TCONS_00009750 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009750
Unique NameTCONS_00009750
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2559

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009750 ID=TCONS_00009750|Name=TCONS_00009750|organism=Clytia hemisphaerica|type=transcript|length=2559bp
CAAAATCTTGTACGAAGTGTCTCCTTGAATCTAGACCCAAAGAATACGAC
GCCGCCAACGACGACGGCGACAACAAAGAAAATACCAAGGAACAGTCGTT
TAGGCGtGCCTCAAAATCAATACCATGACTACCGGAGGCGATTTATATGT
TATTGGTGTGATCGCCGCTTCCCACATTTCAGTGCGTTGAAAGCACATAT
TTCGGCCCATTTGGAGAGCGCTAGAAAGTTATGTACCATTTGTAATAAAA
CATTCAGCAAAAAGAGTTCACTGGAAGAACACATCAGAACTCATACGGGT
GAGCGACCATACAAATGCAACCAGTGTGGAAAAACGTTCGTTACATCAGG
AAAGCTGACATCACATTTGAAAATACACGCCGGCATTTACGCCCATCACT
GCCAATTGTGTGGAAAGAAATTCCGCGAACACTACAATTTGAAGATGCAT
ATGAAAATGCACGAGAGGCGTGCTCAAGAGGAGAAGGAacctaaaaaaac
aaagatgTGGAACTGTAAGGAATGCGAGGCGGGTTTCACGCGCAAAGAAG
ACTTGAATTCTCACAAGAAGGAAGATCATAAAACACCACATCAACTCATG
TTAGAAGAACGCAAACTAAAGAGAAAagctgaagaaaaagaaaaagcagT
AAATGAGGATGGTGTATCAGCCGCCAAGAAACGAACTTTGAGAACAACCG
GCTTCACCCAAAAAGAAGATGGCACATATGTTTGCGATTTATGTCAAAAA
GAATTCGTAAAGAAGGATTACCTGAACCGTCATTTAAGACGTCACGAATC
AAGCACCGCTACGGATTGCGGAGAATGCGGGAAGACGTACCGAGATAAAC
CAACTATGCGACAACACATGGTTGATGCGCACGGAAGCGAAGCGAAACAC
TATTGCAATATATGTAAGCAAGGCTTTGTTATTTTGTCAACCTTACAACG
TCACATGCGGATCCATCTCGATTCACGTCCGTTTACTTGCGATCAATGTC
CGGGTACTTACAAATCGAAAGAGGATTTAAGGCGCCATAAGCGGACCCAC
GAGGCCGACCGCCCGTACAAATGCGATATTTGTCATAATGGATTTGTTGA
TAAATCAGGGCTGAACCGTCATATGCGGATTCATACCGGTGAAAAACCAT
TCACGTGTCCGGATTGCGGGCAGTCGTTTACTCAATGTGGAACCATGAAA
CTCCACCGTGCTAAGAGACATCCCAATAGCACTATCGAGCTTACGGACCT
TCGTTCCGGTGCACGAATTGCCGCCGAGATGACGACGAAAACCGCCACTG
ATGAAGACACTCCGAAAATTCCCGAAAAATCTGACCCTGATGAAGAAGTC
ACAGAGTCGGAAGACGAAACTGCTCCTACCACGGAAAACTCCAAGTTTAG
TACGGTTCAAGAACTCTTGAATTGGATTGGTCAAAATCAGAATTCAGAAC
AGAATACGTCATACGAAATGTAGTGTGACTTGATTCTGAAAAGGTACAAC
AACTGTGTATTGTTTAGATTCAGANTTCATACGAAATGTAGTGAGACTTG
ATTCTGAAAAGGTACAATAATTGTGTATGGTTTAGATTCAGAGATTACCA
ATTTCCcatcatttttccattttgtgcAGACGAACGATTGAATGAGCTTG
ATACTCTGGAAATGACTCGGAAAATGTTTTTCGAGGAATGAGACATTTTC
ATTCGTATGTGTATCAGATATTCTCTCTACAttttttaggcgtacaaact
ttcgctaGGTCgagaaatcgcgaaatttacgaaaatttattttcgtgAAT
TGGGCGAAAAATGTTCTTTCAATCAAGAAAAGTTTCACacgaaaaaatgg
cttagagtgACAAACATTTCTTGAATTGAAAGTAAAACTTCCTTATTATG
AGGATTAAGCAGGTTAAAGAGCGCCATAAatgttacattttattttaagt
tagaagtttatagattttctattttgtttagATATTTCGCGAGCatcata
aacttttgcgaatggccttttaagaattttagagacatttactttcgcga
aaagagctaaaattcgcgaaaattgcgaaagtttctgttcgcgaaagttt
gtacgtaCGCCTGAAGTAAGCCCAACGACCATATTTCATACAGAAAATAT
TCATCTTTCTTGATGTATGATAAAGTCTTTTACTATGTTATCAAATCAGG
TGTCAGTAAAATTACAAAGACGCGAATAACCATTGATACAGTTTGGTAAG
ATGGCGATCAAATTCGAAATTGAAGAAGATGTTATTAATGACGGCTTCTT
TGAAAAGGACTAGTAAATTGTCTAAACTTTCATAGGTactttttattgat
ttatttgtAATGATTAGTTACATGTTTGGACCAAAAAGGACGGTGGCCCA
TAATGCTCACGGCGTACTTCCAGTTCTGACACACctctaggctgctggca
tccactaacggattcgtgttCCTtatacctggggttttgtagaggtctgc
gattcagactaacaCACTTCCAGTTCACAAATTTTACAAGTGCTGGAAGT
GTCTTGTGA
Run BLAST on NCBI

transcript from alignment at sc0000098:420442..432676-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009750 ID=TCONS_00009750|Name=TCONS_00009750|organism=Clytia hemisphaerica|type=transcript|length=12235bp|location=Sequence derived from alignment at sc0000098:420442..432676- (Clytia hemisphaerica)
CAAAATCTTGTACGAAGTGTCTCCTTGAATCTAGGTTTGTAGCAATCTTT
TGTAAGTGTGAACATAATGCTGTCAAAGAATGTCTCCAAAATCTTGTACG
AAGTGTCTCCTTGAATCTAGGTTAGTAGCAATCTTTTGTAAGTGTGAACA
TAATGATGTCAAAGAATGTCTCCAAAATCTTGTACGAAGTGTCTCCTTGA
ATCTAGGTTAGTAGCAATCATTTGTAAGTGTGAACATAATGATGTCAAAG
AATGTCTCCAAAATCTTGTACCAAGAGTCTCCTTGAATCTATAGAAATAT
GTTCTAAATGTGAACAATAGTTACACCCCTGTGTCACAGACCCGGTGGGA
TCCTTCCCCACTGGAAAACTTTGCCAAAATTTCGTCCACTGTGGGAAAAA
TAACCTACAATTTCGATCCAACTGGAAAATTGACTTTTAGTATAAATTTA
ATCTCCATTCAATGGAAAAAGTTGCAATCCAAAAGTATCTCAATTAAATT
TTTTACCTGAGAATGATTTCTATTGATTATTATTCAAAAAACATTTCAAC
AAATATTTTTCAGCATAAGCTTTTCGTTTTATTAAAAAACATCATCAGTG
CATATACAAGTAAAACGTTCAAAATAAAATGNACGGAAACAAACTTTTTG
GGTAATTCGAACAGGTTTTCGGGTATGATCATATCATTCTGCTCTTTTTC
ATGAAAAATCTTAACAACACTTGCTACAAATCTTGAAGGGAAACCAGCTC
TTTCAAACTTATCAACTACAATTTCCTTTTCCATTGAAAAATCTGATGCA
ATATTCTTTGTTCGATGTAGGTCAACATTCACAGCATTTCGCTTGAACTT
TTTGGGAATTTTTGATGACCAATGGACTGGAACCTTTTTATCACTCCGAA
ATACTGATGTGCTAATTTCGCCATTTTCATACGTTAATTTGGTGTCAAGG
GATTTTTCGGGTTTCACTTCAACTGTGAACTTGATATTTGGATGATAGTT
ATTCAGACTCTCGAGAAGGGTATCCGGTTCATCTTTATGTCGTTTGATTA
TTAAATCATCGACAAACCTTTTGTAAAACTCTGGTTCGGTAGGGGTTATG
ACATCTTTTTCCAACTTTGTCATGTAAATGTATCGAAAGTAACTGACAAT
GGACCACCCATAGTGCAGCCATCGATCTGTTTGTAAAATTTGTCGTTGAA
CATAAAAAGACTATCAGTGGATAATTTTAGAAGTAAACGCTTGAAAACTG
TTTTTGAAGCAATTGGTTTGAATTTCTTTCTATTGTAGATTTTGTCAATA
ATATAATCGATAGTTGGACGTACCGGAACATTTGTAAATAGACTTTCAAC
ATCGTACGAAACAAACTCCTCCGAATCATTCAATCGCGGTAAATTTCTTA
TCATTGAAGGGAATTTTTGAGTGTTTTTGATCACGTAGTCATTTTCGTCA
ACCAAAGGTTTTAAGTAGTTTGCGATAACTTGAGACGCGTTGTATGTTGC
AGTACCAACTTGAGCGATAATAGGACGAAACTTCAAGTCGTTTACGTTGA
TTTCCGTATTGCTTTTGAACTGGTTGATTTGATGACGGTATCATGTCTTT
ATATTTTTCAAACTTTTTGAAATTTCTGTAGAGGAAACTTTTGAATTTTT
TGAGGTCTTCCATGGTAGTATCAGTTGAATTTTTGTAAACACCTTTTGTG
ATTCCTTCATCGACCATACTTTGAAGTNTTTTCTCAAACTTTTAAAAAAA
GTTTGTCATAACCCCTACCGAACCAGAGTTTTACAAAAGGTTTGTCGATG
ATTCAATAACCAAACGACATAAAGATGAACCGGATACCCTTCTCGAGAGT
CTGAATAACTATCACCCAAATATCAAGTTCACAGTTGAAGTGAAACCCGA
AAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCCTGTATATGCACTGATGATGTTTTTTAATAAA
ACGAAAAGCTTATGCTGAAAAATATTTGTTGAAATGTTTTTTGAATAATA
ATTAATTTTCTGGCTATATTTTTTTACAACAACGATTTCTATTGACTGAA
AGCTATTTTGATGATCAAGAAGTGTTACTGGTAACAGATAAATTTATAGG
TCATTGCGTTATGGATTGTATCTAGTCCGTATAAAACACCCTGGTCTGGA
AGGCTATTGTTGTAACTTTTTGTTAACATTTCCCTTTGTTTAATAACGAT
TATAAAAATCGATTTGCTCAGTTTTTGATCACGTTACCAAATACTCCTCC
TGAGATTGGTTCAAAAGTTGATCACATGATCAGAAAATGAGCAAACCAAA
CTAATTTATCAACGCAAGTTCAAATTCGAAACAATAGAAAGAACCAAAAG
GCTTCCAAACCGGGGTTTCTTATACGGACTATGATCTAGCATTCATGTTT
TCGTTTCAGACCCAAAGAATACGACGCCGCCAACGACGACGGCGACAACA
AAGAAAATACCAAGGAACAGTCGTTTAGGCGGTAAATCTATGTAGTTTTG
TAGTTTTCGTCCATTGAGTTTAAAGCCCGAAGGGCTAGAGTAGAANGGTA
AATCTATGTAGTTTTCGTCCATTGAGTTTAAAGCCTGAAGGGCTAGAGTA
GAATCTCTAAACCTTTCCGAGGCAAGAAAAAGTGAAGCCACTTACTTCCC
ATCCAGGAGTCTCGAGTCTAGCCCTTCGGGCTTGGAAGTGAATGTTTTCG
CCATCATGGAAGTAAATGTTCGAATCTGTACGCAAATCGAACGTTTGCTT
CCATAATGGCGAAATCACGAAACTTAACAAAACATAAAAAAACATTGACA
CTTATCAAGCCTTTTAAGGACGCGGAAAGATTTTCTAAAAACAAATTGAA
GAATCTTGATTTCTTTTTCTCTTTTTTGGTTGGAAAAAATAGTCCACCTA
AAGCTTTTTGATAGACTGGATGGTACGATCATTTGGCCCCTTCTTGGTAT
ATGATAGCTTTCAATTTTTGTTTTTTTGCCTCTACAATCAGTGCCATAAC
ATGTTGGCACTTTTGGCTAATTTACCATTTTTGGAAAATTGAAGTTCGAG
CGAGAATGTAAATTTCAGGCCTTAAACTTGATTTCATCGATTATTTCGAT
CTGGGAGGGATTTATTGGTTTCTAGGCTATATTTCAAGCCCTACTGGACC
ATTTTTGAACTTTTGGATCCTTAGATCCTAAGGTCCTAAGTTTTAAGTCT
AGCGTTAAAACTCAGAGTTAAAACTCTACCTTTCGAACCTACTTTAGAGC
ACTTATAAATCGATTGTGGTTTCAAAACTTCCCAGTGGATTTCCCTTTTG
TGCCATGTATTTTGTCACTGATTGTAGTTGTTTTTGAAAGGTAACAAGGG
GGTGAAGGGACCTTTTTGTTTGAAAATAAGGAATTGCAAATTTTATTTAT
CAACTTCGAGCACTTTTTTTGTTACTTTGGATTTGTGCGTTTTTTGTTTT
CCAAAATGGTGATCTCACCAAGTCTAAGTCTACTTAAACTTGACTCGGCG
TCATCAAAAAATATCAATAAGCAAATTTCAGCCTGAAGTAGACTCCAGTA
GAAAGGAAAATGGAGGTCGAAACTAGTAACCGAGGAGCATTTTGATGCCC
CTAACATTTCGCTTCCCTCACAAAAAAGCTACTAGACCCTACAGTTGACT
TTCTCTAATTCGATCTTCGCTGGACCAAAAATTCTCTTCCAATTACAAAG
AGATTCGAATTATAGAGAGTATTTTAGGTGGCTTGCTCATTGACGGGTTC
TGAGAATTAGTTTGAATTAGAGAAAGATTCGAATATGAGAAGTTCGAATA
AACTGTCACCCACCATGACTGGGCAACAAAAAAAATGTTCACCCTCTAAA
TGTTCAAAATAGATGCCACTTTAATGGACTAAAATATTCTAACTTGATTT
TGACTTGTTAGAATCATTGCATTAATATTTTCAATCTTTTGTACCGTCAT
TTCTCCATTTTAGAAGATTGAGTTTGAAAAATCAATTTGAAATTGAGTTT
TTGCCACCGAATAACGGTGGTAAAAAAGTGCTTGAAAAATACCCTGGGTT
ACTGTATTCTATTTGTAGGACCACATTCGCATGATTACAGGCGGTTCGTT
TGTTTTTGGTGTGACCGGCGCTTTACAATCTACAGCATGTTTAAAGTTCA
CGTCGCCTCTCATCTGGAGGCGGTCAGGGTGCCATGTACAATATGTTCTA
AATCATTTACGACAAAGAGTTCCTTGAAAGACCATATGCGAACTCACACA
GGTAAATACATCACTTTGTTCTTATAAAAAAATGTACTTTATTTTTTATT
TACAGTGCCTCAAAATCAATACCATGACTACCGGAGGCGATTTATATGTT
ATTGGTGTGATCGCCGCTTCCCACATTTCAGTGCGTTGAAAGCACATATT
TCGGCCCATTTGGAGAGCGCTAGAAAGTTATGTACCATTTGTAATAAAAC
ATTCAGCAAAAAGAGTTCACTGGAAGAACACATCAGAACTCATACGGGTA
ATAACCACTGACCTTTATATACCCCTGGACCAAGTTATATCCGCCATCAA
TTTTTTGAATTGGTACCCGTAAAGAAGCCATTGCAGTGTTCAAAATGAAC
GTTTAACGGCGCTACATCATCAAAAGTATTCCAGGAAAAATAAATCTAGC
GCTCTCAATTCATTTACACCGCTATTGAGTAGTGCCACCATTAGGGTACC
ACTTTTCAAAAAACTCCGATCAAAGATTTTTCTTGGCCGGGATTGAGAAG
CTTGGTCCAGGGTTTATTAAAGGTCAGTGATAATAACACTGATCTCTTTC
GTAGGGGATCTCTACATATATTTTCTAATCTACTACCCATGTATGTTGAA
TATAAAATAATATAATAGACCTTTTCATAAAATAACAGCACGAACAACAT
CTGCCTCGTTTTCAAACAATCACCAAGATGATCATATCTTATGCGGCCTA
AAATGACACATCTTTCAATGAAGTCGAGTTTTGATGAACTCCATTTGGTA
TTAAAAAGGGGCCAGTAGAAGTTCACAATGTAATTTATGAAAAGGCCCAT
TAAAGTCCTCCTGCAGATTCAACAGTGATATAGTGGAATCCATCTGATAA
AAATTGTTCCTCTTATTTTATTTCAGGTGAGCGACCATACAAATGCAACC
AGTGTGGAAAAACGTTCGTTACATCAGGAAAGCTGACATCACATTTGAAA
ATACACGCCGGCATTTACGCCCATCACTGCCAATTGTGTGGAAAGAAATT
CCGCGAACAGTAAGTTGTAGTCATCGTCATATTCCTTTAGAAGAGGAAAA
TATAGAAAACTCTGAACTAGAAAAATATATCCCATTTTGTACGAGTAAAA
GTGTGATAACTGGTTTATCGTCAACTTGAAAAATATTAAAAAACTTTTCT
GGGGCCTGGACTTCCCGAGTTATTTTTTTCCGAGTTATTTTTCATGTGAC
CTCATAAATCACAAAATATGGTAAGTTTTGTTTTCTAGCTTTTAACTTTT
CGAGTTATTTGGTGTTTTTTAACTCAGTTTTTTTTTCGTGCCTTTAACTT
TTTGAGTTATTAGATAAATTTTAACTAGGGTTTTTTTCTTGGCCTCGATT
TATGGAAAATTCGACTATGGGTTTGTTTCGTGAAGGGACAGATTTGTGTT
AAATATATCAACAAAAAACTCGAAAAGTTAGAACAAAACCGAGTATGCGT
ATTGGAAGTGAAAAGAAAAGGAGATTGTACAAAAATTTTATTTCTCGCTT
ACCAGACCCCTTTTTTGAACGAGGTCTTGTTTTTTTACCGCATATGAAAA
TGCACGAGAGGCGTGCTCAAGAGGAGAAGGAACCTAAAAAGTGTATTTTA
CTTCATAGCTACAATTTGAAGATGCATATGAAAATGCACGAGAGGCGTGC
TCAAGAGGAGAAGGAACCTAAAAAAACAAAGATGTGGAACTGTAAGGAAT
GCGAGGCGGGTTTCACGCGCAAAGAAGACTTGAATTCTCACAAGAAGGAA
GATCATAAAACACCACATCAACTCATGTTAGAAGAACGCAAACTAAAGAG
AAAAGCTGAAGAAAAAGAAAAAGCAGGTATCTAGTCTAGGCTAGTTTTTT
TTTTTCTTTAAACAGACCTGATTTACAGTTTACGCTCTTTAATTTGATTT
TCAAGGGGAATAGCATTTTCATCGAATAAGGGTAAGGGAGGGTATTGAAG
TGTAGAGCTTTGTCTGTAAGAGTTTCTTGTTGACGGTGACTTTCAATATG
ATCGAATAAGGGAGCGTATCGAATAGTAGAGCGTCGTTTATGAGAGTTTC
TTGTTGACGGTGACTTTCAATATGATCGAATAAAAGAGCGTATTGAATAG
TGCAACGTCGAATTAGAGAGCGTCGATCGTCGTTGACGGGGGGGGGGGGG
TCCAAAANTCCTTCACTCTGTTTTAAAAAGGGTTGTACGCGCTCCAGAAC
TCTCACGTCCCTTCACTCTGTTTTAAAAAGGGTTGTACGCGCTCCAGAAC
TCTCACGTTCCTTCACTCAGTTTTAAAAAGGGTTGTACGCGCTCCAGAAC
TCTCACGTTCCTTCACTCTGTTTTAAAAAGGGTTGTACGCGCTTCAGAAC
TCTCACGTTCCTTCACTCTGTTTTAAAAAGGGTTGTACGCGCTCCAGAAC
TCTCACGTTCCTTCACTCTGTTTTAAAAAGGGTTGTACGCGCTCCAGAAC
TCTCACGTTCCTTCACTCAGTTTACAAAGCAAAGAGAGAGACAAAAGTCA
ACAATCGTGTACAAAATGAACAGTAAATCTTTCATTATTCGTTGAGCTCG
GTAAATATGTTGATCTATTATTATTCTCTGATTATGTTTTTCTTCTCTTT
GCATTCATAGTAAATGAGGATGGTGTATCAGCCGCCAAGAAACGAACTTT
GAGAACAACCGGCTTCACCCAAAAAGAAGGTCAGTTTGCCCGTCATAATA
GTATTGATTCTCATTTTTTTTAAGAGATAAAATAAACTCTTGGATGGAAG
ATGAAGCCATTTATTCCCTATTTGACTGGTTTTCACAAAAACACCGGATT
GAAAATAAAATATGTCGCCATATTTCAAAAATAGGAAAACTAAGAAAGCG
CGTCGTTTTTAATCTGTCATTCTAAATAAGGCGTATATCTTATGTTTTTA
CTTTTTCTTGCTTGAGAAAGAGTTAAGATTCCAATCTACCCCATTAAACT
CTATGATTGCTTCGGCCCACTGTAAGATTATAATAAGGTCCTCCAAATAA
ACGAAATCTGCGTGGAAAAGATGCTACTAAGCTCAGCTACGGGGGGGGGG
GGGGGGGAAAAAGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAGTAAATCTTTCATTATTC
GTTGAGCTCGGTAAATATGTTGATCTATTATTAGTCTCTGATTATGTTTT
TCTTCTCTTTGCATTCATAGTAAATGAGGATGGTGTATCAGCCGCCAAGA
AACGAACATTGAGAACAACCGGCTTCACCCAAAAAGAAGGTCAGTTTGCC
CGTCGGTAGGCAAAAATGGGTGCTGGGTATGTGCGGACGATAAGGGTCGG
TTTTTTTACCTTCCAAAGTCTCTCTAAGGTTTACAAAAACCAGAAAATTT
CAAAGTAATCCCTCTAAGGGTCGGAAAATTAACTATTTTTAGGAAACTTT
TTGATGAGAGAAAAAATTGTAAGAAAGTCTCCCTAAGGGTAAGACATTTT
TCCAAAAAGTCTCTTCAGGCACTTTTTCGATAGAAATTAGAAACTAGTTC
TATCTAAGGGTCGGTTTTCGGAGGTCCCGTCGGCACATATTCCTCATCCG
CCAACCCTAGTACCCCCCCCCTTTAAACAAACAACACAACACAAACACAT
CTCAGATTATCCAAATTCTCCAAATTTCCGAATCTCTTTTATAGATGGCA
CATATGTTTGCGATTTATGTCAAAAAGAATTCGTAAAGAAGGATTACCTG
AACCGTCATTTAAGACGTCACGAATCAAGCACCGCTACGGATTGCGGAGA
ATGCGGGAAGACGTACCGAGATAAACCAACTATGCGACAACACATGGTTG
ATGCGCACGGAAGCGAAGCGAAACACTATTGCAATATATGTAAGCAAGGC
TTTGTTATTTTGTCAACCTTACAACGTCACATGCGGATCCATCTCGATTC
ACGTCCGTTTACTTGCGATCAATGTCCGGGTACTTACAAATCGAAAGAGG
ATTTAAGGCGCCATAAGCGGACCCACGAGGCCGACCGCCCGTACAAATGC
GATATTTGTCATAATGGATTTGTTGATAAATCAGGGCTGAACCGTCATAT
GCGGATTCATACCGGTGAAAAACCATTCACGTGTCCGGATTGCGGGCAGT
CGTTTACTCAATGTGGAACCATGAAACTCCACCGTGCTAAGAGACATCCC
AATAGCACTATCGAGCTTACGGACCTTCGTTCCGGTGCACGAATTGCCGC
CGAGATGACGACGAAAACCGCCACTGATGAAGACACTCCGAAAATTCCCG
AAAAATCTGACCCTGATGAAGAAGTCACAGAGTCGGAAGACGAAACTGCT
CCTACCACGGAAAACTCCAAGTTTAGTACGGTTCAAGAACTCTTGAATTG
GATTGGTCAAAATCAGAATTCAGAACAGAATACGTCATACGAAATGTAGT
GTGACTTGATTCTGAAAAGGTACAACAACTGTGTATTGTTTAGATTCAGA
NTTCATACGAAATGTAGTGAGACTTGATTCTGAAAAGGTACAATAATTGT
GTATGGTTTAGATTCAGAGATTACCAATTTCCCATCATTTTTCCATTTTG
TGCAGACGAACGATTGAATGAGCTTGATACTCTGGAAATGACTCGGAAAA
TGTTTTTCGAGGAATGAGACATTTTCATTCGTATGTGTATCAGATATTCT
CTCTACATTTTTTAGGCGTACAAACTTTCGCTAGGTCGAGAAATCGCGAA
ATTTACGAAAATTTATTTTCGTGAATTGGGCGAAAAATGTTCTTTCAATC
AAGAAAAGTTTCACACGAAAAAATGGCTTAGAGTGACAAACATTTCTTGA
ATTGAAAGTAAAACTTCCTTATTATGAGGATTAAGCAGGTTAAAGAGCGC
CATAAATGTTACATTTTATTTTAAGTTAGAAGTTTATAGATTTTCTATTT
TGTTTAGATATTTCGCGAGCATCATAAACTTTTGCGAATGGCCTTTTAAG
AATTTTAGAGACATTTACTTTCGCGAAAAGAGCTAAAATTCGCGAAAATT
GCGAAAGTTTCTGTTCGCGAAAGTTTGTACGTACGCCTGAAGTAAGCCCA
ACGACCATATTTCATACAGAAAATATTCATCTTTCTTGATGTATGATAAA
GTCTTTTACTATGTTATCAAATCAGGTGTCAGTAAAATTACAAAGACGCG
AATAACCATTGATACAGTTTGGTAAGATGGCGATCAAATTCGAAATTGAA
GAAGATGTTATTAATGACGGCTTCTTTGAAAAGGACTAGTAAATTGTCTA
AACTTTCATAGGTACTTTTTATTGATTTATTTGTAATGATTAGTTACATG
TTTGGACCAAAAAGGACGGTGGCCCATAATGCTCACGGCGTACTTCCAGT
TCTGACACACCTCTAGGCTGCTGGCATCCACTAACGGATTCGTGTTCCTT
ATACCTGGGGTTTTGTAGAGGTCTGCGATTCAGACTAACACACTTCCAGT
TCACAAATTTTACAAGTGCTGGAAGTGTCTTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005448XLOC_005448Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009750-exon-sc0000098-1575043694:432643..432676TCONS_00009750-exon-sc0000098-1575043694:432643..432676Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1575043694:428496..428567TCONS_00009750-exon-sc0000098-1575043694:428496..428567Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1575043694:426480..426671TCONS_00009750-exon-sc0000098-1575043694:426480..426671Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1575043694:425718..425850TCONS_00009750-exon-sc0000098-1575043694:425718..425850Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1575043694:424901..425118TCONS_00009750-exon-sc0000098-1575043694:424901..425118Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1575043694:424048..424116TCONS_00009750-exon-sc0000098-1575043694:424048..424116Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1575043694:420442..422282TCONS_00009750-exon-sc0000098-1575043694:420442..422282Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1510915933:432643..432676TCONS_00009750-exon-sc0000098-1510915933:432643..432676Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1510915933:428496..428567TCONS_00009750-exon-sc0000098-1510915933:428496..428567Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1510915933:426480..426671TCONS_00009750-exon-sc0000098-1510915933:426480..426671Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1510915933:425718..425850TCONS_00009750-exon-sc0000098-1510915933:425718..425850Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1510915933:424901..425118TCONS_00009750-exon-sc0000098-1510915933:424901..425118Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1510915933:424048..424116TCONS_00009750-exon-sc0000098-1510915933:424048..424116Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1510915933:420442..422282TCONS_00009750-exon-sc0000098-1510915933:420442..422282Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1491911889:432643..432676TCONS_00009750-exon-sc0000098-1491911889:432643..432676Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1491911889:428496..428567TCONS_00009750-exon-sc0000098-1491911889:428496..428567Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1491911889:426480..426671TCONS_00009750-exon-sc0000098-1491911889:426480..426671Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1491911889:425718..425850TCONS_00009750-exon-sc0000098-1491911889:425718..425850Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1491911889:424901..425118TCONS_00009750-exon-sc0000098-1491911889:424901..425118Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1491911889:424048..424116TCONS_00009750-exon-sc0000098-1491911889:424048..424116Clytia hemisphaericaexon
TCONS_00009750-exon-sc0000098-1491911889:420442..422282TCONS_00009750-exon-sc0000098-1491911889:420442..422282Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098supercontigsc0000098:420442..432676 -
Expression
No biomaterial libraries express this feature.
Blast
[Close]
BLAST of TCONS_00009750 vs. Swiss-Prot (Human)
Match: ZN112 (Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.127e-56
Identity = 120/373 (32.17%), Postives = 181/373 (48.53%), Query Frame = 1 
Query:   94 SRLGVPQNQYHDYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREHYNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKK-EDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCDICHNGFVDKSGLNRHMRIHTGEKPFTCPDCGQSFTQCGTMKLHR 1209
            S L V Q + H   + + C  CD+ F   S L+AH   H       C  C K FS+ S L+ H R HTGE+PYKC +CGK F  S  L  H ++H G     C+ CGK F   +NL++H ++H             K + C+EC  GF++   L +H++    + P+Q                   +E G S +++  L++       +  Y+C++C K F ++ YL  H R H       C  CGK +     +  H    H     + C +C +GF   S LQ H R+H++ RP+ C+QC   +     L+ H R H  ++PYKC++C  GF  +S L  H R+HTGEKP+ C  CG+ F     + +H+
Sbjct:  538 SVLNVHQ-RVHTGEKPYKCEECDKGFSRSSYLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQRVHTGEKPYKCEECGKGFSRSSHLQGHQRVHTGEKPFKCEECGKGFSWSFNLQIHQRVH----------TGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQ------------------CDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVHTRVKPYKCEMCGKGFSQSSRLEAHR-RVHTGGKPYKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCGKGFSGYSSLQAHHRVHTGEKPYKCEVCGKGFSQRSNLQAHQRVHTGEKPYKCDACGKGFRWSSGLLIHQ 880

HSP 2 Score: 139.043 bits (349), Expect = 1.611e-33
Identity = 90/318 (28.30%), Postives = 134/318 (42.14%), Query Frame = 1 
Query:  124 HDYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREHYNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKKEDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCD 1077
            H   + F C  C + F     L+ H   H       C  C K FSK S+L  H R HTGE+PY+C++CGK+F     L SH  +H+G   + C++CGK F +   L+ H ++H R           K + C+ C  GF++   L +H                                       R + T G        Y C++C K F +   L  H R H       C +CGK +    +++ H    H  E  + C +C +GF   S LQ H R+H   +P+ CD C   ++    L  H+R H +D+ YK +
Sbjct:  631 HTGEKPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQCDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVHTR----------VKPYKCEMCGKGFSQSSRLEAH---------------------------------------RRVHTGG------KPYKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCGKGFSGYSSLQAHH-RVHTGEKPYKCEVCGKGFSQRSNLQAHQRVHTGEKPYKCDACGKGFRWSSGLLIHQRVHSSDKFYKSE 892

HSP 3 Score: 136.732 bits (343), Expect = 8.021e-33
Identity = 103/365 (28.22%), Postives = 148/365 (40.55%), Query Frame = 1 
Query:  127 DYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREH---YNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKKEDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCDICHNGFVDKSGLNRHMRIHTGEKPFTCPDCGQSFTQCGTMKLHRA 1212
            +Y + FIC          S L      H+E        C   FS  S  ++    HT E+PYK   C  +F  +  L  H KIH G          K  +EH   +N    +K H+R    +K       + C  C  GF  +  LN H++                               V   +K               Y C+ C K F +  YL  H R H       C ECGK +     ++ H    H  E  + C  C +GF   S LQ H R+H   +PF C++C   +    +L+ H+R H  ++PYKC+ C  GF   S L  H R+HTGEKP+ C +CG+SF+Q   ++ H++
Sbjct:  419 EYGKSFICS---------SNLDIQHRVHMEENSYNSEECGNGFSLASHFQDLQIVHTKEQPYKRYVCSNSFSHNLYLQGHPKIHIG---------EKPRKEHGNGFNWSSKLKDHQRVHTGQKP------YKCNICGKGFNHRSVLNVHQR-------------------------------VHTGEK--------------PYKCEECDKGFSRSSYLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQ-RVHTGEKPYKCEECGKGFSRSSHLQGHQRVHTGEKPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQCDECGKSFSQRSYLQSHQS 713
The following BLAST results are available for this feature:
BLAST of TCONS_00009750 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN1121.127e-5632.17Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 ... [more]
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