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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009895 ID=TCONS_00009895|Name=TCONS_00009895|organism=Clytia hemisphaerica|type=transcript|length=1435bp TTCAAAAAACGTAAAGCACAATTGAAACAAATGCGTTCTCAGAATAAAAT ATCAGCACAATGGTACTTCAAATTACTTCCACAAAACACCGACGAAACTT ATTCTGATACTTTCGATAGTACTTTATTGGACTTCCTAATCATTAATTTC TGTCCCAATGTGGATCAACCTTTAACCGGATGGCAGAAACGGCCAAACAA CACCGACATTAAACGTGGAGCACATTGCAAAAGAATGAGTATTGGCAGAA ACATCGGTCAACATTCAACCATGTATATGGAGAATAAGTTCTACCAAGAA GCTTATCAATTTATCGTACCGTCACTGATCGCTTTAGGGGTACCACAACA GGAGATTAATGATCTTCTTTCACCATTAAGATATGGCTTCACCAAGGCCG TCGCTAGCTTTACCGGTAGAGAGGACATCTTGAAACAGATTGACCAACTA ATCAAACAAAACAACACCAAGGCTTACCATGTCGTCTTGCACGCAGCTGC TGGAACAGGAAAATCGGAAATCGTTAGACGATACGTAGAGGTTTACGGAA AACACTTTAACGAGAATGTGATATGGTTAAAAAGTGAAAGCCAGGATTCA CTTAATAAAGCGTTTATCAAACTTGCTGAACACTTCAATTTAGAAATCCG AGACCAGCATCAAAAGATAAAGAGTATGCCATCCATCATCGCCAGCGTTT ATGGTTACCTTGACGACATCGAacctttatttgtttttgatgatGCATGG GAAtttaacgtcatcaaaaattttcttccgcCATACAACAAATACACAGC TTTGATTACGTCACAAAAGAAAGACTTTCCTACtccagattttgagaaaa tcgcAGTGGAAAGTTTAACTGTAGTAGAATCAAAAACACTATTAACTGAA CAGTGTAGAGCTAATCTAACCAACCAACAAATCAAGGACATCGTGGACTT GATTCAGGGACATCCCCTCGGTCTTCAGCAGGTCATATCAGCTTTGAACA ATACAACAATGACCTCTGAAGAATTTATCGGATTGTTGAAATCGGAAACA GCCAACGTCCTCCAGAAACCAATATCGAAAACCCATCATGGCGTTTCAAC CATTGCTGCTATTGAGATCAATCTTAAACGTCTCTCAGAGCAGGATGAAG ACTCTAAACTGGCTATTGAGATTCTGAACCGAATGTGCTATTTGAGAAGT GAagaaatttcaatgaatgttGTCCGTATACTTGATGCTGGAGAATCATC CAAAATTGATCTTGATTCTGCCCTTCACCAGTTAGAAAGTGCATCGATTA TAAATAAACGAAACACTGACAATGGAATAATCGTGACCATCCATTCGTTG ATTCAAGCAACTGTCCTTACGTTGAGTAAAACTAATGAAATCGGTTATCT TATCAAGTGTTTAAAAgctttctttaaagaaattg Run BLAST on NCBI transcript from alignment at sc0000100:62347..63781+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009895 ID=TCONS_00009895|Name=TCONS_00009895|organism=Clytia hemisphaerica|type=transcript|length=1435bp|location=Sequence derived from alignment at sc0000100:62347..63781+ (Clytia hemisphaerica) TTCAAAAAACGTAAAGCACAATTGAAACAAATGCGTTCTCAGAATAAAAT
ATCAGCACAATGGTACTTCAAATTACTTCCACAAAACACCGACGAAACTT
ATTCTGATACTTTCGATAGTACTTTATTGGACTTCCTAATCATTAATTTC
TGTCCCAATGTGGATCAACCTTTAACCGGATGGCAGAAACGGCCAAACAA
CACCGACATTAAACGTGGAGCACATTGCAAAAGAATGAGTATTGGCAGAA
ACATCGGTCAACATTCAACCATGTATATGGAGAATAAGTTCTACCAAGAA
GCTTATCAATTTATCGTACCGTCACTGATCGCTTTAGGGGTACCACAACA
GGAGATTAATGATCTTCTTTCACCATTAAGATATGGCTTCACCAAGGCCG
TCGCTAGCTTTACCGGTAGAGAGGACATCTTGAAACAGATTGACCAACTA
ATCAAACAAAACAACACCAAGGCTTACCATGTCGTCTTGCACGCAGCTGC
TGGAACAGGAAAATCGGAAATCGTTAGACGATACGTAGAGGTTTACGGAA
AACACTTTAACGAGAATGTGATATGGTTAAAAAGTGAAAGCCAGGATTCA
CTTAATAAAGCGTTTATCAAACTTGCTGAACACTTCAATTTAGAAATCCG
AGACCAGCATCAAAAGATAAAGAGTATGCCATCCATCATCGCCAGCGTTT
ATGGTTACCTTGACGACATCGAacctttatttgtttttgatgatGCATGG
GAAtttaacgtcatcaaaaattttcttccgcCATACAACAAATACACAGC
TTTGATTACGTCACAAAAGAAAGACTTTCCTACtccagattttgagaaaa
tcgcAGTGGAAAGTTTAACTGTAGTAGAATCAAAAACACTATTAACTGAA
CAGTGTAGAGCTAATCTAACCAACCAACAAATCAAGGACATCGTGGACTT
GATTCAGGGACATCCCCTCGGTCTTCAGCAGGTCATATCAGCTTTGAACA
ATACAACAATGACCTCTGAAGAATTTATCGGATTGTTGAAATCGGAAACA
GCCAACGTCCTCCAGAAACCAATATCGAAAACCCATCATGGCGTTTCAAC
CATTGCTGCTATTGAGATCAATCTTAAACGTCTCTCAGAGCAGGATGAAG
ACTCTAAACTGGCTATTGAGATTCTGAACCGAATGTGCTATTTGAGAAGT
GAagaaatttcaatgaatgttGTCCGTATACTTGATGCTGGAGAATCATC
CAAAATTGATCTTGATTCTGCCCTTCACCAGTTAGAAAGTGCATCGATTA
TAAATAAACGAAACACTGACAATGGAATAATCGTGACCATCCATTCGTTG
ATTCAAGCAACTGTCCTTACGTTGAGTAAAACTAATGAAATCGGTTATCT
TATCAAGTGTTTAAAAgctttctttaaagaaattg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00009895-exon-sc0000100-1491911889:62347..63781 | TCONS_00009895-exon-sc0000100-1491911889:62347..63781 | Clytia hemisphaerica | exon |
TCONS_00009895-exon-sc0000100-1510915933:62347..63781 | TCONS_00009895-exon-sc0000100-1510915933:62347..63781 | Clytia hemisphaerica | exon |
TCONS_00009895-exon-sc0000100-1575043694:62347..63781 | TCONS_00009895-exon-sc0000100-1575043694:62347..63781 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000100 | supercontig | sc0000100:62347..63781 + |
Blast
The following BLAST results are available for this feature:
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