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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009727 ID=TCONS_00009727|Name=TCONS_00009727|organism=Clytia hemisphaerica|type=transcript|length=710bp
CTTAAAAGgataaaactaaaatctataTCATTCTTCTCCctaaaaaataa
agattatTAAAAGCATAttgagaaaataatattttgaaaaagatatcTTA
TTTTTTGGTACAAATTCAGTTTGCGctcactgaaagaaaaattcaagaaa
gaaaaataaaactcaaataaaaatattataaagtATATAGTTATAAAAGC
AATACATCAAAACCACCCAGTATTCACTTTAGGACTCTCTAAAATACAAA
AACACTATTTTGCACACAAGAAAAAATACatctttttatataaatatatA
CAAATTTTTACAGAATCTGGGCATTTCCTATTTTCTAGGAAAAAAGTAGT
GGGAATTGCTCCATTTACGGATGGGCCCAACCTCGTACAAATTGTCTGAT
TCGTacgttttttatgaTTTTGATGGTTTTCAGAATCGTCTAAATTCTAT
CGGTTCTATCACATAAGCCTTTCAAAAACGGACAGCAATAGGTGATACGT
TGGTATGTTCGGACGGCAAAAACCatgaaaagcaaaaaaatctcTTTGTG
AGGTTATGAGGTTAGGAATTTTCTTAAGAATTATCTCTCTAAAGATCACT
TTTCGCCGATTTTGTCTCTCTAAGAGTAACGTTTTCGCAAAGATTTTGAT
TCTCTCAGAATAACCTTTTCGCAAAGATTTAGTTTCTCTAAAGGTCAGTT
CCCAGAGGTC Run BLAST on NCBI transcript from alignment at sc0000098:33908..34984- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009727 ID=TCONS_00009727|Name=TCONS_00009727|organism=Clytia hemisphaerica|type=transcript|length=1077bp|location=Sequence derived from alignment at sc0000098:33908..34984- (Clytia hemisphaerica)
CTTAAAAGGATAAAACTAAAATCTATATCATTCTTCTCCCTAAAAAATAA
AGATTATTAAAAGCATATTGAGAAAATAATATTTTGAAAAAGATATCTTA
TTTTTTGGTACAAATTCAGTTTGCGCTCACTGAAAGAAAAATTCAAGAAA
GAAAAATAAAACTCAAATAAAAATATTATAAAGTATATAGTTATAAAAGC
AATACATCAAAACCACCCAGTATTCACTTTAGGACTCTCTAAAATACAAA
AACACTATTTTGCACACAAGAAAAAATACATCTTTTTATATAAATATATA
CAAATTTTTACAGAATCTGGGCATTTCCTATTTTCTAGGAAAAAAGTAGT
GGGAATTGCTCCATTTACGGATGGGCCCAACCTCGTACAAATTGTCTGAT
TCGTACGTTTTTATGATTTTGATAGACTGGAGTCGTTTATAATGCGTGTA
ATACTAATAATACTAATAATAATATGGGATTTAGTATGTATAAACGACTG
GAAGAATCCGGCGTTCCAGCCTTATAGATACCCCGGCTAGCTACGCAGAA
ACTTGCGTAGCGAGAAAACAATTTATCAAGCATCAACAAACTCTCAAAAC
GAAATCAACTCAAATGAAAAACTTTCATTTTGAGCAGGAAAAAATTATAA
TTGCAATCTTGACACTTTTCTTTTGTTTGGAGTTAGTGCACAAAGGTTTC
TAGACGACTAAAATTGTTCCATTCATTACTTTTTGCTTTATTTCTACTAT
GTATAAATTAGTCGTCTAGCTTGCTAGACTATGATTTTGATGGTTTTCAG
AATCGTCTAAATTCTATCGGTTCTATCACATAAGCCTTTCAAAAACGGAC
AGCAATAGGTGATACGTTGGTATGTTCGGACGGCAAAAACCATGAAAAGC
AAAAAAATCTCTTTGTGAGGTTATGAGGTTAGGAATTTTCTTAAGAATTA
TCTCTCTAAAGATCACTTTTCGCCGATTTTGTCTCTCTAAGAGTAACGTT
TTCGCAAAGATTTTGATTCTCTCAGAATAACCTTTTCGCAAAGATTTAGT
TTCTCTAAAGGTCAGTTCCCAGAGGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009727-exon-sc0000098-1575043694:34573..34984 | TCONS_00009727-exon-sc0000098-1575043694:34573..34984 | Clytia hemisphaerica | exon |
| TCONS_00009727-exon-sc0000098-1575043694:33908..34205 | TCONS_00009727-exon-sc0000098-1575043694:33908..34205 | Clytia hemisphaerica | exon |
| TCONS_00009727-exon-sc0000098-1510915933:34573..34984 | TCONS_00009727-exon-sc0000098-1510915933:34573..34984 | Clytia hemisphaerica | exon |
| TCONS_00009727-exon-sc0000098-1510915933:33908..34205 | TCONS_00009727-exon-sc0000098-1510915933:33908..34205 | Clytia hemisphaerica | exon |
| TCONS_00009727-exon-sc0000098-1491911889:34573..34984 | TCONS_00009727-exon-sc0000098-1491911889:34573..34984 | Clytia hemisphaerica | exon |
| TCONS_00009727-exon-sc0000098-1491911889:33908..34205 | TCONS_00009727-exon-sc0000098-1491911889:33908..34205 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098 | supercontig | sc0000098:33908..34984 - |
Blast
The following BLAST results are available for this feature:
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