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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009828 ID=TCONS_00009828|Name=TCONS_00009828|organism=Clytia hemisphaerica|type=transcript|length=299bp
CCCATCAAACCTCTAACATGGGGTCAATGGCTTTCTGACATTTATCTTTG
GCTCATTAGTCAGCTTGATCCTTTATTCGCCAGCCTTAGtttcAGTGCAC
CCCCAGAGCCTGTCCAGGAACCAGATGATAGCTGGTCCACGTACTTCACC
CAGAGCGCTTGTGGTCTTTCAAAAACCTTTGGctATGAGTACTTTTGTAT
CCCAGAGCCACCAGCTCCGGAGCCCACCATGTCTGAACAAGTCTTCCAGT
ACGTGGATGAAGTTTACCAAAGCTTGTGGTAAACTTTCAATTTCAGaat Run BLAST on NCBI transcript from alignment at sc0000099:574032..575150+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009828 ID=TCONS_00009828|Name=TCONS_00009828|organism=Clytia hemisphaerica|type=transcript|length=1119bp|location=Sequence derived from alignment at sc0000099:574032..575150+ (Clytia hemisphaerica)
CCCATCAAACCTCTAACATGGGGTCAATGGCTTTCTGACATTTATCTTTG
GCTCATTAGTCAGCTTGATCCTTTATTCGCCAGCCTTAGGtgagaaattc
attttttattttgtctaaATGTCTTTGGAACATATTTGACCCGGGTGATG
AGcagaattaaatttttttcacttttatcGCACTTGTCTTATTAGGGAGT
TTATACATTTGTGTTTtttgcgacggagacggtatgCTCCTTATTTGTCT
ACATCCTAACTGATTGAGGACGACAGTAAATCAGCACTGTTACCGTCCTa
aattttgcgggtcagaactacgagtttttccaaatcgctttaaCCAGGTC
GCCAAATCGTCNtaatttcacaatttttcaattttagtttcAGTGCACCC
CCAGAGCCTGTCCAGGAACCAGATGATAGCTGGTCCACGTACTTCACCCA
GAGCGCTTGTGGTCTTTCAAAAACCTTTGGGTAAGTAAACTCAAGGCTTT
TTGTATGCTGTGTTGAAATGttcaaattttaaggtttttaagTATCATAG
TACAATTATTTTAAGAAACTGCAAACCCTTTAAAAACCCTTTGCGGATCA
GAATGGGCTTGAAGCCTTATTTTCTTTGCGCTGATAGAGAAGAAAATGCT
TATCAGCCACACCCTTTTTGAAAGAACAACACTCCAACCTCTTTAATTAG
AACGTCTTCTTattaatccaaaaaaaattttatggtcacttcagttaaca
atatcttataaaccttactccataactcaaaatttccctaACTCGAACAA
AGTTGTGCCCATTTGAAAATCttgtacctgccgtacccgttgcTTCGTTC
TTGGACTCggacaagttttatggtcccttcaaaCAAACTTTGCCTATAAC
TACCATAACTAAAGatttccttaacttgaacaaatttctgttccccgtgc
gtgttccagttatagagactcaactgtataaagttatttgttttcttttc
agctATGAGTACTTTTGTATCCCAGAGCCACCAGCTCCGGAGCCCACCAT
GTCTGAACAAGTCTTCCAGTACGTGGATGAAGTTTACCAAAGCTTGTGGT
AAACTTTCAATTTCAGaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009828-exon-sc0000099-1491911889:574032..574120 | TCONS_00009828-exon-sc0000099-1491911889:574032..574120 | Clytia hemisphaerica | exon |
| TCONS_00009828-exon-sc0000099-1510915933:574032..574120 | TCONS_00009828-exon-sc0000099-1510915933:574032..574120 | Clytia hemisphaerica | exon |
| TCONS_00009828-exon-sc0000099-1575043694:574032..574120 | TCONS_00009828-exon-sc0000099-1575043694:574032..574120 | Clytia hemisphaerica | exon |
| TCONS_00009828-exon-sc0000099-1491911889:574419..574511 | TCONS_00009828-exon-sc0000099-1491911889:574419..574511 | Clytia hemisphaerica | exon |
| TCONS_00009828-exon-sc0000099-1510915933:574419..574511 | TCONS_00009828-exon-sc0000099-1510915933:574419..574511 | Clytia hemisphaerica | exon |
| TCONS_00009828-exon-sc0000099-1575043694:574419..574511 | TCONS_00009828-exon-sc0000099-1575043694:574419..574511 | Clytia hemisphaerica | exon |
| TCONS_00009828-exon-sc0000099-1491911889:575034..575150 | TCONS_00009828-exon-sc0000099-1491911889:575034..575150 | Clytia hemisphaerica | exon |
| TCONS_00009828-exon-sc0000099-1510915933:575034..575150 | TCONS_00009828-exon-sc0000099-1510915933:575034..575150 | Clytia hemisphaerica | exon |
| TCONS_00009828-exon-sc0000099-1575043694:575034..575150 | TCONS_00009828-exon-sc0000099-1575043694:575034..575150 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099 | supercontig | sc0000099:574032..575150 + |
Blast
The following BLAST results are available for this feature:
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