TCONS_00009791 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009791
Unique NameTCONS_00009791
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2960

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009791 ID=TCONS_00009791|Name=TCONS_00009791|organism=Clytia hemisphaerica|type=transcript|length=2960bp
CAATGTGATGATGCACATACACTTTTAGAGAGAAAAGAGATAAagtaaaa
atcataaacaattCACTCAAATCACCATCTTCAATTACAACCATGAATCT
AACAATTGCTTGGTGGACTGGTAAACGCATAGGTGTATTGTTGGCTCGAC
CATCAGTCCTGTCCATGAAGAATCAGTATGTCTGCAAGAGGAACCAGAGT
ACAATGTTAGCTGAAGTTGGCAGATTTGAAACTCCAAAAGTCCAAGGAAA
ATATGAAGCAGGCCAGTTGTTCCTACATCGTGTGTTTGGGTATAGAGGTG
TCATCTTGTACCCATGGATCGCCAAATTCTATGATCTTGATTCCATTACC
GATGGCAAAGACAAACCGATTCTTGAAGAAACaccacaaaatgaaaaaaa
gaatacTAAAGAAACTGCAATGAAGCCGTCATCTTCTACTTATTACCAAG
TTCTCATTGATGAACGAGATTATCCGCACATTTGGACGACCTTCCCATCT
TACAATTTCCGTTTTTATCATCCGCAGAGGGCACAATCGGAGGCTGTTAC
ATTTTTGGGCAACCCAGAGGATACCACACTGTATGCTGTACCCGGTTTGG
ATTATGTGAATCACACGGATATTTTACCGTACATATCAAGTTCTGAGCAA
CCTATCGAACATGATCTGTTCAAGAAATTCCTTCTCCCTAACCAAGACCA
AGTACCGGCTTTCACTGCAAGCCCATCATTGCGCACATGGCATCAAAAGA
ACCACAAGTGGCTTGAATTGTCCGAAGTGATCCGTGAAACTACGGACAAC
ATCCGTGTCACTGCTATTCCTTTTTACATGGGCTCCAGGATGGTTCACGG
CGCCAAAAGCTACTGGtGGCGATATTCCATCCGCTTAGAGAACATGGGTA
TGGAGTCTGTACAATTGAAAGAAAGACATTGGCGAATCTTTTGTCTGTCT
GGCGTATTGGATTCAGTGAAGGGGCGTGGAGTGGTGGGACAAGAACCTGT
TCTCTCAACTCGGCAACCGGCATTTCAGTATAGTAGTCACGTGACGTTAC
CCTCACCAAGTGGACACATGTGGGGTACGTATCGTTTGGAGCGTCCTGAC
GGACGAGTGTTCGACGTCCGTATTCCGTCATTCCCGTTGGAAAGTAAAGA
AGACGATCCAATAACTACGTGATCGGAACGATTCCTTTCGTCAGCCTTAG
TGGTGGTTTAGAGGAGTAGATGCATTCGGGGAAAGAACGAAGTGTGTGTA
AAACCTCTACTCGTTGAGATAGTCCCGAGAAATTATCCTTTACGCGATTC
TAACCAAGCGTCGATGAAAGtagaatagaccttatcggagttttatattt
tttcgaaaaaaagcgATGTAttatgggattgtttcgggggtattgcAATA
GAAATgtcttttagaaaaaatcaatcatcttttttagaaaaatcaaaaac
tccgataagatctattagaaagtttaaaacgcttagttttttcaaaaact
atcggTAATATTATTTTGGTGGTGGAAGTGTGACAGTTAAACAATATGAT
TTATTGTCGAATAGCTTAGagttgctattgtttttgtaCGGTGGAAATGG
ACGTGTTGAATAATGAACTAAGCTTACATAAACGGACACTTCAATCGAAT
TAATTTCGGCGATCTCGAGGTACCTAAGGCACTCcacataaaaaaaacat
ttacgttATCACGTTGCGACCGTGCAAGAGGTTCCGCCCCTTAACGTAaa
cgttttttagtttttttttcaaagcattttgaTATAGACAATGGGATGGG
GCATGGTCAGATGCACTtactgaaaaatataaaaattttgagaaaaacct
aattttttagccaattttcatgattttgatgacgtcacagaaataagaat
ttgaataaCTTCTAGTAGGAGAAAGCTTTTgccctcaaaaaaaattcaag
attttttgcttaCGTCAGCATATTTCAgcaaaaacggtttttttgaaagt
tttgctgacgtcagtaaatttttttttcgtagaTCGCTTCCTTTCGTCGA
TTTACACcgttggtgaaaatttgaagtcaaaagTCATACTTAAAGTTATT
CAAGATTTTCTTTCTATGACATCATCGAAATGgagaaaaatgaagttttc
tcgaaatttttcaattatggAGCAAGTGGGACCATCTGACCATGCCCCAT
CTCATTTTTTTTATCGAAACACTTCGAAAAACCTAAAAACATTTACGTTA
ATGCGTGGTGCCTCATGCGGCCATTGGGGAGTGCCTTAAGTACCCCGAGG
AGATttaatttcgaatttttttgaatatatgccattttcgcgaaaataag
ctATGGCTGACTCGACTCGAGGAATCAGATTTTTGCGTAAAGTACActga
aaattcaatattttgggCGTTTTCAAGGCCTTTTTtagcctggttaacca
agccagtttttacaagGCTAAGATACGGCTAGGCCTTTTTAAACTAATGC
AAGTTTTTTGGTACCAATTCTGATATACAGTAGAGCTTTCGTAGTGCTTA
TTACACTCGTTCTAATTAAAGGTAAGTCATTTCTAGGTTATATGGTCtgt
accattgagtttaaagcccgaagggctagagtagaatctctaaactttcc
caggcaagaaaagtgaagccacttatttcccatccagaacgcgccgcaat
catgacgacggattgtgaCGACGGTTCCTTTGTTCTTTGTTCCTTGATTT
TTTATCTAGCCATAGATTTTAGTtgcaatccggcgtttgtgtaaggGAAA
TaaatggtttcatttcccattaatttgtaaattttgcgtTGGTATATAAC
AAATTTTTCatgtacagtatgtggcccccaaaacggcgatcaaatttaaa
atttctctcaaatctagaggaaaaaaggttttacaaagatttttgctgca
tgaaaaactt
Run BLAST on NCBI

transcript from alignment at sc0000099:53393..63282+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009791 ID=TCONS_00009791|Name=TCONS_00009791|organism=Clytia hemisphaerica|type=transcript|length=9890bp|location=Sequence derived from alignment at sc0000099:53393..63282+ (Clytia hemisphaerica)
CAATGTGATGATGCACATACACTTTTAGAGTAAGTAGGTTGGTCTATcag
atttgtttatttttaagaGACCTTTTGTCACATGACTCTTTGACTGATCC
CCCACTTACGTTAGAAACCAACGTACCATCTTTTGTTTCTGAATGTCctt
gttatttttgtttacttttccaTCTAACATCAATATACTTTTACCTCATG
TCAAATGTactattttttaaatcaattggGTCCattgtgttgttgttgtt
ttttgaattAGTATTCACGTTCTGAGGTCTATCAGCCAGTATAAGGAGTG
GGCTGGTAAGGGGTATGACAGTTTGAGATAAAGAataatctttttaattt
atagaTGTTCTTTTTTAAAGTTATATGGATTTTTTAGTTTCAAACCTCTC
AAAGGAATTCCTGGGTAAAGGCCAGAAATTTTTTCTTGGCCGAGACTGGC
AACAAAATAACTTTTGTTAGTGCACAGGATTATAACACAAAAGTTTCCAG
CCCTTTGCTTTGAgtgcaaattttgaaaaatagccCAGCTTAAGGTTTAT
TTTGTTGATCCATTTTGCAAAAAGTGCAGATTCATTTCAAATGAGTGGGC
AATTAGTGACTAAATGACCCGAGACACACAGTTACATTTCTATTTATTGT
ATATTTTAGGAGAAAAGAGATAAagtaaaaatcataaacaattCACTCAA
ATCACCATCTTCAATTACAACCATGAATCTAACAATTGCTTGGTGGACTG
GTAAACGCATAGGTGTATTGTTGGCTCGACCATCAGTCCTGTCCATGAAG
AATCAGTATGTCTGCAAGAGGAACCAGAGTACAATGTAAGCCATGTTCTT
TTTCAGAATATGTTTCAGGGTTCCCActggtcagggaaaacctggaaatt
gtactattttttgtaaaagtcagggcaaacctggaaaagtcagggaatAT
TTTATTANattaaattcccgccaaatttagttttttcgtccatccgccaa
attaaattccatctaaaaaactttttcggccatccgccaaattaaattct
cgccaaaatttcttcctttaaggtatgtcTTTCCAAGTCagggaaaagtc
agggaattCTGTTTTATAAATGCTTAAAATCAAAAGACTTCTATCAAATA
GTCtcttattttccaaaattttctgtGTCGGACCCTGCTTTCGTCAGGGA
GAAATACCACTTTTTTTAgtaaaaagtcagggaaaataatgtttttcaca
ttggattgacacagatgtggagcaaggttggtcaaaaagaggaaaaggaa
aaaatatttttgcttattatatcagcataatataataataggcagacact
gtcctgatgtgatatgaaatatgtgtctaatatgaaacgggaacacttat
gtaaagaTATAAACCTTTAAGTGTANcaaaaagaggaaaaggaaaaaata
tttttgcttattatatcagcataatataataataggcagacactgtcctg
atgtgatatgaaatatgtgtctaatatgaaacgggaacacttatgtaaag
aTATAAACCTTTAAGTGTAATAAGTTTGTAACAATTATTGTTTCAGGTTA
GCTGAAGTTGGCAGATTTGAAACTCCAAAAGTCCAAGGAAAATATGAAGC
AGGCCAGGTAATTATTCTNGTAACAATTATTGTTTCAGGTTAGCTGAAGT
TGGCAGATTTGAAACTCCAAAAGTCCAAGGAAAATATGAAGCAGGCCAGG
TAATTATTCTAAATTGACAGACTTGGTTAGCACTGGTGAAGGAAGTCTAA
AATCCGAATCTGAGaaaattcaacaaaagaaatactGCAAAATACTATTT
GAAACAGTTTGAAAATGTTCACATCCAAAAGATAGAATtgttatacatgt
tttttttataagcaagtgtctgccccttggtctggctcgtgtatgctttt
aagttctcaaagcatccaggcatagtttatgcttattataagCAATGGAA
TGtcgctagccgtggaatgtctattttttacttgacctctaccaaacctt
tttaagcAGATAAAAAATggtaacttgaaaaatatttcaggctgacatat
GTATGGGAAtcctgcaaatctgagccttcatatgcttataagcgttatgc
ttatNAGGCTGACATATGTATGGGAAtcctgcaaatctgagccttcatat
gcttataaaaaaacacgtatTTTGCATATctacaaaataatgaaaatgga
aGGATTATGATTAACTAATGCACAATAAAGTGCTAATAGGGGTTCTTTAT
ACAAACACAGTACAATTTTTCATTCTCCTATTTTTTCATTCCACCTACAG
TTGTTCCTACATCGTGTGTTTGGGTATAGAGGTGTCATCTTGTACCCATG
GATCGCCAAATTCTATGATCTTGATTCCATTACCGATGGCAAAGACAAAC
CGTAAGTAGTTTCAAACTTATTGGATAGAAAAGCTATGGATCGATGTGTC
TACGTTCTGAAATCTTCAACTTATTTTGGCTTGGATCGCGAGTTTTACAT
CTGGCTACATGTTGGAGAGATCATTTCACCTATACAATGGAGATATTATT
TCACTTAATCAAACACAATGGAGAATATTTTCTTCATAATTTCTTCCGAG
ACCTTTTTTTGATTCTGATCAACCATAATTATCAAACGTAAAATGTAGGA
AAGTTTCGGACAAGAAATTTGTTTCAGCCTCATTAAGATAAGTCACAAGG
CAAATCTCCATAATGTTATTTTTGGTAGGATTCTTGAAGAAACaccacaa
aatgaaaaaaagaatacTAAAGAAACTGCAATGAAGCCGTCATCTTCTAC
TTATTACCAAGTTCTCATTGATGAACGAGATTATCCGCACATTGTAAGTT
TCTCTATTCATTTATTGTATATATTTGTATACCGGGTGCGTCTAAAAATC
GCCCCTATTTTACAATCTTTACATTTTTCTATTCAGTTGAGctgcttgaa
tttttttgtgagttgtacattttattttcaaacatttctcGAAGTATATC
TGAATATTTGTTGTTGGTACATTTATATAGTGTACTCTCTAACTAACGAA
AGAACATTGGGGTTCctttagattttcaaccttATCAGTTAAAGCCAGAT
TTTTTGTAATAATTGCCagatttttcagattgtttGCTGTTTGGTTTTCC
GGACTAAAAAATGTAGCCCCTGACTTTCTCcgatgtccgctaattagaga
gCTTGTTTAAAATTTATCCCAATGATTTTTTAAGCTTCATTCACTCACTG
CATGACAATATAAACATAAGTATGCACAAAGTAGACTACCTCTTTGGTGA
GTAGGAGGGTTCTACAAGCACGACaccaatttcatatttttgcaGTGGAC
GACCTTCCCATCTTACAATTTCCGTTTTTATCATCCGCAGAGGGCACAAT
CGGAGGCTGTTACATTTTTGGGCAACCCAGAGGATACCACACTGTATGCT
GTACCCGGTAAAGGCTCGTTAATTTATTAAGGGTTTCTAAATTTGAtgaa
tttgaattgaatttaaGATTTTTATGGATCCatcttttcaattaaaagat
tttctataaCAACCTTATCctttgttggacctacctggaggtcctataaa
ttaacctttgtccgttcgtctgtccgTCTGTTCGTCTGTTACCAGCTTTT
CTCGAGATTGGCTCATTATTTTTTTCTGATTTTTGGAACAAAGCTGCAAA
ATAGTAATGTCCAAAATGTGACGGAGCCACATTTTTTCCGGCCGAAAATA
CCAGAAACATTTTTTTTGGCATTCTCTCGAGATTTTATCATTAGTTTTTC
CGATTTTTTGCACAAAGATATGACCGAGTCCTAATTTTGAGAAAAATTAT
TTTCCAAAAATGTTGGAAATATACTGGAAATTGCCGTTTTTGTAGATTTT
CATTGGACTTTTTCTAATAATCGTCAATACTGATTTTTGCAACCGGAACT
TTCGATTTCTTTTTTCCCTACTCCCCTTCCCTCTCCCCCCATCAACAATC
AATGGTGAAATTTGATGCGTTATGCATTTTGGCTAAGCGCTATATTTTCT
GACTGATTGTTGAATTTTTCTCCTCATTGCTATCTAACTTTCATCGTCAG
CTAGGTCCAATCAGCATCTAGCCTGTTTTGAACAAAACAAAAAAAAGTAG
CAGTCGAGTAGTCGCTCGATGACAAAAGATTTACACAAAGATATAAATTG
AATTTATATTCAATTATATAGCCAGGTTTTTTATTCTTTAACGACTGGTG
CTATTAATAAAAGAGTGAAATCCAATGATCTGGTGTTGTCTTTTTTTAGG
TTTGGATTATGTGAATCACACGGATATTTTACCGTACATATCAAGTTCTG
AGCAACCTATCGAACATGATCTGTTCAAGAAATTCCTTCTCCCTAACCAA
GACCAAGGTAAAGTAACTCATATTAATATTATTCAGACATTCACCAAATG
TTCATAATAACTCGGTGTCTGACAGTAGCTTGGTGGGTCGACCAAAATTG
gggcaaactggggaggcaattttaaaagattttgattttcgtgCCCCCTA
TTAAAAGTAaacatctttgaaaaaataacgcgAGCGAAACGATCACGaaa
ttttttgggtatttctGTCCTTTTGATCGAAAACTACCAATTCTAAGAGG
TAAAAAAGCAAGGGGGTGCcaaaattagtaatcagaggcATATTTTTGCG
CCCTTTTTATTTCGTCGCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNccccccccccccccaaaaaaaaaaatcggccGATCGGGT
GGCACTGCTTCCTgtcccctgccaccacgctactggtgTCTGCTTCGGTT
ACCTCCATATCTTGAGCATCACCACATCTCTCGTAAACTTTTCTGGAATT
ATTTATCAATTATTCAATATTCTTCGTTCTACAGTACCGGCTTTCACTGC
AAGCCCATCATTGCGCACATGGCATCAAAAGAACCACAAGTGGCTTGAAT
TGTCCGAAGTGATCCGTGAAACTACGGACAACATCCGTGTCACTGCTATT
CCTTTTTACATGGGCTCCAGGGTAGGTGCTTTTATACAACATATCATAAA
CGTCAAAAGctgaagaaaaacagaaaatccaaaaaagccATTTCCTTGAG
CATTAACGTAATTTCGAAAATGCTTTTTACAATAGTAGGGTACTAAGGGT
TCAGTCAGTAAGGCCTTCTAACCGAGGGTTTTTTAATTACcttcagtatt
ttcgtttctttTTAGATGGTTCACGGCGCCAAAAGCTACTGGGTAAGAAG
AATCTAGTGAAATTTGTTCTATATAATCTCTTTTAACGGGATCCGTTGAA
TTGTATCCACCCGTCGGACGGGATGTCGGACGGATAAAATGCATTGAATT
TTGTATCAGTGCATATAAGAATTCCGTAGGGAATTTCCCTTCTGTCCACT
ATTCTCTAAGtttgaaccacaagtgattttgtgGTTTAGAGATGCTGAGG
TATGCAgagctgacgagtcctaataaggacgaaatgcatatgctgttctg
ccacccaaatctcctgaaagaaggtagttggacagaaattcttatttctt
cacatatataatTGGTTTATAATTTATCGTTGTTTATGATTGGCATGATT
AGCAAGATCAGTTTTTTATTGCAACCAAAGAGGAAAAAAGGGTAAAATTC
ACCGAGATACCAATAACATGTATCCATAAATGATTGATagctttttcctt
tcttttttcagtGGCGATATTCCATCCGCTTAGAGAACATGGGTATGGAG
TCTGTACAATTGAAAGAAAGACATTGGCGAATCTTTTGTCTGTCTGGCGT
ATTGGATTCAGTGAAGGGGCGTGGAGTGGTGGGACAAGAACCTGTTCTCT
CAACTCGGCAACCGGCATTTCAGTATAGTAGTCACGTGACGTTACCCTCA
CCAAGTGGACACATGTGGTAAGATACTAATACCCTTTTTTATGAAGCCCC
ATAATAACATCGCATTGAATTTTTTCCAACGTTATTAAAGTTTAAAAGGt
caaaagtaagaaaatatacaatttaggacttgcttttttgattttgatac
cTGGATTATTTTGATAACAGGGATGTTCAATGTCATCTTGATCTTCTCTA
AGTATATTATATTCCgtataaaaaacactggtctagaagcttattgtttt
aactttttgttagcttttcccTTGGTTGTTTGGTTATTAgacaaaagatg
aaaatcgatttgctcagtttttgatcacgttaccaagtactcctcttggg
attgttTTAAGATtaaatcacatgatcaaaaagtgagcataacaaactaa
tttctcaacacaagttcaagtaagaaacaatggaaagaaaaaagGCTTTC
GGACCGGGTGTTCTTATACGGACTACGGAGTATATAACAGCGTATCTTAC
TGTCTACCCTAACCCCTTTCTTGTGCgatctactttaatgggataaactt
tcgcggggattaaatttcgcggttgggcctatccacgaaattcaaatatt
ttgcgNTTGTGCAAGTAACCATTtatatagtatttatttgacatattttt
gtttagaaatactTCGGGGacgaggcccttccaaattcccatggggactt
aatttcgcggattttcgcggatgacacccaaatccgcgaaatccgcgaaa
tttaatccccgcgaaagtttatcccattaaagtataagAATGATTGTAAC
ATATCCATGCTGTGGGGCCATGCTTATCGAATAATCCATTATTTATTCAT
AGGGGTACGTATCGTTTGGAGCGTCCTGACGGACGAGTGTTCGACGTCCG
TATTCCGTCATTCCCGTTGGAAAGTAAAGAAGACGATCCAATAACTACGT
GATCGGAACGATTCCTTTCGTCAGCCTTAGTGGTGGTTTAGAGGAGTAGA
TGCATTCGGGGAAAGAACGAAGTGTGTGTAAAACCTCTACTCGTTGAGAT
AGTCCCGAGAAATTATCCTTTACGCGATTCTAACCAAGCGTCGATGAAAG
tagaatagaccttatcggagttttatattttttcgaaaaaaagcgATGTA
ttatgggattgtttcgggggtattgcAATAGAAATgtcttttagaaaaaa
tcaatcatcttttttagaaaaatcaaaaactccgataagatctattagaa
agtttaaaacgcttagttttttcaaaaactatcggTAATATTATTTTGGT
GGTGGAAGTGTGACAGTTAAACAATATGATTTATTGTCGAATAGCTTAGa
gttgctattgtttttgtaCGGTGGAAATGGACGTGTTGAATAATGAACTA
AGCTTACATAAACGGACACTTCAATCGAATTAATTTCGGCGATCTCGAGG
TACCTAAGGCACTCcacataaaaaaaacatttacgttATCACGTTGCGAC
CGTGCAAGAGGTTCCGCCCCTTAACGTAaacgttttttagtttttttttc
aaagcattttgaTATAGACAATGGGATGGGGCATGGTCAGATGCACTtac
tgaaaaatataaaaattttgagaaaaacctaattttttagccaattttca
tgattttgatgacgtcacagaaataagaatttgaataaCTTCTAGTAGGA
GAAAGCTTTTgccctcaaaaaaaattcaagattttttgcttaCGTCAGCA
TATTTCAgcaaaaacggtttttttgaaagttttgctgacgtcagtaaatt
tttttttcgtagaTCGCTTCCTTTCGTCGATTTACACcgttggtgaaaat
ttgaagtcaaaagTCATACTTAAAGTTATTCAAGATTTTCTTTCTATGAC
ATCATCGAAATGgagaaaaatgaagttttctcgaaatttttcaattatgg
AGCAAGTGGGACCATCTGACCATGCCCCATCTCATTTTTTTTATCGAAAC
ACTTCGAAAAACCTAAAAACATTTACGTTAATGCGTGGTGCCTCATGCGG
CCATTGGGGAGTGCCTTAAGTACCCCGAGGAGATttaatttcgaattttt
ttgaatatatgccattttcgcgaaaataagctATGGCTGACTCGACTCGA
GGAATCAGATTTTTGCGTAAAGTACActgaaaattcaatattttgggCGT
TTTCAAGGCCTTTTTtagcctggttaaccaagccagtttttacaagGCTA
AGATACGGCTAGGCCTTTTTAAACTAATGCAAGTTTTTTGGTACCAATTC
TGATATACAGTAGAGCTTTCGTAGTGCTTATTACACTCGTTCTAATTAAA
GGTAAGTCATTTCTAGGTTATATGGTCtgtaccattgagtttaaagcccg
aagggctagagtagaatctctaaactttcccaggcaagaaaagtgaagcc
acttatttcccatccagaacgcgccgcaatcatgacgacggattgtgaCG
ACGGTTCCTTTGTTCTTTGTTCCTTGATTTTTTATCTAGCCATAGATTTT
AGTtgcaatccggcgtttgtgtaaggGAAATaaatggtttcatttcccat
taatttgtaaattttgcgtTGGTATATAACAAATTTTTCatgtacagtat
gtggcccccaaaacggcgatcaaatttaaaatttctctcaaatctagagg
aaaaaaggttttacaaagatttttgctgcatgaaaaactt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005482XLOC_005482Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009791-exon-sc0000099-1491911889:53393..53421TCONS_00009791-exon-sc0000099-1491911889:53393..53421Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1510915933:53393..53421TCONS_00009791-exon-sc0000099-1510915933:53393..53421Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1575043694:53393..53421TCONS_00009791-exon-sc0000099-1575043694:53393..53421Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1491911889:54052..54227TCONS_00009791-exon-sc0000099-1491911889:54052..54227Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1510915933:54052..54227TCONS_00009791-exon-sc0000099-1510915933:54052..54227Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1575043694:54052..54227TCONS_00009791-exon-sc0000099-1575043694:54052..54227Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1491911889:55081..55141TCONS_00009791-exon-sc0000099-1491911889:55081..55141Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1510915933:55081..55141TCONS_00009791-exon-sc0000099-1510915933:55081..55141Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1575043694:55081..55141TCONS_00009791-exon-sc0000099-1575043694:55081..55141Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1491911889:55743..55843TCONS_00009791-exon-sc0000099-1491911889:55743..55843Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1510915933:55743..55843TCONS_00009791-exon-sc0000099-1510915933:55743..55843Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1575043694:55743..55843TCONS_00009791-exon-sc0000099-1575043694:55743..55843Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1491911889:56171..56285TCONS_00009791-exon-sc0000099-1491911889:56171..56285Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1510915933:56171..56285TCONS_00009791-exon-sc0000099-1510915933:56171..56285Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1575043694:56171..56285TCONS_00009791-exon-sc0000099-1575043694:56171..56285Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1491911889:56788..56899TCONS_00009791-exon-sc0000099-1491911889:56788..56899Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1510915933:56788..56899TCONS_00009791-exon-sc0000099-1510915933:56788..56899Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1575043694:56788..56899TCONS_00009791-exon-sc0000099-1575043694:56788..56899Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1491911889:57742..57849TCONS_00009791-exon-sc0000099-1491911889:57742..57849Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1510915933:57742..57849TCONS_00009791-exon-sc0000099-1510915933:57742..57849Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1575043694:57742..57849TCONS_00009791-exon-sc0000099-1575043694:57742..57849Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1491911889:59527..59663TCONS_00009791-exon-sc0000099-1491911889:59527..59663Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1510915933:59527..59663TCONS_00009791-exon-sc0000099-1510915933:59527..59663Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1575043694:59527..59663TCONS_00009791-exon-sc0000099-1575043694:59527..59663Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1491911889:59858..59884TCONS_00009791-exon-sc0000099-1491911889:59858..59884Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1510915933:59858..59884TCONS_00009791-exon-sc0000099-1510915933:59858..59884Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1575043694:59858..59884TCONS_00009791-exon-sc0000099-1575043694:59858..59884Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1491911889:60354..60559TCONS_00009791-exon-sc0000099-1491911889:60354..60559Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1510915933:60354..60559TCONS_00009791-exon-sc0000099-1510915933:60354..60559Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1575043694:60354..60559TCONS_00009791-exon-sc0000099-1575043694:60354..60559Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1491911889:61395..63282TCONS_00009791-exon-sc0000099-1491911889:61395..63282Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1510915933:61395..63282TCONS_00009791-exon-sc0000099-1510915933:61395..63282Clytia hemisphaericaexon
TCONS_00009791-exon-sc0000099-1575043694:61395..63282TCONS_00009791-exon-sc0000099-1575043694:61395..63282Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000099supercontigsc0000099:53393..63282 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.330209	0.119533	0.711551	0.185753	2.30121	1.84386	1.77776	1.61415	1.50163	0.955813	1.52497	0.598168	0.606287	2.1532	1.06251	1.20079	0.706179	0.705717	0.627138	0.790491	0.793181	0.634038	0.59915	0.549312	1.45618	1.6734	0.661044	0.239094	0	0.236015
Blast
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BLAST of TCONS_00009791 vs. Swiss-Prot (Human)
Match: PDIP2 (Polymerase delta-interacting protein 2 OS=Homo sapiens GN=POLDIP2 PE=1 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 5.213e-122
Identity = 190/339 (56.05%), Postives = 237/339 (69.91%), Query Frame = 3 
Query:  150 PSVLSMKNQYVCKRN--QSTMLAEVGRFETPKVQGKYEAGQLFLHRVFGYRGVILYPWIAKFYDLDSITDGKDKPILEETPQNEKKNTKETAMKPSSSTYYQVLIDERDYPHIWTTFPSYNFRFYHPQRAQSEAVTFLGNPEDT-TLYAVPGLDYVNHTDILPYISSSEQPIEHDLFKKFLLPNQDQVPAFTASPSLRTWHQKNHKWLELSEVIRETTDNIRVTAIPFYMGSRMVHGAKSYWWRYSIRLENMGMESVQLKERHWRIFCLSGVLDSVKGRGVVGQEPVLSTRQPAFQYSSHVTLPSPSGHMWGTYRLERPDGRVFDVRIPSFPLESKEDD 1157
            P+  +   +++  RN  +  +L  VG FE PK  GKYE GQLFLH +FGYRGV+L+PW A+ YD D  +   +K    E P      +KE  +K  + TYYQVLID RD PHI              QR+Q+EAVTFL N +D+  LYA+PGLDYV+H DILPY S+ + PI+H+LF++FLL +Q + P F A  +LR W +KNH WLELS+V RETT+NIRVT IPFYMG R    +  YWWRY IRLEN+  + VQL+ERHWRIF LSG L++V+GRGVVG+EPVLS  QPAFQYSSHV+L + SGHMWGT+R ERPDG  FDVRIP F LES +D+
Sbjct:   41 PASTTTTRRHLSSRNRPEGKVLETVGVFEVPKQNGKYETGQLFLHSIFGYRGVVLFPWQARLYDRDVASAAPEK---AENPAGH--GSKE--VKGKTHTYYQVLIDARDCPHI-------------SQRSQTEAVTFLANHDDSRALYAIPGLDYVSHEDILPYTSTDQVPIQHELFERFLLYDQTKAPPFVARETLRAWQEKNHPWLELSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQASSGHMWGTFRFERPDGSHFDVRIPPFSLESNKDE 359
The following BLAST results are available for this feature:
BLAST of TCONS_00009791 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDIP25.213e-12256.05Polymerase delta-interacting protein 2 OS=Homo sap... [more]
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