TCONS_00009870 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009870
Unique NameTCONS_00009870
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length182

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009870 ID=TCONS_00009870|Name=TCONS_00009870|organism=Clytia hemisphaerica|type=transcript|length=182bp
AAAAAAGACATTGAATTTGGTATCATGTTGAATTGGTTGAGAACTAAGCT
CTCATATTGCTTGCTACGATCAGCTATCCTATGCTTACGTGGATCGAGAG
CTGTTAGGAAATTGAACATTGATATGAATGAGATTGAAATTCATGAATCT
ACTAGgagaaatttttagtcaatCTCTCTTAT
Run BLAST on NCBI

transcript from alignment at sc0000099:199167..199348

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009870 ID=TCONS_00009870|Name=TCONS_00009870|organism=Clytia hemisphaerica|type=transcript|length=182bp|location=Sequence derived from alignment at sc0000099:199167..199348 (Clytia hemisphaerica)
ATAAGAGAGattgactaaaaatttctcCTAGTAGATTCATGAATTTCAAT
CTCATTCATATCAATGTTCAATTTCCTAACAGCTCTCGATCCACGTAAGC
ATAGGATAGCTGATCGTAGCAAGCAATATGAGAGCTTAGTTCTCAACCAA
TTCAACATGATACCAAATTCAATGTCTTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005524XLOC_005524Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009870-exon-sc0000099-1491911889:199167..199348TCONS_00009870-exon-sc0000099-1491911889:199167..199348Clytia hemisphaericaexon
TCONS_00009870-exon-sc0000099-1510915933:199167..199348TCONS_00009870-exon-sc0000099-1510915933:199167..199348Clytia hemisphaericaexon
TCONS_00009870-exon-sc0000099-1575043694:199167..199348TCONS_00009870-exon-sc0000099-1575043694:199167..199348Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000099supercontigsc0000099:199167..199348 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009870 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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