|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009723 ID=TCONS_00009723|Name=TCONS_00009723|organism=Clytia hemisphaerica|type=transcript|length=1329bp TCAGCAATTACAGAAAGAATGTGGttataataaaaaattgaaattaatca GATTCCTTCTTTGAAATGGCAgatgaaaaagatgaagaaaagaTGCCAGA CTGCTTTCAAAATGGATGCGTATCTTTTATTGGTCAAAACGTGAAATGTA TACCAAACTGGCTGTCAAGTAAATATGGCTCCAAAACAATACGTGCAGAT TTCAGCTACAACAATTTGAAGAGTGTGAAGGGACTTGTTGGTTTTGATGT ACTGAAAGAATTGGTGCTTGACAACAACTGTCTGACCGACGATGTTCAAT TCCCAAAGCTGGAATCACTAGAAACATTAACTGCTAATAAAAACAATATT CAAAATTTAGAATTATTTATGGCCCACATTGTAGAAACCTTACCCAATTT AACTTATTTATCATTGCTTGGGAATACAGCGTGTCCGAATCAATTATCAA ACCTTGACAATGATGAAGAAGATTATCAACGATACAGATATTACGTATTG TACATGATGCCAAATCTGAAGTTTTTGGATTCGACACCAGTCTCTTCATC AGAACGAAAAGAAGCTTTGAGGATTGGTGCCTTCACTAAAGTCGTTTCAG CTGATACCTTTGAAGATaTCGACGAAGAAAATTCATCATCCGCAAACGAA GGTTACACGCCTCTCCCTTCATCATCTACAATGAACGGTGAAGATGACCA TAAAAGTACTTTTGGGAAATGCCGGTATATTTATTATGGAAAACATTCTG AAGGGAACAGATTCATTGCTAATAACGATTTATAATATCTTTGGTTACTA CAAATGATTACTTGAAACAAACACCTTTGGCAATGTTTTAATTCCTATCA CCGTCGTTTGACATCGCTCCCTGGACAAAGAATCCACCTTTGGTTATTGC TTTCTTTACTACATCTGCACCTTATTAGATAAGAATTTATGTTATATAGT CTGACAAGTAGTAGTTTGGCATTTGTTCATGACTCAAATGCATCTTGTAT TTTCTTTGACTCAGTGAGAATATTTTAGCAAGTGAGGCTAAAATGAACGA GCTAAATACCAATACCCgagggggcactcaaggtaaacgagcTACCGTAC GTGCGCCCCTTAAGGGTCCcccttttccaagcttcccaaagtgcactgta agggtcgaaatgagcaaagttGAGAAAAAGTGCGCTCtaataattttcaa gaaaacgcaccgtaagggtcgattCTTCatccaaatttactcaaatttgg ttaaattttctctgcactgtaagatttcaaaggcctaattttgggctgcA TGTATAGTCGTTTttaaatcgagtgcccc Run BLAST on NCBI protein sequence of TCONS_00009723-protein >TCONS_00009723-protein ID=TCONS_00009723-protein|Name=TCONS_00009723-protein|organism=Clytia hemisphaerica|type=polypeptide|length=239bp
MADEKDEEKMPDCFQNGCVSFIGQNVKCIPNWLSSKYGSKTIRADFSYNN LKSVKGLVGFDVLKELVLDNNCLTDDVQFPKLESLETLTANKNNIQNLEL FMAHIVETLPNLTYLSLLGNTACPNQLSNLDNDEEDYQRYRYYVLYMMPN LKFLDSTPVSSSERKEALRIGAFTKVVSADTFEDIDEENSSSANEGYTPL PSSSTMNGEDDHKSTFGKCRYIYYGKHSEGNRFIANNDL Run BLAST on NCBI transcript from alignment at sc0000098:573813..577805+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009723 ID=TCONS_00009723|Name=TCONS_00009723|organism=Clytia hemisphaerica|type=transcript|length=3993bp|location=Sequence derived from alignment at sc0000098:573813..577805+ (Clytia hemisphaerica) TCAGCAATTACAGAAAGAATGTGGttataataaaaaattgaaattaatca
GATTCCTTCTTTGAAATGGCAgatgaaaaagatgaagaaaagaTGCCAGA
CTGCTTTCAAAATGGATGCGTATGtagaaattgttttttaaaactACTAT
CATCATTTTTATCTACACATCTTTAAGCAGAGCTTCCAGCATGGGAGGGA
CAAAATGTTGGCACTGGGTGGATTGGTACCTCAAAGTCAGTAGGGTCCCG
ctttcaaattatagaaatatttattttcttgattgttttttatttaacat
tAATCCTGGTTTCATTAAATTAATGCTTTGACCCTTATCTATAATAAATA
AtatgataaaatttaaaataaaactcatagtattattattttaacaataA
ACCTAGATTTGATCAGAGCTCGGAAGATCTATAGGTTTTATATTACTTGT
TATACTAGAGTAGCTTAATGTTGGGATCTGAGTTTGATATGACGTaaatt
acttttgaaaatttaataaattGCAATGTATATTGTAGGATCTCAAAATg
acaaaacttaaaaaatgcAGTGCTTTCTCACTGTACTCGACGAACTACTT
TCTTctatatttcttttaaaatttttctgtcTAAGGTATCTTTTATTGGT
CAAAACGTGAAATGTATACCAAACTGGCTGTCAAGTAAATATGGCTCCAA
AACAATACGTGCAGATTTCAGCTACAACAATTTGAAGTACCACAATTAAT
TTTTATTCGTCCTTTTCTCGTCTTTGACTTTCtgtattggtatatatttt
tgaGGCAACTTATTTTCTCGACTTGACTACTGATAGTTATTTACATACTA
GTATTTAAAACAGTCCGAATGAAGAACTGAATTCAACATATCAATTCTTG
AAATTGCCTTAGAGCACCCCTTCTCACATACCGGTAGAgttttttcagcc
agttggggtaaaaataacggatgaATGCTCATTGGgtattgatattccca
tgttttttatggcttggAATTTGAATCTGATGTTTTCAGTCAGAAAACTC
AGTGGGGGGatgaaaaaaatagcacaatattttgcagtgaggatttgttt
atttgattattttcagtgggaacaAAAATTGGATCATAATTTTGTACTGG
GACAATATTTTGGACAAATCTTTCAGTTGGAAGGGGTCCCTCTGGGAGTT
TTTTAGAGAGCATTCTAAACGTTCAAGTCTTATTATTCTTTTTTGTGTTT
GCAGGAGTGTGAAGGGACTTGTTGGTTTTGATGTACTGAAAGAATTGGTG
CTTGACAACAACTGTCTGACCGACGATGTTCAATTCCCAAAGCTGGAATC
ACTAGAAACATTAACTGCTAATAAAAACAATGTATCTTTTCAACCTTTCA
ATAAAATCATAGCCAGATATGATATACAACCAATACATGAATTGTATCCA
TTTTTATTGTTAGGAAATCACAAAATATTTTACTGCGATATTACGCCCAA
ATTATTCTctcatcacgccatcacgccatcacgccaaaaaattATCTTAT
CAATCACGTATCACGTTTTTTGAAATCATAAATAAAGTCATCATGCCAAA
AattcccaatcacgccatcacttAAACCGCTCTTAATCATTAAACGGAAT
TCACTGTTTCCTGGTGATTTTTGACACCTCGTTAATTCTCTTCATCTTTG
GTGGTGTTACTAGTTTTGCGAAGTTacaggtatgtccgagccaaagttcg
aaaatcgactcTTAGAGAAACTGAgacttttgatgtttttgcgaCCCTGT
GAGAGcctattttccaaatttttaatcACGAGAATTTACGACCCTGCGAG
AGAGTCGTACTTTTGGTATTCTGTTAGAGACTCTAATgcagttttttggt
ttttgtagCCCTGtcagagactttcgagggtgtgggAAAAGGGAACCTTA
TTGCTTGCACATATATTTTGCCTAAGTATTTCCTTAACTGTTAATCATCA
TTTTCAGATTCAAAATTTAGAATTATTTATGGCCCACATTGTAGAAACCT
TACCCAATTTAACTTATTTATCATTGCTTGGGAATACAGCGTGTCCGAAT
CAATTATCAAACCTTGACAATGATGAAGAAGATTATCAACGATACAGGTT
CCAATACTCTGATAAAATggtctttttcttttcaaattataGTTCACATC
CAAAAGGATATCaacatttcaacaaaaaaacctCTGACCCAAACCAACCA
GTTTTAAGGAGTATCCAATGGTATACGGAATGATCTTAACGTGGCTTaca
tccttttttgtttttgataggaGAGGGGAAAACTTTTCTTGGGGCCTTTG
TATAGGGTGGGTACCAAGATTTGCCAAAAGAAAACTGGAGCGGGGATGTA
GGGGGAGGTCAAATAGGTAAGTTTGCAActgcagtcgagggcgacccaaa
ggctcccTTTCCTCAAGCTGTCTGCCCGAAGGTAgtggagggcgccactc
ctttccctggattgcccagggggggggtcaaatgAAAAGGGAGAATGATA
GAGAATTGACAGTATTTACAGAATATCCTATAACATTTTGTCTCCCTTTC
TTTCTAGATATTACGTATTGTACATGATGCCAAATCTGAAGTTTTTGGAT
TCGACACCAGTCTCTTCATCAGAACGAAAAGAAGCTTTGAGGATTGGTGC
CTTCACTAAAGTCGTTTCAGCTGATACCTTTGAAGATGTAAGATCGTATA
TTCGGAGTAGCGGAATGTCCTGTGTTGTTCCTAAACACCCCTTGTCTCAG
AGAACTTTTCACTAAAGCGGAGATTCACCACGGAATTTTATCTGAAGTGC
AATTGGGAGAGaaactctattgttccaagctaaAAAATCCAGTGCGGAGT
CCAATtttaacattgaatttcaaatggggatgaaatcaaaataaatttcc
cagtggggctgaaattgtaggatatttttccacctgggacgaaattttgg
ctaaGGGAACCAGTGGGCCAGagattccaccggggctgtaagAAAGAAAA
CAACATTACATAACCAACTCCAGGGGAAGTTTGAATTTGCCTCTTTTGCT
GGTCTTGTTAAATAAGAGAACTAAAATTATCGCTAAATGCTGTCACAGAC
GGTAATTTCTCTTCGAGAACAACAAGTTTTCTGACTACTTTAATTCACAA
TGACAATAGGCATGGTGAAAACAGGACCGTCTAAATTAGAGCCGTCTTGT
TTTCtttcttaacattttcattctttttcagaTCGACGAAGAAAATTCAT
CATCCGCAAACGAAGGTTACACGCCTCTCCCTTCATCATCTACAATGAAC
GGTGAAGATGACCATAAAAGTACTTTTGGGAAATGCCGGTATATTTATTA
TGGAAAACATTCTGAAGGGAACAGATTCATTGCTAATAACGATTTATAAT
ATCTTTGGTTACTACAAATGATTACTTGAAACAAACACCTTTGGCAATGT
TTTAATTCCTATCACCGTCGTTTGACATCGCTCCCTGGACAAAGAATCCA
CCTTTGGTTATTGCTTTCTTTACTACATCTGCACCTTATTAGATAAGAAT
TTATGTTATATAGTCTGACAAGTAGTAGTTTGGCATTTGTTCATGACTCA
AATGCATCTTGTATTTTCTTTGACTCAGTGAGAATATTTTAGCAAGTGAG
GCTAAAATGAACGAGCTAAATACCAATACCCgagggggcactcaaggtaa
acgagcTACCGTACGTGCGCCCCTTAAGGGTCCcccttttccaagcttcc
caaagtgcactgtaagggtcgaaatgagcaaagttGAGAAAAAGTGCGCT
CtaataattttcaagaaaacgcaccgtaagggtcgattCTTCatccaaat
ttactcaaatttggttaaattttctctgcactgtaagatttcaaaggcct
aattttgggctgcATGTATAGTCGTTTttaaatcgagtgcccc Coding sequence (CDS) from alignment at sc0000098:573813..577805+ >TCONS_00009723 ID=TCONS_00009723|Name=TCONS_00009723|organism=Clytia hemisphaerica|type=CDS|length=4320bp|location=Sequence derived from alignment at sc0000098:573813..577805+ (Clytia hemisphaerica) ATGGCAgatgaaaaagatgaagaaaagaTGCCAGACTGCTTTCAAAATGG ATGCGTATCTTTTATTGGTCAAAACGTGAAATGTATACCAAACTGGCTGT CAAGTAAATATGGCTCCAAAACAATACGTGCAGATTTCAGCTACAACAAT TTGAAGAGTGTGAAGGGACTTGTTGGTTTTGATGTACTGAAAGAATTGGT GCTTGACAACAACTGTCTGACCGACGATGTTCAATTCCCAAAGCTGGAAT CACTAGAAACATTAACTGCTAATAAAAACAATATTCAAAATTTAGAATTA TTTATGGCCCACATTGTAGAAACCTTACCCAATTTAACTTATTTATCATT GCTTGGGAATACAGCGTGTCCGAATCAATTATCAAACCTTGACAATGATG AAGAAGATTATCAACGATACAGATATTACGTATTGTACATGATGCCAAAT CTGAAGTTTTTGGATTCGACACCAGTCTCTTCATCAGAACGAAAAGAAGC TTTGAGGATTGGTGCCTTCACTAAAGTCGTTTCAGCTGATACCTTTGAAG ATaTCGACGAAGAAAATTCATCATCCGCAAACGAAGGTTACACGCCTCTC CCTTCATCATCTACAATGAACGGTGAAGATGACCATAAAAGTACTTTTGG GAAATGCCGGTATATTTATTATGGAAAACATTCTGAAGGGAACAGATTCA TTGCTAATAACGATTTATAAATGGCAgatgaaaaagatgaagaaaagaTG CCAGACTGCTTTCAAAATGGATGCGTATCTTTTATTGGTCAAAACGTGAA ATGTATACCAAACTGGCTGTCAAGTAAATATGGCTCCAAAACAATACGTG CAGATTTCAGCTACAACAATTTGAAGAGTGTGAAGGGACTTGTTGGTTTT GATGTACTGAAAGAATTGGTGCTTGACAACAACTGTCTGACCGACGATGT TCAATTCCCAAAGCTGGAATCACTAGAAACATTAACTGCTAATAAAAACA ATATTCAAAATTTAGAATTATTTATGGCCCACATTGTAGAAACCTTACCC AATTTAACTTATTTATCATTGCTTGGGAATACAGCGTGTCCGAATCAATT ATCAAACCTTGACAATGATGAAGAAGATTATCAACGATACAGATATTACG TATTGTACATGATGCCAAATCTGAAGTTTTTGGATTCGACACCAGTCTCT TCATCAGAACGAAAAGAAGCTTTGAGGATTGGTGCCTTCACTAAAGTCGT TTCAGCTGATACCTTTGAAGATaTCGACGAAGAAAATTCATCATCCGCAA ACGAAGGTTACACGCCTCTCCCTTCATCATCTACAATGAACGGTGAAGAT GACCATAAAAGTACTTTTGGGAAATGCCGGTATATTTATTATGGAAAACA TTCTGAAGGGAACAGATTCATTGCTAATAACGATTTATAAATGGCAgatg aaaaagatgaagaaaagaTGCCAGACTGCTTTCAAAATGGATGCGTATCT TTTATTGGTCAAAACGTGAAATGTATACCAAACTGGCTGTCAAGTAAATA TGGCTCCAAAACAATACGTGCAGATTTCAGCTACAACAATTTGAAGAGTG TGAAGGGACTTGTTGGTTTTGATGTACTGAAAGAATTGGTGCTTGACAAC AACTGTCTGACCGACGATGTTCAATTCCCAAAGCTGGAATCACTAGAAAC ATTAACTGCTAATAAAAACAATATTCAAAATTTAGAATTATTTATGGCCC ACATTGTAGAAACCTTACCCAATTTAACTTATTTATCATTGCTTGGGAAT ACAGCGTGTCCGAATCAATTATCAAACCTTGACAATGATGAAGAAGATTA TCAACGATACAGATATTACGTATTGTACATGATGCCAAATCTGAAGTTTT TGGATTCGACACCAGTCTCTTCATCAGAACGAAAAGAAGCTTTGAGGATT GGTGCCTTCACTAAAGTCGTTTCAGCTGATACCTTTGAAGATaTCGACGA AGAAAATTCATCATCCGCAAACGAAGGTTACACGCCTCTCCCTTCATCAT CTACAATGAACGGTGAAGATGACCATAAAAGTACTTTTGGGAAATGCCGG TATATTTATTATGGAAAACATTCTGAAGGGAACAGATTCATTGCTAATAA CGATTTATAAATGGCAgatgaaaaagatgaagaaaagaTGCCAGACTGCT TTCAAAATGGATGCGTATCTTTTATTGGTCAAAACGTGAAATGTATACCA AACTGGCTGTCAAGTAAATATGGCTCCAAAACAATACGTGCAGATTTCAG CTACAACAATTTGAAGAGTGTGAAGGGACTTGTTGGTTTTGATGTACTGA AAGAATTGGTGCTTGACAACAACTGTCTGACCGACGATGTTCAATTCCCA AAGCTGGAATCACTAGAAACATTAACTGCTAATAAAAACAATATTCAAAA TTTAGAATTATTTATGGCCCACATTGTAGAAACCTTACCCAATTTAACTT ATTTATCATTGCTTGGGAATACAGCGTGTCCGAATCAATTATCAAACCTT GACAATGATGAAGAAGATTATCAACGATACAGATATTACGTATTGTACAT GATGCCAAATCTGAAGTTTTTGGATTCGACACCAGTCTCTTCATCAGAAC GAAAAGAAGCTTTGAGGATTGGTGCCTTCACTAAAGTCGTTTCAGCTGAT ACCTTTGAAGATaTCGACGAAGAAAATTCATCATCCGCAAACGAAGGTTA CACGCCTCTCCCTTCATCATCTACAATGAACGGTGAAGATGACCATAAAA GTACTTTTGGGAAATGCCGGTATATTTATTATGGAAAACATTCTGAAGGG AACAGATTCATTGCTAATAACGATTTATAAATGGCAgatgaaaaagatga agaaaagaTGCCAGACTGCTTTCAAAATGGATGCGTATCTTTTATTGGTC AAAACGTGAAATGTATACCAAACTGGCTGTCAAGTAAATATGGCTCCAAA ACAATACGTGCAGATTTCAGCTACAACAATTTGAAGAGTGTGAAGGGACT TGTTGGTTTTGATGTACTGAAAGAATTGGTGCTTGACAACAACTGTCTGA CCGACGATGTTCAATTCCCAAAGCTGGAATCACTAGAAACATTAACTGCT AATAAAAACAATATTCAAAATTTAGAATTATTTATGGCCCACATTGTAGA AACCTTACCCAATTTAACTTATTTATCATTGCTTGGGAATACAGCGTGTC CGAATCAATTATCAAACCTTGACAATGATGAAGAAGATTATCAACGATAC AGATATTACGTATTGTACATGATGCCAAATCTGAAGTTTTTGGATTCGAC ACCAGTCTCTTCATCAGAACGAAAAGAAGCTTTGAGGATTGGTGCCTTCA CTAAAGTCGTTTCAGCTGATACCTTTGAAGATaTCGACGAAGAAAATTCA TCATCCGCAAACGAAGGTTACACGCCTCTCCCTTCATCATCTACAATGAA CGGTGAAGATGACCATAAAAGTACTTTTGGGAAATGCCGGTATATTTATT ATGGAAAACATTCTGAAGGGAACAGATTCATTGCTAATAACGATTTATAA ATGGCAgatgaaaaagatgaagaaaagaTGCCAGACTGCTTTCAAAATGG ATGCGTATCTTTTATTGGTCAAAACGTGAAATGTATACCAAACTGGCTGT CAAGTAAATATGGCTCCAAAACAATACGTGCAGATTTCAGCTACAACAAT TTGAAGAGTGTGAAGGGACTTGTTGGTTTTGATGTACTGAAAGAATTGGT GCTTGACAACAACTGTCTGACCGACGATGTTCAATTCCCAAAGCTGGAAT CACTAGAAACATTAACTGCTAATAAAAACAATATTCAAAATTTAGAATTA TTTATGGCCCACATTGTAGAAACCTTACCCAATTTAACTTATTTATCATT GCTTGGGAATACAGCGTGTCCGAATCAATTATCAAACCTTGACAATGATG AAGAAGATTATCAACGATACAGATATTACGTATTGTACATGATGCCAAAT CTGAAGTTTTTGGATTCGACACCAGTCTCTTCATCAGAACGAAAAGAAGC TTTGAGGATTGGTGCCTTCACTAAAGTCGTTTCAGCTGATACCTTTGAAG ATaTCGACGAAGAAAATTCATCATCCGCAAACGAAGGTTACACGCCTCTC CCTTCATCATCTACAATGAACGGTGAAGATGACCATAAAAGTACTTTTGG GAAATGCCGGTATATTTATTATGGAAAACATTCTGAAGGGAACAGATTCA TTGCTAATAACGATTTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00009723-exon-sc0000098-1491911889:573813..573931 | TCONS_00009723-exon-sc0000098-1491911889:573813..573931 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1510915933:573813..573931 | TCONS_00009723-exon-sc0000098-1510915933:573813..573931 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1575043694:573813..573931 | TCONS_00009723-exon-sc0000098-1575043694:573813..573931 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1491911889:574448..574548 | TCONS_00009723-exon-sc0000098-1491911889:574448..574548 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1510915933:574448..574548 | TCONS_00009723-exon-sc0000098-1510915933:574448..574548 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1575043694:574448..574548 | TCONS_00009723-exon-sc0000098-1575043694:574448..574548 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1491911889:575067..575193 | TCONS_00009723-exon-sc0000098-1491911889:575067..575193 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1510915933:575067..575193 | TCONS_00009723-exon-sc0000098-1510915933:575067..575193 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1575043694:575067..575193 | TCONS_00009723-exon-sc0000098-1575043694:575067..575193 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1491911889:575820..575959 | TCONS_00009723-exon-sc0000098-1491911889:575820..575959 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1510915933:575820..575959 | TCONS_00009723-exon-sc0000098-1510915933:575820..575959 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1575043694:575820..575959 | TCONS_00009723-exon-sc0000098-1575043694:575820..575959 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1491911889:576420..576549 | TCONS_00009723-exon-sc0000098-1491911889:576420..576549 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1510915933:576420..576549 | TCONS_00009723-exon-sc0000098-1510915933:576420..576549 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1575043694:576420..576549 | TCONS_00009723-exon-sc0000098-1575043694:576420..576549 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1491911889:577094..577805 | TCONS_00009723-exon-sc0000098-1491911889:577094..577805 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1510915933:577094..577805 | TCONS_00009723-exon-sc0000098-1510915933:577094..577805 | Clytia hemisphaerica | exon |
TCONS_00009723-exon-sc0000098-1575043694:577094..577805 | TCONS_00009723-exon-sc0000098-1575043694:577094..577805 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000098 | supercontig | sc0000098:573813..577805 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
Term | Definition |
IPR032675 | L_dom-like |
Blast
BLAST of TCONS_00009723 vs. Swiss-Prot (Human)
Match: LRMDA (Leucine-rich melanocyte differentiation-associated protein OS=Homo sapiens GN=LRMDA PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.126e-59 Identity = 101/191 (52.88%), Postives = 128/191 (67.02%), Query Frame = 3
Query: 210 NNLKSVKGLVGFDVLKELVLDNNCLTDDVQFPKLESLETLTANKNNIQNLELFMAHIVETLPNLTYLSLLGNTACPNQLSNLDNDEEDYQRYRYYVLYMMPNLKFLDSTPVSSSERKEALRIGAFTKVVSADTFEDIDEENSSSANEGYTPLPSSSTMNGEDDHKSTFGKCRYIYYGKHSEGNRFIANNDL 782
+N +S++GL F L+EL+LDNN L DD+ P L L TLT NKN I +LE + H+ E P L YLSLLGN ACPN+L +L+ DEEDY+RYR +VLY +PNLKFLD+ V+ ER+EAL G F KVV E+ +SS YTPLPS+S H+ GKCRY+YYGK+SEGNRFI ++ L
Sbjct: 13 SNKRSLEGLSAFRSLEELILDNNQLGDDLVLPGLPRLHTLTLNKNRITDLENLLDHLAEVTPALEYLSLLGNVACPNELVSLEKDEEDYKRYRCFVLYKLPNLKFLDAQKVTRQEREEALVRGVFMKVVKPKAS---SEDVASSPERHYTPLPSAS--RELTSHQGVLGKCRYVYYGKNSEGNRFIRDDQL 198
The following BLAST results are available for this feature:
|