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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009839 ID=TCONS_00009839|Name=TCONS_00009839|organism=Clytia hemisphaerica|type=transcript|length=3351bp
GGAAATAGAAACCTGAAAACGTCAAAACATGTACCAACacacttttaaaa
tattttcttatttttttcaaagggaAAAAGTGTTCCTTCATGAACCTtgt
tttttttccctttttagtTAACAAAAAAACATCATGGAAGTAATAAAAAT
ACATTTCTAATGCTCAAAAACCATTGTTTTCCAAAGAGAAAGACCAAATC
GTCAAGATCTAAGCAAGAAAGCACAAGCACTGACACTATGACTTCAAACT
TTAGTTCGTTCAAGAAATTAANCAAGAAAGCACAAGCACTGGCACTATGA
CTTCAAACTTTAGTTCGTTCAAGAAATTAACAAGTCGTGCTTTCTCTTAT
CTTCTTGATGCACAGCAACAGCACCCTAGCATTGTAGCTTACACACGGTA
CTCACTACCACGTAAATACACTTATGCAAGACCAAATTTCCTGGAATTGG
ATGAAGAAGCAACAATAGCTTCAAGCGATCATGAGATCAGACCAGTTATT
CTACCTAAAAGACCACTCATTATGAATGCAGGATATGCTGAGGTCATCAA
TGCAGGCAAAACACCACAGACAAATGAGGATCAAGctactttttgttctt
ttgtcatcaCAGTACCACAAAATATGCGAGAGGAAGGATGGACTAAAGAG
CAGTGTCAATTACCATGTGTTTATTTTGCAGTCTTTGATGGACATGCtgG
TTACGATGCAGCTTTGTTTGCTCAAAACAGGTTACATTTCCATGTCAAAG
AGAGATTAACGCAAATCGCCAACATGTTAGTAATGCCACAAGATGAAATT
GAGCGAAAATATTTTACTATGGGCCTTATTATGGATATTGATGCTGATAA
ATTGATTATTGGTGCTCTGGAGGAAGCTTTTCATACGTTTGATGATGAAT
TGAGACAAGAGAGATTTGACTTTCATGTTCAAGGTGGTTGTACCGTGGTA
GTATGCGTAATTATCAAAGGTAAACTGTACGTGGCTGGTGCTGGAGACAG
TCGTGCTGTTCTTTATCGCGATAATAATCCAGTTGCAATGTCACGTGACC
ACACTCCCGAATCGGAACGGAAACGGATTCAAACGGTGACTTGTTATAAT
CCCGATTTGGTTCGTGGTGAATACACACCTTTACAATTTCAACACAGATG
TCGGAAAAAGGATCTCGGAACTCGCCAATTGTACCGGAACCACTTGATGG
ATGGGTGGTCGTTCAAAGTGGTGGATAAAAATGATCTCAAGCCTCAGGTT
ATTTGTGGTGAAGGAAAACGCGCCCGTTTGTTGGATACCATTGGGACAAC
GCGCGGTTTCGGTGATCATGATTTGGAGGTACCGTATATGGATGGGTTGA
AAATTAAACCGTTCATGTTGTCTTCACCAGAAGTATTTGTGTATGATTTA
GAAAACGAGACTTTTAGTGACGAAGATGTCTTAGTGATGGCTACTGATGG
ATTATGGGAACGCTTAACAAATGAAAACGTCGGGGAACTTGTTAACACAA
CTTTGAAGAAACATTCATTAGAGGAGAATCGGAAATACCTAGTTGCCGCC
CAAGCACTTGTTGACGAATCGAGGGGCGTTTTGAGTGAACGCGGGTGGCG
AACGATTGATAACGCGCCTGCTACGTACGATGATGTTTCTGTTTTTGTGA
TCCCCTTAAAAGAATGGAAACGGACTTTAGATTTGGTTGTTCGGAGTACA
CGGCCCGGTAGTTCCGTTATCCTCGCGGGTGAAGAATATTGTAATATCCC
GCACAACCCTTTATCGGTGATCGGGGATAGACTCACGGAAGCGGAACTCG
ATGACGTCACGAAAGGTTATGATGACGTAAGTAAAACTGTTGAAGTGAGA
GGTCTGGAAAATCAAAGGAAAAGAGCCAATGAGAGCCTAGATGAGGGACC
TCAAGAAAAGGCAATGCAAaactaaaatatattttttacatCATTTGAGA
AGTTTAACAGAAAggagtaaatttttttatttttttattttgacaccaca
caaagattttttattttggggTTTTGGATAGTTCATTGTTCAGTCGAATT
ATTATtgtaataatttgaaaatattgatatttccCAACTTTTTGGTTCCA
ATTTTTTATTGCATGTTTGGGTTTTGTTGAACTTCATCGTCGGTCATTGT
ATATAGAATTGTCAATAGTTTTTCTTGAATCAGCCCACCTTTCTATAGGA
ACATCCCTCCCTGTGCCACAGACCCGCTGAGACTCAagccccactagaaa
atttgGCCAGAGTTCCGTCCCCGGTGGGAGAAATACCCTCcattttcagc
cccactggagtcaattgactttgatttcatccccatttatAATTATATAG
AAAAAATTGTACTCTAAAATTATCCCCAATGTAATTTTTTACCAGAGAAC
AATAGGTTTTCGAAAGACATTTTCATCCCTATGAgggaagaagttccacc
ggggctgtgagacaggggtgtatatgaAAATTTTCGCCTGAGACTTTGGC
CATGGAAGGTTGGATAGGGgtttattatttttatacatCTTAGTCTCgag
caaaaattttataaaaaacctAATTTATTCTATTAATTGATAATTCTATT
TTGATTTATATAATTAGATAAGTGATTTATTGACAAGCAATATTTAgtat
gaaaaagattttcataagATAACACCCTACCCTAGATTAGAATGCTAGGT
TTGGGAAGATGTCAATAAAGCGataccaatttaatttgttgttttacggg
ccaagctacccaaaaaagagggtcggtcggtcggtgaaaaaatgaaaata
aaagttgaatttcacctataaaatctcctaaaaaggcagcaaaaactatt
acatttttacaaaaatgcgaaatagaaaataaacagacacaaaaagctcg
aattcatggataaaatgaaaaattcaacataaaactctcaaaaccttgga
aaaactaccaaaatcttgaaaatttggcagtctgcaatgaaaatacaaat
gtactaccaaaatcaattttatttctatttctatttcgttacccgtaaaa
caactaatcaaattggtctcgcctaagtgAATGAATTGGGAATACGACTT
CTTTTTTTGACGGAAACAAatgaaaagttatttattttaaaagttgtttt
caTTCAGTTGAAATCTTTTTCACATTACTAAAGTTAAGTAATCACGATTT
CAATATCTTACTTACCTGAAAAGTAGCTTATTCTTAGTAGATTTTGCAAG
TCGTATCAATATTTCGAAGAAAATAATACTATATTGTTGTAATCAAGTAG
TAGcaattgattttattaaaaagaaaattctaaTCATTTCGCTCATTATC
A Run BLAST on NCBI protein sequence of TCONS_00009839-protein >TCONS_00009839-protein ID=TCONS_00009839-protein|Name=TCONS_00009839-protein|organism=Clytia hemisphaerica|type=polypeptide|length=542bp
MTSNFSSFKKLTSRAFSYLLDAQQQHPSIVAYTRYSLPRKYTYARPNFLE
LDEEATIASSDHEIRPVILPKRPLIMNAGYAEVINAGKTPQTNEDQATFC
SFVITVPQNMREEGWTKEQCQLPCVYFAVFDGHAGYDAALFAQNRLHFHV
KERLTQIANMLVMPQDEIERKYFTMGLIMDIDADKLIIGALEEAFHTFDD
ELRQERFDFHVQGGCTVVVCVIIKGKLYVAGAGDSRAVLYRDNNPVAMSR
DHTPESERKRIQTVTCYNPDLVRGEYTPLQFQHRCRKKDLGTRQLYRNHL
MDGWSFKVVDKNDLKPQVICGEGKRARLLDTIGTTRGFGDHDLEVPYMDG
LKIKPFMLSSPEVFVYDLENETFSDEDVLVMATDGLWERLTNENVGELVN
TTLKKHSLEENRKYLVAAQALVDESRGVLSERGWRTIDNAPATYDDVSVF
VIPLKEWKRTLDLVVRSTRPGSSVILAGEEYCNIPHNPLSVIGDRLTEAE
LDDVTKGYDDVSKTVEVRGLENQRKRANESLDEGPQEKAMQN Run BLAST on NCBI transcript from alignment at sc0000099:65262..70256- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009839 ID=TCONS_00009839|Name=TCONS_00009839|organism=Clytia hemisphaerica|type=transcript|length=4995bp|location=Sequence derived from alignment at sc0000099:65262..70256- (Clytia hemisphaerica)
GGAAATAGAAACCTGAAAACGTCAAAACATGTACCAACACACTTTTAAAA
TATTTTCTTATTTTTTTCAAAGGGAAAAAGTGTTCCTTCATGAACCTTGT
TTTTTTTCCCTTTTTAGTTAACAAAAAAACATCATGGAAGTAATAAAAAT
ACATTTCTAATGCTCAAAAACCATTGTTTTCCAAAGAGAAAGACCAAATC
GTCAAGATCTAAGCAAGAAAGCACAAGCACTGACACTATGACTTCAAACT
TTAGTTCGTTCAAGAAATTAANCAAGAAAGCACAAGCACTGGCACTATGA
CTTCAAACTTTAGTTCGTTCAAGAAATTAACAAGTCGTGCTTTCTCTTAT
CTTCTTGATGCACAGCAACAGCACCCTAGCATTGTAGCTTACACACGGTA
CTCACTACCACGTAAATACACTTATGCAAGACCAAATTTCCTGGAATTGG
ATGAAGAAGCAACAATAGCTTCAAGCGATCATGAGATCAGACCAGTTATT
CTACCTAAAAGACCACTCATTATGAATGCAGGATATGCTGAGGTCATCAA
TGCAGGCAAAACACCACAGACAAATGAGGATCAAGCTACTTTTTGTTCTT
TTGTCATCACAGTACCACAAAATATGCGAGAGGAAGGATGGACTAAAGAG
CAGTGTCAATTACCATGTGTTTATTTTGCAGTCTTTGATGGACATGCTGG
TAAAAATATTTATTTACTGTTTTTTTGCTTGTATCACTCTCTCTACTGAT
TTTATATACTAATTGATTCAAACTTTCCCCTATGGAAGCAAGATGATTCT
TATTAAAGTGGGTGGATTAATATACTTGGAAAGGATCGAAGGAAAAAAAT
GAACAGTAAAGACATTTTAAAAAGATTTAGTTTTTACTTTACTTGAATTT
TGTCTTCCGAAACTGATTGTAAAGTAGATGATCCCAACGCAAAATAGACT
TAATTTTGATCATTTTTACTACTATTGCTCGAAAATCTGAGGATATATCG
AATTTGTTCTCCTTTATATATTACTTCACTTAGGTTACGATGCAGCTTTG
TTTGCTCAAAACAGGTTACATTTCCATGTCAAAGAGAGATTAACGCAAAT
CGCCAACATGTTAGTAATGCCACAAGATGAAATTGAGCGAAAATATTTTA
CTATGGGCCTTATTATGGATATTGATGCTGATAAATTGATTATTGGTGCT
CTGGAGGAAGCTTTTCATACGTTTGATGATGAATTGAGACAAGAGAGATT
TGACTTTCATGTTCAAGGTGGTTGTACCGTGGTAGTATGCGTAATTATCA
AAGGTAAGCACCTTAACCCTTCATACCCAAGGGATGTATATACTCGTTCA
AAATTAGTCAATATCTTAAGTCCCAGACCTAAAGCTATAACTCCTAACCA
CTTTATTTTAAAAGGCATAAACAGAATACTTTTTGACAGTGTATAAAAAT
ACCTTTCTAATAGTACCAAAACAGTTAACTAACTCTTAAGTTACAAGCTT
TTATGCCAGTTTGAAGTTTTCGATTTCAAAGGTAATGTTGAAATTTTCAC
ATTTTTCAAAAATGTTTCGCGCTGGAAAGATTGGGGCAGATTTACATTAT
TGTTTTTTGGCTTCCTTCAACTGCCAAATTAAATTTCCTCAGCAAAAATT
TTTTCGGCCATCCGCCAAACCCACCAAATTGAATTCCCACCAAGATTTCT
TCTCTCAAGGTACACAATTTTATTAGCAAACAGGTTGCTAAGGCTCGAGG
GCCCGGATTTGCCCACTTTTTTCCCTATCCTGTAAAGTAAAAGCTTTTTA
GATAATCTAACCATGGTAAACGACAGATAACCCTTGGCCCAAAAAGCATA
AATATGGTTTACAGTAATATCAGAGGAATATTTTCGGAAGATGAGCAAGA
ATGATAGGCAGCCCCATGGCTAACCTGAAGATTGGAGTTGCTTATAAAAA
GGAAATTGTATAGTTTATTAAGTAATTTTAAATTTTATTTTTTTTAGTTC
TCAAAAAAAAACTTTATGAGCATAACATTTTACAAGAAAAAGAATTTGCT
TAGTCAAAGGTTTTACAAAAAAGAATTTCTCAAGTTTAAAAAGAAAATTT
TTGAGAATTGCTGATTCTTCTTTCTTAAGTTATTTTTATTACCGAATGAT
CTTTCAAAATTCCAAAAAAATTATAAGTATATAATTCNAAAATTTTTGAG
AATTGCTGATTCTTTTTTCTTAAGTTATTTTTATTACCGAATGATCTTTC
AAAATTCAAAAAAAATTATAAGTATATAATTCCGTGTGACGTCATTTTCA
CCCACGATTAGCCATTTTTTCTAAGAAATAGTGCAAAGAATATGTACAGG
ATGATTTCGTGACACCTTCATAACTCAAAATCTTCAAATAGTTCCCATTT
AGACCTGCGCATAGTTTTTTGTTTCGTGGGTGAAATTTTTGTCAGTTAGG
AACAGGCAACTTGCTTGAGGTTTGCTTGAAGATAGTCCCTAACTGGATTT
TGTCGAATCGGTTCCATCTTCCTTGGTTTTGGGTTTCTTTTAGGTTATTC
CTATCATGCGAACCCTTTGTTGTTGCAAATTTACTGTTTATCTTAATGAT
ACTTTTAATATAGGTAAACTGTACGTGGCTGGTGCTGGAGACAGTCGTGC
TGTTCTTTATCGCGATAATAATCCAGTTGCAATGTCACGTGACCACACTC
CCGAATCGGAACGGAAACGGATTCAAACGGTGACTTGTTATAATCCCGAT
TTGGTTCGTGGTGAATACACACCTTTACAATTTCAACACAGATGTCGGAA
AAAGGATCTCGGAACTCGCCAATTGTACCGGAACCACTTGATGGATGGGT
GGTCGTTCAAAGTGGTGGATAAAAATGATCTCAAGCCTCAGGTTATTTGT
GGTGAAGGAAAACGCGCCCGTTTGTTGGATACCATTGGGACAACGCGCGG
TTTCGGTGATCATGATTTGGAGGTACCGTATATGGATGGGTTGAAAATTA
AACCGTTCATGTTGTCTTCACCAGAAGTATTTGTGTATGATTTAGAAAAC
GAGACTTTTAGTGACGAAGATGTCTTAGTGATGGCTACTGATGGATTATG
GGAACGCTTAACAAATGAAAACGTCGGGGAACTTGTTAACACAACTTTGA
AGAAACATTCATTAGAGGAGAATCGGAAATACCTAGTTGCCGCCCAAGCA
CTTGTTGACGAATCGAGGGGCGTTTTGAGTGAACGCGGGTGGCGAACGAT
TGATAACGCGCCTGCTACGTACGATGATGTTTCTGTTTTTGTGATCCCCT
TAAAAGAATGGAAACGGACTTTAGATTTGGTTGTTCGGAGTACACGGCCC
GGTAGTTCCGTTATCCTCGCGGGTGAAGAATATTGTAATATCCCGCACAA
CCCTTTATCGGTGATCGGGGATAGACTCACGGAAGCGGAACTCGATGACG
TCACGAAAGGTTATGATGACGTAAGTAAAACTGTTGAAGTGAGAGGTCTG
GAAAATCAAAGGAAAAGAGCCAATGAGAGCCTAGATGAGGGACCTCAAGA
AAAGGCAATGCAAAACTAAAATATATTTTTTACATCATTTGAGAAGTTTA
ACAGAAAGGAGTAAATTTTTTTATTTTTTTATTTTGACACCACACAAAGA
TTTTTTATTTTGGGGTTTTGGATAGTTCATTGTTCAGTCGAATTATTATT
GTAATAATTTGAAAATATTGATATTTCCCAACTTTTTGGTTCCAATTTTT
TATTGCATGTTTGGGTTTTGTTGAACTTCATCGTCGGTCATTGTATATAG
AATTGTCAATAGTTTTTCTTGAATCAGCCCACCTTTCTATAGGAACATCC
CTCCCTGTGCCACAGACCCGCTGAGACTCAAGCCCCACTAGAAAATTTGG
CCAGAGTTCCGTCCCCGGTGGGAGAAATACCCTCCATTTTCAGCCCCACT
GGAGTCAATTGACTTTGATTTCATCCCCATTTATAATTATATAGAAAAAA
TTGTACTCTAAAATTATCCCCAATGTAATTTTTTACCAGAGAACAATAGG
TTTTCGAAAGACATTTTCATCCCTATGAGGGAAGAAGTTCCACCGGGGCT
GTGAGACAGGGGTGTATATGAAAATTTTCGCCTGAGACTTTGGCCATGGA
AGGTTGGATAGGGGTTTATTATTTTTATACATCTTAGTCTCGAGCAAAAA
TTTTATAAAAAACCTAATTTATTCTATTAATTGATAATTCTATTTTGATT
TATATAATTAGATAAGTGATTTATTGACAAGCAATATTTAGTATGAAAAA
GATTTTCATAAGATAACACCCTACCCTAGATTAGAATGCTAGGTTTGGGA
AGATGTCAATAAAGCGATACCAATTTAATTTGTTGTTTTACGGGCCAAGC
TACCCAAAAAAGAGGGTCGGTCGGTCGGTGAAAAAATGAAAATAAAAGTT
GAATTTCACCTATAAAATCTCCTAAAAAGGCAGCAAAAACTATTACATTT
TTACAAAAATGCGAAATAGAAAATAAACAGACACAAAAAGCTCGAATTCA
TGGATAAAATGAAAAATTCAACATAAAACTCTCAAAACCTTGGAAAAACT
ACCAAAATCTTGAAAATTTGGCAGTCTGCAATGAAAATACAAATGTACTA
CCAAAATCAATTTTATTTCTATTTCTATTTCGTTACCCGTAAAACAACTA
ATCAAATTGGTCTCGCCTAAGTGAATGAATTGGGAATACGACTTCTTTTT
TTGACGGAAACAAATGAAAAGTTATTTATTTTAAAAGTTGTTTTCATTCA
GTTGAAATCTTTTTCACATTACTAAAGTTAAGTAATCACGATTTCAATAT
CTTACTTACCTGAAAAGTAGCTTATTCTTAGTAGATTTTGCAAGTCGTAT
CAATATTTCGAAGAAAATAATACTATATTGTTGTAATCAAGTAGTAGCAA
TTGATTTTATTAAAAAGAAAATTCTAATCATTTCGCTCATTATCA Coding sequence (CDS) from alignment at sc0000099:65262..70256- >TCONS_00009839 ID=TCONS_00009839|Name=TCONS_00009839|organism=Clytia hemisphaerica|type=CDS|length=4887bp|location=Sequence derived from alignment at sc0000099:65262..70256- (Clytia hemisphaerica)
GTAAACTGTACGTGGCTGGTGCTGGAGACAGTCGTGCTGTTCTTTATCGC
GATAATAATCCAGTTGCAATGTCACGTGACCACACTCCCGAATCGGAACG
GAAACGGATTCAAACGGTGACTTGTTATAATCCCGATTTGGTTCGTGGTG
AATACACACCTTTACAATTTCAACACAGATGTCGGAAAAAGGATCTCGGA
ACTCGCCAATTGTACCGGAACCACTTGATGGATGGGTGGTCGTTCAAAGT
GGTGGATAAAAATGATCTCAAGCCTCAGGTTATTTGTGGTGAAGGAAAAC
GCGCCCGTTTGTTGGATACCATTGGGACAACGCGCGGTTTCGGTGATCAT
GATTTGGAGGTACCGTATATGGATGGGTTGAAAATTAAACCGTTCATGTT
GTCTTCACCAGAAGTATTTGTGTATGATTTAGAAAACGAGACTTTTAGTG
ACGAAGATGTCTTAGTGATGGCTACTGATGGATTATGGGAACGCTTAACA
AATGAAAACGTCGGGGAACTTGTTAACACAACTTTGAAGAAACATTCATT
AGAGGAGAATCGGAAATACCTAGTTGCCGCCCAAGCACTTGTTGACGAAT
CGAGGGGCGTTTTGAGTGAACGCGGGTGGCGAACGATTGATAACGCGCCT
GCTACGTACGATGATGTTTCTGTTTTTGTGATCCCCTTAAAAGAATGGAA
ACGGACTTTAGATTTGGTTGTTCGGAGTACACGGCCCGGTAGTTCCGTTA
TCCTCGCGGGTGAAGAATATTGTAATATCCCGCACAACCCTTTATCGGTG
ATCGGGGATAGACTCACGGAAGCGGAACTCGATGACGTCACGAAAGGTTA
TGATGACGTAAGTAAAACTGTTGAAGTGAGAGGTCTGGAAAATCAAAGGA
AAAGAGCCAATGAGAGCCTAGATGAGGGACCTCAAGAAAAGGCAATGCAA
AACTAAGTTACGATGCAGCTTTGTTTGCTCAAAACAGGTTACATTTCCAT
GTCAAAGAGAGATTAACGCAAATCGCCAACATGTTAGTAATGCCACAAGA
TGAAATTGAGCGAAAATATTTTACTATGGGCCTTATTATGGATATTGATG
CTGATAAATTGATTATTGGTGCTCTGGAGGAAGCTTTTCATACGTTTGAT
GATGAATTGAGACAAGAGAGATTTGACTTTCATGTTCAAGGTGGTTGTAC
CGTGGTAGTATGCGTAATTATCAAAGATGACTTCAAACTTTAGTTCGTTC
AAGAAATTAACAAGTCGTGCTTTCTCTTATCTTCTTGATGCACAGCAACA
GCACCCTAGCATTGTAGCTTACACACGGTACTCACTACCACGTAAATACA
CTTATGCAAGACCAAATTTCCTGGAATTGGATGAAGAAGCAACAATAGCT
TCAAGCGATCATGAGATCAGACCAGTTATTCTACCTAAAAGACCACTCAT
TATGAATGCAGGATATGCTGAGGTCATCAATGCAGGCAAAACACCACAGA
CAAATGAGGATCAAGCTACTTTTTGTTCTTTTGTCATCACAGTACCACAA
AATATGCGAGAGGAAGGATGGACTAAAGAGCAGTGTCAATTACCATGTGT
TTATTTTGCAGTCTTTGATGGACATGCTGGTAAACTGTACGTGGCTGGTG
CTGGAGACAGTCGTGCTGTTCTTTATCGCGATAATAATCCAGTTGCAATG
TCACGTGACCACACTCCCGAATCGGAACGGAAACGGATTCAAACGGTGAC
TTGTTATAATCCCGATTTGGTTCGTGGTGAATACACACCTTTACAATTTC
AACACAGATGTCGGAAAAAGGATCTCGGAACTCGCCAATTGTACCGGAAC
CACTTGATGGATGGGTGGTCGTTCAAAGTGGTGGATAAAAATGATCTCAA
GCCTCAGGTTATTTGTGGTGAAGGAAAACGCGCCCGTTTGTTGGATACCA
TTGGGACAACGCGCGGTTTCGGTGATCATGATTTGGAGGTACCGTATATG
GATGGGTTGAAAATTAAACCGTTCATGTTGTCTTCACCAGAAGTATTTGT
GTATGATTTAGAAAACGAGACTTTTAGTGACGAAGATGTCTTAGTGATGG
CTACTGATGGATTATGGGAACGCTTAACAAATGAAAACGTCGGGGAACTT
GTTAACACAACTTTGAAGAAACATTCATTAGAGGAGAATCGGAAATACCT
AGTTGCCGCCCAAGCACTTGTTGACGAATCGAGGGGCGTTTTGAGTGAAC
GCGGGTGGCGAACGATTGATAACGCGCCTGCTACGTACGATGATGTTTCT
GTTTTTGTGATCCCCTTAAAAGAATGGAAACGGACTTTAGATTTGGTTGT
TCGGAGTACACGGCCCGGTAGTTCCGTTATCCTCGCGGGTGAAGAATATT
GTAATATCCCGCACAACCCTTTATCGGTGATCGGGGATAGACTCACGGAA
GCGGAACTCGATGACGTCACGAAAGGTTATGATGACGTAAGTAAAACTGT
TGAAGTGAGAGGTCTGGAAAATCAAAGGAAAAGAGCCAATGAGAGCCTAG
ATGAGGGACCTCAAGAAAAGGCAATGCAAAACTAAGTTACGATGCAGCTT
TGTTTGCTCAAAACAGGTTACATTTCCATGTCAAAGAGAGATTAACGCAA
ATCGCCAACATGTTAGTAATGCCACAAGATGAAATTGAGCGAAAATATTT
TACTATGGGCCTTATTATGGATATTGATGCTGATAAATTGATTATTGGTG
CTCTGGAGGAAGCTTTTCATACGTTTGATGATGAATTGAGACAAGAGAGA
TTTGACTTTCATGTTCAAGGTGGTTGTACCGTGGTAGTATGCGTAATTAT
CAAAGATGACTTCAAACTTTAGTTCGTTCAAGAAATTAACAAGTCGTGCT
TTCTCTTATCTTCTTGATGCACAGCAACAGCACCCTAGCATTGTAGCTTA
CACACGGTACTCACTACCACGTAAATACACTTATGCAAGACCAAATTTCC
TGGAATTGGATGAAGAAGCAACAATAGCTTCAAGCGATCATGAGATCAGA
CCAGTTATTCTACCTAAAAGACCACTCATTATGAATGCAGGATATGCTGA
GGTCATCAATGCAGGCAAAACACCACAGACAAATGAGGATCAAGCTACTT
TTTGTTCTTTTGTCATCACAGTACCACAAAATATGCGAGAGGAAGGATGG
ACTAAAGAGCAGTGTCAATTACCATGTGTTTATTTTGCAGTCTTTGATGG
ACATGCTGGTAAACTGTACGTGGCTGGTGCTGGAGACAGTCGTGCTGTTC
TTTATCGCGATAATAATCCAGTTGCAATGTCACGTGACCACACTCCCGAA
TCGGAACGGAAACGGATTCAAACGGTGACTTGTTATAATCCCGATTTGGT
TCGTGGTGAATACACACCTTTACAATTTCAACACAGATGTCGGAAAAAGG
ATCTCGGAACTCGCCAATTGTACCGGAACCACTTGATGGATGGGTGGTCG
TTCAAAGTGGTGGATAAAAATGATCTCAAGCCTCAGGTTATTTGTGGTGA
AGGAAAACGCGCCCGTTTGTTGGATACCATTGGGACAACGCGCGGTTTCG
GTGATCATGATTTGGAGGTACCGTATATGGATGGGTTGAAAATTAAACCG
TTCATGTTGTCTTCACCAGAAGTATTTGTGTATGATTTAGAAAACGAGAC
TTTTAGTGACGAAGATGTCTTAGTGATGGCTACTGATGGATTATGGGAAC
GCTTAACAAATGAAAACGTCGGGGAACTTGTTAACACAACTTTGAAGAAA
CATTCATTAGAGGAGAATCGGAAATACCTAGTTGCCGCCCAAGCACTTGT
TGACGAATCGAGGGGCGTTTTGAGTGAACGCGGGTGGCGAACGATTGATA
ACGCGCCTGCTACGTACGATGATGTTTCTGTTTTTGTGATCCCCTTAAAA
GAATGGAAACGGACTTTAGATTTGGTTGTTCGGAGTACACGGCCCGGTAG
TTCCGTTATCCTCGCGGGTGAAGAATATTGTAATATCCCGCACAACCCTT
TATCGGTGATCGGGGATAGACTCACGGAAGCGGAACTCGATGACGTCACG
AAAGGTTATGATGACGTAAGTAAAACTGTTGAAGTGAGAGGTCTGGAAAA
TCAAAGGAAAAGAGCCAATGAGAGCCTAGATGAGGGACCTCAAGAAAAGG
CAATGCAAAACTAAGTTACGATGCAGCTTTGTTTGCTCAAAACAGGTTAC
ATTTCCATGTCAAAGAGAGATTAACGCAAATCGCCAACATGTTAGTAATG
CCACAAGATGAAATTGAGCGAAAATATTTTACTATGGGCCTTATTATGGA
TATTGATGCTGATAAATTGATTATTGGTGCTCTGGAGGAAGCTTTTCATA
CGTTTGATGATGAATTGAGACAAGAGAGATTTGACTTTCATGTTCAAGGT
GGTTGTACCGTGGTAGTATGCGTAATTATCAAAGATGACTTCAAACTTTA
GTTCGTTCAAGAAATTAACAAGTCGTGCTTTCTCTTATCTTCTTGATGCA
CAGCAACAGCACCCTAGCATTGTAGCTTACACACGGTACTCACTACCACG
TAAATACACTTATGCAAGACCAAATTTCCTGGAATTGGATGAAGAAGCAA
CAATAGCTTCAAGCGATCATGAGATCAGACCAGTTATTCTACCTAAAAGA
CCACTCATTATGAATGCAGGATATGCTGAGGTCATCAATGCAGGCAAAAC
ACCACAGACAAATGAGGATCAAGCTACTTTTTGTTCTTTTGTCATCACAG
TACCACAAAATATGCGAGAGGAAGGATGGACTAAAGAGCAGTGTCAATTA
CCATGTGTTTATTTTGCAGTCTTTGATGGACATGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009839-exon-sc0000099-1575043694:69558..70256 | TCONS_00009839-exon-sc0000099-1575043694:69558..70256 | Clytia hemisphaerica | exon |
| TCONS_00009839-exon-sc0000099-1575043694:68954..69223 | TCONS_00009839-exon-sc0000099-1575043694:68954..69223 | Clytia hemisphaerica | exon |
| TCONS_00009839-exon-sc0000099-1575043694:65262..67643 | TCONS_00009839-exon-sc0000099-1575043694:65262..67643 | Clytia hemisphaerica | exon |
| TCONS_00009839-exon-sc0000099-1510915933:69558..70256 | TCONS_00009839-exon-sc0000099-1510915933:69558..70256 | Clytia hemisphaerica | exon |
| TCONS_00009839-exon-sc0000099-1510915933:68954..69223 | TCONS_00009839-exon-sc0000099-1510915933:68954..69223 | Clytia hemisphaerica | exon |
| TCONS_00009839-exon-sc0000099-1510915933:65262..67643 | TCONS_00009839-exon-sc0000099-1510915933:65262..67643 | Clytia hemisphaerica | exon |
| TCONS_00009839-exon-sc0000099-1491911889:69558..70256 | TCONS_00009839-exon-sc0000099-1491911889:69558..70256 | Clytia hemisphaerica | exon |
| TCONS_00009839-exon-sc0000099-1491911889:68954..69223 | TCONS_00009839-exon-sc0000099-1491911889:68954..69223 | Clytia hemisphaerica | exon |
| TCONS_00009839-exon-sc0000099-1491911889:65262..67643 | TCONS_00009839-exon-sc0000099-1491911889:65262..67643 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099 | supercontig | sc0000099:65262..70256 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0043169 | cation binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003824 |
catalytic activity |
| molecular_function |
GO:0043169 |
cation binding |
Blast
BLAST of TCONS_00009839 vs. Swiss-Prot (Human)
Match: PPM1H (Protein phosphatase 1H OS=Homo sapiens GN=PPM1H PE=1 SV=2) HSP 1 Score: 318.546 bits (815), Expect = 4.921e-96 Identity = 186/480 (38.75%), Postives = 273/480 (56.88%), Query Frame = 3
Query: 405 LPRKYTYARPNFLELDEEATIASSDHEIRPVILPK--RPLIMNAGYAEVINAGKTPQTNEDQATFCSFVITVPQ------NMREEGWTKEQCQLP-----------------CVYFAVFDGHAGYDAALFAQNRLHFHVKERLTQIANML----VMPQ----DEIER-----------------------------KYFTMGLIMDIDADKLIIGALEEAFHTFDDELRQERFDFHVQGGCTVVVCVIIKGKLYVAGAGDSRAVLYRDNNPVAMSRDHTPESERKRIQTVTCYNPDLVRGEYTPLQFQHRCRKKDLGTRQLYRNHLMDGWSFKVVDKNDLKPQVICGEGKRARLLDTIGTTRGFGDHDLEVPYMDGLKIKPFMLSSPEVFVYDLENETFSDEDVLVMATDGLWERLTNENVGELVNTTLKKHSLEENRKYLVAAQALVDESRGVLSERGWRTIDNAPATYDDVSVFVIPL 1658
LP ++ Y RP FL L ++ S+DH RP+++ K R L GYAEVINAGK+ NEDQA+ C V+TV + + +K + LP C Y+++FDGHAG AA+ A L H+ E+L I ++L V+P +E E ++FT I + L+IGALE AF D ++ +ER +++ GGCT ++ + + GKLYVA AGDSRA++ R+ + MS + TPE+ER+R+Q + P L+ E+T L+F R ++K+LG + LYR+ M GW++K ++ DLK +I GEGK+AR++ TIG TRG GDHDL+V + + IKPF+ S+PEV +YDL +DVL++ATDGLW+ L+NE V E + L ++ +Y +AAQ LV +RGVL +RGWR ++ + DD+SV+VIPL
Sbjct: 35 LPLRFPYGRPEFLGLSQDEVECSADHIARPILILKETRRLPWATGYAEVINAGKSTH-NEDQAS-CE-VLTVKKKAGAVTSTPNRNSSKRRSSLPNGEGLQLKENSESEGVSCHYWSLFDGHAGSGAAVVASRLLQHHITEQLQDIVDILKNSAVLPPTCLGEEPENTPANSRTLTRAASLRGGVGAPGSPSTPPTRFFTE---KKIPHECLVIGALESAFKEMDLQIERERSSYNISGGCTALIVICLLGKLYVANAGDSRAIIIRNGEIIPMSSEFTPETERQRLQYLAFMQPHLLGNEFTHLEFPRRVQRKELGKKMLYRDFNMTGWAYKTIEDEDLKFPLIYGEGKKARVMATIGVTRGLGDHDLKV-HDSNIYIKPFLSSAPEVRIYDLSKYDHGSDDVLILATDGLWDVLSNEEVAEAITQFLPNCDPDDPHRYTLAAQDLVMRARGVLKDRGWRISNDRLGSGDDISVYVIPL 507
The following BLAST results are available for this feature:
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