TCONS_00009718 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009718
Unique NameTCONS_00009718
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2242

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009718 ID=TCONS_00009718|Name=TCONS_00009718|organism=Clytia hemisphaerica|type=transcript|length=2242bp
AGCACTTCGATGGGAGAAGAAAGAAGaGTTTGTACCAAAGAGAGGCCAAA
TCATTGGCTCCATAAGAGTAGCCAAGAAAGCATGGCGTATGTCAGTGGAT
ATCAAATACCTTGGTCCCGTAAATAACTGGGGAAGTATCATTCATTTTAC
TCGCGGTGGTAATTGCTGCGGAAGAGGACACAGGATTCCTGGTTTATGGC
TTTACGAGAACACGGCGAATGTCCACGTGACTAGTCAAGTTGGAAACAAT
GGAAACCAAGCACTGGATAAAGAGGGTGCCGACAAACTGAAAGAAAATGG
TCAATTTTCAACACTGGTTGTGGAACAAAAAAAGAGCACTGCTGACGGCT
TATATTATATCACTTACACCTTGGATGGtaaagaaattaataaaatgaaG
CAAACCCGCCCAGAAGACCATAGCTTGGTCACTATTTATGGTTCTGACCC
TTGGCACTTGGCCGCCGACGTCGTTGTCAAAAATTTGATCTTCGAAAATG
GAGTCGACCCAGATTGTAACCAAGTCTGTAACAAACCGATTGGTGATCCA
GCGTACAGCAGTATACCGCCAGaGACGTTCAAATTATACACCAACCAAGA
GACGGCGCCTACGAGAAGTAAAGTTGAGCGAACTCTTTCTGAATTAACAA
AGCAATGGAGGATTTCTTTGGATATCAAACAACTTGCCACGGTCAATGGT
TGGTCGAATATTTTGCATGCCACAACTGGTCATAATTGTTGCAACCCAGg
gCGTCGTGTTCCTGCTATTTGGTTCTTCAACCGTAATAACAGATTACATA
TTACATATCCAATTGGCAACCAAGGTAATACTCAATGCAACGAGATCTAT
GTGGATGAAGGCAAATTTAATAATATCGCTATTGAACAAAAAAAGGTTGG
TGATGAATATTGGTTGAAAGTTTTCAAAGATAATACTGAAGTGGAGAAAT
GCACAGTACAGCAATCTATACCGAGATCTTTTGCCAACGTCAAATATTAC
TTGAGTGACCCGTGGTACAATGCCGCTAATGCAGTTATCAAAAATgtcga
atttcaaaatttcgAACGATCGTATCCATGCGGTGACAAATGTAAAGGAA
TAAAGATTACTGACGTCATCAACGGAAAAACAGttGCTGGTTTCAATTTC
ACTTCTCAATACTGTAGCGATAAAGCCTTCGTTGTTATGGCAGACAATCT
TCCAGACTTTTCTCGATTAGCCTGTATGCGATTCTATTATCGAATTGAAA
AGGCTGCCAGTGGTAATGTACACCACTGCCACATCCACCGGTATGGTACA
GGACGAAGTCATCGATTAAACACAGTCAGTAATGAGTGGACCAAAGTGGA
AGAGACTTTACCCAAGAGGGCACATTGGGTTGGCGTGAGTGGTTATTTAC
GAGGCGCCCATTGTCCGACTGTCTCCATAGCTGGATTCTCAGTAACTGAA
GGGTCTTGCCAAAGTGAAGAATAATGAATGGAAAATGAAGCAGAAGGGAA
AATTAATGAAATGGAAACGGATCAGAACAAAGGAAACAAATTATTTGAAG
AAACCTTTTATTATGACTAGTACGCACATATATACTCTTATACATTATTA
ATTCCAATAAACGCCCCTGctcaaattctaaaaatttaataaacaccCGG
GACGTTCATTCAAAGTAATACGTNAATAAACGCCCCtgctaaaattctaa
aaatttaataaacaccCGGGACGTTCATTCAAAGTAATACGTTATAAGTT
TATTGGCACCCCTCATCTCCAAAGTGAGCCATAAGCCTAGGAGGGGAGAT
CCTTGTTTTGAGTATTCGAATGAATGTCACTACAGTGGAAACTCCCTAAC
TCGAATACCTCCTTAAATCGAACAGGTTTTCTTGTCCATTCAgctaacaa
tgccttataatctttactccatatctcgaaatctccttaactcgaacaaa
tttgtgttccctacgcgcgtgttcgagttatagagacgcCACTGTATTAT
TCGGATGGAACTTTCTTTGAAATTGAAgatttagtagggggaaatttgta
aaatcgctcgatttttttagtcaaagcacttgttatacatttttggaaag
ctaaggggtaggggaatcaaaataacttgggtgccaattttgtttcggac
actttggtgtgattttcggacaaatacgacggtctcgggcaaaaatcata
gggtgaaaaattaatgaaaattttagcttgagaaaacggaga
Run BLAST on NCBI

transcript from alignment at sc0000098:504416..516513+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009718 ID=TCONS_00009718|Name=TCONS_00009718|organism=Clytia hemisphaerica|type=transcript|length=12098bp|location=Sequence derived from alignment at sc0000098:504416..516513+ (Clytia hemisphaerica)
AGCACTTCGATGGGAGAAGAAAGAAGGTAAACTGTTTCCTCCAATTTATT
TTTGCATACTTAATGATTAAGTTAAAGATAGCTTTAAGCattttattagt
gtcaataaattcgtactaatcagaaataaatgtcatgtaacaagcacgta
aaaatttcgagtagaagcgtgatttgtcttcagactttaattttgcaacc
tgtgaaTTTAAAGCAAATCCGCCAAACCATTcgtcttttgatttttgtag
aGTTTGTACCAAAGAGAGGCCAAATCATCNTTTGATAACTtacattttta
cttttttgatttttaggtcCAAATCAAATCGCGATTAGGTGGTAAACTGT
CCGATATTGGTTTCGATGCTTTTGAAGTGTTCGATGGAGAATGCAGTTCT
GGTGAAAAATTGACTGATTGTAAATTTGATGGCAATGATGATACTTGCCG
GTACACTGACGAAAGTTGCACACGTAAGAAACTCATTTATTCATAAGTat
tccattgagtttcaagccccaAGGACTAGAgacgaaactttaacccttct
caggcaagagaaattgaagccacttatttcccatccaaaatgcgccgtaa
tcatgacgacggattgtatctaacGGTCtctttgttttattatatatttt
gaccCAGATGGTAGCTTTTGAATGAAGtcgcctggaattccagggagGAT
TACCATTTTATTCAGTTAGAGTATGAAACATTTAGATCTTGTTTCGTTTG
AAGATATCATAACAAATGAattcaattttataaaaattttaacacATATG
TTCTTTTCGTTATAGCACTTCGATGGGAGAAGAAAGAAGGTAAACTGTTT
CCTCCAATTTATTTTTGCATACTTAATGATTAAGTTAAAGATAGCTTTAA
GCattttattagtgtcaataaattcgtactaatcagaaataaatgtcatg
taacaagcacgtaaaaatttcgagtagaagcgtgatttgtcttcagactt
taattttgcaacctgtgaaTTTAAAGCAAATCCGCCAAACCATTcgtctt
ttgatttttgtagaGTTTGTACCGAAGAGAGGCCAAATCATTGGCTCCAT
AAGAGTAGCCAAGAAAGCATGGCGTATGTCAGTGGATATCAAATACCTTG
GTCCCGTAAATAACTGGGGAAGTATCATTCATTTTACTCGCGGTGGTAAT
TGCTGCGGAAGAGGTATGTTTGATTTGACCCAGACgacacacaacgtcaa
aacaacgtccatgtgacattcataacgtccataaaacgttatttgaacgt
taaaacaacgttgtgtgccagctgatgatgttatttttattttatacatT
ATGTCCCAAAAAGAactgaaaaatttttatattagacgaaaataaaaaaa
tgtagtgtttccggaaaccggccgggtaaaaaaaaaacttctgacccggc
cgcagactttCGTTAGTACTTGGACATTAGTATTCAGgccttacttcata
ctgtttgtacataaaagttatctttaaagttataTTCtagcaaaaaagaa
ttttttccggccagccgcatgagagcttttttccttcacccgcattccgg
aaacagaactttttttattttcgcctaaagtaaaatcctcataacttatg
cgaaattttatgacttttataCTTAATTTAATCTCAAACatttattcaat
catcttgggaattgaaaacCCACTGTTTGAACAGAGaattttaatcttat
ttcaatCATTCTAAGCccagttttgaaaattttgactttaaaaaaaaatt
ttccactttttcgGGACACTCTGTACAGTGAattctctttaattcgaacc
tatATTCTCtagttcgatcttcaagggaccaagactCTCTGTTTCAAAAG
AATGTGGACATTTTAACAATTTCTCAGTATTTATTTATGCTACTTTATGG
GCACGCAACGTCTTATGGACATTCAATGGACGGCTTTGAGACCTTTGAac
gtcctagaaacgtacattagtcgtccaaaagacgtttgtgcCCATATGCT
ATGTTAAAAAGCTATACGCTcactgttgaaaagatattcttaAGGGGAAT
AATctattttgaaaagttgaaaaataaaggtgaaaaatgaagattttctc
TACTGGTTCAAAAATCATGACATTAGACTTATTAAGATATTTTACAGTGC
TGTAGGTACCGGGGGAGGGGCGGGCGAATATTGGGTTTTCCTCGGAGGCA
AAGGACCTAGGTTGAGTAAgggagcggtcattaagtatatCATATACCGG
AGTGGAAGGGATTTTTTTGGCAGACTTCTTATTTTTATATCCTACCAAaa
gttatcaaataaatttcataccCTACCAAAAATTGGATGAAAATTTTCGT
ACCCTACCCCTTACCAGATGGCAGCTTTATggcactttaaaatttcttaG
ATTTCAGGGTTTTCAAGAATAATGGagaattgacaaaattgaaatttttg
ttaaaataagattcagctcaaaatattttcttacccTACCCTAAGCCCTC
AAGTTTTTTACATACCCTACCCAAAAGAGGAGAAAAAAAGTCATGCCCTA
CCCAAATCCCTTCCACCCCGGTATATGctatacttaatgaccgctcccTA
AAATAGTTAGTCGTTTTCTTCCCGCTAAGAAGCGACAAAACCATATCTTT
TCACAGTGTCACTCCAAAACAACAACACAAGAAAAATCATTTCTTGCTTC
TTGTTTGATTTCAAAACCATCAAACCAAGAAGACACCGCCGAAGAGCACG
CCGTCAATTTTTCGCTTTCCTTTTCTAAAACATCCTCCTATCTTCTGCTT
TAGGACACAGGATTCCTGGTTTATGGCTTTACGAGAACACGGCGAATGTC
CACGTGACTAGTCAAGTTGGAAACAATGGAAACCAAGCACTGGATAAAGA
GGGTGCCGACAAACTGAAAGAAAATGGTCAATTTTCAACACTGGTTGTGG
AACAAAAAAAGGTATGagtcctttttttcaaaaacatgacAATTAATTCC
CCTAaggtagcctagaaatctaatcTAGTTTGATTAAGTCACCAGGATAA
ATCTGATAATAAGTTATGACTGAATAACAgtattcaaaacaaacttaaaa
tccgCAAATATAAAAAGAATCTTTAAAGCGCTGAAAACACTATATTGCCT
AAGCCGTGTGTCTTaaccttgtgaatacgggcttagttaactaggcaaCC
TCTAAGGTAGACCTTAGTTTTTTTTACCGGATATATAAACAATAGACGTA
TTGAAGTTGATTAATAGACCAGTGGCCGAGGTAGTGGATTGTGTcgcttc
gtagggcaccccttagatcagggcaaatttttgatattatgctcctaata
gggcgtagaattgacaaaaaaatttgcccttcgaatctcctgcagttttc
gagtgaagctatttttagtaaatcgatagaacttatcaagggcccccttt
actaacggtttttttgaAGTCGAGTTGTtgctaccaacggattcagtgTG
AAAAGTAggtaaagaaaatggggttatttgttaagtttcaaCCACcaggt
gccgagaaatggcatttttaaggccaAAAATAGACACGTTTTCCGATGAC
ATCAGCATTTTTCTAGttgcattttcagaaaaaattcccTCGGCTGTATA
GCCCTGAGTttgtagtatccaaaaatggtatggtttgttatgttttagtg
tctagatctcgagataattcatttttaaggtgggtaaATATACTGAAAAA
CTGCTATATTATTGCTttaatatttaaaccaaaatatctcgagatctaga
catcgaaagttaacaaatgATActaccggcccttattacgtcAGCGACAA
ATAGATGACGCTAGtaggggccggcgtaaaaaaggGCTGGTCTATTAATT
AAAATCCATCTTTTCAACGAACCCTAAAATATTCCCTTTAAATTATCCAC
AGAGCACTGCTGACGGCTTATATTATATCACTTACACCTTGGATGGtaaa
gaaattaataaaatgaaGCAAACCCGCCCAGAAGACCATAGCTTGGTCAC
TATTTATGGTTCTGACCCTTGGCACTTGGCCGCCGACGTCGTTGTCAAAA
ATTTGATCTTCGAAAATGGAGGtaaacctttttgtttcaagtGAGGGTCA
TCGGAATACGAAAAATTCTACCttttaactttcttttaatGAATCAGTTG
ctctacccagctggcacacgacgctgttttaacgtttatctaacattcac
aacatccatataacgttagattaacgttgaataaacgttgtgtgccagct
gggtaaaaGCCGAGTCATCGTTCCATGGCTAGTCACTTTAAACATTATTG
ATTTCTACCCTTCTACTTGGggtgagctggagtttttacaagatacttca
ctaattggtcatttgaactgatagagatgacgcgttctttggaaaaagta
ataagattcttttattacatcttaacgaccaaccaaatcaaataagagct
tgtaaaaactccagcttgtcccttcTACTTTTCTTTCTATGATGTCAGAC
TTTCGGTTCATTCCTTTTGTTGTTTATTCTCTGTACGATATGTTATTTTT
TAGTTccgtttttatttatttatttctctTCCACAGTGTACATTAGACTT
TTACCGGGGTGGGGGGGGGCTGGGTATTTAGGCAAAaggggtgccgggta
tgtgcgagctataagggtccctttttcacaacctcgaaagtctctcaaaa
accattaaaaagcaaattgagtctctgtaagggtccaaaattcacgaaaa
tcgaaatttcctctcttaaaaggtcgcgtttttccaaaaattggatAAAA
CTCGAGTGAAAATCAACAAGATGTctgagaaaagtctctctacGGGTCCC
AAAAACGCCATATTTTCCTCTCTTTAAGagtcgattttcaatttttggct
tggacccgtcacctcgcaaacctaatACCCACCCCTGGGGTTTTTTATTA
ATTACAGATTGTCATGGTTATTCGCCAGTTTATATTTTCTTCAGTGTATA
TGACTACATTATATTTCTCACTCCCTCACTTTTGTTCTCTCTCTCTCACC
CAACAGTCGACCCAGATTGTAACCAAGTCTGTAACAAACCGATTGGTGAT
CCAGCGTACAGCAGTATACCGCCAGGTAAGAAATGACGTTCTCCAttggc
catttcacagtcgcaaagcgtaatgggtgatcaggaccactgcgtgctaa
tgacgacttactattggtccaaagttttgaaaagttttgaagatttttcc
gTCTAGCCAACGGAAAGCCGTTATGAAGACGCAATCAGTgtccatgatcc
atttcgactgtgaacatcacttgcctcgtattcaaacaattaccatggta
gttatgtcccttgagacatcaagtattttttttataatggaaattagttc
gaattataaagaGATTCGAATAATCGAAGTTCGAATAATCGAGAGTTTAC
CgggtaaatcaaaacatttattCATAAGAAGGATGACTACAACCTAGATT
TTTCTGACATGCTAAACATTGtggttaaaattttctttttcgttttagaG
ACGTTCAAATTATACACCAACCAAGGTAGGTCGAAACATTCTTTCTGAAA
AATCTATCTTAAAGGTCTGCGGccacttgaaatatttttcatcaaatacc
ttatcggggaaaaaaatgtcggagttttatttagtcggttTTTTTTTagt
cgggggaaaatttcgtcaccccctccaaattttcgtcactttcccccgac
attttttccccgataaggtagaaACACTTGCATACTGAAACACGCAAAAA
GTTTcactttgatgaaaaagttgctagtGTCCCACCTCAGATGGTGGAAA
TAAAACTTATACAAATCGGTTTCTAAAaccagaaaacttttgaaactttt
cattGCAGttacaaaaattgacaaaaattgttttgttgaaatttcTCTGA
GGCGGGTGGGCCACTTGAAACAAAGTTTACAATGCAATTTGTTTGTGTTT
ATTATGATGAAATTTGTTCCAAGGTGGCCccagaaatttgaatttttgtg
ttcATTTCCAAAAGTGTGCtttttcaggccttaaaacaagttttttcttc
ttttggtcaaaaatacccttcatccgccaaatttttttttccaagccatc
cgccaaattgaattccctctgactatgttatagtctaagacgaatcacta
tctaaggcAAAAGCcaaaagccgaagaaaattcacaaacaggttttttgc
caaaaagagtttacagccggtagAGTTTACTCCCGCTGATTTTTTCCGTA
TActgccataacgccataccgccaaaTTTTCCCGCCTTAACTATCATAGA
CAATAACATCGTctagtaccttatcggggaaaacttcgtcggggaaaagc
gacgaaattttggccaagtgacgaatatttttccccgacgaaaattttcc
ccagccttaatgcgtttacctaCTAcaagcaagtgacgaatatcaTTGCA
CATTATTCTTGGGATTATGCCCAGCAAACACACTATCCGGCAAATATTTt
cccccgacgaagttttccccgataaggtactgcCGTTTGTCTCCTGACCT
TATTTATAGACTATTATGCTGAAAAGTGACCATAGGAGTGTTAAACCTCA
CATACTTTTCATTCCCTACCCTACCGTAGCTCCCCTTTTAGTGCAAACAC
CCGTTCGCCCTTTTACTCCCATTCTTTGGTTTATCCGACCTACGGTAGTA
AATATGTGAAATTATTGTTTTGATCCTCTATCCAATATTCTTTGCAAGTG
GTCATAGTACGAAGCTATCGCACTCACCCCGCCCCGAGGCATTAATGGAG
GGTACAATGGTGTCCCTAAGGGGTACGAAAAACGGTAAAATCCCGAAAAA
GTGTCTatatttttccctaaaaaagattaaattttgaagaaaagtccCTC
TCCTACCTTCGGATAGACTGCTAAGGAAAAGTGATCCTCCTGGTCGTCCC
ATCTGCGATTGCAAActtactttttcaaacaaactttCTTTGTACAGAGA
CGGCGCCTACGAGAAGTAAAGTTGAGCGAACTCTTTCTGAATTAACAAAG
CAATGGAGGATTTCTTTGGATATCAAACAACTTGCCACGGTCAATGGTTG
GTCGAATATTTTGCATGCCACAACTGGTCATAATTGTTGCAACCCAGGTA
TAATTACATATAATTTTCAATCCTATAACAATAACAAATTCAAGTCAGCC
CTTGAAGgaatatctaatttttttatattttcagataAGTTATAAAGTGG
TTTGTGAATTAACCATATTCataacgtaatgttttatacggaagcaccaa
AAAAGCCCGGGGTTTACCACAAGTTTTAGTGTTTAAATTTAATAACTGAT
CCTTGTTCCGGGGGGGGCAAAATAGGGTATGTGCGAACCATAAGGAttcc
tttttcacaccctcgaaagtctttcaaagggctacaaaaacaattaaaaa
gcaaattgagtAAGTgtccaaaattcacgaaaatcgaaatttcctctccc
aaaaatttggacaaaaatcgattgaaaatcaacaaaaattttgagaaaaa
tctcCAATTTTGTCTCTCTCTCTGAGggttgattttcgatttttcgctCG
TGCGCACCTGTCACCTTGCGAACCTACTCCCCTTGTTGAAGTATTACTAA
CATTAATTATTATAGATTTTGTCAGATCTTTGATTTAAATCTTTGTGAAA
AATGTGTCGTCTAAACCAAAGCTTATAAAGTAgagaatgtttttttcttc
agggCGTCGTGTTCCTGCTATTTGGTTCTTCAACCGTAATAACAGATTAC
ATATTACATATCCAATTGGCAACCAAGGTAATACTCAATGCAACGAGATC
TATGTGGATGAAGGCAAATTTAATAATATCGCTATTGAACAAAAAAAGGT
AGGAAAAAACGCCGTCTTTTAACGTTCTTTTAACGCTATGTCGTGGACGT
TAAAATGACAATATTTTGATATCCCGTATCTTAACTGGAAAATTATAACA
CTGAGGTCAATATTATCAATATTAGTCTAATGTGCAGACTTTGTACTTCt
gacgattttttgaaatttcgacattaaaaaaatatcagttttttttaaat
aactttcgaattactttttcaaacctaatatatgatagctcaaaattcag
gttagagcatcctctatacgattaaaaaagaatgaacaacaaatttaaat
cctgaagctcaaaatatctcgacaaacctgtatactcttttttggtgcac
ccggtatagaTAAAACTATATCCGGGGGGGggacttgatttaaaaacaAC
CGTACGTGTGGCCCAAAAtaaggcctttgaaatcggaccttTGCAGTGCA
GAGACAATTTGGCCCAATTAGAGTAAACATGGGCGAAAAATCGAATAATT
GGAATAACCTGCACTTCTGACCCACCAAAATCGAGGGCCGTACAAGTGCT
GATTTACtatcgtcctcagctggtcaggatctagtcaaattagaacatAC
ATACATATAAATCACATTGAAGATGGTTTTCACGAGACAAATCCTCGACT
GCTCAATACAGAACAGGACATCATAAGATAGTGCATTACAATAGCCAGTC
atcatcaaaacttttttttaccatttttctctTATTAACATCCTCTAGGT
TGGTGATGAATATTGGTTGAAAGTTTTCAAAGATAATACTGAAGTGGAGA
AATGCACAGTACAGCAATCTATACCGAGATCTTTTGCCAACGTCAAATAT
TACTTGAGTGACCCGTGGTACAATGCCGCTAATGCAGTTATCAAAAATgt
cgaatttcaaaatttcggtGAGACAAAATGTTGCACGCTGCACATCTTTG
GGCGTTATACACCTTTTCCACCTTTGTCGTGTGGTCAGGCTTTACCACCC
CAAACTCGATCCAACCctgtttttacacttttttctattgtctttaggtg
cgaaaaacttcgggctttataaatctaccCCTTATACCTGGTACAAAGTA
GTTTTTCACCAAGTTTGACTGCCCACTTGGCACTGAATCTAGGACTGACT
TTTTAGCCCCAACCCCCTAGATTTAATTGTgaatttctcttttcttttta
ctCCAGAACGATCGTATCCATGCGGTGACAAATGTAAAGGAATAAAGATT
ACTGACGTCATCAACGGAAAAACAGGTaatttttgtgaatgttttttAAT
TCTGCCAAAGCTCTGTACAGCGAGGtaatgtgcaaaaaatcatggcgttc
taaatctactAGTTACCAGGTCTGTAGATTTAGAACGTCATGGCGAAACG
TTATTCTTGctcaaaattccataaaaaattcCAGCCTTGCTTGTTTCTAT
TACTATAAAACATGAACTCTCCCCAGcagttggcgtgatggcgtgatggc
gtaatggcgtgatgagcttttccagaaaaaatttgaatatggaggGGTGA
TCTACCCCCTGGACAAGGGgacttttgcccccccccccggacaacgggtt
ttgcccttagaacaagcatcagttgacccccgggacaacccaaattaccc
ctgaacagagcaaatttaccccccggacaaagtgacttttgccccccccc
ccccggacaacgggttttacccttagaacaagcatcagttgacccctggg
acaacccaaattacccctgaacagagcaaatttaccccccggacaaggca
aattttgatgatttttcgctacctcCCGGACAACATATCCTCCACCCTCA
TGTAccagacattttctggaagagcccaatttggCCTTTTTGGCGTGATC
TCTAATAAAAGTGTGATGCGTGATTGATAATAGGATTGTTTTGTGAGGGC
GCGATGAGAGAATATTTTGGGCGTGATGGGCGTGATtgctattttttttt
cagattatgtAAGGGCGTGGTCAGGGACACTATTAGGAATATTCTATACA
CAAACTTGCACTAATTTTCAATTCTATATactctctttttttataagcat
aacgtttataagcatactcaGGCTCAAATTCGGTAAAGaaataagcataa
tgctaatcatatctccaagctgaaatgcaaaaaaacttGTGCAGATTTTC
TAAAATGCTGACCTTTTGagggttacttttaaagctgtttgagcTTTCTT
AGATCAAGGAGTTTCACCATcgccaaaatacaaaaatttcatgaacccaa
agaaaatcaacaaatcgaCTAAGCTATATGCttttaagcataaattatgG
CTGAAAttgagattttgctaagcatattgagcgtcgacccgattttcccg
tatgcttattttaaaaaaaaaagcgtattTTCTTTCTAGTTGCTGGCGGT
GGTCTTGCTAAAAAATACAGccttttttggtttttcaattATTAATCACA
CTTAAATCGAATTTCACCAACCTTtcttatttcatatttttttctttcta
gttGCTGGTTTCAATTTCACTTCTCAATACTGTAGCGATAAAGCCTTCGT
TGTTATGGCAGACAATCTTCCAGACTTTTCTCGATTAGCCTGTATGCGAT
TCTATTATCGAATTGAAAAGGCTGCCAGTGGTAATGTACACCACTGCCAC
ATCCACCGGTATGGTACAGGACGAAGTCATCGATTAAACACAGTCAGTAA
TGAGTGGACCAAAGTGGAAGAGACTTTACCCAAGAGGGCACATTGGGTAT
GTAGTATAGTTTGTTCCTTCCTTCCTTATAAAAGAGAAAGGAGTGTATCA
AAAAACACCGGCTAAAATTTAGAGGAATTTACAGTATTCTTGgtttccaa
ataaacgccccctcccccgtttattaattttaaaatcatccaaaaatatt
cttacggtatttttaatttaagatcgaaattggcaatctacaggttaaaa
tgcattataaatggcattcttagattcagttgctaaattccatgatggtg
atattcttaccatattcttaattttttggccattttcatcatggacattc
ttataaagtgtattcttataaaaaaagctgtGTACTTAGTCTAGATCGAC
GTATGATAAAAGAATTGATTTATCTCAACAATAGGTTGGCGTGAGTGGTT
ATTTACGAGGCGCCCATTGTCCGACTGTCTCCATAGCTGGATTCTCAGTA
ACTGAAGGGTCTTGCCAAAGTGAAGAATAATGAATGGAAAATGAAGCAGA
AGGGAAAATTAATGAAATGGAAACGGATCAGAACAAAGGAAACAAATTAT
TTGAAGAAACCTTTTATTATGACTAGTACGCACATATATACTCTTATACA
TTATTAATTCCAATAAACGCCCCTGctcaaattctaaaaatttaataaac
accCGGGACGTTCATTCAAAGTAATACGTNAATAAACGCCCCtgctaaaa
ttctaaaaatttaataaacaccCGGGACGTTCATTCAAAGTAATACGTTA
TAAGTTTATTGGCACCCCTCATCTCCAAAGTGAGCCATAAGCCTAGGAGG
GGAGATCCTTGTTTTGAGTATTCGAATGAATGTCACTACAGTGGAAACTC
CCTAACTCGAATACCTCCTTAAATCGAACAGGTTTTCTTGTCCATTCAgc
taacaatgccttataatctttactccatatctcgaaatctccttaactcg
aacaaatttgtgttccctacgcgcgtgttcgagttatagagacgcCACTG
TATTATTCGGATGGAACTTTCTTTGAAATTGAAgatttagtagggggaaa
tttgtaaaatcgctcgatttttttagtcaaagcacttgttatacattttt
ggaaagctaaggggtaggggaatcaaaataacttgggtgccaattttgtt
tcggacactttggtgtgattttcggacaaatacgacggtctcgggcaaaa
atcatagggtgaaaaattaatgaaaattttagcttgagaaaacggaga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005433XLOC_005433Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009718-exon-sc0000098-1491911889:504416..504441TCONS_00009718-exon-sc0000098-1491911889:504416..504441Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1510915933:504416..504441TCONS_00009718-exon-sc0000098-1510915933:504416..504441Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1575043694:504416..504441TCONS_00009718-exon-sc0000098-1575043694:504416..504441Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1491911889:504666..504683TCONS_00009718-exon-sc0000098-1491911889:504666..504683Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1510915933:504666..504683TCONS_00009718-exon-sc0000098-1510915933:504666..504683Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1575043694:504666..504683TCONS_00009718-exon-sc0000098-1575043694:504666..504683Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1491911889:505497..505628TCONS_00009718-exon-sc0000098-1491911889:505497..505628Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1510915933:505497..505628TCONS_00009718-exon-sc0000098-1510915933:505497..505628Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1575043694:505497..505628TCONS_00009718-exon-sc0000098-1575043694:505497..505628Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1491911889:507269..507426TCONS_00009718-exon-sc0000098-1491911889:507269..507426Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1510915933:507269..507426TCONS_00009718-exon-sc0000098-1510915933:507269..507426Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1575043694:507269..507426TCONS_00009718-exon-sc0000098-1575043694:507269..507426Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1491911889:508418..508586TCONS_00009718-exon-sc0000098-1491911889:508418..508586Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1510915933:508418..508586TCONS_00009718-exon-sc0000098-1510915933:508418..508586Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1575043694:508418..508586TCONS_00009718-exon-sc0000098-1575043694:508418..508586Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1491911889:509572..509640TCONS_00009718-exon-sc0000098-1491911889:509572..509640Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1510915933:509572..509640TCONS_00009718-exon-sc0000098-1510915933:509572..509640Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1575043694:509572..509640TCONS_00009718-exon-sc0000098-1575043694:509572..509640Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1491911889:510064..510090TCONS_00009718-exon-sc0000098-1491911889:510064..510090Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1510915933:510064..510090TCONS_00009718-exon-sc0000098-1510915933:510064..510090Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1575043694:510064..510090TCONS_00009718-exon-sc0000098-1575043694:510064..510090Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1491911889:511563..511712TCONS_00009718-exon-sc0000098-1491911889:511563..511712Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1510915933:511563..511712TCONS_00009718-exon-sc0000098-1510915933:511563..511712Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1575043694:511563..511712TCONS_00009718-exon-sc0000098-1575043694:511563..511712Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1491911889:512318..512463TCONS_00009718-exon-sc0000098-1491911889:512318..512463Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1510915933:512318..512463TCONS_00009718-exon-sc0000098-1510915933:512318..512463Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1575043694:512318..512463TCONS_00009718-exon-sc0000098-1575043694:512318..512463Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1491911889:513214..513382TCONS_00009718-exon-sc0000098-1491911889:513214..513382Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1510915933:513214..513382TCONS_00009718-exon-sc0000098-1510915933:513214..513382Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1575043694:513214..513382TCONS_00009718-exon-sc0000098-1575043694:513214..513382Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1491911889:513672..513740TCONS_00009718-exon-sc0000098-1491911889:513672..513740Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1510915933:513672..513740TCONS_00009718-exon-sc0000098-1510915933:513672..513740Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1575043694:513672..513740TCONS_00009718-exon-sc0000098-1575043694:513672..513740Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1491911889:515017..515261TCONS_00009718-exon-sc0000098-1491911889:515017..515261Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1510915933:515017..515261TCONS_00009718-exon-sc0000098-1510915933:515017..515261Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1575043694:515017..515261TCONS_00009718-exon-sc0000098-1575043694:515017..515261Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1491911889:515650..516513TCONS_00009718-exon-sc0000098-1491911889:515650..516513Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1510915933:515650..516513TCONS_00009718-exon-sc0000098-1510915933:515650..516513Clytia hemisphaericaexon
TCONS_00009718-exon-sc0000098-1575043694:515650..516513TCONS_00009718-exon-sc0000098-1575043694:515650..516513Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098supercontigsc0000098:504416..516513 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.638322	0.592002	0.132841	1.17584	2.23217	2.14059	1.62236	0.654128	0.513722	0.839888	0.0234713	0.552581	5.39929	2.74243	1.213	1.75353	1.29805	1.56073	6.99564	7.59025	0.978339	1.41922	0.926324	1.12559	2.5445	2.02726	2.27777	1.27492	2.0113	3.07111
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009718 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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