TCONS_00009900 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009900
Unique NameTCONS_00009900
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length829

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009900 ID=TCONS_00009900|Name=TCONS_00009900|organism=Clytia hemisphaerica|type=transcript|length=829bp
TTTGGATTCTGATTTTGAACCATGCCCTGGGAATGAAATGTGGAAAAAat
attTTCAGCTCTTTTATGCTTACCTGATTGTAGTCTTTTTCTATACCATC
ACCGTGGTTCACGCGATATCAAGTAGAAAAGAAAGAAGGGCACTGAAGTT
AGtaCCTGTACCAGAAGCGCCATTAGAAGAAAATGGAAAGAAGAGATTAA
CAATGTGGGGGGAGAAATGGTGTGGAACAGAGGCTCATGGGAAAAGTTAT
GATCACGAAGAATCATATCAACATCTTACACAAGGTCTTTCTAAATGTTG
TGACAAACATGATGAATGTCCACTTGGAATGTCGCCGCATTCTCAAAAAT
GGAACGTCATCAACACATCTGACTACAGTTTGGCTGAATGCCAGTGTGAT
GACCTTTTCagagaatgtttgaaaaatGATGGGAGTTGGTCTGCAGAAAC
TGTCGGAACTCTATTCTACAACGTTCTCTCAGTCCCTTGTATCACCGTAG
AAGAAGGTGCAAACTTAGATGAACCAGGGACCGGCATTGATGGAACAGAT
CAGCTAGATTACGTCTCTGATATCGGGAACGGCCCTCCCGCCCATTCACA
GGCAGGTGGCTACGGACCACCCGCCCATGGACCGCCTGCCTACTCTCATG
CGGGTGGCTATGGACCACCTGCCCATTCACAAGCGGGCGGCAAAGGTCCA
AAACGTGGACTGCCTTCTGTACCTAAGCCTCTTAAAGATTGGATAAAGAG
CAAAAATAAAGACAGGCCAGGAGCAGTTATAGTCAAACctaaagaatttt
aaaattgaaagttcaacaTTGACCTACTA
Run BLAST on NCBI

transcript from alignment at sc0000100:117496..132827+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009900 ID=TCONS_00009900|Name=TCONS_00009900|organism=Clytia hemisphaerica|type=transcript|length=15332bp|location=Sequence derived from alignment at sc0000100:117496..132827+ (Clytia hemisphaerica)
TTTGGATTCTGATTTTGAACCATGCCCTGGGAATGAAATGTGGAAAAAGT ATGGAAATGattctttttatcaaaatttctatTCTTAGTTAATTATTTTT GCATTCAGTCAAATGTCTTATTAAGTTTTCTCAATTCATTAAAGTAGCAT TGATTCAAAGCATCAATTTgtacaaaaatgaattttatgttGCAAAATCA GCCCTTTTACAAGAAAATTGGTACCGAGAAGACCAAATTAAGGTGCTCTC TGGTTGTCAAAATCCCCAGAAAAATTAGTAAATGTGTACTTTGCGGTGGT ATGCAAAAACATCTCGAAAACCCTTTTATATATCAATCTCTTCGATTTTA GTACCGATCCCCTGTTAAATTTAGGCTGAATTTGGGATCCTAATCTATGT ataaatattttaagatgattctctcaaaaaaactaaaaaatccaCCGATG AAAtgtaaaaagcgtgtatcttaCCGCCATGTAGACAGCAAAGAGGATAC CTAACTGGCACACAAACGTTGTtgcaacgttcatctaacgttcacaacgt ccacataacgttagatgaacgttgaaacaacgttgtgtgccagctgggta aaaACAGTCAAATGTCTCTCTTGTGTAATGATCTTTAAACtcgttttttt atttagatattTTCAGCTCTTTTATGCTTACCTGATTGTAGTCTTTTTCT ATACCATCACCGTGGTTCACGCGATATCAAGTAGAAAAGAAAGAAGGGCA CTGAAGTTAGGTAAGGATTGAGACTCTCAAGCGATGGTAAGGTATGGTAT TTTGATTTCACAGATTAACTTTCCAccgttggaaaaaaatcattatatcA GGCTCTCTAgaattatttaaaggttttatttttacataagtgttcctgtt tcatatcaggacagtgtcttcctattgttattaTGCtgttataagcaaaa aatgtttttcttttcctatttctgaccaatcttgctccacatccgtgtca atcactatcatttaaaaacaaaaccttgctgatttcaaatatatattcat ATCTTGAccatttttcttagaaaaaaatttacagCCTTTTGAGGTTGCtc tattttggcaaattttggtCGTTATAGGCCTTCCTTGGACTGTAACTTTA TATTCATAACGAATAcgaaaaatttaatcaaaaatttaaaatcagaaagg tttattttctaaaaagtttGATGTCGTGATTTTTTAAACCAATAGAAAAC CAAATAGATTCTTCTTcttactaatatctttccaacgatgtgTATAGACT GATgtatgattttcattttttttagtaCCTGTGCCAGAAGCGCCATTAGA AGAAAATGGAAAGAAGAGATTAACCATGTGGGGTAAGAtaattacagttg actctctctaattcgattttcaagatgAATCGGGTTtccatcgaattaga gaaatattcgaataacaGATGGCAATTTAAACGACTTCCTAGATGAGGGG gccaatattttagttcaaaTTACATAAAGATTCGGAATTTAGGAGAGTTG ACAattacaccttttcgaccgtagtcgtgcgatcaggcgcgtgccacttt tatCCCGCTAAActcaatccaatcctttttaGACACATTTTTATAATGTC TATTGGtgcaaaaaaaggactgggacggttttactgggataaagtggaca aaaaatGGTGTATTACTATTTATCAGGTACGTCAGAAATAAGTTATCCCC TTTGATCTAAAATTTCTgtatcaattttttaaaataaatcaaatcttCGT CAGAAGACAGAATTCTTTTGATTTCATATTCAACTTTTAATTTAATTCAA CAAATTATCTAATAGAATTTATCTATTAAATTAATCTTTCCTTTTTCAAA CGAAAGAAGGTTgattcttaaaaaataatagaactttttttttaaagagg gtAGCCTATTTTTGGTAGACTGGGTAAGTTCCAGGATGTTCCTGTTATCA CGGAGGAAATTTGATAGTACCCTATTTGACAAGACTAATCCATGGCAAAA TCCAGGGGGCACTTCGgtaaaattgggtacggggacgtaCCGTTGGTTAG TGTCTCTTTTtcaggctctgaagatatctgacagggtccaaaaTTTACCA ACTCTTAAGGTGTGTATCTGATAGGATCAACTTTTGGTAATTGTTGACAA TTTCCAGGTTGGAAAATTCTTCGTTTTAGTTATTTTGGCCACTTTTAAGG GTGAATATGTGAAAAAtgtgaaagatttttttcggacaaattTACCTAAT AttgatatctgacagggtccattttAAAACTCCAGCGGCATGTCTCTGTC CGTCCTCATAGGCCAGTGCCTCTCCCCCCCCCGGTGGCAAATCTAATTTT TAggaacaagttttttttttaaagtaaatgaCTGATGACTGATTTGTCAA GTATTTAGACCCCTGCAAATTAAATCTCTCCCATTTAGGATAGCCGAttg tattgattgattgattgattgattgattgattgattgattgattgattga ttgattgattgattgattgattgattgattgattgattgattgattgtag GTGAGAAATGGTGCGGAAGTACaattaaagagaaagtattGCAAGAAGAT TCAAGTACACCAGAGACTCTGACTTCCGGTTTGGAGACCTGTTGTAATTT ACATGACGATTGCCCACtcggtatgacttttttcattgttttgtattttt attttaactatGTGGCATAAATCCTGAACCTTAATTTTGCCGAATTTCAG TTAAAGTCAGAACTTGCTGCATCGCCAAAATAGGTTTTTTCCacaataca ccttatcggagtttttgatttttctaaaaaagcattgcattgtgggattg tttcgggggtatcaaaatagaattccctcgaggaattcctaagattTCTA TTGtgatactcccgaaacaatctcataatgcatcgcttttttagaaaaat caaaaactctgataagatCTATTCTTATCTTTTATAGAAATAGCccctgt ttttctttaaaacgcTCATTTTCAGGCAAACAATAACGACTATATATCTA CGTCTTGCCAAAGTTCTCTCTGGCCAAAATCCCTATAAagtgccatggtg attaacttttagcggattttattaaaactactttctatttataaaaaaaa tcatttaatgtctcaagggacataatcaccatggtaattgttcgTGGCGT AATttaagaaaaggtctatttattcACATAGTAATAAGGGTAGACATTCC GGGGCAGTGGATTACCAAATGACGGTATGTgtggcgaaaaaattggctct GTCTGACCCACCCATTTTAAGCCTTAAAACgcagttttttttgctcattt gATAAcgattttgaccaaaaatatcctacatccgccaaattaaattcccg ccaaaatttcttcctttaaggtagacaTTTGCCTGTCCAAAATTTTAGTC GTTCTTAAACGAGTTTCATTTACTGTTATTTCAAGGTATGCCACCAGACT CACAGAAGTGGGACACAGTAAACAACTCAGAGTACAGTCTAGCTGATTGC CAATGTGATAATCTCTTCTACAACTGCTTGAAAACGGTTTGTATGATATT ATATAATCGCTTTTGTATAAATTAGGGTGGCTCTAAATCTGAAAACTACC GTATTAGCTTTCAAAATCGTATAGTGCACCTGTAtggtgcagagaaaatt tacccaaatttgagtaaattgttCGTTTGGAAAGGtcttttaaaattaaa taaCCATCATGAACGAGATTTAGCTAAATAGTGAATAGTACAGAAACAGT CAAAACTACTTCTCCGTAAGGTCCTACTTTGATTTCATACACCCTGATTT ACTTAAAAGATATCTAAAAGTCATAGATATCTGAAAGTCATAAATATCTG AAAGTCTGTAACTGCTATTCTATCTTCCTTGTCATGCGAACGTAACTTAA TAACAGCTGTAGAAAGTCTGAATGCGACAAGCTGATGTTCTAAAGATCGC TGAAAACTGTATATTTTCGCAAACGCTTCACCGTACTAACACAGTATCTG CTATCAAGTTACGTCAACGgatctatttctattttatcGCACTCAGGACG GTGGATGGTCGGCAGAAACAGTGGgccgtttttttttcaatgttctTTCT ATACCATGCGTCGAAATTGAAGACGGCGTCAATTTGGATGAGCCAAGCAC AGGAAAATCAGAGACTGGTCAACTAGACTATGCAGCTGAATCGGCTAAAC ATAATAACGGAAATGGAAATGGAAATGGGAACGGAAATGGAAATGGGAAC GGTAATGGAAATGGGAACGGTAATGGAAATGGGAACGGAAATGGAAATGG CAACGGAAATGGTGGCTATGGAAATGGACCAAGACGAGGTTATGGAAATA ATAATAAACCACCTCATAAGCCACATGCGAAAATTGTTAAAGCGAGATTG TTTTGATTAACCAAATCGATTGCTTGGTTTAAACTTGGTTTCTAACTATC CATGATATGCATCATTACAATGTATTTCACGAACCCAACAGCtcattggt tgcaagtgacgtattaaatgattttacgtcacttaaacaaccaatcagct gttggttacatcagaagacattgcaatggcgcATATCATGAAGTGCTATC TTCCAAAGGCGCACTGCTCGTAGATATTGTGATAGAGTTAAATGTCggat attttttggaaagtcAACCAAGAATTGTGAATACCATCTTTTTGTACGTC TATAAGACGTCCATAAGACTTTAGATCAAGGTCCAGATGGCATCGTGTGT GAGCTCTACTTATTTACCAgaaatttatcgaaaaatgaTTTACGTATATT AAAAATCCTGGTGAGaggtagcctggagatccatgttatgatttttatat ACTGACGGCGAAATGATTACTACATGGTTTGGGCAATGTGTTTGAATTCC TCATTCTTCAAATGATAGTTGAAAAACACAGCCaataaaattttgttatt ctttccctagtcacactttcttagagaaaacgcaagttcccaaacttgtt ttaattttagtaagtgaggacagcgctataaattcgaaatttcctactgt aaattttttgagacaGAATCCGTCTTGTGTATTAGCCCATGAGCTAGACA CTTTTTGGGGCTCACTCGACGGAGGAAGCCTCACTATGATTTTCGGAAGC CTTAACTactatattttaagaaaaatcagggtgcttttttcaaacttaca gCTTTTGACcgaattttcaacttttttagggGGTGGTAAACGctaaattt tcatatttgcTTGGATTTCCTTAGGAAATGAAATTATCATGTCATCTTTA AAATAGTACATCTCGGTCAATAATGTTCAAAAATGCAccaaattttcaag aattaCTCCTAAtatactaattttttttaaactgaaaaaaaattgaaaaa taattttctagggGGTTTGTACCGGAGAAAACTACCGAAAAACCGGAATT TTAGccattgtttgcattttttggaattatttCCTTAGTTGATTATCACA TTTCATCTCTAAACAGTGTTATTTGGGTTTCTTTACATAAATATAttaga aatatgagaaaaatgGTAGGTTTGGGTCCGACTGGGGGGTGTCCGGACCA AAAAACGGCGAAAAACTCCGGAAAATTGCcatttttgacccattttagCC TTACTTTCATATTTGGTCCCTGAAATATGAATATTATGAGTTGTGTGAAA TCGTTTATCCATAAAGTTCTGTAAAGAAAATGTAAAGCAATGATTTTGGA CCATTTCAGGTGGTTTCCGGaccaaaaaaggcgaaaaaccccggaaaatg gccatttttgacccattttagtcttattttcaaatttaatcccTGTGAAG TACGAAATTTATGAGTTGTGTGAAATCGTTAATCTATAAAACTCAATAGT GAATGGGTTAAGAGATGATTTAGGACTATTTCAGGTGGTTTCCGGACCCA AACAATGCGAAGGTAGGGGCATGACCGTACATGTCGCAAACAAACTTTTG GATGTTTTCGTGCGTATTTCGTTTCTCCCAAGCGTGAAAATAGTTCCACA TACTCTTTCTTCTTCGCCATTAATTTGAATGGTTTGGTCTTTCCTTTACC AGAAAAGGCGCTACCTGTATCGCAGCCAGTGAAAGCGTGAATTCCTAGAG GAGCTTGACTTGGCAGATCTAGGTCTTGATCAGGGAAACGTTTCTTCAGG GAGGATCTTATTCTCTGAATGGAGATTGTTCGGGCTTTTTCCTTTGTCTC TGTTCGGATGAACATTTTCGGCTGAATTTCTGTCGATGCTGCGATGGTAA TCAAGAAAACATCTGTATCCGGGGTATGTATGATGATGTTCCCGAATCCA GCTTGACTCATGTGGTTAGCATGAAGAAGCATGCGGGTGTCGGCCTCTTC ATGGTTGCATGATAGCTCTGGCACATTTTCATCTGTGAGATTGGACATCA GCTTTACACATATGCCTTCGTATGCAACGTAAACGATTCGATCGCCTACA TCATATTGGTCCCATTACTTGACAAGGTACTCGATCAAagcttttttgtt gttgctaCTCGACAGGAAGGCACCCCATTGTTTGATCAACTGACTTccaa tgatttttttgaattgcagTTTACCAACAGCACGGTGAACTCTTTCAGCA TTCTTGATAGATGAGTCCAAATATACATCGAAAACTATATCATTCTTTAG GATGCAGGGTTGTGTTCGATGATGGACTACATCATTTCATCTGCAAACTG TTGGTACGTCTTGCCCTTGGTTTTTTGCTTCCTAACAAGTGCTTTTCCGT CAATGATTGTGGAATATGGCTTCGGGTGCACTTGTTGAGGTGTTGTTTCT TTTTCGATTCGTGCATGAATGTGGCTTTGTTGGTTTTGACCAGCTCACCA GTACTGCTCGATAAAGACTAAGATACTGGTCCCAACGGATAGTGGAAAAC TTCTTTCAGGTCGGGTGATTGTGTCTGCTGAAATTATACTGCACCAAAGA TAGTGCTTTGCTCGCTGACCTCCTTTGGTTTTGACTGCCGCTGCTTTCAG TTTGGTAATGAATGTGCCCTTGGGCTTGTGAAGATTTTAGGACCTTCTAG AATTGCTTTTCTGGGACTAAATCATCCCTATTCTCTAAAAATACATTATG AAGATTATTTAGCTGCACTTAtacctaaagtctgtccagatataattggc agtggaaacaagtaATAagttagtaataagttggagatttgatatttcac agaaaagtgctaccaaggggtatttcgggtcccatatcttccgaaggact tttctatttgcctcgaaatttaagaaacttcttaacctaaggttgaacta ccactggtgtaaagaTGAACGTTATaacataagtagaaaaaaagctcaat ttttgcaatcgcaaatttaaccactaaaaatcgcgaatttttcaaccaaa aatacattcaaatatagcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNttctctaaaacaagcaaaaaagatttccataatt atatttgactatcaaaagttacaggcattcttgtttccactgccaattat atctggacagactttaatattGAGCTAAAACATTATCTAagctaaaaaaa tcaaaaatggctATTTTGTTTTTTGGGTCCGGAAACCACCTGAAATAGTC CTAAATCATCTCTTAACCCATTCACTATTGAGTGTTATAGATTAACGATT TCACACAACTCATAATATTCGTACTTCACAgggattaaatttgaaaataa gactaaaatgggtcaaaaatgGNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttcgccttttttggtCCGG AAACCACCTGAAATGGTCCAAAATCATTGCTTTACCTTTTCTTTACAGAA CTTTATGGATAAACGATTTCACACAACTCACAATTTTCATATTTCAGGGA CCAAATATGAAAGTAAGGctaaaatgggtcaaaaatggccattttccggA GTTTTTCGCCGTTTTTTGGTCCGGACACCCCCCAGTCGGACCCAACCTAC catttttctcatatttctaaTATATTTATGTAAAGAAACCCAAATAACAT TGTTTAGAGATGAAATGTGATAATTAACTAAggaaataagtccaaaaaat gcaaacaatagCTAAAATTCCGGTTTTTCGGTAGTTTTCTCCGGTACAAA CCccctagaaaattatttttcaataggAAATCCAagtaaatatgaaaatt tagcGTTTACCACCccctaaaaaagttgaaaatatcggTCAAAAGctgta agtttgaaaaaagcactctgatttttcttaaaatatagtAGTCAAGGCTT CCGAAAATCATAGTGAGGCTTCCTCCGTCGAGTGAGCCCGATTTGCCAAA ATCTGGCCTCTAGCTCATGGGcatatcagattataaaaatatagaacggg tctcctgtctagtcGACAGGAAAAAACACACAACTAAAAAGTAAAGTAAT TTTGGGTTTATTGGCCATAACCATAGAATATCGGCGGCGGTATAGTTTTT GCGGCGAAAATCTGTGTGCAAAGATTTCATTAAAGTTAGAcgctattttt tataaaaatattcatgatgagattggccaaaaattaagaacatcctaaga atATGACACCAtcatgatgaaatttggcaacagaagctaagaatgccatt tttagagcatttccATACTTtcacaaaagtgccattttatgctttcatat gtattaaatgttaaatctagtctaaattaggatcctaacctaagaatact gtaagaatattttaggaagattctctcaaaaaagttaagaatgaaatcca tcatgaaatgaaaatacacgatttgtttaaaaaaagtgtttaaattATAA GCTGCTTTAGATTTCTTTTTCGTTCATTTTGCACGGTTGACTGAACAAAT ATAATTGCAAGATTGTtcaagttttataaaaatatgtttgttttttcata tTGTGAATTATTAGAAAATGTAACAAATTTCATTAAACATTCAGtatttt ttgacagattttaagTGTAAATTTGAGACTTGATTTTTCTGAGGTGCACA GAGATAGGATGTGGCTGAGGTAACAATATCAATTTATACATATTTCTTTT ATgagtaaaaattaaattttgtgattttgcgaATTTCtaccattttcatg aaattgattACTGACTCCAGAAATTAAATCCATggcgaaattttcgaaat cGCATATGCGGCGGAGGAGCTAGTAAAAATCCTCTTTTGGTGGAGAAGAA TAGCAATTTTCACCtgactttttggctttttcgcgaaattaaactCACAC GAAACTTTCAAAACTCCGACTCgctaaattaaatccagaaaatttcgcaa aTCTTTTAccttgcgaaatttaatctcgcgaaattcaatccgattaaagt aaaaCCCCAATTTTCGGCTCAGGGCTCGAGTAGGATATTCCGGATTTCAG CCAGAAACTTGTTTATGACTTTTGAGCCGAAAATGCGTAGCAACTTATTC AAAAATGTTTGCTTTTCATCTTATTTTATGTCCAAAATACCCCAAATTTG GTATTCAAGTACCATCAGTACACATCTTAATGCTAAAAATGCCTCTTTCT TCTCTAGgtattttttgttgcttttccTGATTACGCTCAGTTTCAGAGCT AGGCTGCTAAGGCCAAGTTACTTAATTTTGTGGCCATTTTCAGTACTGGA Cccttagcaactcggttgcttataaaaaagaagtctttatgttgggaaat tcaccggggagTTTTGAAACCACCATTGATTTGTAAGTGTTCCAAACTAG GTTCGAAGGGtcgagttttaacactagacttaggACTCAGGGCCTTAGGG TCTGAGGAtccaaatgttcaaaaataatccaataaggctcagaatatagc ctggaagtctgccaaccccttccaaattgaaatattcgattaaattaaag aaatagcccaaaatcgactttctcgccggaactttaaatcttgaaaaacg ttaaaataaccagaaTTCTctatatatttcaaccatgattgtagaccTAT CTTCCCCACATACTTTATCAGAGTGGTGGAGTCGATTGTTTTAGACACAT GTTTAGCGAACAAGCGCGATGCGGAAGTACATTTTTCTCGATGTCCGTGA ATTATGAGCGGGTTATGATTTTATGACTTCAGTTTTTCCACATTTTTTGA GAATTCGAAAAtgattttgtaaaagaaatttaatactCGCTTTTTATCAA AGTGTTAGTCTTATCGATCCTCTTAGTCACAATTTCATGCCTATTTCAAA AACATAACTATTTCATGAAATGTTTTATGATAATCATGACGCAATGTTTA AAAGAAACACCTCAAATAGCCCAGGCGTTTGTCAATGGTTTTATGGATTT TCTGGGTGCTCATgtatcccagctgacacacaacgttttttcaacgttca tctaacgttataatatggacgttgtgaatatcagaaaaacgttaaaacga cgTTGTGTTCCAGCTGGGATAAAACATTCCGTCATTAATTTAAATTAATA TCATATGAACATAATGTAAAAATCGagaaattagtttttttacaaaatca ttTTCTTGTCACCAGGCCACTGAAGCTGCTTTTTGCTTACCTGATCACAA CATTTTCCTACACCATCACGAGTGCTCACGCGAAACCCAATACCAAAGAA AAACAATCGAATGAATTAGGTAAgaattttatagtttttttttcaaccta aGTGTAGTTATTGTATACTCGTCTCAATTTCATACTCTTTCTTTACATCa atagttgacgctctcttatttACCAATCTGGAAAGGAGGTAAATGTTACG CCGGAGCTGCGCCAACTTAACTGGGAAAAGTTGAAGGCAGTAGATCTCAA ACCTCAAATCTATGCCGGAAATATCCGGCGCACAAGCCGCAATTtcctac tctgtaccagagtgtatctcacatCGCTTCGTatcggcaatgaattttga aattagccgtagatatcgggtctgtgtacagacaacaaTTTCCAGACTGG CTTATTTAACGTTCtgctattcgatacgctccatttttttattataatat tgAATGAAAGTCACCGTCATCAAGAAACTCATAAACAGTAGAGTACTGAA TGTTACTGGATCAGTGAAAGATCGTGCTtagatttttcattatttttttc ttagtaCCTGTACCAGAAGCGCCATTAGAAGAAAATGGAAAGAAGAGATT AACAATGTGGGGTAAgataaatatcttttaaaattgaCTCTCTAATTCTA ATTCCATCTTCAAGaggaatcggattttcatcgaataagggagtgcATCT GTCATCTAGTCATCAAGACCAGATTTAAAACAACTTcagatttgcagatt tgaaGATCTTCTAaccatacagggtgtccctaattaaagtatcgagtcga aacacaactatgagtagaaagttttatgtgcgtgtgttcacaaaattgta ttttaagctctccctcttttttctttggcattacgattaatttatacgtt gtaactactttttgtaataagcctgtgtgatggagaacgttcttatattt tagcaataacacacacacaaacttttctactccatcgcatgttcaaactc gatactttaattagggacaccctgtacatatGTATTCTTTTTCAGGGGAG AAATGGTGTGGAACAGAGGCTCATGGGAAAAGTTATGATCACGAAGAATC ATATCAACATCTTACACAAGGTCTTTCTAAATGTTGTGACAAACATGATG AATGTCCACTTGGTATGTTTAATTCAATCTTTTCCTTAGGGATACGCTGT ATGCTACTTAAagccttaaagggacataaagaGGGCGGTCAATGAAAAAT CTCGTAtagtaaagattacatcattaatagcataattagtataattatgc tattgtttgggtctccaaccctaaccctaactggaNNCCCTAACTGGAAt gatcgatattcttataaaaaatgtttcttataaaacatcgatatttataa gaaatgtttcttataaaaagtcgaTATTCCTATAAGaaatgtttcttata aggaACCTCCACATCCCCGACCGATAAGAGTGTCCACCCCTTCGTCTTGA TTTTGTGGTATATCATCGCGTgtaataatcgcttgtggttaaAGTTTACG CATGCGCATTATATGTGATGTAGTACATTTATATAACATTACGCAATGGT TTCTTCCAAATATGGTAATACGAGATTTTGCATTGAACTGACtgtaaaag tactgacgaaatttgtaaacaaactgtgtgctgtgggatacaaaatcaaa acaaatgtcacctgtcaaaataaaaaatcaaaccaaatatggctgatttt gattgtttcaattgttttggacacgtgattttaattgttctctttaatga cacgtggttcgcgcaatgtttacattttactacttttatgttaatacaca ggttgcaaaattatatcaatgcaatcaaaacatgtgattaatCGAAAAAG TTCAAGTGATTTTATTCCCGTGTTACTaactttacaacttacagctgttA ACTTTAtcagtgtcaataaattcgaaccgatttgtcttcagactttaatt tagCAGCCTGTGTGTTTTCCTAGATGATATTTGCGTGGCCTGCAGTAGTG TGGTGGCAGGGAGATGGAGCAACTGCCGTTTTCAGCAGTTGTCAacctaa aaaaagaagaaatactcaaaactttccaaaatcccaacttttgaaaattc tcttCCCTGCAGTTTGCCCTAACTCTGGTCAACCCACCTCCTCAATGAGG AGGTGGGTTGACCAGAGGTCAATACTGGTGACCTCAAGAACTAGGTTTTg caaacacccgatttcttaggaaaatcgaaaaatactCATACAATGGCGGA AACAAGATTATATCAAGAACATTAAGTTCaaaaaagaaactgaaaaatgg gTTTTCGATGAATTTCCTCTTATAaccagtggcggcctggcagggggtgc agggtgtgcagtgcaccacccagaaagatctgagaggggcgccaaaagag ctttttagGGGAGGCGCCaaattctttatgatttttaatTGGGCAATTTG GCGCCCTTCGGCACGTTTACAGCGCCTTCTATgagtacaatgttaatttt ttttgcctgcggcgctttattttcttcattttacccTCTTGCAtcctttt tctcaattttttcaaaacatctatcaatattgaatcaaaagtgtatccac caggggttaaagagaatgctcacccccaaaatgagagattgccaaaatga tcaaaacttgttgattctcgctgtggttttgtggtcttatactgactaac tttctccgttTTAGAAGATCTCTTAAGCTGTTTggcctttcttacaccaa aattttttgcctgcggcggaCAATTACAAGGCACCCTTCCTCCCAACTTc tgaatttttggggcctctttcagccattgatctttaatagagagtaaagt aagaccagcggcgcaaaagtttaaatttaatttttctgataagagtttta gaaagcaaaaatatagacTAAATCGACTTACCATCcaggtataaaatttc catttcaaagatTAGGGTTACTTTCAaacagtcactgctcttacagttta atattttcacttgatAATGGAgcgcgcaaataaggacaaaaataccaggg gcgccaatttcatagtttgcaccaccaagaaatttaagccaggccgctac tgctTATAACTTCGGTTTTAAGAGTGCACTTGTAGTGATTTACCCTAGTG AGGATGACGGAATGAAAACTGACGTGATTGTGGGTGTTTTGGTGGTTGAA AAGCCTCTTAAAACCAAATAACATACTATTGCTTcataaattttggatat tcttacataaataaaaaaacgtatgTTTTTCATACAGGAATGTCGCCGCA TTCTCAAAAATGGAACGTCATCAACACATCTGACTACAGTTTGGCTGAAT GCCAGTGTGATGACCTTTTCagagaatgtttgaaaaatgtaaGTTCACAT TTCTTCGTATTTCgtttttgtatgattttaaAAAAGCTCACAAAAGTGTG TATCGCAAGTCTCTCAGTATAATCAATGAATGGCCCCTTACGACGATGCA ACATGCTAACAAAATATATCTCTCACTCATACCAAGAGCTACTTGcacca atttttcattttgctaAAAGATATGATCAGCTGGACATGGACAATTGTGA GCGATATTGGAATCATAAAAAAAACGAACTATAAGGGTCTGGGTGCGAGT TTGCAATCTATCTTTATTGTCCTTTCGGGGTCAAGATACAGGACATATTT TGTTACCGTGTTGCATCGTGGTAAGGGGCCATTCATTGATTCTACTGAGA GAATTGGAGGATATAggttcgattttcaaaaaatatgttCTAATCTTTTA GGCTCTCTCGGGAACAATTTCTAAAACCTTTTAcagttgaaaaaataaat cctttttaaacttttactttttcttctCAGGATGGGAGTTGGTCTGCAGA AACTGTCGGAACTCTATTCTACAACGTTCTCTCAGTCCCTTGTATCACCG TAGAAGAAGGTGCAAACTTAGATGAACCAGGGACCGGCATTGATGGAACA GATCAGCTAGATTACGTCTCTGATATCGGGAACGGCCCTCCCGCCCATTC ACAGGCAGGTGGCTACGGACCACCCGCCCATGGACCGCCTGCCTACTCTC ATGCGGGTGGCTATGGACCACCTGCCCATTCACAAGCGGGCGGCAAAGGT CCAAAACGTGGACTGCCTTCTGTACCTAAGCCTCTTAAAGATTGGATAAA GAGCAAAAATAAAGACAGGCCAGGAGCAGTTATAGTCAAACctaaagaat tttaaaattgaaagttcaacaTTGACCTACTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005550XLOC_005550Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009900-exon-sc0000100-1491911889:117496..117543TCONS_00009900-exon-sc0000100-1491911889:117496..117543Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1510915933:117496..117543TCONS_00009900-exon-sc0000100-1510915933:117496..117543Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1575043694:117496..117543TCONS_00009900-exon-sc0000100-1575043694:117496..117543Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1491911889:118152..118255TCONS_00009900-exon-sc0000100-1491911889:118152..118255Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1510915933:118152..118255TCONS_00009900-exon-sc0000100-1510915933:118152..118255Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1575043694:118152..118255TCONS_00009900-exon-sc0000100-1575043694:118152..118255Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1491911889:129050..129106TCONS_00009900-exon-sc0000100-1491911889:129050..129106Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1510915933:129050..129106TCONS_00009900-exon-sc0000100-1510915933:129050..129106Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1575043694:129050..129106TCONS_00009900-exon-sc0000100-1575043694:129050..129106Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1491911889:129541..129657TCONS_00009900-exon-sc0000100-1491911889:129541..129657Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1510915933:129541..129657TCONS_00009900-exon-sc0000100-1510915933:129541..129657Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1575043694:129541..129657TCONS_00009900-exon-sc0000100-1575043694:129541..129657Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1491911889:131833..131933TCONS_00009900-exon-sc0000100-1491911889:131833..131933Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1510915933:131833..131933TCONS_00009900-exon-sc0000100-1510915933:131833..131933Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1575043694:131833..131933TCONS_00009900-exon-sc0000100-1575043694:131833..131933Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1491911889:132426..132827TCONS_00009900-exon-sc0000100-1491911889:132426..132827Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1510915933:132426..132827TCONS_00009900-exon-sc0000100-1510915933:132426..132827Clytia hemisphaericaexon
TCONS_00009900-exon-sc0000100-1575043694:132426..132827TCONS_00009900-exon-sc0000100-1575043694:132426..132827Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100supercontigsc0000100:117496..132827 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0572222 0.0279003 0.0323949 0.0633868 0.0385836 0.182936 0 1.03539 0.9644 0 0.802085 9.46492 22.7707 20.8584 10.062 13.7232 5.15508 5.53677 0.0304142 0.0705247 1.4849 2.96937 2.54234 2.54823 7.37243 10.4069 0.269838 0.225667 1.66029 0.489836
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009900 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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