TCONS_00009673 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009673
Unique NameTCONS_00009673
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length187

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009673 ID=TCONS_00009673|Name=TCONS_00009673|organism=Clytia hemisphaerica|type=transcript|length=187bp
CGCTTCATTGCTATGGACTTCAAATATCTTACCCTGAAGTTAAAGATTTT
GCGTCGCTTCTTTGCTATGGACTTCAAATATCTTACCCTGAAGTTAAAGA
TTTTGCGTCGCTTCTTTGCTATGGACTTCAAATATCTTACCCTGAAGTTA
AAAAGTTTGCGTCGCTTCATTGCTATGGACTTCAAAT
Run BLAST on NCBI

transcript from alignment at sc0000097:544036..544222

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009673 ID=TCONS_00009673|Name=TCONS_00009673|organism=Clytia hemisphaerica|type=transcript|length=187bp|location=Sequence derived from alignment at sc0000097:544036..544222 (Clytia hemisphaerica)
ATTTGAAGTCCATAGCAATGAAGCGACGCAAACTTTTTAACTTCAGGGTA
AGATATTTGAAGTCCATAGCAAAGAAGCGACGCAAAATCTTTAACTTCAG
GGTAAGATATTTGAAGTCCATAGCAAAGAAGCGACGCAAAATCTTTAACT
TCAGGGTAAGATATTTGAAGTCCATAGCAATGAAGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005409XLOC_005409Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009673-exon-sc0000097-1491911889:544036..544222TCONS_00009673-exon-sc0000097-1491911889:544036..544222Clytia hemisphaericaexon
TCONS_00009673-exon-sc0000097-1510915933:544036..544222TCONS_00009673-exon-sc0000097-1510915933:544036..544222Clytia hemisphaericaexon
TCONS_00009673-exon-sc0000097-1575043694:544036..544222TCONS_00009673-exon-sc0000097-1575043694:544036..544222Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097supercontigsc0000097:544036..544222 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009673 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top