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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009915 ID=TCONS_00009915|Name=TCONS_00009915|organism=Clytia hemisphaerica|type=transcript|length=3298bp
AAAACATGTAAACTTTGATTTAGCCGGtttatttacgttttttacGTCTG
GTTAACATCCATTCAACATACATATACTGTACGCTTCACTTGATTGACGT
CATTATAGCGTTTCAAAAGCGTTCGAAAAAGAATGGTTGATCAAAAATAT
GAGAGAATGTGCAGCAAATATAAACATTATAGTAAAACGAGATAATATGC
CGTTGTAGTTATAGTAGTATGGAAGAACTTTATCATTTTTCTCGAAACTC
TTTATCGTAAACTCGTAAATTTATTTGCGAAACTATTTCTGATAATTAGA
CTATACATAGCGgATCCATAAAAGCTTCATTTGTACTTGTATTAACACTG
GTTAGATTTAGAAACTCTCACTGAATGAATGGATTTTGCTAAATTCACTG
CGATATTGGACTTGATTTATATTTGAATTGAGAATCTTATTGGTTGGTTA
GACTTGAGCTGATTTTTGGATTGCATTTTTGCTTCAAAGGCTATTGCATC
GTGGTCTTAAATTGGAAATTAATGGAATGatcgaaaatttttaaaataac
tcAAACTTCGAAGATGTATACAAAACCTCACAACGAACTAGACTGGACTC
AAACTGGAAAATCATCATTACTAAAAGATCCAGTCTACAAAGATGAACTT
TCTTTGCGCTTAGAATCTTACAATTCAAAGATGCGAAATAGTTTAATACA
ACATCCAGTTATATCACCGACCTCAACTTTCCGCACTGACATCTCTGGAC
CGGTTGGACATACAGAAACAATACCGAGactggtcATTACGTCACCAACA
AAACCCATTCCGGTTCAAAGtccaattgatgacgtcaggaGTGCAGCCAT
AGCGTTAACTTCACTGTCTCTATCACCGGCAAGTCTTCCATCAACTTATG
AAGAAGTTTCAGCACGTCATAAATTTGCTTTCCCACCTCAAAACACGCCC
ACAGAAGAACCCATCATCCCGTTCTACGCCACGCAAGAAAGGGGCGGAAA
TTCACCTCGCCCTACTCCACCATCAACTACGCCCCGATATCGAAATCGTG
CTTACAGTCATATCTCAACTAATGAAAGGCTCTTAGAAATCTTACCACCC
AAACCTAGAAGCTACTCAACAACTCGTGATTGCTTCAAAGAAATCGGTTA
CCCACCCTATGAGCGGCTCACCAAACAGCGGAGTCACTCTTTCGATGCGG
TTGGCCGATCACATAATTACTACAAAGGAGAAGAACACCCAACGTATTAT
TCACCTCCATCGCAGAGGAAAATCTCCATCGATGAGGGAATAGGGACGTC
CGATGGAGGGAGTATCGAATCACTTGAAATACCGGTCAGCTCGACTACCA
AACGAAAGATTAAACAACACCAAAGAAATGGTTTTCGTTGTATGTGGCGT
GGTTGTGATAAAGAATTTACGACATTAAACGGTATCATTCTACACGTTCG
GCATTCTCATATTGGGGTTGAACGGGCTGGAGAAGAAGAGTTCTATTTTG
ACGACATCGAAACTCAAAATGTCATTATGACGTCACCGCCTAAAGAAAGT
GGACACCAGTCCCATCACGCCCCTATAATCGTATCAGCCAATCAAACCAA
AGCATTCAAATTCTCAGAAGCAATTTCAATCCCGAGGAATCCGGAACCGA
TCAATATTCCGTATCGGGACCAAGTCAGGATACCTGAGACATCCATAAGT
GGCAATACTGGGGAAACTTCTAAGCCTGTATCTGTCATCCAGCCGGTGAT
TGCGGCTTTGAAACCTATGGAGTTCCAATTTAATGATGAAGTCAAATTTC
CATACATGCAGAATTCTATGCAAGGGCTTAGTCCGGAGACTAAACATAGA
CGCCGGAAACATGCAGTCGGTAAAAAGAAATGTCGGAAAGTATACGGAAT
GAGTAATAAAGACTTGTGGTGTACTCAATGTCGTTGGAAGAAAGCTTGTG
CAAGATTCTCATGAATTGCGCTTTAGTAAAATGCCATGGTTCAGGTCAAT
GAAATATAAGCCCGAAGGCTAGAATTGAATCTcattggtaggatttgaag
ccaacaaatcctaccaaagttgcgcggccttgagcgatctgcctggtttt
tacacaaatgacagattgaaactaataattaccgcttaatttcaaaaaaa
atatctcacaaaaacaaaggaattgctagattcaatccgtcatcgaAAAT
ACGGCATATATttcaaggcttcactttttcttgcctcagaaaggttaaag
attctcctctagcccttcgggctttaaactcaatgattaCGCTTTAGTAA
AATGCCATGGTTCaggtagacgatgctatcgtccgtttagaggtcagtaa
acgcgggaaagaaTTAGGGCGCCAGGGCGGTTTaagggaaaaaagtggcg
gttgagtttggaacactgtaaacatctccgccactgcttactccacccga
atttattaCGCCTCttctaaactattcccttttttagtgatcttgtgtag
atgATAGGATCGTCTATGATTCAAGTTGCTGTTATGAGACTCAAAAGTAC
ATGCTTGATGATACATAACAGATTCTTGATtattaaaacttttcttttat
tcgaatctttctataattcgaacttattcccagtccccgtcaaggagaaa
ctcTCTTGATTAtattctctataattcgaactctgTTCGAGTTTCACGCG
GGTTGAGCGTTTCGGATTGGAAacaagtggcttcatttccaaTGCAAGTG
TTCCATGTTCGAAATGTCTTATCCCTTCAGGGCTTTAAACTGAATGCCAC
AAAATTGTGTCATCTTGAAACACGATATTTGAACAACCAAACTGAAAATG
TTGAAGGTTGAAGGTAGTCTTACATACTTAAGAAATCACTTAACTACCTC
TTAACAATTTCTTAAGTGCTGTGGTGCAAATAGACGATATCCGcttcaca
tgaaaactcagatttgacccccgagaatttCCCACAATGCGgaaagttca
cggtgaaatttttccgcacaaagcattgtggggaattctcggggggtcaa
atctgagttttcaggTTAAGCCGGTACAGTCTATTATTCACAAACGTATT
CGATTTTAATTAATTGAGTATTGTAAATAATAGACGattgtaaataattt
ttaaatccGTTTTATGGATAAACATTTTAGTTAAATACACAAACTGTCTA
AATTAGTTTCAGGAGCctacttttctcaggattgaatcatagaaatcttt
tgatttttggtacaaaggtgcaaaatggtggtggccaaaatgtgacgg Run BLAST on NCBI protein sequence of TCONS_00009915-protein >TCONS_00009915-protein ID=TCONS_00009915-protein|Name=TCONS_00009915-protein|organism=Clytia hemisphaerica|type=polypeptide|length=466bp
MYTKPHNELDWTQTGKSSLLKDPVYKDELSLRLESYNSKMRNSLIQHPVI
SPTSTFRTDISGPVGHTETIPRLVITSPTKPIPVQSPIDDVRSAAIALTS
LSLSPASLPSTYEEVSARHKFAFPPQNTPTEEPIIPFYATQERGGNSPRP
TPPSTTPRYRNRAYSHISTNERLLEILPPKPRSYSTTRDCFKEIGYPPYE
RLTKQRSHSFDAVGRSHNYYKGEEHPTYYSPPSQRKISIDEGIGTSDGGS
IESLEIPVSSTTKRKIKQHQRNGFRCMWRGCDKEFTTLNGIILHVRHSHI
GVERAGEEEFYFDDIETQNVIMTSPPKESGHQSHHAPIIVSANQTKAFKF
SEAISIPRNPEPINIPYRDQVRIPETSISGNTGETSKPVSVIQPVIAALK
PMEFQFNDEVKFPYMQNSMQGLSPETKHRRRKHAVGKKKCRKVYGMSNKD
LWCTQCRWKKACARFS Run BLAST on NCBI transcript from alignment at sc0000100:374779..383202+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009915 ID=TCONS_00009915|Name=TCONS_00009915|organism=Clytia hemisphaerica|type=transcript|length=8424bp|location=Sequence derived from alignment at sc0000100:374779..383202+ (Clytia hemisphaerica)
AAAACATGTAAACTTTGATTTAGCCGGtttatttacgttttttacGTCTG
GTTAACATCCATTCAACATACATATACTGTACGCTTCACTTGATTGACGT
CATTATAGCGTTTCAAAAGCGTTCGAAAAAGAATGGTTGATCAAAAATAT
GAGAGAATGTGCAGCAAATATAAACATTATAGTAAAACGAGATAATATGC
CGTTGTAGTTATAGTAGTATGGAAGAACTTTATCATTTTTCTCGAAACTC
TTTATCGTAAACTCGTAAATTTATTTGCGAAACTATTTCTGATAATTAGA
CTATACATAGCGGTGAGGAATTATTCTTTTTGCGGCATTTTACATATGTT
TTGTTGTTGCGCTTTTTTTCGAATCGTCGAATGTTagttactttttaatt
tttggcgGGAACTCCATGTAACTACTATGGgtacatttttattcaaattt
tacagCTTTTAAATCTTGATTTTAAGGTTACTCTTCCGAGCTTGGAAATC
TATTTTGGAAATATCGTTAACACTCCCTAATTCGAAGTCCTAATATTCGG
TACGCCACATCCAATTCCCCTTGCCTTATAGATATCAAATTTCAACTGTA
TTTAAATCTTTCCTTTTTATATAGGATCCATTAAAAGCTTCATTTAGCNG
CCTTAGATATCTAATTAGAgggcgtcaactgtatttaaatctttcttttt
ttacaggATCCATAAAAGCTTCATTTGTACTTGTATTAACACTGGTTAGA
TTTAGAAACTCTCACTGAATGAATGGATTTTGCTAAATTCACTGCGATAT
TGGACTTGATTTATATTTGAATTGAGAATCTTATTGGTTGGTTAGACTTG
AGCTGATTTTTGGATTGCATTTTTGCTTCAAAGGCTATTGCATCGTGGTC
TTAAATTGGAAATTAATGGAATGatcgaaaatttttaaaataactcAAAC
TTCGAAGATGTATACAAAACCTCACAACGAACTAGACTGGACTCAAACTG
GAAAATCATCATTACTAAAAGATCCAGTCTACAAAGATGAACTTTCTTTG
CGCTTAGAATCTTACAATTCAAAGATGCGAAATAGTTTAATACAACATCC
AGTTATATCACCGACCTCAACTTTCCGCACTGACATCTCTGGACCGGTTG
GACATACAGAAACAATACCGAGGTAAAATCTTTAAGATGTATTTATTAAA
CAAgtcttaaagggataatcagatggttagAGGTATTTGGCCTGTAGAAA
CCTTCTATGGTCCTGGGtaaaacctccaaattttttTGTCCAACTATTTT
TCTAAAGTATAGATATATTACAAagtgaaatttctaaaaatggtCTCTCA
CACAACAAGTCAGAAAATTCTAAAtctcaacttttgaaaaatagttaggt
agaaattttttgagattttgctcagGGTAATAGAATGATTCCACGtgcta
aatatctcaaaccatctgattatccctttgaTTGCCTGACCAGATAGATA
CGACCTTTTCTCTTGCCAATATTATCTAGATTTATAATCTAGTCTGCCAA
CAAGTGATATGAGTACCCCTCGTATAGTATAGAATAATTTTAAccaatgt
gtattttacagactggtcATTACGTCACCAACAAAACCCATTCCGGTTCA
AAGtccaattgatgacgtcaggaGTGCAGCCATAGCGTTAACTTCACTGT
CTCTATCACCGGCAAGTCTTCCATCAACTTATGAAGAAGGTTGGTTCATA
TTTACTGTAAgaacaccctcttctcacagacccggtaggatttgttcggc
cagtggggataaaaataatggagtgaaactcgatggggattgaatttccc
atatttttatggctagggatttcaatttttttgttttcaagtcggaaaat
tcagtggggactggtggggatgggaaaaatatcataatattttgcaatga
ggattggtttatttgattagcTACAGTGGGGACAAacattagagtataat
tttccatcggggacgatgttttggccaatttttccagtgggaagggctcc
cagtgggtctgtgagaagaggatgtgtaaaagtacaaaatttcaaggtta
GGACATTATCAGTGGcctaaaatgaccaaaatgaccagaaacagcaaaaa
agcaaaaaagtctGATGTCGTGATTTTTTACACTGAAGAAGAAATCTTCA
TTCTGTTCGTCTCCATTTTTCTTCCTCATCTTTCAAGTTTTCAAAAGTCT
TTAATCTATTAAATTATtctccttggaaatatctttccaaccgtGCAAGG
ATTTTTAGTATAGCATTAATAGATattgataaaattcaaaattaaaatgt
cCACATAATTTTAAGAAAGCCTTTAGGAAACTATATCACCAAATTTTACC
TTTTTCACACTTTCACCTAGCTTTATCTTTCTTCTGGCATGTTGACAAGA
CTAAATAAGAAAGGATACGgcaaagaaaatcaaacttGTAGTTACAATGA
ACGTCTCACTGTGCAAATTTAATATTATTGAATCAACGTTGGGCTCAAtc
tcaggaaaatttcattttcaatgtaaTAATCTGCATTTTGTGCAATTCAT
GTATCGAACGTAACTTCTAAATCCTTTGTTGTGAGCTTTACATTTGTGAT
TTGTGACGTAAACTACAAGTTCATCACACGTTTATTTTCAAGTTTCAGCA
CGTCATAAATTTGCTTTCCCACCTCAAAACACGCCCACAGAAGAACCCAT
CATCCCGTTCTACGCCACGCAAGAAAGGGGCGGAAATTCACCTCGCCCTA
CTCCACCATCAACTACGCCCCGATATCGAAATCGTGCTTACAGTCATATC
TCAACTAATGAAAGGCTCTTAGAAATCTTACCACCCAAACCTAGAAGCTA
CTCAACAACTCGTGATTGCTTCAAAGAAATCGGTTACCCACCCTATGAGC
GGCTCACCAAACAGCGGAGTCACTCTTTCGATGCGGTTGGCCGATCACAT
AATTACTACAAAGGAGAAGAACACCCAACGTATTATTCACCTCCATCGCA
GAGGAAAATCTCCATCGATGAGGGAATAGGGACGTCCGATGGAGGGAGTA
TCGAATCACTTGAAATACCGGTCAGCTCGACTACCAAACGAAAGGTATGA
TCTACTTTTTGAACCAACTTTGTCCCTGTGTGTCCCAGGTTTTATTTATA
CTACtaatggacgccagagaattatctggcgctatcagtaagcatcgcAA
AGTTtaactaccgggtgcgccacaaaaaagtttctctctttgaaactaat
tttctcgaaatctaaaaattttaaaagaaccattcctatttcattggaaa
gaagaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacttttctattcaatt
gagcataacttttgatctaatgaatcaaatttaataaatgacccatcaaa
atttaagtctatctttcttctttccaatgaaataggaatcgttcttttaa
tatttttagatttcgagaaaattagtttcaaagagagaaacttttttgtg
gcgcacccggtacaaaACAAAAGGTAAGAAGCGATGATGGCCGAACGGTC
TAAGGCCTAAAAACTAGGGGTTTCCAGCTCACGGTTAGCTGAgacggctg
gccgtggaccccgcgAAAGAAAATCGAAGGACTGTTTTCAGTCCTATATG
TCCTACATTTCTGGGCATCCACAttaaatatcgactctatccaTCTATAA
ATGCTACTACTTTTTGGACCATATGCCTGGAGCTCTTCTGAATCAGCTGA
ATGATGTTgatcaaaatgatcaaaaatactcacaaaatagtcaaataaga
acatgtttagaacatttttaggtttaaaactcaaaaagttaagaacatcc
gaaggctgaaaaaaatttggatgttcttatgaaaaagatgtatatcataa
ataaaatgTTCAACTTAAAGGTACTTTAGTTCGAATTGTAGAGAATAAGA
AAGCCTTGGACTACTTTTCACAGTTCCTCTATTTCAGACGGGTTTCCGTC
TCAGTGAGGTATGAAAAGAACTCCCCCCTTAAATTTGcaaaaagttaagc
taaaatattgaaagatCTGATCTGGGCTTGTTTGTCATGTTGATTATATT
TTCTgtctgaaatgaaaaatttcgcTTAGACCACGGACTGTAATACGGGG
CACTACTACTTTTCTAGAAAGGGTTTAAGGTTTAGGGTTCTTCCGTCAAG
AAGATATAATAGCGCCCCCCACCTTCGGGCCGCCCTCCGACtgtggtcgc
aaacttactttaTTACTTTTACTTTACCATCAGATTAAACAACACCAAAG
AAATGGTTTTCGTTGTATGTGGCGTGGTTGTGATAAAGAATTTACGACAT
TAAACGGTATCATTCTACACGTTCGGCATTCTCATATTGGGTAAGTTCGA
TATCGTTTGACGGCTAAACTTTGTCATTCCCGGGGCAAACTGGCTGCTAC
TGCTGGCGTAGTTTACATCCAGACAAGGCCCACGCCaccacaaaataaaa
atctttggTGGCGCCTCATTAGACTCTATATCTATTGCTCCCTTACGATT
TCATGGCGTGGCCCCTACCAgagacttgtttttttttccgtTGCGAAGTG
GCAATAGAAAAGTTTTCCCGAAATGAGAAAGTTTAGACGTTTTACAGTAT
TATATAAGATTGACACGCAATAGACAGCTTTAGGATTTCCAGTCTTACTC
TTTGTATATAGGGAGTCCTTAAGGtatgtctcaaaagtatgtgacCACTT
TACTTTTTTCTCAGCATGTATTAATGCTCTGTCAAAAAGCTATATACCAT
TGGAAAGAAATTTACAAGAAGAATAATCTAAAGATTAAAAGATTTtcgta
aaattgaaaattgaaaaaataaaagatattttcttccattttAAAAGTCA
TGaaatgagattttttagaatatttgatGATTTCAAATCTGTGTTCATAT
TTCTGTATCTTTCTTAGTAGAAATTTCAGTGCTGTGAAGTTAGCCGCATT
TGCTGTTTTTGGTCATGTcattatttttaaaacaaaaaaaaatttctctc
tttgctcttaggttccaaataacccccccccccccccNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCCCCCCCGTTTGTTTGGAATCTAAGAGTAATAAC
CGTAAGTAGATCCGAATCAAAAATCATCATTAACATTTCAGGGTTGAACG
GGCTGGAGAAGAAGAGTTCTATTTTGACGACATCGAAACTCAAAATGTCA
TTATGACGTCACCGCCTAAAGAAAGTGGACACCAGTCCCATCACGCCCCT
ATAATCGTATCAGCCAATCAAACCAAAGCATTCAAATTCTCAGAAGCAAT
TTCAATCCCGAGGAATCCGGAACCGATCAATATTCCGTATCGGGACCAAG
TCAGGATACCTGAGACATCCATAAGTGGCAATACTGGGGAAACTTCTAAG
CCTGTATCTGTCATCCAGCCGGTGATTGCGGCTTTGAAACCTATGGAGTT
CCAATTTAATGATGAAGTCAAATTTCCATACATGCAGAATTCTATGCAAG
GGCTTAGTCCGGAGACTAAACATAGACGCCGGAAACATGCAGTCGGTAAA
AAGAAATGTCGGAAAGTATACGGAATGAGTAATAAAGACTTGTGGTGTAC
TCAATGTCGTTGGAAGAAAGCTTGTGCAAGATTCTCATGAATTGCGCTTT
AGTAAAATGCCATGGTTCAGGTCAATGAAATATAAGCCCGAAGGCTAGAA
TTGAATCTcattggtaggatttgaagccaacaaatcctaccaaagttgcg
cggccttgagcgatctgcctggtttttacacaaatgacagattgaaacta
ataattaccgcttaatttcaaaaaaaatatctcacaaaaacaaaggaatt
gctagattcaatccgtcatcgaAAATACGGCATATATttcaaggcttcac
tttttcttgcctcagaaaggttaaagattctcctctagcccttcgggctt
taaactcaatgattaCGCTTTAGTAAAATGCCATGGTTCaggtagacgat
gctatcgtccgtttagaggtcagtaaacgcgggaaagaaTTAGGGCGCCA
GGGCGGTTTaagggaaaaaagtggcggttgagtttggaacactgtaaaca
tctccgccactgcttactccacccgaatttattaCGCCTCttctaaacta
ttcccttttttagtgatcttgtgtagatgATAGGATCGTCTATGATTCAA
GTTGCTGTTATGAGACTCAAAAGTACATGCTTGATGATACATAACAGATT
CTTGATtattaaaacttttcttttattcgaatctttctataattcgaact
tattcccagtccccgtcaaggagaaactcTCTTGATTAtattctctataa
ttcgaactctgTTCGAGTTTCACGCGGGTTGAGCGTTTCGGATTGGAAac
aagtggcttcatttccaaTGCAAGTGTTCCATGTTCGAAATGTCTTATCC
CTTCAGGGCTTTAAACTGAATGCCACAAAATTGTGTCATCTTGAAACACG
ATATTTGAACAACCAAACTGAAAATGTTGAAGGTTGAAGGTAGTCTTACA
TACTTAAGAAATCACTTAACTACCTCTTAACAATTTCTTAAGTGCTGTGG
TGCAAATAGACGATATCCGcttcacatgaaaactcagatttgacccccga
gaatttCCCACAATGCGgaaagttcacggtgaaatttttccgcacaaagc
attgtggggaattctcggggggtcaaatctgagttttcaggTTAAGCCGG
TACAGTCTATTATTCACAAACGTATTCGATTTTAATTAATTGAGTATTGT
AAATAATAGACGattgtaaataatttttaaatccGTTTTATGGATAAACA
TTTTAGTTAAATACACAAACTGTCTAAATTAGTTTCAGGAGCctactttt
ctcaggattgaatcatagaaatcttttgatttttggtacaaaggtgcaaa
atggtggtggccaaaatgtgacgg Coding sequence (CDS) from alignment at sc0000100:374779..383202+ >TCONS_00009915 ID=TCONS_00009915|Name=TCONS_00009915|organism=Clytia hemisphaerica|type=CDS|length=7005bp|location=Sequence derived from alignment at sc0000100:374779..383202+ (Clytia hemisphaerica)
ATGTATACAAAACCTCACAACGAACTAGACTGGACTCAAACTGGAAAATC
ATCATTACTAAAAGATCCAGTCTACAAAGATGAACTTTCTTTGCGCTTAG
AATCTTACAATTCAAAGATGCGAAATAGTTTAATACAACATCCAGTTATA
TCACCGACCTCAACTTTCCGCACTGACATCTCTGGACCGGTTGGACATAC
AGAAACAATACCGAGactggtcATTACGTCACCAACAAAACCCATTCCGG
TTCAAAGtccaattgatgacgtcaggaGTGCAGCCATAGCGTTAACTTCA
CTGTCTCTATCACCGGCAAGTCTTCCATCAACTTATGAAGAAGTTTCAGC
ACGTCATAAATTTGCTTTCCCACCTCAAAACACGCCCACAGAAGAACCCA
TCATCCCGTTCTACGCCACGCAAGAAAGGGGCGGAAATTCACCTCGCCCT
ACTCCACCATCAACTACGCCCCGATATCGAAATCGTGCTTACAGTCATAT
CTCAACTAATGAAAGGCTCTTAGAAATCTTACCACCCAAACCTAGAAGCT
ACTCAACAACTCGTGATTGCTTCAAAGAAATCGGTTACCCACCCTATGAG
CGGCTCACCAAACAGCGGAGTCACTCTTTCGATGCGGTTGGCCGATCACA
TAATTACTACAAAGGAGAAGAACACCCAACGTATTATTCACCTCCATCGC
AGAGGAAAATCTCCATCGATGAGGGAATAGGGACGTCCGATGGAGGGAGT
ATCGAATCACTTGAAATACCGGTCAGCTCGACTACCAAACGAAAGATTAA
ACAACACCAAAGAAATGGTTTTCGTTGTATGTGGCGTGGTTGTGATAAAG
AATTTACGACATTAAACGGTATCATTCTACACGTTCGGCATTCTCATATT
GGGGTTGAACGGGCTGGAGAAGAAGAGTTCTATTTTGACGACATCGAAAC
TCAAAATGTCATTATGACGTCACCGCCTAAAGAAAGTGGACACCAGTCCC
ATCACGCCCCTATAATCGTATCAGCCAATCAAACCAAAGCATTCAAATTC
TCAGAAGCAATTTCAATCCCGAGGAATCCGGAACCGATCAATATTCCGTA
TCGGGACCAAGTCAGGATACCTGAGACATCCATAAGTGGCAATACTGGGG
AAACTTCTAAGCCTGTATCTGTCATCCAGCCGGTGATTGCGGCTTTGAAA
CCTATGGAGTTCCAATTTAATGATGAAGTCAAATTTCCATACATGCAGAA
TTCTATGCAAGGGCTTAGTCCGGAGACTAAACATAGACGCCGGAAACATG
CAGTCGGTAAAAAGAAATGTCGGAAAGTATACGGAATGAGTAATAAAGAC
TTGTGGTGTACTCAATGTCGTTGGAAGAAAGCTTGTGCAAGATTCTCATG
AATGTATACAAAACCTCACAACGAACTAGACTGGACTCAAACTGGAAAAT
CATCATTACTAAAAGATCCAGTCTACAAAGATGAACTTTCTTTGCGCTTA
GAATCTTACAATTCAAAGATGCGAAATAGTTTAATACAACATCCAGTTAT
ATCACCGACCTCAACTTTCCGCACTGACATCTCTGGACCGGTTGGACATA
CAGAAACAATACCGAGactggtcATTACGTCACCAACAAAACCCATTCCG
GTTCAAAGtccaattgatgacgtcaggaGTGCAGCCATAGCGTTAACTTC
ACTGTCTCTATCACCGGCAAGTCTTCCATCAACTTATGAAGAAGTTTCAG
CACGTCATAAATTTGCTTTCCCACCTCAAAACACGCCCACAGAAGAACCC
ATCATCCCGTTCTACGCCACGCAAGAAAGGGGCGGAAATTCACCTCGCCC
TACTCCACCATCAACTACGCCCCGATATCGAAATCGTGCTTACAGTCATA
TCTCAACTAATGAAAGGCTCTTAGAAATCTTACCACCCAAACCTAGAAGC
TACTCAACAACTCGTGATTGCTTCAAAGAAATCGGTTACCCACCCTATGA
GCGGCTCACCAAACAGCGGAGTCACTCTTTCGATGCGGTTGGCCGATCAC
ATAATTACTACAAAGGAGAAGAACACCCAACGTATTATTCACCTCCATCG
CAGAGGAAAATCTCCATCGATGAGGGAATAGGGACGTCCGATGGAGGGAG
TATCGAATCACTTGAAATACCGGTCAGCTCGACTACCAAACGAAAGATTA
AACAACACCAAAGAAATGGTTTTCGTTGTATGTGGCGTGGTTGTGATAAA
GAATTTACGACATTAAACGGTATCATTCTACACGTTCGGCATTCTCATAT
TGGGGTTGAACGGGCTGGAGAAGAAGAGTTCTATTTTGACGACATCGAAA
CTCAAAATGTCATTATGACGTCACCGCCTAAAGAAAGTGGACACCAGTCC
CATCACGCCCCTATAATCGTATCAGCCAATCAAACCAAAGCATTCAAATT
CTCAGAAGCAATTTCAATCCCGAGGAATCCGGAACCGATCAATATTCCGT
ATCGGGACCAAGTCAGGATACCTGAGACATCCATAAGTGGCAATACTGGG
GAAACTTCTAAGCCTGTATCTGTCATCCAGCCGGTGATTGCGGCTTTGAA
ACCTATGGAGTTCCAATTTAATGATGAAGTCAAATTTCCATACATGCAGA
ATTCTATGCAAGGGCTTAGTCCGGAGACTAAACATAGACGCCGGAAACAT
GCAGTCGGTAAAAAGAAATGTCGGAAAGTATACGGAATGAGTAATAAAGA
CTTGTGGTGTACTCAATGTCGTTGGAAGAAAGCTTGTGCAAGATTCTCAT
GAATGTATACAAAACCTCACAACGAACTAGACTGGACTCAAACTGGAAAA
TCATCATTACTAAAAGATCCAGTCTACAAAGATGAACTTTCTTTGCGCTT
AGAATCTTACAATTCAAAGATGCGAAATAGTTTAATACAACATCCAGTTA
TATCACCGACCTCAACTTTCCGCACTGACATCTCTGGACCGGTTGGACAT
ACAGAAACAATACCGAGactggtcATTACGTCACCAACAAAACCCATTCC
GGTTCAAAGtccaattgatgacgtcaggaGTGCAGCCATAGCGTTAACTT
CACTGTCTCTATCACCGGCAAGTCTTCCATCAACTTATGAAGAAGTTTCA
GCACGTCATAAATTTGCTTTCCCACCTCAAAACACGCCCACAGAAGAACC
CATCATCCCGTTCTACGCCACGCAAGAAAGGGGCGGAAATTCACCTCGCC
CTACTCCACCATCAACTACGCCCCGATATCGAAATCGTGCTTACAGTCAT
ATCTCAACTAATGAAAGGCTCTTAGAAATCTTACCACCCAAACCTAGAAG
CTACTCAACAACTCGTGATTGCTTCAAAGAAATCGGTTACCCACCCTATG
AGCGGCTCACCAAACAGCGGAGTCACTCTTTCGATGCGGTTGGCCGATCA
CATAATTACTACAAAGGAGAAGAACACCCAACGTATTATTCACCTCCATC
GCAGAGGAAAATCTCCATCGATGAGGGAATAGGGACGTCCGATGGAGGGA
GTATCGAATCACTTGAAATACCGGTCAGCTCGACTACCAAACGAAAGATT
AAACAACACCAAAGAAATGGTTTTCGTTGTATGTGGCGTGGTTGTGATAA
AGAATTTACGACATTAAACGGTATCATTCTACACGTTCGGCATTCTCATA
TTGGGGTTGAACGGGCTGGAGAAGAAGAGTTCTATTTTGACGACATCGAA
ACTCAAAATGTCATTATGACGTCACCGCCTAAAGAAAGTGGACACCAGTC
CCATCACGCCCCTATAATCGTATCAGCCAATCAAACCAAAGCATTCAAAT
TCTCAGAAGCAATTTCAATCCCGAGGAATCCGGAACCGATCAATATTCCG
TATCGGGACCAAGTCAGGATACCTGAGACATCCATAAGTGGCAATACTGG
GGAAACTTCTAAGCCTGTATCTGTCATCCAGCCGGTGATTGCGGCTTTGA
AACCTATGGAGTTCCAATTTAATGATGAAGTCAAATTTCCATACATGCAG
AATTCTATGCAAGGGCTTAGTCCGGAGACTAAACATAGACGCCGGAAACA
TGCAGTCGGTAAAAAGAAATGTCGGAAAGTATACGGAATGAGTAATAAAG
ACTTGTGGTGTACTCAATGTCGTTGGAAGAAAGCTTGTGCAAGATTCTCA
TGAATGTATACAAAACCTCACAACGAACTAGACTGGACTCAAACTGGAAA
ATCATCATTACTAAAAGATCCAGTCTACAAAGATGAACTTTCTTTGCGCT
TAGAATCTTACAATTCAAAGATGCGAAATAGTTTAATACAACATCCAGTT
ATATCACCGACCTCAACTTTCCGCACTGACATCTCTGGACCGGTTGGACA
TACAGAAACAATACCGAGactggtcATTACGTCACCAACAAAACCCATTC
CGGTTCAAAGtccaattgatgacgtcaggaGTGCAGCCATAGCGTTAACT
TCACTGTCTCTATCACCGGCAAGTCTTCCATCAACTTATGAAGAAGTTTC
AGCACGTCATAAATTTGCTTTCCCACCTCAAAACACGCCCACAGAAGAAC
CCATCATCCCGTTCTACGCCACGCAAGAAAGGGGCGGAAATTCACCTCGC
CCTACTCCACCATCAACTACGCCCCGATATCGAAATCGTGCTTACAGTCA
TATCTCAACTAATGAAAGGCTCTTAGAAATCTTACCACCCAAACCTAGAA
GCTACTCAACAACTCGTGATTGCTTCAAAGAAATCGGTTACCCACCCTAT
GAGCGGCTCACCAAACAGCGGAGTCACTCTTTCGATGCGGTTGGCCGATC
ACATAATTACTACAAAGGAGAAGAACACCCAACGTATTATTCACCTCCAT
CGCAGAGGAAAATCTCCATCGATGAGGGAATAGGGACGTCCGATGGAGGG
AGTATCGAATCACTTGAAATACCGGTCAGCTCGACTACCAAACGAAAGAT
TAAACAACACCAAAGAAATGGTTTTCGTTGTATGTGGCGTGGTTGTGATA
AAGAATTTACGACATTAAACGGTATCATTCTACACGTTCGGCATTCTCAT
ATTGGGGTTGAACGGGCTGGAGAAGAAGAGTTCTATTTTGACGACATCGA
AACTCAAAATGTCATTATGACGTCACCGCCTAAAGAAAGTGGACACCAGT
CCCATCACGCCCCTATAATCGTATCAGCCAATCAAACCAAAGCATTCAAA
TTCTCAGAAGCAATTTCAATCCCGAGGAATCCGGAACCGATCAATATTCC
GTATCGGGACCAAGTCAGGATACCTGAGACATCCATAAGTGGCAATACTG
GGGAAACTTCTAAGCCTGTATCTGTCATCCAGCCGGTGATTGCGGCTTTG
AAACCTATGGAGTTCCAATTTAATGATGAAGTCAAATTTCCATACATGCA
GAATTCTATGCAAGGGCTTAGTCCGGAGACTAAACATAGACGCCGGAAAC
ATGCAGTCGGTAAAAAGAAATGTCGGAAAGTATACGGAATGAGTAATAAA
GACTTGTGGTGTACTCAATGTCGTTGGAAGAAAGCTTGTGCAAGATTCTC
ATGAATGTATACAAAACCTCACAACGAACTAGACTGGACTCAAACTGGAA
AATCATCATTACTAAAAGATCCAGTCTACAAAGATGAACTTTCTTTGCGC
TTAGAATCTTACAATTCAAAGATGCGAAATAGTTTAATACAACATCCAGT
TATATCACCGACCTCAACTTTCCGCACTGACATCTCTGGACCGGTTGGAC
ATACAGAAACAATACCGAGactggtcATTACGTCACCAACAAAACCCATT
CCGGTTCAAAGtccaattgatgacgtcaggaGTGCAGCCATAGCGTTAAC
TTCACTGTCTCTATCACCGGCAAGTCTTCCATCAACTTATGAAGAAGTTT
CAGCACGTCATAAATTTGCTTTCCCACCTCAAAACACGCCCACAGAAGAA
CCCATCATCCCGTTCTACGCCACGCAAGAAAGGGGCGGAAATTCACCTCG
CCCTACTCCACCATCAACTACGCCCCGATATCGAAATCGTGCTTACAGTC
ATATCTCAACTAATGAAAGGCTCTTAGAAATCTTACCACCCAAACCTAGA
AGCTACTCAACAACTCGTGATTGCTTCAAAGAAATCGGTTACCCACCCTA
TGAGCGGCTCACCAAACAGCGGAGTCACTCTTTCGATGCGGTTGGCCGAT
CACATAATTACTACAAAGGAGAAGAACACCCAACGTATTATTCACCTCCA
TCGCAGAGGAAAATCTCCATCGATGAGGGAATAGGGACGTCCGATGGAGG
GAGTATCGAATCACTTGAAATACCGGTCAGCTCGACTACCAAACGAAAGA
TTAAACAACACCAAAGAAATGGTTTTCGTTGTATGTGGCGTGGTTGTGAT
AAAGAATTTACGACATTAAACGGTATCATTCTACACGTTCGGCATTCTCA
TATTGGGGTTGAACGGGCTGGAGAAGAAGAGTTCTATTTTGACGACATCG
AAACTCAAAATGTCATTATGACGTCACCGCCTAAAGAAAGTGGACACCAG
TCCCATCACGCCCCTATAATCGTATCAGCCAATCAAACCAAAGCATTCAA
ATTCTCAGAAGCAATTTCAATCCCGAGGAATCCGGAACCGATCAATATTC
CGTATCGGGACCAAGTCAGGATACCTGAGACATCCATAAGTGGCAATACT
GGGGAAACTTCTAAGCCTGTATCTGTCATCCAGCCGGTGATTGCGGCTTT
GAAACCTATGGAGTTCCAATTTAATGATGAAGTCAAATTTCCATACATGC
AGAATTCTATGCAAGGGCTTAGTCCGGAGACTAAACATAGACGCCGGAAA
CATGCAGTCGGTAAAAAGAAATGTCGGAAAGTATACGGAATGAGTAATAA
AGACTTGTGGTGTACTCAATGTCGTTGGAAGAAAGCTTGTGCAAGATTCT
CATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009915-exon-sc0000100-1491911889:374779..375090 | TCONS_00009915-exon-sc0000100-1491911889:374779..375090 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1510915933:374779..375090 | TCONS_00009915-exon-sc0000100-1510915933:374779..375090 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1575043694:374779..375090 | TCONS_00009915-exon-sc0000100-1575043694:374779..375090 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1491911889:375485..375950 | TCONS_00009915-exon-sc0000100-1491911889:375485..375950 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1510915933:375485..375950 | TCONS_00009915-exon-sc0000100-1510915933:375485..375950 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1575043694:375485..375950 | TCONS_00009915-exon-sc0000100-1575043694:375485..375950 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1491911889:376390..376517 | TCONS_00009915-exon-sc0000100-1491911889:376390..376517 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1510915933:376390..376517 | TCONS_00009915-exon-sc0000100-1510915933:376390..376517 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1575043694:376390..376517 | TCONS_00009915-exon-sc0000100-1575043694:376390..376517 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1491911889:377471..377922 | TCONS_00009915-exon-sc0000100-1491911889:377471..377922 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1510915933:377471..377922 | TCONS_00009915-exon-sc0000100-1510915933:377471..377922 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1575043694:377471..377922 | TCONS_00009915-exon-sc0000100-1575043694:377471..377922 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1491911889:379912..380018 | TCONS_00009915-exon-sc0000100-1491911889:379912..380018 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1510915933:379912..380018 | TCONS_00009915-exon-sc0000100-1510915933:379912..380018 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1575043694:379912..380018 | TCONS_00009915-exon-sc0000100-1575043694:379912..380018 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1491911889:381370..383202 | TCONS_00009915-exon-sc0000100-1491911889:381370..383202 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1510915933:381370..383202 | TCONS_00009915-exon-sc0000100-1510915933:381370..383202 | Clytia hemisphaerica | exon |
| TCONS_00009915-exon-sc0000100-1575043694:381370..383202 | TCONS_00009915-exon-sc0000100-1575043694:381370..383202 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100 | supercontig | sc0000100:374779..383202 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013087 | Znf_C2H2_type |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
The following BLAST results are available for this feature:
|
