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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009873 ID=TCONS_00009873|Name=TCONS_00009873|organism=Clytia hemisphaerica|type=transcript|length=920bp
aaaagcttttaactattatcttttttcatttcaaaccatctaatacaaaa
tctttgtagaagtgttaaattttgcggcaaagaaatggaaagtaaatgtc
ggcaaatcccgatatcagcaaagaaatcgaaaatgctcatgtcggcatat
gccgacatcggcagttaaagggttaagttAGAAGTTTTTTGGATGATTCC
atgtaaaaaaatattacgTAATGAATATCGTGAATAGCTAATAAAACTAT
GTTCACTTGagccaacgatgtaaaaataaatatCGAGAGTTTATCGATAC
AAGCCTGGATGGGATGAATTATTCAGACTTTTCTTTGCCTTGAACCGCTT
GTAATATCGCAGAGTTTTGTGGTGCAGTGCCGATCTTCATTGAATTTAAA
CATATAAAACTTTTGGAGGACGCCATGTTGAATATATTAAAAAGTCCAGC
ATCGGAACACTGATGAGAATAAATATTTAATCACATGTTTACTAATTATG
CTTTTGCGTGTTGTTGTTATGATGGAgcttttaattattcaacatgacaa
tAACGTCGTCCTACAAAAGGTTTCTTAGTTTTACTCTAAGTAATATAAAG
CTCTAATAATTATCGAGCACTATATACCAGGAAAAAACTTTCGTTAACGA
ATTTCCGTCTTATATCTTAGATCTCCTTCTAAAAAGGTCTAATAAATTAC
AGCCCAcctgttttgattatttttcccACAATGGCAAATGTATCTATCGA
ATTGACGAGGTTTCTGAGTATCAATATTTTATAGTGCgcatatcatattt
ttttctactttaaaCTATTCTAACCTCAAATTATTTTGTCAAACTAGAAT
TTTTGTAACCTATTGTAACTAATTTAATCATTTGGAagtaatataacatt
ttctagaaATTTGAGATCCT Run BLAST on NCBI transcript from alignment at sc0000099:344901..345820 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009873 ID=TCONS_00009873|Name=TCONS_00009873|organism=Clytia hemisphaerica|type=transcript|length=920bp|location=Sequence derived from alignment at sc0000099:344901..345820 (Clytia hemisphaerica)
AGGATCTCAAATttctagaaaatgttatattactTCCAAATGATTAAATT
AGTTACAATAGGTTACAAAAATTCTAGTTTGACAAAATAATTTGAGGTTA
GAATAGtttaaagtagaaaaaaatatgatatgcGCACTATAAAATATTGA
TACTCAGAAACCTCGTCAATTCGATAGATACATTTGCCATTGTgggaaaa
ataatcaaaacaggTGGGCTGTAATTTATTAGACCTTTTTAGAAGGAGAT
CTAAGATATAAGACGGAAATTCGTTAACGAAAGTTTTTTCCTGGTATATA
GTGCTCGATAATTATTAGAGCTTTATATTACTTAGAGTAAAACTAAGAAA
CCTTTTGTAGGACGACGTTattgtcatgttgaataattaaaagcTCCATC
ATAACAACAACACGCAAAAGCATAATTAGTAAACATGTGATTAAATATTT
ATTCTCATCAGTGTTCCGATGCTGGACTTTTTAATATATTCAACATGGCG
TCCTCCAAAAGTTTTATATGTTTAAATTCAATGAAGATCGGCACTGCACC
ACAAAACTCTGCGATATTACAAGCGGTTCAAGGCAAAGAAAAGTCTGAAT
AATTCATCCCATCCAGGCTTGTATCGATAAACTCTCGatatttattttta
catcgttggctCAAGTGAACATAGTTTTATTAGCTATTCACGATATTCAT
TAcgtaatatttttttacatGGAATCATCCAAAAAACTTCTaacttaacc
ctttaactgccgatgtcggcatatgccgacatgagcattttcgatttctt
tgctgatatcgggatttgccgacatttactttccatttctttgccgcaaa
atttaacacttctacaaagattttgtattagatggtttgaaatgaaaaaa
gataatagttaaaagctttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009873-exon-sc0000099-1491911889:344901..345820 | TCONS_00009873-exon-sc0000099-1491911889:344901..345820 | Clytia hemisphaerica | exon |
| TCONS_00009873-exon-sc0000099-1510915933:344901..345820 | TCONS_00009873-exon-sc0000099-1510915933:344901..345820 | Clytia hemisphaerica | exon |
| TCONS_00009873-exon-sc0000099-1575043694:344901..345820 | TCONS_00009873-exon-sc0000099-1575043694:344901..345820 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099 | supercontig | sc0000099:344901..345820 . |
Blast
The following BLAST results are available for this feature:
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