TCONS_00009899 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00009899
Unique Name	TCONS_00009899
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	829

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000100:117496..132827+
coding sequence from alignment at sc0000100:117496..132827+

transcript sequence

>TCONS_00009899 ID=TCONS_00009899|Name=TCONS_00009899|organism=Clytia hemisphaerica|type=transcript|length=829bp
TTTGGATTCTGATTTTGAACCATGCCCTGGGAATGAAATGTGGAAAAAat
attTTCAGCTCTTTTATGCTTACCTGATTGTAGTCTTTTTCTATACCATC
ACCGTGGTTCACGCGATATCAAGTAGAAAAGAAAGAAGGGCACTGAAGTT
AGtaCCTGTGCCAGAAGCGCCATTAGAAGAAAATGGAAAGAAGAGATTAA
CCATGTGGGGGGAGAAATGGTGTGGAACAGAGGCTCATGGGAAAAGTTAT
GATCACGAAGAATCATATCAACATCTTACACAAGGTCTTTCTAAATGTTG
TGACAAACATGATGAATGTCCACTTGGAATGTCGCCGCATTCTCAAAAAT
GGAACGTCATCAACACATCTGACTACAGTTTGGCTGAATGCCAGTGTGAT
GACCTTTTCagagaatgtttgaaaaatGATGGGAGTTGGTCTGCAGAAAC
TGTCGGAACTCTATTCTACAACGTTCTCTCAGTCCCTTGTATCACCGTAG
AAGAAGGTGCAAACTTAGATGAACCAGGGACCGGCATTGATGGAACAGAT
CAGCTAGATTACGTCTCTGATATCGGGAACGGCCCTCCCGCCCATTCACA
GGCAGGTGGCTACGGACCACCCGCCCATGGACCGCCTGCCTACTCTCATG
CGGGTGGCTATGGACCACCTGCCCATTCACAAGCGGGCGGCAAAGGTCCA
AAACGTGGACTGCCTTCTGTACCTAAGCCTCTTAAAGATTGGATAAAGAG
CAAAAATAAAGACAGGCCAGGAGCAGTTATAGTCAAACctaaagaatttt
aaaattgaaagttcaacaTTGACCTACTA

Run BLAST on NCBI

protein sequence of TCONS_00009899-protein

>TCONS_00009899-protein ID=TCONS_00009899-protein|Name=TCONS_00009899-protein|organism=Clytia hemisphaerica|type=polypeptide|length=266bp
LDSDFEPCPGNEMWKKYFQLFYAYLIVVFFYTITVVHAISSRKERRALKL
VPVPEAPLEENGKKRLTMWGEKWCGTEAHGKSYDHEESYQHLTQGLSKCC
DKHDECPLGMSPHSQKWNVINTSDYSLAECQCDDLFRECLKNDGSWSAET
VGTLFYNVLSVPCITVEEGANLDEPGTGIDGTDQLDYVSDIGNGPPAHSQ
AGGYGPPAHGPPAYSHAGGYGPPAHSQAGGKGPKRGLPSVPKPLKDWIKS
KNKDRPGAVIVKPKEF

Run BLAST on NCBI

transcript from alignment at sc0000100:117496..132827+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00009899 ID=TCONS_00009899|Name=TCONS_00009899|organism=Clytia hemisphaerica|type=transcript|length=15332bp|location=Sequence derived from alignment at sc0000100:117496..132827+ (Clytia hemisphaerica)
TTTGGATTCTGATTTTGAACCATGCCCTGGGAATGAAATGTGGAAAAAGT
ATGGAAATGattctttttatcaaaatttctatTCTTAGTTAATTATTTTT
GCATTCAGTCAAATGTCTTATTAAGTTTTCTCAATTCATTAAAGTAGCAT
TGATTCAAAGCATCAATTTgtacaaaaatgaattttatgttGCAAAATCA
GCCCTTTTACAAGAAAATTGGTACCGAGAAGACCAAATTAAGGTGCTCTC
TGGTTGTCAAAATCCCCAGAAAAATTAGTAAATGTGTACTTTGCGGTGGT
ATGCAAAAACATCTCGAAAACCCTTTTATATATCAATCTCTTCGATTTTA
GTACCGATCCCCTGTTAAATTTAGGCTGAATTTGGGATCCTAATCTATGT
ataaatattttaagatgattctctcaaaaaaactaaaaaatccaCCGATG
AAAtgtaaaaagcgtgtatcttaCCGCCATGTAGACAGCAAAGAGGATAC
CTAACTGGCACACAAACGTTGTtgcaacgttcatctaacgttcacaacgt
ccacataacgttagatgaacgttgaaacaacgttgtgtgccagctgggta
aaaACAGTCAAATGTCTCTCTTGTGTAATGATCTTTAAACtcgttttttt
atttagatattTTCAGCTCTTTTATGCTTACCTGATTGTAGTCTTTTTCT
ATACCATCACCGTGGTTCACGCGATATCAAGTAGAAAAGAAAGAAGGGCA
CTGAAGTTAGGTAAGGATTGAGACTCTCAAGCGATGGTAAGGTATGGTAT
TTTGATTTCACAGATTAACTTTCCAccgttggaaaaaaatcattatatcA
GGCTCTCTAgaattatttaaaggttttatttttacataagtgttcctgtt
tcatatcaggacagtgtcttcctattgttattaTGCtgttataagcaaaa
aatgtttttcttttcctatttctgaccaatcttgctccacatccgtgtca
atcactatcatttaaaaacaaaaccttgctgatttcaaatatatattcat
ATCTTGAccatttttcttagaaaaaaatttacagCCTTTTGAGGTTGCtc
tattttggcaaattttggtCGTTATAGGCCTTCCTTGGACTGTAACTTTA
TATTCATAACGAATAcgaaaaatttaatcaaaaatttaaaatcagaaagg
tttattttctaaaaagtttGATGTCGTGATTTTTTAAACCAATAGAAAAC
CAAATAGATTCTTCTTcttactaatatctttccaacgatgtgTATAGACT
GATgtatgattttcattttttttagtaCCTGTGCCAGAAGCGCCATTAGA
AGAAAATGGAAAGAAGAGATTAACCATGTGGGGTAAGAtaattacagttg
actctctctaattcgattttcaagatgAATCGGGTTtccatcgaattaga
gaaatattcgaataacaGATGGCAATTTAAACGACTTCCTAGATGAGGGG
gccaatattttagttcaaaTTACATAAAGATTCGGAATTTAGGAGAGTTG
ACAattacaccttttcgaccgtagtcgtgcgatcaggcgcgtgccacttt
tatCCCGCTAAActcaatccaatcctttttaGACACATTTTTATAATGTC
TATTGGtgcaaaaaaaggactgggacggttttactgggataaagtggaca
aaaaatGGTGTATTACTATTTATCAGGTACGTCAGAAATAAGTTATCCCC
TTTGATCTAAAATTTCTgtatcaattttttaaaataaatcaaatcttCGT
CAGAAGACAGAATTCTTTTGATTTCATATTCAACTTTTAATTTAATTCAA
CAAATTATCTAATAGAATTTATCTATTAAATTAATCTTTCCTTTTTCAAA
CGAAAGAAGGTTgattcttaaaaaataatagaactttttttttaaagagg
gtAGCCTATTTTTGGTAGACTGGGTAAGTTCCAGGATGTTCCTGTTATCA
CGGAGGAAATTTGATAGTACCCTATTTGACAAGACTAATCCATGGCAAAA
TCCAGGGGGCACTTCGgtaaaattgggtacggggacgtaCCGTTGGTTAG
TGTCTCTTTTtcaggctctgaagatatctgacagggtccaaaaTTTACCA
ACTCTTAAGGTGTGTATCTGATAGGATCAACTTTTGGTAATTGTTGACAA
TTTCCAGGTTGGAAAATTCTTCGTTTTAGTTATTTTGGCCACTTTTAAGG
GTGAATATGTGAAAAAtgtgaaagatttttttcggacaaattTACCTAAT
AttgatatctgacagggtccattttAAAACTCCAGCGGCATGTCTCTGTC
CGTCCTCATAGGCCAGTGCCTCTCCCCCCCCCGGTGGCAAATCTAATTTT
TAggaacaagttttttttttaaagtaaatgaCTGATGACTGATTTGTCAA
GTATTTAGACCCCTGCAAATTAAATCTCTCCCATTTAGGATAGCCGAttg
tattgattgattgattgattgattgattgattgattgattgattgattga
ttgattgattgattgattgattgattgattgattgattgattgattgtag
GTGAGAAATGGTGCGGAAGTACaattaaagagaaagtattGCAAGAAGAT
TCAAGTACACCAGAGACTCTGACTTCCGGTTTGGAGACCTGTTGTAATTT
ACATGACGATTGCCCACtcggtatgacttttttcattgttttgtattttt
attttaactatGTGGCATAAATCCTGAACCTTAATTTTGCCGAATTTCAG
TTAAAGTCAGAACTTGCTGCATCGCCAAAATAGGTTTTTTCCacaataca
ccttatcggagtttttgatttttctaaaaaagcattgcattgtgggattg
tttcgggggtatcaaaatagaattccctcgaggaattcctaagattTCTA
TTGtgatactcccgaaacaatctcataatgcatcgcttttttagaaaaat
caaaaactctgataagatCTATTCTTATCTTTTATAGAAATAGCccctgt
ttttctttaaaacgcTCATTTTCAGGCAAACAATAACGACTATATATCTA
CGTCTTGCCAAAGTTCTCTCTGGCCAAAATCCCTATAAagtgccatggtg
attaacttttagcggattttattaaaactactttctatttataaaaaaaa
tcatttaatgtctcaagggacataatcaccatggtaattgttcgTGGCGT
AATttaagaaaaggtctatttattcACATAGTAATAAGGGTAGACATTCC
GGGGCAGTGGATTACCAAATGACGGTATGTgtggcgaaaaaattggctct
GTCTGACCCACCCATTTTAAGCCTTAAAACgcagttttttttgctcattt
gATAAcgattttgaccaaaaatatcctacatccgccaaattaaattcccg
ccaaaatttcttcctttaaggtagacaTTTGCCTGTCCAAAATTTTAGTC
GTTCTTAAACGAGTTTCATTTACTGTTATTTCAAGGTATGCCACCAGACT
CACAGAAGTGGGACACAGTAAACAACTCAGAGTACAGTCTAGCTGATTGC
CAATGTGATAATCTCTTCTACAACTGCTTGAAAACGGTTTGTATGATATT
ATATAATCGCTTTTGTATAAATTAGGGTGGCTCTAAATCTGAAAACTACC
GTATTAGCTTTCAAAATCGTATAGTGCACCTGTAtggtgcagagaaaatt
tacccaaatttgagtaaattgttCGTTTGGAAAGGtcttttaaaattaaa
taaCCATCATGAACGAGATTTAGCTAAATAGTGAATAGTACAGAAACAGT
CAAAACTACTTCTCCGTAAGGTCCTACTTTGATTTCATACACCCTGATTT
ACTTAAAAGATATCTAAAAGTCATAGATATCTGAAAGTCATAAATATCTG
AAAGTCTGTAACTGCTATTCTATCTTCCTTGTCATGCGAACGTAACTTAA
TAACAGCTGTAGAAAGTCTGAATGCGACAAGCTGATGTTCTAAAGATCGC
TGAAAACTGTATATTTTCGCAAACGCTTCACCGTACTAACACAGTATCTG
CTATCAAGTTACGTCAACGgatctatttctattttatcGCACTCAGGACG
GTGGATGGTCGGCAGAAACAGTGGgccgtttttttttcaatgttctTTCT
ATACCATGCGTCGAAATTGAAGACGGCGTCAATTTGGATGAGCCAAGCAC
AGGAAAATCAGAGACTGGTCAACTAGACTATGCAGCTGAATCGGCTAAAC
ATAATAACGGAAATGGAAATGGAAATGGGAACGGAAATGGAAATGGGAAC
GGTAATGGAAATGGGAACGGTAATGGAAATGGGAACGGAAATGGAAATGG
CAACGGAAATGGTGGCTATGGAAATGGACCAAGACGAGGTTATGGAAATA
ATAATAAACCACCTCATAAGCCACATGCGAAAATTGTTAAAGCGAGATTG
TTTTGATTAACCAAATCGATTGCTTGGTTTAAACTTGGTTTCTAACTATC
CATGATATGCATCATTACAATGTATTTCACGAACCCAACAGCtcattggt
tgcaagtgacgtattaaatgattttacgtcacttaaacaaccaatcagct
gttggttacatcagaagacattgcaatggcgcATATCATGAAGTGCTATC
TTCCAAAGGCGCACTGCTCGTAGATATTGTGATAGAGTTAAATGTCggat
attttttggaaagtcAACCAAGAATTGTGAATACCATCTTTTTGTACGTC
TATAAGACGTCCATAAGACTTTAGATCAAGGTCCAGATGGCATCGTGTGT
GAGCTCTACTTATTTACCAgaaatttatcgaaaaatgaTTTACGTATATT
AAAAATCCTGGTGAGaggtagcctggagatccatgttatgatttttatat
ACTGACGGCGAAATGATTACTACATGGTTTGGGCAATGTGTTTGAATTCC
TCATTCTTCAAATGATAGTTGAAAAACACAGCCaataaaattttgttatt
ctttccctagtcacactttcttagagaaaacgcaagttcccaaacttgtt
ttaattttagtaagtgaggacagcgctataaattcgaaatttcctactgt
aaattttttgagacaGAATCCGTCTTGTGTATTAGCCCATGAGCTAGACA
CTTTTTGGGGCTCACTCGACGGAGGAAGCCTCACTATGATTTTCGGAAGC
CTTAACTactatattttaagaaaaatcagggtgcttttttcaaacttaca
gCTTTTGACcgaattttcaacttttttagggGGTGGTAAACGctaaattt
tcatatttgcTTGGATTTCCTTAGGAAATGAAATTATCATGTCATCTTTA
AAATAGTACATCTCGGTCAATAATGTTCAAAAATGCAccaaattttcaag
aattaCTCCTAAtatactaattttttttaaactgaaaaaaaattgaaaaa
taattttctagggGGTTTGTACCGGAGAAAACTACCGAAAAACCGGAATT
TTAGccattgtttgcattttttggaattatttCCTTAGTTGATTATCACA
TTTCATCTCTAAACAGTGTTATTTGGGTTTCTTTACATAAATATAttaga
aatatgagaaaaatgGTAGGTTTGGGTCCGACTGGGGGGTGTCCGGACCA
AAAAACGGCGAAAAACTCCGGAAAATTGCcatttttgacccattttagCC
TTACTTTCATATTTGGTCCCTGAAATATGAATATTATGAGTTGTGTGAAA
TCGTTTATCCATAAAGTTCTGTAAAGAAAATGTAAAGCAATGATTTTGGA
CCATTTCAGGTGGTTTCCGGaccaaaaaaggcgaaaaaccccggaaaatg
gccatttttgacccattttagtcttattttcaaatttaatcccTGTGAAG
TACGAAATTTATGAGTTGTGTGAAATCGTTAATCTATAAAACTCAATAGT
GAATGGGTTAAGAGATGATTTAGGACTATTTCAGGTGGTTTCCGGACCCA
AACAATGCGAAGGTAGGGGCATGACCGTACATGTCGCAAACAAACTTTTG
GATGTTTTCGTGCGTATTTCGTTTCTCCCAAGCGTGAAAATAGTTCCACA
TACTCTTTCTTCTTCGCCATTAATTTGAATGGTTTGGTCTTTCCTTTACC
AGAAAAGGCGCTACCTGTATCGCAGCCAGTGAAAGCGTGAATTCCTAGAG
GAGCTTGACTTGGCAGATCTAGGTCTTGATCAGGGAAACGTTTCTTCAGG
GAGGATCTTATTCTCTGAATGGAGATTGTTCGGGCTTTTTCCTTTGTCTC
TGTTCGGATGAACATTTTCGGCTGAATTTCTGTCGATGCTGCGATGGTAA
TCAAGAAAACATCTGTATCCGGGGTATGTATGATGATGTTCCCGAATCCA
GCTTGACTCATGTGGTTAGCATGAAGAAGCATGCGGGTGTCGGCCTCTTC
ATGGTTGCATGATAGCTCTGGCACATTTTCATCTGTGAGATTGGACATCA
GCTTTACACATATGCCTTCGTATGCAACGTAAACGATTCGATCGCCTACA
TCATATTGGTCCCATTACTTGACAAGGTACTCGATCAAagcttttttgtt
gttgctaCTCGACAGGAAGGCACCCCATTGTTTGATCAACTGACTTccaa
tgatttttttgaattgcagTTTACCAACAGCACGGTGAACTCTTTCAGCA
TTCTTGATAGATGAGTCCAAATATACATCGAAAACTATATCATTCTTTAG
GATGCAGGGTTGTGTTCGATGATGGACTACATCATTTCATCTGCAAACTG
TTGGTACGTCTTGCCCTTGGTTTTTTGCTTCCTAACAAGTGCTTTTCCGT
CAATGATTGTGGAATATGGCTTCGGGTGCACTTGTTGAGGTGTTGTTTCT
TTTTCGATTCGTGCATGAATGTGGCTTTGTTGGTTTTGACCAGCTCACCA
GTACTGCTCGATAAAGACTAAGATACTGGTCCCAACGGATAGTGGAAAAC
TTCTTTCAGGTCGGGTGATTGTGTCTGCTGAAATTATACTGCACCAAAGA
TAGTGCTTTGCTCGCTGACCTCCTTTGGTTTTGACTGCCGCTGCTTTCAG
TTTGGTAATGAATGTGCCCTTGGGCTTGTGAAGATTTTAGGACCTTCTAG
AATTGCTTTTCTGGGACTAAATCATCCCTATTCTCTAAAAATACATTATG
AAGATTATTTAGCTGCACTTAtacctaaagtctgtccagatataattggc
agtggaaacaagtaATAagttagtaataagttggagatttgatatttcac
agaaaagtgctaccaaggggtatttcgggtcccatatcttccgaaggact
tttctatttgcctcgaaatttaagaaacttcttaacctaaggttgaacta
ccactggtgtaaagaTGAACGTTATaacataagtagaaaaaaagctcaat
ttttgcaatcgcaaatttaaccactaaaaatcgcgaatttttcaaccaaa
aatacattcaaatatagcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNttctctaaaacaagcaaaaaagatttccataatt
atatttgactatcaaaagttacaggcattcttgtttccactgccaattat
atctggacagactttaatattGAGCTAAAACATTATCTAagctaaaaaaa
tcaaaaatggctATTTTGTTTTTTGGGTCCGGAAACCACCTGAAATAGTC
CTAAATCATCTCTTAACCCATTCACTATTGAGTGTTATAGATTAACGATT
TCACACAACTCATAATATTCGTACTTCACAgggattaaatttgaaaataa
gactaaaatgggtcaaaaatgGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttcgccttttttggtCCGG
AAACCACCTGAAATGGTCCAAAATCATTGCTTTACCTTTTCTTTACAGAA
CTTTATGGATAAACGATTTCACACAACTCACAATTTTCATATTTCAGGGA
CCAAATATGAAAGTAAGGctaaaatgggtcaaaaatggccattttccggA
GTTTTTCGCCGTTTTTTGGTCCGGACACCCCCCAGTCGGACCCAACCTAC
catttttctcatatttctaaTATATTTATGTAAAGAAACCCAAATAACAT
TGTTTAGAGATGAAATGTGATAATTAACTAAggaaataagtccaaaaaat
gcaaacaatagCTAAAATTCCGGTTTTTCGGTAGTTTTCTCCGGTACAAA
CCccctagaaaattatttttcaataggAAATCCAagtaaatatgaaaatt
tagcGTTTACCACCccctaaaaaagttgaaaatatcggTCAAAAGctgta
agtttgaaaaaagcactctgatttttcttaaaatatagtAGTCAAGGCTT
CCGAAAATCATAGTGAGGCTTCCTCCGTCGAGTGAGCCCGATTTGCCAAA
ATCTGGCCTCTAGCTCATGGGcatatcagattataaaaatatagaacggg
tctcctgtctagtcGACAGGAAAAAACACACAACTAAAAAGTAAAGTAAT
TTTGGGTTTATTGGCCATAACCATAGAATATCGGCGGCGGTATAGTTTTT
GCGGCGAAAATCTGTGTGCAAAGATTTCATTAAAGTTAGAcgctattttt
tataaaaatattcatgatgagattggccaaaaattaagaacatcctaaga
atATGACACCAtcatgatgaaatttggcaacagaagctaagaatgccatt
tttagagcatttccATACTTtcacaaaagtgccattttatgctttcatat
gtattaaatgttaaatctagtctaaattaggatcctaacctaagaatact
gtaagaatattttaggaagattctctcaaaaaagttaagaatgaaatcca
tcatgaaatgaaaatacacgatttgtttaaaaaaagtgtttaaattATAA
GCTGCTTTAGATTTCTTTTTCGTTCATTTTGCACGGTTGACTGAACAAAT
ATAATTGCAAGATTGTtcaagttttataaaaatatgtttgttttttcata
tTGTGAATTATTAGAAAATGTAACAAATTTCATTAAACATTCAGtatttt
ttgacagattttaagTGTAAATTTGAGACTTGATTTTTCTGAGGTGCACA
GAGATAGGATGTGGCTGAGGTAACAATATCAATTTATACATATTTCTTTT
ATgagtaaaaattaaattttgtgattttgcgaATTTCtaccattttcatg
aaattgattACTGACTCCAGAAATTAAATCCATggcgaaattttcgaaat
cGCATATGCGGCGGAGGAGCTAGTAAAAATCCTCTTTTGGTGGAGAAGAA
TAGCAATTTTCACCtgactttttggctttttcgcgaaattaaactCACAC
GAAACTTTCAAAACTCCGACTCgctaaattaaatccagaaaatttcgcaa
aTCTTTTAccttgcgaaatttaatctcgcgaaattcaatccgattaaagt
aaaaCCCCAATTTTCGGCTCAGGGCTCGAGTAGGATATTCCGGATTTCAG
CCAGAAACTTGTTTATGACTTTTGAGCCGAAAATGCGTAGCAACTTATTC
AAAAATGTTTGCTTTTCATCTTATTTTATGTCCAAAATACCCCAAATTTG
GTATTCAAGTACCATCAGTACACATCTTAATGCTAAAAATGCCTCTTTCT
TCTCTAGgtattttttgttgcttttccTGATTACGCTCAGTTTCAGAGCT
AGGCTGCTAAGGCCAAGTTACTTAATTTTGTGGCCATTTTCAGTACTGGA
Cccttagcaactcggttgcttataaaaaagaagtctttatgttgggaaat
tcaccggggagTTTTGAAACCACCATTGATTTGTAAGTGTTCCAAACTAG
GTTCGAAGGGtcgagttttaacactagacttaggACTCAGGGCCTTAGGG
TCTGAGGAtccaaatgttcaaaaataatccaataaggctcagaatatagc
ctggaagtctgccaaccccttccaaattgaaatattcgattaaattaaag
aaatagcccaaaatcgactttctcgccggaactttaaatcttgaaaaacg
ttaaaataaccagaaTTCTctatatatttcaaccatgattgtagaccTAT
CTTCCCCACATACTTTATCAGAGTGGTGGAGTCGATTGTTTTAGACACAT
GTTTAGCGAACAAGCGCGATGCGGAAGTACATTTTTCTCGATGTCCGTGA
ATTATGAGCGGGTTATGATTTTATGACTTCAGTTTTTCCACATTTTTTGA
GAATTCGAAAAtgattttgtaaaagaaatttaatactCGCTTTTTATCAA
AGTGTTAGTCTTATCGATCCTCTTAGTCACAATTTCATGCCTATTTCAAA
AACATAACTATTTCATGAAATGTTTTATGATAATCATGACGCAATGTTTA
AAAGAAACACCTCAAATAGCCCAGGCGTTTGTCAATGGTTTTATGGATTT
TCTGGGTGCTCATgtatcccagctgacacacaacgttttttcaacgttca
tctaacgttataatatggacgttgtgaatatcagaaaaacgttaaaacga
cgTTGTGTTCCAGCTGGGATAAAACATTCCGTCATTAATTTAAATTAATA
TCATATGAACATAATGTAAAAATCGagaaattagtttttttacaaaatca
ttTTCTTGTCACCAGGCCACTGAAGCTGCTTTTTGCTTACCTGATCACAA
CATTTTCCTACACCATCACGAGTGCTCACGCGAAACCCAATACCAAAGAA
AAACAATCGAATGAATTAGGTAAgaattttatagtttttttttcaaccta
aGTGTAGTTATTGTATACTCGTCTCAATTTCATACTCTTTCTTTACATCa
atagttgacgctctcttatttACCAATCTGGAAAGGAGGTAAATGTTACG
CCGGAGCTGCGCCAACTTAACTGGGAAAAGTTGAAGGCAGTAGATCTCAA
ACCTCAAATCTATGCCGGAAATATCCGGCGCACAAGCCGCAATTtcctac
tctgtaccagagtgtatctcacatCGCTTCGTatcggcaatgaattttga
aattagccgtagatatcgggtctgtgtacagacaacaaTTTCCAGACTGG
CTTATTTAACGTTCtgctattcgatacgctccatttttttattataatat
tgAATGAAAGTCACCGTCATCAAGAAACTCATAAACAGTAGAGTACTGAA
TGTTACTGGATCAGTGAAAGATCGTGCTtagatttttcattatttttttc
ttagtaCCTGTACCAGAAGCGCCATTAGAAGAAAATGGAAAGAAGAGATT
AACAATGTGGGGTAAgataaatatcttttaaaattgaCTCTCTAATTCTA
ATTCCATCTTCAAGaggaatcggattttcatcgaataagggagtgcATCT
GTCATCTAGTCATCAAGACCAGATTTAAAACAACTTcagatttgcagatt
tgaaGATCTTCTAaccatacagggtgtccctaattaaagtatcgagtcga
aacacaactatgagtagaaagttttatgtgcgtgtgttcacaaaattgta
ttttaagctctccctcttttttctttggcattacgattaatttatacgtt
gtaactactttttgtaataagcctgtgtgatggagaacgttcttatattt
tagcaataacacacacacaaacttttctactccatcgcatgttcaaactc
gatactttaattagggacaccctgtacatatGTATTCTTTTTCAGGGGAG
AAATGGTGTGGAACAGAGGCTCATGGGAAAAGTTATGATCACGAAGAATC
ATATCAACATCTTACACAAGGTCTTTCTAAATGTTGTGACAAACATGATG
AATGTCCACTTGGTATGTTTAATTCAATCTTTTCCTTAGGGATACGCTGT
ATGCTACTTAAagccttaaagggacataaagaGGGCGGTCAATGAAAAAT
CTCGTAtagtaaagattacatcattaatagcataattagtataattatgc
tattgtttgggtctccaaccctaaccctaactggaNNCCCTAACTGGAAt
gatcgatattcttataaaaaatgtttcttataaaacatcgatatttataa
gaaatgtttcttataaaaagtcgaTATTCCTATAAGaaatgtttcttata
aggaACCTCCACATCCCCGACCGATAAGAGTGTCCACCCCTTCGTCTTGA
TTTTGTGGTATATCATCGCGTgtaataatcgcttgtggttaaAGTTTACG
CATGCGCATTATATGTGATGTAGTACATTTATATAACATTACGCAATGGT
TTCTTCCAAATATGGTAATACGAGATTTTGCATTGAACTGACtgtaaaag
tactgacgaaatttgtaaacaaactgtgtgctgtgggatacaaaatcaaa
acaaatgtcacctgtcaaaataaaaaatcaaaccaaatatggctgatttt
gattgtttcaattgttttggacacgtgattttaattgttctctttaatga
cacgtggttcgcgcaatgtttacattttactacttttatgttaatacaca
ggttgcaaaattatatcaatgcaatcaaaacatgtgattaatCGAAAAAG
TTCAAGTGATTTTATTCCCGTGTTACTaactttacaacttacagctgttA
ACTTTAtcagtgtcaataaattcgaaccgatttgtcttcagactttaatt
tagCAGCCTGTGTGTTTTCCTAGATGATATTTGCGTGGCCTGCAGTAGTG
TGGTGGCAGGGAGATGGAGCAACTGCCGTTTTCAGCAGTTGTCAacctaa
aaaaagaagaaatactcaaaactttccaaaatcccaacttttgaaaattc
tcttCCCTGCAGTTTGCCCTAACTCTGGTCAACCCACCTCCTCAATGAGG
AGGTGGGTTGACCAGAGGTCAATACTGGTGACCTCAAGAACTAGGTTTTg
caaacacccgatttcttaggaaaatcgaaaaatactCATACAATGGCGGA
AACAAGATTATATCAAGAACATTAAGTTCaaaaaagaaactgaaaaatgg
gTTTTCGATGAATTTCCTCTTATAaccagtggcggcctggcagggggtgc
agggtgtgcagtgcaccacccagaaagatctgagaggggcgccaaaagag
ctttttagGGGAGGCGCCaaattctttatgatttttaatTGGGCAATTTG
GCGCCCTTCGGCACGTTTACAGCGCCTTCTATgagtacaatgttaatttt
ttttgcctgcggcgctttattttcttcattttacccTCTTGCAtcctttt
tctcaattttttcaaaacatctatcaatattgaatcaaaagtgtatccac
caggggttaaagagaatgctcacccccaaaatgagagattgccaaaatga
tcaaaacttgttgattctcgctgtggttttgtggtcttatactgactaac
tttctccgttTTAGAAGATCTCTTAAGCTGTTTggcctttcttacaccaa
aattttttgcctgcggcggaCAATTACAAGGCACCCTTCCTCCCAACTTc
tgaatttttggggcctctttcagccattgatctttaatagagagtaaagt
aagaccagcggcgcaaaagtttaaatttaatttttctgataagagtttta
gaaagcaaaaatatagacTAAATCGACTTACCATCcaggtataaaatttc
catttcaaagatTAGGGTTACTTTCAaacagtcactgctcttacagttta
atattttcacttgatAATGGAgcgcgcaaataaggacaaaaataccaggg
gcgccaatttcatagtttgcaccaccaagaaatttaagccaggccgctac
tgctTATAACTTCGGTTTTAAGAGTGCACTTGTAGTGATTTACCCTAGTG
AGGATGACGGAATGAAAACTGACGTGATTGTGGGTGTTTTGGTGGTTGAA
AAGCCTCTTAAAACCAAATAACATACTATTGCTTcataaattttggatat
tcttacataaataaaaaaacgtatgTTTTTCATACAGGAATGTCGCCGCA
TTCTCAAAAATGGAACGTCATCAACACATCTGACTACAGTTTGGCTGAAT
GCCAGTGTGATGACCTTTTCagagaatgtttgaaaaatgtaaGTTCACAT
TTCTTCGTATTTCgtttttgtatgattttaaAAAAGCTCACAAAAGTGTG
TATCGCAAGTCTCTCAGTATAATCAATGAATGGCCCCTTACGACGATGCA
ACATGCTAACAAAATATATCTCTCACTCATACCAAGAGCTACTTGcacca
atttttcattttgctaAAAGATATGATCAGCTGGACATGGACAATTGTGA
GCGATATTGGAATCATAAAAAAAACGAACTATAAGGGTCTGGGTGCGAGT
TTGCAATCTATCTTTATTGTCCTTTCGGGGTCAAGATACAGGACATATTT
TGTTACCGTGTTGCATCGTGGTAAGGGGCCATTCATTGATTCTACTGAGA
GAATTGGAGGATATAggttcgattttcaaaaaatatgttCTAATCTTTTA
GGCTCTCTCGGGAACAATTTCTAAAACCTTTTAcagttgaaaaaataaat
cctttttaaacttttactttttcttctCAGGATGGGAGTTGGTCTGCAGA
AACTGTCGGAACTCTATTCTACAACGTTCTCTCAGTCCCTTGTATCACCG
TAGAAGAAGGTGCAAACTTAGATGAACCAGGGACCGGCATTGATGGAACA
GATCAGCTAGATTACGTCTCTGATATCGGGAACGGCCCTCCCGCCCATTC
ACAGGCAGGTGGCTACGGACCACCCGCCCATGGACCGCCTGCCTACTCTC
ATGCGGGTGGCTATGGACCACCTGCCCATTCACAAGCGGGCGGCAAAGGT
CCAAAACGTGGACTGCCTTCTGTACCTAAGCCTCTTAAAGATTGGATAAA
GAGCAAAAATAAAGACAGGCCAGGAGCAGTTATAGTCAAACctaaagaat
tttaaaattgaaagttcaacaTTGACCTACTA

Coding sequence (CDS) from alignment at sc0000100:117496..132827+

>TCONS_00009899 ID=TCONS_00009899|Name=TCONS_00009899|organism=Clytia hemisphaerica|type=CDS|length=4806bp|location=Sequence derived from alignment at sc0000100:117496..132827+ (Clytia hemisphaerica)
TTGGATTCTGATTTTGAACCATGCCCTGGGAATGAAATGTGGAAAAAata
ttTTCAGCTCTTTTATGCTTACCTGATTGTAGTCTTTTTCTATACCATCA
CCGTGGTTCACGCGATATCAAGTAGAAAAGAAAGAAGGGCACTGAAGTTA
GtaCCTGTGCCAGAAGCGCCATTAGAAGAAAATGGAAAGAAGAGATTAAC
CATGTGGGGGGAGAAATGGTGTGGAACAGAGGCTCATGGGAAAAGTTATG
ATCACGAAGAATCATATCAACATCTTACACAAGGTCTTTCTAAATGTTGT
GACAAACATGATGAATGTCCACTTGGAATGTCGCCGCATTCTCAAAAATG
GAACGTCATCAACACATCTGACTACAGTTTGGCTGAATGCCAGTGTGATG
ACCTTTTCagagaatgtttgaaaaatGATGGGAGTTGGTCTGCAGAAACT
GTCGGAACTCTATTCTACAACGTTCTCTCAGTCCCTTGTATCACCGTAGA
AGAAGGTGCAAACTTAGATGAACCAGGGACCGGCATTGATGGAACAGATC
AGCTAGATTACGTCTCTGATATCGGGAACGGCCCTCCCGCCCATTCACAG
GCAGGTGGCTACGGACCACCCGCCCATGGACCGCCTGCCTACTCTCATGC
GGGTGGCTATGGACCACCTGCCCATTCACAAGCGGGCGGCAAAGGTCCAA
AACGTGGACTGCCTTCTGTACCTAAGCCTCTTAAAGATTGGATAAAGAGC
AAAAATAAAGACAGGCCAGGAGCAGTTATAGTCAAACctaaagaatttta
aTTGGATTCTGATTTTGAACCATGCCCTGGGAATGAAATGTGGAAAAAat
attTTCAGCTCTTTTATGCTTACCTGATTGTAGTCTTTTTCTATACCATC
ACCGTGGTTCACGCGATATCAAGTAGAAAAGAAAGAAGGGCACTGAAGTT
AGtaCCTGTGCCAGAAGCGCCATTAGAAGAAAATGGAAAGAAGAGATTAA
CCATGTGGGGGGAGAAATGGTGTGGAACAGAGGCTCATGGGAAAAGTTAT
GATCACGAAGAATCATATCAACATCTTACACAAGGTCTTTCTAAATGTTG
TGACAAACATGATGAATGTCCACTTGGAATGTCGCCGCATTCTCAAAAAT
GGAACGTCATCAACACATCTGACTACAGTTTGGCTGAATGCCAGTGTGAT
GACCTTTTCagagaatgtttgaaaaatGATGGGAGTTGGTCTGCAGAAAC
TGTCGGAACTCTATTCTACAACGTTCTCTCAGTCCCTTGTATCACCGTAG
AAGAAGGTGCAAACTTAGATGAACCAGGGACCGGCATTGATGGAACAGAT
CAGCTAGATTACGTCTCTGATATCGGGAACGGCCCTCCCGCCCATTCACA
GGCAGGTGGCTACGGACCACCCGCCCATGGACCGCCTGCCTACTCTCATG
CGGGTGGCTATGGACCACCTGCCCATTCACAAGCGGGCGGCAAAGGTCCA
AAACGTGGACTGCCTTCTGTACCTAAGCCTCTTAAAGATTGGATAAAGAG
CAAAAATAAAGACAGGCCAGGAGCAGTTATAGTCAAACctaaagaatttt
aaTTGGATTCTGATTTTGAACCATGCCCTGGGAATGAAATGTGGAAAAAa
tattTTCAGCTCTTTTATGCTTACCTGATTGTAGTCTTTTTCTATACCAT
CACCGTGGTTCACGCGATATCAAGTAGAAAAGAAAGAAGGGCACTGAAGT
TAGtaCCTGTGCCAGAAGCGCCATTAGAAGAAAATGGAAAGAAGAGATTA
ACCATGTGGGGGGAGAAATGGTGTGGAACAGAGGCTCATGGGAAAAGTTA
TGATCACGAAGAATCATATCAACATCTTACACAAGGTCTTTCTAAATGTT
GTGACAAACATGATGAATGTCCACTTGGAATGTCGCCGCATTCTCAAAAA
TGGAACGTCATCAACACATCTGACTACAGTTTGGCTGAATGCCAGTGTGA
TGACCTTTTCagagaatgtttgaaaaatGATGGGAGTTGGTCTGCAGAAA
CTGTCGGAACTCTATTCTACAACGTTCTCTCAGTCCCTTGTATCACCGTA
GAAGAAGGTGCAAACTTAGATGAACCAGGGACCGGCATTGATGGAACAGA
TCAGCTAGATTACGTCTCTGATATCGGGAACGGCCCTCCCGCCCATTCAC
AGGCAGGTGGCTACGGACCACCCGCCCATGGACCGCCTGCCTACTCTCAT
GCGGGTGGCTATGGACCACCTGCCCATTCACAAGCGGGCGGCAAAGGTCC
AAAACGTGGACTGCCTTCTGTACCTAAGCCTCTTAAAGATTGGATAAAGA
GCAAAAATAAAGACAGGCCAGGAGCAGTTATAGTCAAACctaaagaattt
taaTTGGATTCTGATTTTGAACCATGCCCTGGGAATGAAATGTGGAAAAA
atattTTCAGCTCTTTTATGCTTACCTGATTGTAGTCTTTTTCTATACCA
TCACCGTGGTTCACGCGATATCAAGTAGAAAAGAAAGAAGGGCACTGAAG
TTAGtaCCTGTGCCAGAAGCGCCATTAGAAGAAAATGGAAAGAAGAGATT
AACCATGTGGGGGGAGAAATGGTGTGGAACAGAGGCTCATGGGAAAAGTT
ATGATCACGAAGAATCATATCAACATCTTACACAAGGTCTTTCTAAATGT
TGTGACAAACATGATGAATGTCCACTTGGAATGTCGCCGCATTCTCAAAA
ATGGAACGTCATCAACACATCTGACTACAGTTTGGCTGAATGCCAGTGTG
ATGACCTTTTCagagaatgtttgaaaaatGATGGGAGTTGGTCTGCAGAA
ACTGTCGGAACTCTATTCTACAACGTTCTCTCAGTCCCTTGTATCACCGT
AGAAGAAGGTGCAAACTTAGATGAACCAGGGACCGGCATTGATGGAACAG
ATCAGCTAGATTACGTCTCTGATATCGGGAACGGCCCTCCCGCCCATTCA
CAGGCAGGTGGCTACGGACCACCCGCCCATGGACCGCCTGCCTACTCTCA
TGCGGGTGGCTATGGACCACCTGCCCATTCACAAGCGGGCGGCAAAGGTC
CAAAACGTGGACTGCCTTCTGTACCTAAGCCTCTTAAAGATTGGATAAAG
AGCAAAAATAAAGACAGGCCAGGAGCAGTTATAGTCAAACctaaagaatt
ttaaTTGGATTCTGATTTTGAACCATGCCCTGGGAATGAAATGTGGAAAA
AatattTTCAGCTCTTTTATGCTTACCTGATTGTAGTCTTTTTCTATACC
ATCACCGTGGTTCACGCGATATCAAGTAGAAAAGAAAGAAGGGCACTGAA
GTTAGtaCCTGTGCCAGAAGCGCCATTAGAAGAAAATGGAAAGAAGAGAT
TAACCATGTGGGGGGAGAAATGGTGTGGAACAGAGGCTCATGGGAAAAGT
TATGATCACGAAGAATCATATCAACATCTTACACAAGGTCTTTCTAAATG
TTGTGACAAACATGATGAATGTCCACTTGGAATGTCGCCGCATTCTCAAA
AATGGAACGTCATCAACACATCTGACTACAGTTTGGCTGAATGCCAGTGT
GATGACCTTTTCagagaatgtttgaaaaatGATGGGAGTTGGTCTGCAGA
AACTGTCGGAACTCTATTCTACAACGTTCTCTCAGTCCCTTGTATCACCG
TAGAAGAAGGTGCAAACTTAGATGAACCAGGGACCGGCATTGATGGAACA
GATCAGCTAGATTACGTCTCTGATATCGGGAACGGCCCTCCCGCCCATTC
ACAGGCAGGTGGCTACGGACCACCCGCCCATGGACCGCCTGCCTACTCTC
ATGCGGGTGGCTATGGACCACCTGCCCATTCACAAGCGGGCGGCAAAGGT
CCAAAACGTGGACTGCCTTCTGTACCTAAGCCTCTTAAAGATTGGATAAA
GAGCAAAAATAAAGACAGGCCAGGAGCAGTTATAGTCAAACctaaagaat
tttaaTTGGATTCTGATTTTGAACCATGCCCTGGGAATGAAATGTGGAAA
AAatattTTCAGCTCTTTTATGCTTACCTGATTGTAGTCTTTTTCTATAC
CATCACCGTGGTTCACGCGATATCAAGTAGAAAAGAAAGAAGGGCACTGA
AGTTAGtaCCTGTGCCAGAAGCGCCATTAGAAGAAAATGGAAAGAAGAGA
TTAACCATGTGGGGGGAGAAATGGTGTGGAACAGAGGCTCATGGGAAAAG
TTATGATCACGAAGAATCATATCAACATCTTACACAAGGTCTTTCTAAAT
GTTGTGACAAACATGATGAATGTCCACTTGGAATGTCGCCGCATTCTCAA
AAATGGAACGTCATCAACACATCTGACTACAGTTTGGCTGAATGCCAGTG
TGATGACCTTTTCagagaatgtttgaaaaatGATGGGAGTTGGTCTGCAG
AAACTGTCGGAACTCTATTCTACAACGTTCTCTCAGTCCCTTGTATCACC
GTAGAAGAAGGTGCAAACTTAGATGAACCAGGGACCGGCATTGATGGAAC
AGATCAGCTAGATTACGTCTCTGATATCGGGAACGGCCCTCCCGCCCATT
CACAGGCAGGTGGCTACGGACCACCCGCCCATGGACCGCCTGCCTACTCT
CATGCGGGTGGCTATGGACCACCTGCCCATTCACAAGCGGGCGGCAAAGG
TCCAAAACGTGGACTGCCTTCTGTACCTAAGCCTCTTAAAGATTGGATAA
AGAGCAAAAATAAAGACAGGCCAGGAGCAGTTATAGTCAAACctaaagaa
ttttaa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_005550	XLOC_005550	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00009899-protein	TCONS_00009899-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000100	supercontig	sc0000100:117496..132827 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0572222	0.0279003	0.0323949	0.0633868	0.0385836	0	0.835606	0.512562	0	0.492417	1.88207	1.25889	6.40742	2.09673	7.13834	19.2067	2.45943	3.01923	0.0304142	0.0705247	2.18934	0.742343	0	0	0	0	0	0	0	0.489836

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR016090	PLipase_A2_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004623	phospholipase A2 activity

Vocabulary: **Biological Process**
Term	Definition
GO:0050482	arachidonic acid secretion
GO:0006644	phospholipid metabolic process

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050482	arachidonic acid secretion
biological_process	GO:0006644	phospholipid metabolic process
molecular_function	GO:0004623	phospholipase A2 activity

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00009899 vs. Swiss-Prot (Human)

BLAST of TCONS_00009899 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00009899 (transcript) - C. hemisphaerica