TCONS_00009666 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009666
Unique NameTCONS_00009666
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length292

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009666 ID=TCONS_00009666|Name=TCONS_00009666|organism=Clytia hemisphaerica|type=transcript|length=292bp
CTTTTTATAAAACCTGATGAACACTGATAGAGTAAATAAATAAGCATTTC
CCTTTTAATGACTTGTGAAAGTTATAACCTCTAAAGCTCAAATTCAGGgt
tgtttttaataaaaatatagaaaaatctTTCATCTCGATGATGAAATAAG
TCCTATCAAAACATGAAGGTGTCtggaaaagtgttttcatttgtttttat
gATCAACAAAGTTTCCATCCATTCACGCAATCATTCTCATATTCACTCAT
CCaccattattttgttttttttcactattttttacAATCTAA
Run BLAST on NCBI

transcript from alignment at sc0000097:403914..404205

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009666 ID=TCONS_00009666|Name=TCONS_00009666|organism=Clytia hemisphaerica|type=transcript|length=292bp|location=Sequence derived from alignment at sc0000097:403914..404205 (Clytia hemisphaerica)
TTAGATTgtaaaaaatagtgaaaaaaaacaaaataatggtGGATGAGTGA
ATATGAGAATGATTGCGTGAATGGATGGAAACTTTGTTGATcataaaaac
aaatgaaaacacttttccaGACACCTTCATGTTTTGATAGGACTTATTTC
ATCATCGAGATGAAagatttttctatatttttattaaaaacaacCCTGAA
TTTGAGCTTTAGAGGTTATAACTTTCACAAGTCATTAAAAGGGAAATGCT
TATTTATTTACTCTATCAGTGTTCATCAGGTTTTATAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005402XLOC_005402Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009666-exon-sc0000097-1491911889:403914..404205TCONS_00009666-exon-sc0000097-1491911889:403914..404205Clytia hemisphaericaexon
TCONS_00009666-exon-sc0000097-1510915933:403914..404205TCONS_00009666-exon-sc0000097-1510915933:403914..404205Clytia hemisphaericaexon
TCONS_00009666-exon-sc0000097-1575043694:403914..404205TCONS_00009666-exon-sc0000097-1575043694:403914..404205Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097supercontigsc0000097:403914..404205 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.68642	3.32364	3.85906	6.60711	0.574537	0.908014	0	0	0.359015	1.33409	1.2949	5.67479	0.56669	0	1.69343	0.259616	1.91895	1.96687	0.905777	0	0.823837	1.80827	4.39639	1.33232	0	0	9.34694	9.35185	3.31009	3.85423
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009666 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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