TCONS_00009916 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009916
Unique NameTCONS_00009916
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1343

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009916 ID=TCONS_00009916|Name=TCONS_00009916|organism=Clytia hemisphaerica|type=transcript|length=1343bp
agaaagaTGGGGTGGTGACAATtgcaccaacacaagaaaaagTAagaagg
aaagaaaatttgaaatggaaAAATCATCTTCAGATCAATGGAAATGGGAA
CAAGGCTATGACTTCAAAAGAACGGTCGATCCATATCCAAGCGAGTATGA
ATGTGCAATTTGTCGATTTCTGATAAGAAATTGCGTCCAAGTACCATGCA
AAGTTGGTCATTTTTTATGTAAAAGTTGTTTAGAGGGATGGCAAATGAGC
GTTATTAGAATAGATGGAGAAGATAAATTCGTTTTGAAGGATTCgaagaa
attagaaaattttgacaACGAAACGAAAGATGAGGAAGACGAAGAAAGAG
AGGACACTCGGATAAAATGTCCCATATGCTCGTTGGCTTATTATGACAAA
GAAAAGGTAGTACCAGTTCCTCCTATTGACCGGGCTATTTCAAATTTATC
AGTGTATTGCCAAGAAAATGATGATTGTCTTTGGAAAGGCCCAATCAATA
AATATGAAGAACACGTTGAAAATGAATGCGGTTACAAAACAATCCAGTGC
GAGTTGACAGGATGTAGTGCTACTTTTCCAAGAAAAGATCAGAAAGAACA
CGAAAAAGATTGCCCTTATCGTTTTGAAGACTGCAAATTTTGTAACACAG
CGTTTCAATTCATCGAGTTAAACGAGGATAAGCACTATGCTGAATGTGAT
TTGAGACCCATTGACTGCACAAATGAAGGCTGTCAAGAGAGACTTTCAAG
AAAAGAGaTGCGAAGTGTTCACTTGGAGAAATGTTTATTTAAGAGGATCA
AAtgtgattttgttgaatttggatgTCAAGAAGAAATGTTGAAATCAGAG
CAAGATGGTCATGAcaaaaaatttgattcaaaaCATACCAAGTGGATGCT
TCTCTCTTTGACAAGAGAACTCTCGGAAATCAGGAAGGATAAAATCAGCA
TTAAACAAGATTTAGAGGGAATAAAAGAGgagttgaaaaaaacaaaacaa
actctTTTAGCTAAACTTGTTGATGAAGAGGAGTACAAAAAAGAGCAGAA
AAATGTCATCCGAAAACTCATTACTGTTGAAGAACAAAGACTAATGCTTG
ATGATCCTAAGGAGTTATTTCTTCAGCTGGGGAAAGAGCAAAAGGATATC
GACCCAAATCTACTTGAACCGTTCTCATACGAAGGCAAAGAATATGACTT
TGGTAATCAACTTTGTCGCTTCTTGACAATCGGTTATGAGCAACGAATGA
AAATGCTTCTTTCAAAAATGGAGATCGGTGAAATTTATCAAATCGAAGAT
GGAAAAAAAGTGATCTTCAAACTTCAGTTGGTGGAACAAAGAA
Run BLAST on NCBI

transcript from alignment at sc0000100:391023..404729+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009916 ID=TCONS_00009916|Name=TCONS_00009916|organism=Clytia hemisphaerica|type=transcript|length=13707bp|location=Sequence derived from alignment at sc0000100:391023..404729+ (Clytia hemisphaerica)
agaaagaTGGGGTGGTGACAATtgcaccaacacaagaaaaaggtgcgtgt
ctcatggtttctttttttgtttcatggcacaaaaagtgagggaaataccc
aaaaaaaaGACACAATAGTGAgtttaagtaaatcggtaaaatcacgacga
cgaacgaaaatttaacaggctagtgagtttcaacaatttcgtatttccac
tagccCATTACATTTTTCGCCCGTCGTCGTGATTACCCCagtatacttaa
cctcactaatgattttgtccctgggacaatggagcaaaagtGATTCGAAT
CATTGCTCCGTTGTCCCaaggacaaaagtgagatttaaCTTTTATTGGCA
GATTTATCTACTTTATTATACGATTAGAGTTTTTTTACGCCCTTTGTAGA
TAATTCCAGCAGGGGTGACTAGGTTTGCGAATTGgcgtaccttaaaggaa
gaaattttggcgggaatttaatttggcggatggtcgaaaaagttttttca
gagggaatttaatttggcggtgaacttgaaaaattaaattttgcgggaat
ttaGTTTTGCAGATGAAggatatttttgtccaaaaaacaccattaaaaaa
agaaaaatctgtTTTAAGGCCTGATATGGCACACATTCGGGGGAATAAAG
gcgaattttgaccaaatctgccaaattaagttcccgccaaaatgtcTCTC
CTTAAGTGCGTGTCAAAATTAGTCTGGATATCCATACTCTatattcaaac
ttacaccacgcaagcaaaaatcccattagaagctactcattgagaagtgt
ggtatttttgacccagtttaatttgtttacatttcgtTTGAATTtgtgcc
aaaaaagccgttgataaggttagccaatcagattcgcgcacttccaatca
aaacaataatatcacgtgatttcaacaattgtttaacagccaatagtcta
gcatgctagacgacttaactcagtaaaaaataggaagtagaaaacttgac
aggagcatcaatataattattttaaccatatcccgacataaaaatttccc
gctttcaacataaacgttataaacgactggattcccagtctaaacagcca
atagaattttGCGACTAGGATGACAGAAGTTTTCTGTAGGCTATTATCTC
AAACCGTCTGATAATCCCTTCAATATAAATACTTTTCATTTAATGCATTC
AagtaagaaagaaagaaaattcgaaatGGAAAAATCATCTTCAGATCAAT
GGAAATGGGAACAAGGCTATGACTTCAAAAAGACTGTCGATCCATATCCA
AGCGAGTATGAATGTGCAATTTGTCGATTTCTGATAAGAAATTGCGTCCA
AGTACCATGCAAAGTTGGTCATTTTTTATGTAAAAGTTGTTTAGAGGGAT
GGCAAATGAGCGTTATTAGAATAGATGGAGAAGATAACTTCGTTTTGAAG
GATTCgaagaaattagaaaattttgacaACGAAACGAAAGATGAGGAAGA
CGAAGAAAGGTATTACTTATTTTAGTTTTGGGCAGTTTTATTTCCTcaat
acaagctttttttacaagaatagtgtactttggctgagggtgaaCTTTAT
TCTTGTTTTTCTATGTGCGATTATCTAGCAcctaaacgcagaaatttttT
CCGACCACGCNCATTTACTCTTTATTTTAAGTTGGGTAAAAACAATCTAG
AAATTTACAAAGTAAATTCTAATCAAATCCAACTGtcataaaatcaaaag
aaaagatttctaagagaaataggaaaatagttatgattaaaaaattagca
taataataacaataataatgaaATATAAAGCTATGTACAAATATTACAAG
TGCATGTGGGTAAAACATCCTTTAAGCTGGGTGTCCACTGAAAGAAAATT
TGTCCGTCGCAAATGATCATCGCGAAAAAATTCGGCCGtcgccaaaaaaa
atttgatggaCATGTGCCATcgccaatttttttctattttagaaaTAAAA
TTAATCCTTAATAATTGAcgacaaaaaatgaaaacgttttcattttatat
cgtcaatttttttttgtccgtCGTGTATTTTTTGgaggagaagaaaaaaa
acaaaatcctcGTACAAGAACAATCGTGTGAAGGATAATGCTTGGGCGAC
AATTGGTGAAGAACCTGGATACGAATCAGGTACGAACTTctctttttcaa
agtttaaagaTGTCAACAAATTTGCATTTTGGAAGATTCTATTTCCCTTG
TTTCCTGAAGGAACTTTATAAtggtttttagaaatatttcattctccgtt
gaaatgttttttgaaagcaTCCTATGCTTATAAAAGTTTTACAATGCATC
TATTTTTTTTGTTCACAGGTGAAGCAAAAACGGTATTTGTCAATCTAAAA
AAACGATAATGCAAAAGAAAAAACGATTTGAGAAGAGCAACGCATTCCGG
AGCAGGCAGAGACCAAGTTGCCAATTATGAAAATGAGCTTAACAAATACA
GATTCCTTTTTTGGATCGACCCTTAcctcaaaaaaaagaaaatgacacGA
ACGAATTTGAAGCTACCCAGTACTGACACTGATGAAACAGAGAGCCCGAG
TGAAAGTAGTGACGGCGAACTATCGGAAGGTATCGTTAATATGGACCGAA
AAGAGCATCCGCCTCCGTCACTCCCATCAGCACCGGTTAGAGATAATCAT
TTTGAGGAGCTTGTCTCAGAAACCCAACGAGTTGAGCAGCAACGAGTAGA
AGCTTTCAGTTCTAATTGCATCAATGAAAATCTACAAAGTTTAGGAGATA
GGTCTTGCGATTCGGAACTTGAATCTATGCGTAAAGCAGAACGCAGAAAg
caaaagcttaaaaaatctcCGGCCGAAACAAAAGAATCCACTAAACCCAA
AAGAAAAGCTCCGAAGGATGACGTAAGAACTGATCCAAAGAAAAGCAAAT
CCAGCAAATATACCTCTATCGGTGGGTGCTCAAAGAAGAGTGGAAAGGAA
CCGCCAAAGAAAGAAGACCCTTGCACAGATGtattaaaatcaataaacac
gagactcaaaaacaaagaaatccgggaagaaaacaaagagaaaaaatcag
CGCTTTCTAGTAGTGTAGCTCGTTCGGAAACAGAAGAAGATGTTTTGGGT
AAGATGGTATCGCtcacaatgaaaaagttaggtCGACAAcagaaaattca
attcaaacATGATGTAAATAACTTAATATTCCGGTATGAAATGTCGACAG
TCCTAAAAGTACCTCCCGTCTCAAACTGCTCCACCCCTCGAAACGATGGT
CTCTCAGGAGTTGCCCAAGAGCAAACCAAATTTCACTCACGTCAGACAAA
CACACTCGGGAACGCTAGTTCATCTAATGCGCAAGAGCAAAATCAATATA
TTTCCCGCTCAACACCATCTGCTCAACAGACAGTCCCGCACAGCACTTTT
CAAAGTCGTGATCCCTCAATATTGCAAGAGCAAAACCAAGTTAACTCTCG
ATCGACACCCTTGGCACAATTTTTAAGCCCGCTGTCCGATACCCTTCGCA
ACCGTGAATCATCAAACATGCAAGAACAAAACCAAGGTCATTTCCCTAAT
CCCAATATGGCATCGAACAGCTCTGGAAGTCAGTTTGACAGTTCTACTGG
AAGCCAGTTTGACTCATTGATATACTATTAAcaacaaacaaaaatgataa
agaGATAATTCTTGTGTtgtatttgaaaattcttgagtTGTTCAAAAGAA
AACATATGCGAAGTTACATGTTAATacataaaacgaaaaaatataatatt
tctcTAATCTGTTTCCTCCTCGGTTTCACTCTCAATTTCCACTCGACCAT
CGTGTCTTATATAATCAAGTTGCCAGTCCAAAGATCCTCTCTCACTATTC
ACAAAGTCTTTCAGCGAATTACGTAACTCGATGGCAGAGATTTTCCTCCT
AGATCCTTTCTTCGGTTTTATTGGTAGCATTCCTCCGTCTCCTTGAACAC
GTGATCGCCACTCGCCCTCTTTTATTTGACCATCAAAAGTCTCAATGTCA
ATAGATCCGTACGGCATATACAAAGAGTTCTCGGTTTGTCTTAGATAATT
GTGTAAACAGATCGCAGATAAGACAAATCTTTCGGTATTATCAGTTGACG
CTTTTATCGGTCTACTGAAAATCCGCCAACGTGCACGTAGGATCCCAAAA
GCATTTTCGATGACCCTTCTTGTCCTAGAGTGACGGTAGTTATACACGTG
TTCTTTCTCTCCTAATCTACCAGGGAATGGAAGCATTAACCATTCTTTCA
GAGGAAATATTTCATCACCAAGAAGAAAGTAAGGGATATCCATTTCAGTC
CCCGGAACCATTTCTCGACCCGGTACGTTTTGTGTGTTGTTTTCAAAAGT
ATCGAGAATCTTGGAGTAAAGAAGAATTCCGCTGTCATTGTTTGAACCGT
ACTGACCCACATCTACAAATGTGAAATTATATTTAGCATCGCATATAGCC
ATTAGTACTATActaaaaaaacctttgaaattaTGATGAAGACTACCAGA
ATTAGGAGGTGCTTCGATCATTACATGTTTTCCGTCGATTGCCCCGAGTA
CGCGAGGAAATTGCCATAAACATTCAAAATCACTAGCAATTTTTCTCCAC
TGATCTTGATGTGAAGGAACAGTAACGTAGGAGTCCATCAAGACTGAAAC
CAACGCCTCAGAGGTTTCACTAAGTATGCGACTTACACTCTTCGGTCCCA
TTCTAAACAAGTACGTCAACGATATCTGTGAGTCTCCAGATGCAAGATAA
CGTATTAGTAGCATGAACCTTTCAGCTGCAGGGATAGCTTTTCTGAAATT
AGTATCTTTCTTCTTAATCAAAGGACCCACGAGGCTGAGAAGGTGATCCA
TTCTTCCTGGTGACATTCTGAAGAAACTGAGAAAAAAGCGGAAAATTAGT
ATCAATCAAATTACTTGTTCGAATCTTCTATAAGNttgataaggttagcc
aatcagattcgcgcacttccaatcaaaacaataatatcacgtgatttcaa
caattgtttaacagccaatagtctagcatgctagacgacttaactcagta
aaaaataggaagtagaaaacttgacaggagcatcaatataattattttaa
ccatatcccgacataaaaatttcccgctttcaacataaacgttataaacg
actggattcccagtctaaacagccaatagaattttGCGACTAGGATGACA
GAAGTTTTCTGTAGGCTATATATCTCAAACCGtctgataatccctttaag
ATAAATACTTTTCATTTAATGCATTCAAGTAagaaggaaagaaaatttga
aatggaaAAATCATCTTCAGATCAATGGAAATGGGAACAAGGCTATGACT
TCAAAAGAACGGTCGATCCATATCCAAGCGAGTATGAATGTGCAATTTGT
CGATTTCTGATAAGAAATTGCGTCCAAGTACCATGCAAAGTTGGTCATTT
TTTATGTAAAAGTTGTTTAGAGGGATGGCAAATGAGCGTTATTAGAATAG
ATGGAGAAGATAAATTCGTTTTGAAGGATTCgaagaaattagaaaatttt
gacaACGAAACGAAAGATGAGGAAGACGAAGAAAGGTATCACTTATTTTA
GTTTTGGGCGGTTTCATTTCctcaatacacgcttttttataagaatagtg
tactttggttgagggtgaatgttattcttatttttctatgtgCGATTATC
TAGCACCCAAATGCAGAAATTTTTTCCGACCACGCTACAGGTTTTGAAGG
TCGGAGAATTATTTGACATCTGCTCGGCCCGAGGGCCGTCTGACTTGGGA
TACTACACATCAAAAGACTGAAGGTGTTTATTCGACTTAGGTTGATTAAT
GTATGGTCAACAATATGAATATTCATTAGCTCCACATTCAAAAACTGTAG
GTGTAGGTTTTTTGGCATTATTGACGCGGAAACAATtaggctgggcttaa
aaaattgttggtttgccgtcacccgaccctagctTTTGGAgttgggtcgg
tcggtcggaatttatttttattttggcgatttatgaaattttcgtccatg
gaagggttaacgatttgtttacatttaggtaattttgaataaaaaacaga
agtgctagcagggaatttacgattcttatgcttgagacaaacaagatact
agttttgattttttattgtttgaagtttttgaaggaaaaaaaatcttctt
tagaatggcaataaaattttttgggtcggcaggtttcgaggtagggttgg
tcgggtgacggcaaaccaacaattttttaagtccagccttagTTTAAACA
CATTCTCCGATAATCTTCATCATAGTACCCGTCATATTCATTAATTTGTT
TGACCATTTATCACCGGCTAATgcccttcaaaaattatggtaatttccCA
GTTTTTGGGANCCGACCACGCTACAGGTTTTGAAGGTCGGAGAATTATTT
GACATCTGCTCGGCCCGAGGGCCGTCTGACTTGGGATACTACACATCAAA
AGACTGAAGGTGTTTACTCGACTTAGGTTGATTAATGTATGGTCAACAAT
ATGAATATTCATTAGCTCCACTGTAGGTGTAGGTTTTTTTTGGCATTATT
AACGCGGAAACAATTAATTTAAACACATTCTCCGATAATCTACATAATAG
TACCCGTCATATTCATTCATTTGTTTGACCATTTATCACCGGCTAATgcc
cttcaaaaattatggtaatttccCAGTTTcccatgccataacttacctga
gttaCAAATTTCCAAGAGGAGGTCCAGGGAGGTCcaaatttcctaggaaa
taagTACTCGGGAGTAAAAGaaccaaaattaattttctacATTTTCTTTG
CTTCGTTATAGAGAGGACACTCGGATAAAATGTCCCATATGCTCGTTGGC
TTATTATGACAAAGAAAAGGTATACAAAgtcttttatatattttaatatC
AGAAGTTGAAGTATTACCCATAGATTTAAGAAGCCAGAAGggaatcctac
ctaagtcacgtgatacgacgtgatattacaatagaatttcagcgcttgac
caatcagaagcttcatGGGTTTTCacaaacaatagcagcaatattttttc
agATATTCAATTGTTTTTGCTTgcaatggcttaaagcacgacatctagcc
cttcgggttttataaatctatggtattACCAGGTCACCGTAGTTTCACTG
TCTTATGATTCTGATTGTCTTTCAAATTCTTTTATCCGTCAAATTATTCa
ccttggaaatatctttccaacgatgtatGACTTTATAACATACAGTAGCA
TGAATGGGTGGTGAGAAAATGCTACATACTTTTGAGATAGACTTTAGATC
GGCTAAACACATATTAGGGACGAGATGacgtttttacaagctcttatttg
atttggttggtcgttaaccagtaatagaCCAGAAATTAAATATTCATGAT
GTTGTGTCTTTTTGGCACCAAATTATACAtactggttgttgaaatacaca
ttattagcgcttTTTCCATGCCAGTTTAAcattttaaaagtaataatCTG
ACATTTTTTGAGGTTTCTCCGATAAGAcgtttcaaaatttccattgggac
ttcgtttcgcggatgacacccaaatctgcgaaattaaCTCCCTGGCGAAA
ATTTATCCCCTTAAGGTAGTAAAACAAAGGACAACAACctatttcttttt
gtaatttcttGTTTATATTGTACATTATTAGGTAGTACCAGTTCCTCCTA
TTGACCGGGCTATTTCAAATTTATCAGTGTATTGCCAAGAAAATGATGAT
TGTCTTTGGAAAGGCCCAATCAATAAATATGAAGTAAGCAAGCCtatttt
gaatattatttttatttcattctgtacccagctggcacacaacgttattt
caacgtttatcaacgtccatataacgttagatgaacgttgaaacagcgtT
GTGTGCCAGCCGAGTTGTTCTCAATTCATTCAAGATACCAAGcgaatacc
ccttaaaacctgcAAAAAATAGAGGTACCATCTATCTGAAAATTTAGTTG
GAatttgaggctgaaactttttgcggTGTCGACATACGCTGTCTATGGTT
TTCTTCCCTAgcagtgatgttttgtagaaaccagttttcagtttttcacg
agGAAGTGAAAAATAAATGCGCCCTTTTTAGCTATTTACTCCTTAAAACC
TTCAAATTGCTTTTTCTTGGAtagctttttataaaatagtcgtctcaaat
tttgaacactcACTGTAAAGTTACTATCCCAACTGTcacacagcgttgtt
tcaacgttcatctggacgttgtgaacattagtggacgttaaaacaacgtt
gtgtgccagctgggatgttacaattagatcattggtacctaaatattttc
aaaacagtattttaaaatcaaattacaccttaaaaAACCTACAATagtac
accttaaaacctacaaacattgACCCCTTGCATACAACCCTATACAACTT
ACTTACTGAAactgtgaaattgcaattcaggCGCTGAACCGTGATTtaat
tgatcaaatacttgctagaaatccATATAGGATTTCATACCCATAATTCA
ATTGCGcctatttttgtcaaaaaacgaCTGTTTGATGAagggtcaaaact
tttattgacttcatttttgacgtatggtactattgtttttctaattttcc
atcaaatttgtgacattttggtatgtaatatgaccatgttttgagaaagt
tCATCTTCAGATTTAGAACTTTGATGGCTTAACGATATCTTTATCAATCT
TTTGTCTAACCATTAAGAAGAGAATTGTTTCATACTTACATGTATAGgta
cctaaaaagtataggttttataaCATTAAATTTAACTGTGTAATCTCTAG
GCCcgaaaaaacttgatttttggaagagattaaaaaaaaaagcgaaTGGA
CTTTATTTAgagtacagtatatggcccccaaaacgaagacggcccccaaa
acggaggtcgtcattaaaatgaggattctgacttgtaaAAAAGCGAATGG
CCTTTATTTAGAGTAGAAACTTTTACAAAAGTTGACCAAAATTGACTGTT
CTCTTTTTGTCATCTAGGAACACGTTGAAAATGAATGCGGTTACAAAACA
ATCCAGTGCGAGTTGACAGGATGTAGTGCTACTTTTCCAAGAAAAGATCA
GAAAGAACACGAAAAAGATTGCCCTTATCGTTTTGAAGACTGCAAATTTT
GTAACACAGCGTTTCAATTCATCGAGTTAAACGAGGTAAAGCCGACTCTT
GTATCTTACTTatattaccctgagtatcagaggttaagttttcaaNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNatcgactatgacgctcatccaagatcttggatggtcgtcatggttac
ttttgtcttcgctgattgcgcgatgaatagaatctcgattcgtcggcaca
gcgtaaatacatgattttgagctgtgcttttcacggtatacTTATATCGC
TTAGTTGTATACTCTGTGCGAATTatctgtttgaaaaaaaattctgcgAT
GAAGTTGTGGGGGATCAACTTTTGTCCTGGAGGGGGAAGTGAGTATTTTC
ACCTTGAGGGGGACTAAAATGCAAAATATGGGGGATTTCCATCCACAACT
AAATGTTTGACTTGAACAAtcgaattcaaatccccagccataaaaaaaaa
cGTACATTCCCATCGAGCTTTAGCTCgtaatttttacccccacttgCTGA
AAGaccctaccgggtctgtgagagggGGATGTGACTAGGACTAGGAGAAA
AGACTGTTTCATTTAACTTTTGTTTATACTTTCAGGATAAGCACTATGCT
GAATGTGATTTGAGACCCATTGACTGCACAAATGAAGGCTGTCAAGAGAG
ACTTTCAAGAAAAGAGGTGAGACCTTCCTTTTTAGACATTTCCAGCttgt
acacaacgttgttttgacgtttacCACCCACCCAAAACCTTGCTACGGGA
GAAgatcaaaataaacgaaaatgattgctACCATCTGTTAGtgatcgtac
tgacgtcggtatAATTTTTCTAACTTCAAGCGGcagtaccaatcattttc
gttaaTTTTGACTTGATTGAAGGGACTACAATAATTGTTCGAATTGATGA
gacagaggttcgagttaaagggaATTCACTGTTATGTTGAAAATTACCGt
caaggggccgtccacatagtacgtacgcactaagggggagggggtcttat
tctaaaaagcgtatgcttgcgtacatggggaggggaggggtcaaaggaaa
atgtaagtacgcagagaaaaaatttttcatagctcttttttgcttgtttt
ttttgtcgacttttacgcttcttatacacatcaagaggaaaagaaaaagt
ttcttaattaACATTgggtttcatgtatgaaataaaggtccgaaccaaac
gatttgaattcgaaattttcttcaaccgagggcccccccccccgcttaat
gaaaaagtacgtattTACCaggggggtatagccatttgctaacgcttgcg
tacagggggggggggtactcgatttttgacattttagtgcgtacgtacta
tgtggacggcccccaaCAAGAAACTCGAtttagaagaagaaaaaaaaagc
attttatttGTAACTGTGGTCTGAGTAATCATTTTACCTAAATTTTATTC
CCATAAGGGGGGGGGCACTTGGTCCATACTACTATAAACGTTActataat
tcaaaatttcctcgaacaaattttttttacccgtgCGTGCTCGAATTTTG
GAGTCTTTACTGTATCAAATAatagagcgtatcgaatagtagaacgtcga
gtTAGAGACAGTCAACTGTGTATGAACTCTCttcagattttctttttttt
gttttcttcagaTGCGAAGTGTTCACTTGGAGAAATGTTTATTTAAGAGG
ATCAAAtgtgattttgttgaatttggatgTCAAGAAGAAgtatatttatt
attttgcggcatgacattttttgaaaatcctaaagtaataagttggagat
atttcacagaaaagtgctaccaaggggtatttcgggtcccatatcttccg
aaggacttttctgtttgccttgaaagttaacaaacttcttaacctaaggt
tgaactaccactgatgtaaaaatgaacgttatagcataagtagaaaaaaa
gctcaattttttgctgtcgcaaatttaaccactaaaaatcgcgaattttt
caaccaaaaatacattcaaatatagcgcttttgattctctaaaacaagca
aaaaaaaattccataattatgtttgactatcaaaagttacaggcattttt
gtttccactgccagttatatctggacagactttaagtCGTGTCAGCCTTA
TACCCTCGGGTACCTAATGTAAAACGGGGGATTTGGAATAGGGGGGAATT
GGGAAAATTGTTaaaacttaagggctctgaccatagtcgaaaaattgatt
ttagtatatgaacataaaaattttgttttaggttctttaacacttttaac
aaataattgcctttataaattgctttttaatcaaatcccctaagagtaat
taagaatttaattgcaaaaatgacgttatgactTATGagctttaaaaaga
cgttagtatgttgcatcaccttcttttataaaaagtgctaagttttaatg
ggtgattaacctttttgtttcgaaattttttcaaactgtccgcaaagaat
tgagctgttataaatttttcggaaaaattttctaacttatataatgcatc
aaaagttatagctgtttttctatgaaaaattggtcaaaaagcactatttt
caatattttgagacaaataagcttttacaaaaattttccgaatcTATTGg
tagtttggttaaagatacaccatctagtgccaaaatcttttccaaatgtt
tttttttcgccgAAACTAAGGTCCTCAAAGTTAAAATAGTTAGTCTTCGC
AAATgtctttatttctttttcatcaaattttttcaatgcattttttgaat
ttttagatttaggaatagttggcctaacagaaaaagtacaacatgccata
gttttgttggttacatcagtcagaaaaacacaatttatacacgacaatta
tgaaaaattcactatggacAGAGTtcttaataagcgggggagggTTGGga
taaaaatggaaattttttgaaacattaatTAGTGGGGGAACGCTTATTAG
GTACCTAGAGTAATTTTGAGCgtttatgcaaaaaaaaaacacaatataAT
GTTATTCAATTTTGGGAATTCTAAGCAAAGTTTCAAACATTTTGGTTGAA
AATTGGGAATTTAGGACTTCACTGGGTCGAAAAACTGTCAAAGAAGgtgc
ataattttttaaatttagtctTTCTCGCAGTGTCGATCTTCGTACTTTGT
CACGGGTGCCCTCATGTCGTAAAACCTTAAGCTTTGGCGATTTTCACGAA
AGAAAAtgcatttgaaaattcttaacaaggtgattcgcgaaagtttattt
tttcttcGAACTCGCGAAAGTAAAagcaaaatttcgcgaattttcgacct
cgcgaaagtttctgtcgcgaaagtttgtacgtcaAACCTAGTACTCCCCA
GAACACACCACGAGCATGATTTTAataaatgttctttttttctctgCAGA
TGTTGAAATCAGAGCAAGATGGTCATGAcaaaaaatttgattcaaaaCAT
ACCAAGTGGATGCTTCTCTCTTTGACAAGAGAACTCTCGGAAATCAGGAA
GGATAAAATCAGCATTAAACAAGATTTAGAGGGAATAAAAGAGgagttga
aaaaaacaaaacaaactctTTTAGCTAAACTTGTTGATGAAGAGGAGTAC
AAAAAAGAGCAGAAAAATGTCATCCGAAAACTCATTACTGTTGAAGAACA
AAGACTAATGCTTGATGATCCTAAGGAGTTATTTCTTCAGCTGGGGAAAG
AGCAAAAGGATATCGACCCAAATCTACTTGAACCGTTCTCATACGAAGGC
AAAGAATATGACTTTGGTAATCAACTTTGTCGCTTCTTGACAATCGGTTA
TGAGCAACGAATGAAAATGCTTCTTTCAAAAATGGAGATCGGTGAAATTT
ATCAAATCGAAGATGGAAAAAAAGTGATCTTCAAACTTCAGTTGGTGGAA
CAAAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005561XLOC_005561Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009916-exon-sc0000100-1491911889:391023..391064TCONS_00009916-exon-sc0000100-1491911889:391023..391064Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1510915933:391023..391064TCONS_00009916-exon-sc0000100-1510915933:391023..391064Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1575043694:391023..391064TCONS_00009916-exon-sc0000100-1575043694:391023..391064Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1491911889:396352..396657TCONS_00009916-exon-sc0000100-1491911889:396352..396657Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1510915933:396352..396657TCONS_00009916-exon-sc0000100-1510915933:396352..396657Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1575043694:396352..396657TCONS_00009916-exon-sc0000100-1575043694:396352..396657Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1491911889:397934..397991TCONS_00009916-exon-sc0000100-1491911889:397934..397991Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1510915933:397934..397991TCONS_00009916-exon-sc0000100-1510915933:397934..397991Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1575043694:397934..397991TCONS_00009916-exon-sc0000100-1575043694:397934..397991Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1491911889:398804..398905TCONS_00009916-exon-sc0000100-1491911889:398804..398905Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1510915933:398804..398905TCONS_00009916-exon-sc0000100-1510915933:398804..398905Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1575043694:398804..398905TCONS_00009916-exon-sc0000100-1575043694:398804..398905Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1491911889:400190..400357TCONS_00009916-exon-sc0000100-1491911889:400190..400357Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1510915933:400190..400357TCONS_00009916-exon-sc0000100-1510915933:400190..400357Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1575043694:400190..400357TCONS_00009916-exon-sc0000100-1575043694:400190..400357Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1491911889:401358..401438TCONS_00009916-exon-sc0000100-1491911889:401358..401438Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1510915933:401358..401438TCONS_00009916-exon-sc0000100-1510915933:401358..401438Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1575043694:401358..401438TCONS_00009916-exon-sc0000100-1575043694:401358..401438Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1491911889:402434..402511TCONS_00009916-exon-sc0000100-1491911889:402434..402511Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1510915933:402434..402511TCONS_00009916-exon-sc0000100-1510915933:402434..402511Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1575043694:402434..402511TCONS_00009916-exon-sc0000100-1575043694:402434..402511Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1491911889:404222..404729TCONS_00009916-exon-sc0000100-1491911889:404222..404729Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1510915933:404222..404729TCONS_00009916-exon-sc0000100-1510915933:404222..404729Clytia hemisphaericaexon
TCONS_00009916-exon-sc0000100-1575043694:404222..404729TCONS_00009916-exon-sc0000100-1575043694:404222..404729Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100supercontigsc0000100:391023..404729 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.12628	2.50168	0	0	0.464093	0	0.744115	0.771943	0.738183	0.914359	0	0.184547	4.64433	2.80575	13.228	9.18638	2.81065	2.27227	2.0952	0.84683	2.09121	2.12447	1.36827	0.440989	3.01562	2.96784	0.407537	0	1.08032	1.08517
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009916 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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