTGCGGTTTTTGCACACTTTG
GGCATGATGAGCGACGTCATCAAAAAAACTTTTTGTCAAAAGTTACTTTA
TGTGACAAGGATCTTGTGTGCCAAATTTCATCCAAAAAGACCCGCTAGAT
CAAAAGTTAACTCGGGTAAATTAATGCGTGTCCAAATTTTCGTTATTTTT
CCGGAGGCAGTTCCACCCCTCCTAGCATAATAAATTATACCTTTAAAGAA
GCGCATTACGATGTAGAACATGAAAATCGGTGTTACTTAAATTTAGTTTT
TGCCAATTTTGCGAAAAACCTGACGTCAGCAAAACTTGATTTTTAAATAA
CTCCAATTTGGCTAATGGTATGAACATGAAATCTAGAGCAAAGTTGCACA
TCATTAAAAGTATCATTTTTAAACAAAAGTTTTTTGAAATTTTGCTGATG
TCAGCACTTTATTGCAAANAGAAAAACCCCCCCCCCCCCCTATTTGTTCT
GAACCGCCCCTAAAAGCCTAGTATGAATAAGGTTAAGTGAATTTACTTTA
GCATGTATTTGGTTAGAAAACTAATATATAATGACAAAATATAGTCCCGT
ATTACAGCTAAACATCCACTAGACAACCAGCCGAATATCGTCGCTGAGAT
TTTAATTCCACCCAAAAATTCCCATTTAGAAAATTACACAACACTCTAAT
CTAAATTTCAACTAGGCCTGATTTTGGTTCGTAAGCGTTAGACTCACTAT
CATTTAAAACAGTAGTGTGGTGACAGTGGTCATGTTTTTTTCCACTCGTA
CATTTAAAACTAGAAATTCAATGTATCCTCATGGATAGTTAGTCTCCCAA
GAAGCGGGTAAAACTTAGATAAAAAAAGAGTAGTCATAGTCACTTTGACT
TAGGACAATGGGCCATTATATCAATACACGGGGTGGACAAACATTTCCAA
GGCGTTATTTGAGTGAAATTTCCAAGGGGTCTAAAAGAGTGTTTTTTCAT
TTTTCCAGGAGGTAAAAAATTATTTCAAAATTTCCAGACTGATTTTAGTT
CGTCCATCATCATTTTATAAGATAGGGTGAACTTTTTCCAAGAACTTCTT
TGCAAATTTTTCCACTTTTCCACACATTTCCAAGAAATATTTTTTGACTT
CAATAGGTTCGTTCACGCCCCTTTATGGAAATTTAATGGAACGGCCCAAA
ATTTTGTTTTAGGCACCTCCTTCTCACAGACCCGGTAAGATTTTTTCAGC
CGTTGGGGGGTAAAAATAAAGGACCAAAACTCGATTGGGATTGATATTCT
CAATTTTTTTATGGATGGTGATTTGAGTGCCATTGTTTTTTAACCAAAAG
ATTCAGTGGGAAAGGAGATAGATAGATACACCACTAGAATGCCAATGTGT
TATCATCTGTTATTATTGATATACGTAAGTCAAGATGACGTCATATTTTT
TAACGGAAGCACACAAAAAGCCGGTTTTTGACCTCTGTGTGTTTCTATTT
TTAGTAACAGAGAGAGGACAAATTCTGGCTTTTTTAGGGTGTTTCCGCTA
GAAAAATGACTTACGCATATCAAGAATAAATTTTGCTTTAGGTTACTTCA
CGAGGCTACGATTATGAAGTTCGAGGGGATACACCACGGGAATGTCAATG
TGTCATCTGTCATCATTTACTGAGAAAAGCAATCGATTTACCATGTGGTC
ATGCTTTTTGTAAGCGATGTTTGAGTGATTGGGAAAATGAAATTCTAGCT
AGAAAGTGAGTTGAAAATTCAAATGTTTTTAAAATAATTCATTTATGGAG
TGATAAGGTTTTAAGACCTCATCGCAACGGTGCAGAGTGGATTCCAGAAG
ATAATTCAATATGTGGATGGAGGATACAACATTTTTTGGAAATTTACCTC
CTGGACATTGTGACTTTTGATCTCCTGGACAGCAGGTCTAATCCTCAAAG
AAAGCATCAGTTGACATCCTAGATTTTCAAAATTACCCCCAAAAAAAGCA
AGTTTCCCCCAGACAAGGCAAATTTTGTAAATTTCTCACTACCCCCCACT
GGACAATACACCCTTCAACCCTCATGTATGAACATTTTCCGAAAGAGCTT
ATTTCCGGTTAGAATCTCTATGAGCAAAGAAAAACTATACTTTGTAATTC
CTGGCGACCAAATTCGTTGTTGAAGCCATCGTCATCATAAAAATCAGACA
GATTGGATTCAGAAAACGGGTTTTTGTCGCCAGGTTATGGGTTAACTTTG
CATGTTCATTGTTCTCACATATGGCGGGCCCCCACTTTTTTGCAGACCAT
GCCATACTTTTTTAAAAGTTACTATTTTAAGCCATAAAAACTATTATTTC
CCCTCTCGATTTCCCCCAATTAGATAACGTTTTAAGGTGTTTTGCGAGTG
TAAAATTTTTTTCGTCGCCCAACAATTGTGGGCGACATTTTTTTCCAAAA
TATTGGCCCTCCCCCCACTCGAATGCTCGCCGGGGCCCATGTTTCATCGG
CCTGTTATTTTCTTCTTCTTTTCAGTAATAATTTAGTATGTTCAGTCTGT
CAAACCCCATACAAAGCAGAACAGGTAACAAAATTTCAGATTTTTAGCGA
TTTGAAAAAACATATTTAAAGTTCTTTTATTTTTACAAACGGTTCAATAT
TAGAACCTTAAAATGCCAATTTCAGGGCATTTTTAGCTTTAAATGACACA
TCATTTTGACCATTTCCATATTTTGACTACAATCATTAAAAAATATCATA
AAGATCATTCCTTTTTAAAATTTAGCACCACCCAAATATTCCGATTGATC
GAATGATTCGCGATTCACTAGATATCTTTTGTAAACAAAGAAACAATGGA
TGCAACTGGGTTGGAAAGATATCAAATTATGAGGTACAGTTAGTCACTGA
CAAAACTCACTACACATTTTTTATAAGAATATGCAAAAACTTTGACGCCT
TTTGGATGTTCTTGACTTTTTGCAGTTTTAAGTCCAAAATACTCTTAAAA
TGTTCTTAATTTCACCATTTTTGCCTAAGTTTTAGAGCCTTAAAATTTTC
TCAACTTGTCTCAACTTGCTCTTAATATTTTGGCTATCAAAGCTATATGT
AGTTTATTTCCTTTTAAAAACGTGTATGAAAATTCCTCTATCTTGACCGA
CTTAAATTTATGATTTAGGTTTTTACGTTTATCGCTTCGTATTATCTTCT
TCCAGGACAGTAAACATTTAGAGAAGCTATGTGATTACACTCAAGCACAA
TGTAAATATCAAGAAGTTGGCTGTGATGTCGAGGTAAGCAAGCTTTATTC
TTACAAACGGGTTAAATTTCGGAGAAAGCTAAACTGTGGTTTTCAAAGTA
CATTCGAGAGTAACCCGAAGGCTTTTCCTTCAGAACTGAACTATACAGTG
TGTCCTAAAAAGAAGTATAGTAAAATCCTCATCATTACTGCCTATTTTTT
TGATTTGTATACTTGATATTCATCTAGAGAATTGAATACCTATTGATTGA
ACAAAGAATTTTATTCTTATTTTAATTATTTTAAGCCCAGTTCGGGCAAT
GGGGGTTGGGATTTAACATTATATAAAAATTTATCCAATTTTTTTGGAAC
ACACGGTGTACCTAAAGGTAATAAGGAAGGGCGTCACTTTTTTTTCGTCT
TGAATGCTCTGAACACTTGATCCTTCTTTTTAATTGCTGAGCACTTAACA
GAGAGGCATAAAGACCATATTTAACACGTTTTTTTACAACATAAGGCTTG
GAAGGCCAAAAGAAAGTTCGGAAGGGACCTCAGAAAACCGACTCTTAAAT
AAACGAATAAACTAATTTTTTAGTGAAAAAATGCCTCTTAGGGAGACTTT
TTTGAAACATGTCTTACCCTAGGGTATTCTTTACATCTTTTTCTCTCAAA
AACTTTCCAAAAGGACCGTTAGCGGAGGAACTACTTTGAAATTTTCTGAT
TTTTGTAACCCTTCGAGAGACTTTGAAAGGTGAAAAACCAACCCTTATAG
TCGGCACATACCCAGCATCCATATACCCCCGGGTATTAGCTTCTAGTAAT
ATCTTCATCTCTAATCTAACTTTTATTAGTTCATTCGCAGAGATGCACAA
GAACATGAGAAGAGTTACAAAGACAAACACCAAGCAATGTTGTTACAAGC
ATTCCTTCAATCAAAGCAAGCAGCTAAACAAGAATTCAATGTTGCCAAAG
AAAGTAGAAGAGAAATAACCAGAGATTTAACGAGTGTTCAACAAGATTCT
CAAATGATTACTGGCAGGTTGGTTAGTGAAAAGATGGATCGAGAAAGGTT
GGAATTAGAGACTAATGAGAAACACGAGGAAATTGATGCTAAAATAGGTA
AGATATTTATGATTTTTATTGTGAGGCAACCCTTAAAAAATTTTTTTTTT
TCTCAAGAGTTCATATGTATACAGTTAAACCTCTAATTAACGGACACTCT
AAAAGGCGGACACCTCTGATTAGCGGGCAATTTCATTTTCCCCGGTCGTT
TCCTAGTCAAATCCTCATAAAAAAGTTTCTAAAAGGCGGACACTCAATTA
ACAGACCCTCTGATTAGCGGACAATTTTTTTCGCACGAAATGGCCAAAAC
CCCTATTTTAGCTCTCCAATTAGCGGACATTGAATATCAAACGGGTCACA
GACGTCCAAAATTGAAAAAAAAATTTTTAGATATTTTTATTTCAAGCACT
TATCAGTCTTATTATTCAAATTATTTCTACAAATTTCCAGTTTTCCCTTG
ACCCATTCAACGAATTTAGGTGGGCCAAAGAAATCATAAATCAGNGGCTA
TTGATTAATTTATACGTTGTAACTACCTTTTGTAATGAGCCTATGTGATG
GAGAACGTTCTTATATTTTAGCGATAACACACACAAATTTTTTTACTCAA
TCGCATGTTCAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCAAGGCCGC
GCAACTTTGGTAGGATTTGTTGGCTTCAAATCCTACCAAAGAGATTGACC
TCTAGCCCTTCGGGCTTGAAACTCAATGGTTCAAACTCGATACTTTTATT
AGGGACACCCTGTAGAACTCTGGATACACAACGAGCTGGTTTTTCATCGA
TTTCTTATGTTCTAGCCTTGTCCGCAGTAATGACATCATTGTTCACCCTC
CTCCATTCACTAATAATTATTCGTAAATTTTTTTATTGCATTTTTCATCA
AAACACAGCTATACAATTCCCAAATGAGACTTAAAGATCTCTCAAGAGAG
TCAAATGAATCAAATTGATGCATTTGACTCTCTTGAGAGAGTCAAATGCA
TCAAATTGATTGCTAATGATATGTCGTTATGATGTTTCAAGCTGTGAGAA
AGATGCGACAAACATGCTATGTATAAGAAATTGAGTATTGACACTAGAAA
ATTTCAAACTTCCACCTCGCCAAAACCACCGGGCCACCGCGTGCCTCCAA
AAGATTTTTATATCACTATGAAGCCAAGATACTCCAGTCTAACATATGTC
AATCCTAGCTCTTCCCAGGAAAAAATTGGAAAGATATTGCCAACCTTATT
TTCAGCGTCATTCTAGGCTTTTTACTCAATTTTTCTTGCTTGATGAAGTT
TTTTTCACATTTAATTTCATAAATGTATTCGTTAAGCTTTCTTGCTTTCA
TTTTCAAAGTTGCATCCGGTAAATATACAAAAACAAGAGGTTACAGGACT
TTTTAGAAATGGGATTATTAATCATTTTTCAAAATCAGGGACCTTCGAAC
CGCCATGACAGTTGTCCTTTGCGGACAAAACTAGAACATCAATTGTTTTC
TAAAACAATGGAAAGACAACAGTTCGCTCTCCACCGTTTTATTTGATGTT
TATCCAGAGTTCTATGATAAATCCATGCTCAACTAAATCCCAAGACCCAC
GAAGTATTTTTCCACAATCTTATAATCGGGTCTTTCATCTTTCAGCTGTC
CGTTAGTGCTGTACAAGAGTCCCAAAAATATACTTTATCATAAAAATTTG
TCGACTTTAGTTGGACATTATGTCCGTTTTTGAGAAGTCACCTCAATTTA
AGTTCATTTTGGAAGAAACGGCGCCTTGTGACAATCCTTTATGCTTATTC
AGCTTCTTATTCTTTCTTTTAGGAACTCATCAAAATACAATGAGAAATTT
AGAAACAACAATCGCAAAACATCAACAATCATCGGATAACAACTACACGC
AAATCGAGCAGAAAAATTCGGAGCTAGAAAGACAAGTTGAACTGTTAAAG
ACACAAATCCAAGAATTGAAAAAAGAGGTACCTCAAAGGAAGAAATTTTG
GCAGGAAGAAAATTTTTCGGATTTGGCCAAAATCCACCAAATTAAGTTCC
CGCCAAAAATTTTTTTCCGCCATCCGCAAAATTAAATTCCCGCCAATTAA
ATTGCTTTTTTTATTCCCCNCAAGTCCGTACCCACCACCTCGATTTAACC
TCTTGCCAGTCACTCGAGCTCTTCTATGGCCTAGTGTCTGCAGATAAGTA
CTTTAGACCCCAGTTTTGTATTTTCGACACCCTGGGATGGCCTAATTTCA
AAATTGGAGCTTCGAGATCAAATGTTTCTAAAAGGCGGACACTTCTAATT
AGCGGACACTAACCCCTTTCCCCGACGGTGTCCGCTAATTAGAGGTTCCA
CTGTAATTCATGTTATGTCGCATAGAAACAGGTCTGCTCAACTCATGGAT
TTATCATACAGGGTGTCTCTAATAAAAGTATCGAGTTTGAACATGCGATT
GAGTAGAAAGTTTTAAGTGTGTATTCACAAAATTGTATTTTAAGCTCTCC
CTCTTTTTTCTTTGTCATTACAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGCCAAAAATTTTTTTCCGCCATCCGCAAAATTAAATTCC
CGCCAATTAAATTGCTTTTTTTATTCCCCCAAATGTGTGCTATTTCAAGC
TTTAAAACAGGTTTTTCCTTTTTTAATGACGTTTTTTGGACAAAAATGTC
CTTCATCCGCTAAATTATATTCCCACCAAATTTAATTTTCCAAGTTGACC
CCCAAATTAAATTCCCTCTGGAAAAACATTTTTTGGCCATCCGCCAAATT
AAATTCCCGCCAAAATTTCTTTCTTTAATCTAATTTATAATGAAATAAAA
TTAGGGGAATTTTGAGAATTCTGTCTCTCTTCGTATCGCTACATTGAACC
TACATTGAAATAATATAAATTTAAATCAGATAATTAGACTTTGTGGATTA
TAATTTAAACGATTCTATCGTCTACAAGGCTACACAATAATTAAGGAGGC
GAGTTAAATTCGAAAACGGTGTTTAGCCAGTGGGGGAGGTGTTTACAGTG
TAGAGTGTGTTTGCTCCAAACTCTACCACCACTATGTTTTCACTTAAACG
TCCGCGATGGCTGTAAACTCTGCCATAATAAAGTCCGACTCAATAGTATA
TGGACACTTGATTTTTTTAGCATTTTCTCAGCACTTACTTATGCTATTTA
AAAAAGCTACGTATACACCGTTGAAAAGAGATTTCCAAGGTGAATAATCT
AAAGGATGAAAGATTCTTTATACATTGAAAAATGAAGATGAAATAACGAA
GATTTTTTCTACTGTTTGAAAAATGATGAGACCAGACTATTTAGAAAATT
TAAACCTTGCTGATTTCAAATCGTGTTCAGATTTTTCGTATTCTTTCTCT
AACAAAAGTTACAGCACTGTGAAGTTTTCGGTCATTTTTCCTGTTTTCGG
TCCTTTTCGGCCGTTTTAGGCCTACTTCGTCAAAGGGCTGTAACTTTTTA
TCCAAAAAATATACCAAAAATCTAAACACAGAGTTGAAATCAGCAAGGTT
TAAATTTTCCGAATAGCCTAATAGTTTTTTTAAACAGTAGAAAAAATCTT
CATTTTTCCATCTTCATTTTTCCTCTTCATTTTTAGATCTTCCACATATC
TTTCATCCTTTAGATTATTATCCTTGGAAACATCTTTCCAACGGTGTATA
GTTTTTCTAATACAGCACAAATGGATGTTGAGAAAATGCTCAGAAACTAA
AGTATCAAACTCTGAGTTTGAAACTTAGGTATTGTGTCAACTCTTTATTA
TAGTAACGCCCTATATTTACTTATCGAGAACTCTACGAGGAGAAGATAAA
AAACCACTACAACAAGAAACTAAAGTATCCACATACTATTGAGACAAAAT
TTAATTTTTCTCTTGTGTTTTTTCTAACGGACAGTAGCATCGTCTAATGA
TATGTCTGCACTGCACTTTTGTCTTCACAGGCTCGGATACAGAGGGAGAC
TTTAACCAATGGAGGAGAGTGCACTTTATTATCGTATTACCTTATATGGA
AACTAATTACTCTCCATTAATAAGATAGCCTACCTCCTGTATCTGACCCT
GCTTCACGTAATTGACCTTTCAACTGTAGCCGCCAATTGCCACGTGGGCA
TTTTTTATCCGCTTTGTCTCATTAAAACCGTCCCAGTTCTTTTTTTCGCA
CCTATAGACAATAGAAAAATGTGTCAAAAAAAGGATTGGATCGAGTTTAG
CGGGGATGATTATTAAATAATTATGCGGCGCGCGCCTGACCGCGCGACTA
CCGTCGAAAAGGTGTATTGACCTTTCAACAATAAACACCTTAGGGTTAGT
ACCCGGGGAGGGGGGCACTGGGTTTGCAGACTGACGGTATGTGCGGGCCA
AAAATTGGCTTTTAAAATTGCACCCTTACAGTGCAGCAAAAATCAGTGAA
AATCATATCTTTAGAGTGCATTTTCCCCCAAATTTTCGATCCCTTTCGTG
CAAAAAATGGTCAAAATTCTTGCATTTTTGGTCAAAATATCTAGATTTTT
CAAGAATTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCCCTTAGGACCCGCACATACCCGTCGGTCCTTT
TGCCCAGCCGCCCCCCCCCCCGGGGGTTAGTAGGTCAAGGTAACCTGCAT
GGATTTACGTATTTTATGGTTTATCAAAAAGGTGATTAAAGGCTATTCAT
TTCTTCTAAATCGTTTTTTAACTGCGAAAATGATGTAGCACTTTCCTTCA
CAGATATCTAAAAAACTTTGATGGAGAACTACAATGTACAATACTCTTTA
TCCTCTTCAAGATTACAACTTCCCTTTGGAGAGCCTTGATTTCAACGTGA
TCTTAAGGAACAAAACTGTGCCTTCACTTGCTTTGGAATGACACCCCTGT
GTCACAGACCCAAAAATCCCAATTCTCAATGATGAAAAATTGCACACCGA
AACCACCCACACTTGATTTTTTAACCTTTAAACAATAGAATTTCCATAGA
GATTCCAGTACAAATTTTTATCCCCAATGAGGAAAAAAAGTTCCATCAGG
GTAGTGAGACAGGGGTGTGGAATGAGACATCTTGATTCACCGAGGATAAA
GAAGCTCCATCCAGTGTTTTAAAATACATTTTAAGATATCTGTGTTGTTA
TTTTAATTGATAGGTTGATCGAACGACAGTTAACGACGTTACGAAACGTG
ATGAATTACGAAAAGATATGGAGGAAAAAATCAAATCTGGTGGTGTGAGT
GGATGTTGCTGGTGGCTAACAGTCCTCTTAGCTGCTTTACCGACCATCTT
CATTTTGTGTATATTGTTACATGATAAAGACTTTGATTGGATTAATTTTG
ATGGAGTTATATTCAATGGTAAATTTGGTGAATTGTGGCAAAATTTCCTC
AAATGAAACACTCAATATATTATTTTAACATGAATATGCTTTGAATTTGT
TTGTAGAATATACTCTAAAAAGGTGACATGATGAGCAGTGTACATAGTCC
TTATAAAAAACCCTAAAACTTTTTAATAGTGTTTTCCTTTGTTGATATCA
AAAGATGAAAATCGGTTTGCTCAGTTTTAGATCACTTTACCTAGTGCTCC
TCTTGGGATTTGTTTAAGATTTAATCACATGATCAAAAAGTGAGCCAAAC
AAACTAATTTCTCAACACAAGTTCAAGTAAGAAACAATAGAAAGAAACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005569XLOC_005569Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009927-exon-sc0000100-1575043694:321150..321357TCONS_00009927-exon-sc0000100-1575043694:321150..321357Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1575043694:318103..318266TCONS_00009927-exon-sc0000100-1575043694:318103..318266Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1575043694:317284..317332TCONS_00009927-exon-sc0000100-1575043694:317284..317332Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1575043694:316975..317082TCONS_00009927-exon-sc0000100-1575043694:316975..317082Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1575043694:316575..316652TCONS_00009927-exon-sc0000100-1575043694:316575..316652Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1575043694:315511..315778TCONS_00009927-exon-sc0000100-1575043694:315511..315778Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1575043694:313281..313435TCONS_00009927-exon-sc0000100-1575043694:313281..313435Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1575043694:307008..307544TCONS_00009927-exon-sc0000100-1575043694:307008..307544Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1510915933:321150..321357TCONS_00009927-exon-sc0000100-1510915933:321150..321357Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1510915933:318103..318266TCONS_00009927-exon-sc0000100-1510915933:318103..318266Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1510915933:317284..317332TCONS_00009927-exon-sc0000100-1510915933:317284..317332Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1510915933:316975..317082TCONS_00009927-exon-sc0000100-1510915933:316975..317082Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1510915933:316575..316652TCONS_00009927-exon-sc0000100-1510915933:316575..316652Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1510915933:315511..315778TCONS_00009927-exon-sc0000100-1510915933:315511..315778Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1510915933:313281..313435TCONS_00009927-exon-sc0000100-1510915933:313281..313435Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1510915933:307008..307544TCONS_00009927-exon-sc0000100-1510915933:307008..307544Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1491911889:321150..321357TCONS_00009927-exon-sc0000100-1491911889:321150..321357Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1491911889:318103..318266TCONS_00009927-exon-sc0000100-1491911889:318103..318266Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1491911889:317284..317332TCONS_00009927-exon-sc0000100-1491911889:317284..317332Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1491911889:316975..317082TCONS_00009927-exon-sc0000100-1491911889:316975..317082Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1491911889:316575..316652TCONS_00009927-exon-sc0000100-1491911889:316575..316652Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1491911889:315511..315778TCONS_00009927-exon-sc0000100-1491911889:315511..315778Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1491911889:313281..313435TCONS_00009927-exon-sc0000100-1491911889:313281..313435Clytia hemisphaericaexon
TCONS_00009927-exon-sc0000100-1491911889:307008..307544TCONS_00009927-exon-sc0000100-1491911889:307008..307544Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100supercontigsc0000100:307008..321357 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0590102	0	0	0	0	0	0	0	0.173991	22.2941	27.5261	41.5202	29.7065	9.76556	13.0256	29.672	22.9127	7.19962	6.9074	2.36402	4.73442	11.3038	6.54956	7.47382	9.52613	4.69069	2.89244
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009927 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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