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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009920 ID=TCONS_00009920|Name=TCONS_00009920|organism=Clytia hemisphaerica|type=transcript|length=322bp
TTTTAATATGGGTACTGATATTACATAACTTTCAGGTTACCAAGTATAGT
GAAGATCATGACTCAAGATACTAAGAATTCTCCAAACTGAATGAGGGGGT
TGATGGTACTCTCAGCAATGACGAAAGAAACAACATAATGAATAACATCg
gagaaaataaatatattctttGATAACTTGCTTGAACGAGTTGAAAGTGA
TTATGTGGGTGATTGTGGTGATTACTATGAGACTTAATATTGTAGTtagt
ttttatcaaatatttaaTTGTCTTCGACATTTTTATCATAACACtattat
taaaaaagaagaataaacttgg Run BLAST on NCBI transcript from alignment at sc0000100:135988..137369- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009920 ID=TCONS_00009920|Name=TCONS_00009920|organism=Clytia hemisphaerica|type=transcript|length=1382bp|location=Sequence derived from alignment at sc0000100:135988..137369- (Clytia hemisphaerica)
TTTTAATATGGGTACTGATATTACATAACTTTCAGGTTACCAAGTATAGT
GAAGATCATGACTCAAGATACTAAGAATTCTCCAAACTGAATGAGGGGTT
TGTAAATATTTCCAATAATAGGGATAAAGTCACAGGGTGTTTTTAACACC
GGAGACGATTCGGGAGGCCTTACCCATCTAGTCCAAGACACGTATATATC
ATTATGGAAGTGAACTCTATCGATATCTACTTTTCCATTTTAGGGTTGAT
GGTACTCTCAGCAATGACGAAAGAAACAACATAATGAATAACATCGGAGA
AAATAAATATATTCTTTGGTAAGTTGACCATCTTTCTCGTTTGATTGATA
AAAAAATTACAAAAAATCAGATCTGATTTGCGGAAGAGCAAAGAAAAGGT
TGCAAAAACTAATAAATGAAGCCCTATAGCCAGTACTGCCTATAGCTATG
GTAGGTCAAGTTCATTAAATTGAGTAGTCTACCCCTAACACCCCTTTCTC
AGTGACCCGGTGAGAGTTTTAAGCTAGTGTGGATAACTTGAAGGTGCTAA
AATTCCAAAAAGGGTAGAAGAACTTTTGTTGTTATGAATATAAGTTTTAG
CTTAACAGCTCATAAGTGCACTGTCCAAAAATTTCAAAGTTTATCTCGAT
AGAGATGGGATTTCGGTGAAGAATTCCCACTAGGGAAGAAATTTAAGGGT
ATTTTTATCACAGGGACAACAGTTGTTAAAAAGTTACTTTTTAGCCGATT
TCTGTACTGGGGAGGGAGACCACCGGGTCTGCAAAGTCTCCTAATTTTTT
ATTCGAGAAAAAGGAGGGAAAATGAAAGAGATCGTCATATTATGATAAAA
ACCCGACAGCATTTTCTCAACGGGAAGAAACATGAGGATAATGTTATCCG
GAGAAAATGTTTCTTGTTGAAAAATTCATTCACATCAAGAAATTTCGGGT
ATATTCACTTGCATTTGCTCGATCATATTTTAAATTACCAAAGTCTGCAA
AACTAACTTTTAGAATACCGTAGATGCACGGTTATAAGTTTTAATTTTAA
AACAAAATCATTTAATATTGCATTTTGAACCTTAGATTTGGCAAAATAGA
GTTAAATTACGAAAAAAATATTTTGGTCAGTGTAATTGAAGGCCGTGAAA
TGTTCCCTGATAAAATTTACCTATGGAATTATTTGTCAATTTTATATTTT
TGTGATTCTTTTATTATTTTTTTCTACTTTAGATAACTTGCTTGAACGAG
TTGAAAGTGATTATGTGGGTGATTGTGGTGATTACTATGAGACTTAATAT
TGTAGTTAGTTTTTATCAAATATTTAATTGTCTTCGACATTTTTATCATA
ACACTATTATTAAAAAAGAAGAATAAACTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009920-exon-sc0000100-1575043694:137273..137369 | TCONS_00009920-exon-sc0000100-1575043694:137273..137369 | Clytia hemisphaerica | exon |
| TCONS_00009920-exon-sc0000100-1575043694:137052..137126 | TCONS_00009920-exon-sc0000100-1575043694:137052..137126 | Clytia hemisphaerica | exon |
| TCONS_00009920-exon-sc0000100-1575043694:135988..136137 | TCONS_00009920-exon-sc0000100-1575043694:135988..136137 | Clytia hemisphaerica | exon |
| TCONS_00009920-exon-sc0000100-1510915933:137273..137369 | TCONS_00009920-exon-sc0000100-1510915933:137273..137369 | Clytia hemisphaerica | exon |
| TCONS_00009920-exon-sc0000100-1510915933:137052..137126 | TCONS_00009920-exon-sc0000100-1510915933:137052..137126 | Clytia hemisphaerica | exon |
| TCONS_00009920-exon-sc0000100-1510915933:135988..136137 | TCONS_00009920-exon-sc0000100-1510915933:135988..136137 | Clytia hemisphaerica | exon |
| TCONS_00009920-exon-sc0000100-1491911889:137273..137369 | TCONS_00009920-exon-sc0000100-1491911889:137273..137369 | Clytia hemisphaerica | exon |
| TCONS_00009920-exon-sc0000100-1491911889:137052..137126 | TCONS_00009920-exon-sc0000100-1491911889:137052..137126 | Clytia hemisphaerica | exon |
| TCONS_00009920-exon-sc0000100-1491911889:135988..136137 | TCONS_00009920-exon-sc0000100-1491911889:135988..136137 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100 | supercontig | sc0000100:135988..137369 - |
Blast
The following BLAST results are available for this feature:
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