TCONS_00009630 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009630
Unique NameTCONS_00009630
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1410

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009630 ID=TCONS_00009630|Name=TCONS_00009630|organism=Clytia hemisphaerica|type=transcript|length=1410bp
CGTCAAAACCAACTGTAACCCTCTACGTTGATTGTATGGAAGTTGATAAA
CAAAGCTTTGATGTCTCTATGAAAGAAACATTCATGGAAGACAGCTTAAA
CTCCGAACTCAGATTGAATCAATACCAAAGCATCTCTGGCAAAGACCCTT
TAAAATTTATCGGTGGTTTACAAGATATTATGTTTTCGTTCACAAGAAAA
TATAAATTCTACATCGATCCAAAATGGTGTCTTAACATGGATGTGCAAGG
TACTTCTGGGCTCAGAGCTCACCAAGATCCGCGCGTAGTGGGAGGAAATA
GTGGTTATTATGGCAAAGATATTGCTGATATCCAATCTGCTGTCAAAAAT
ATGCAATTCCAAATGGCAGCCCAAGTCAACGAAATCCGATGGATCCGAAA
ATGGATTCAACAGTGTTCCGAATGTAAAATCGGAGAAGGAAAAGCAGCAA
ATCTTACAGATCGTGTTTGTACAGTTGGAAAATGTGCAAGTGATGCTAAT
TGTAATGAGCTCGGAAACGGTCGACATGAGTGCGAATGCAAAACAGGGTT
TGCTGGAAATGGAGAACTTTGTGCTAAAGATACTGACAAAGATGGTATCC
CAGACAATGAGATTCAATGTGAAGGAAAGAAATGTAGAAAAGATAACTGT
CCAACTTTCCCCAACTCTGGACAAGAAGACGCCGACAAAGATGGCAAAGG
TGATGCTTGCGACGAAGATGATGATAACGATGGAATATTAGACGAAGACG
ATAACTGCCCATTTGTCGCCAATCCCAACCAAAACGACGCCGACGGTGAT
CGCAAAGGAGATGCTTGTGATAATTGCCCCAACACGCCGAACAATGATCA
ACGTGATAGCGATGAGGACGGAAACGGAGATGCATGCAGTCGAGACAGTG
ACGGcgatgGCATCCGTGACAAAAGTGACAATTGCCCACGTGTTTCGAAC
ATTGACCAATTAGACGAAGATGGTGACTCAGTGGGAGATGCTTGTGATAA
CTGTAAAACGAAATACAATCCAACACAAGAAGACACTGATAAAGATGGAG
TTGGTGATGTATGTGATTCTGGCAACGATCTTGACAAGGACGGTATTCAA
GATGACAAAGACAATTGTCCATACGTTCCCAATGCTGATCAACTGGATTC
TGACAACGATGGAGATGGTGATGCTTGtgacgatgatgatgataatgata
AGATTGTTGATGGTGATGATAATTGCCGAATCATTCCAAACCCTGATCAA
AAAGATTCTGACAGCAATGGCATTGGTGATGCTTGTGACCCAGATTTTGA
TGGAGATGGTAAGACCAAAGGAGATGTTTGTCCAGAGAATCCCAACATTC
AAAACACAGACTTCAACAACTACGTTCATATCATGTTGGATCCTATTGGA
TCATCACANN
Run BLAST on NCBI

transcript from alignment at sc0000097:233709..241779-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009630 ID=TCONS_00009630|Name=TCONS_00009630|organism=Clytia hemisphaerica|type=transcript|length=8071bp|location=Sequence derived from alignment at sc0000097:233709..241779- (Clytia hemisphaerica)
CGTCAAAACCAACTGTAACCCTCTACGTTGATTGTATGGAAGTTGATAAA
CAAAGCTTTGATGTCTCTATGAAAGAAACATTCATGGAAGACAGCTTAAA
CTCCGAACTCAGATTGAATCAATACCAAAGCATCTCTGGCAAAGACCCTT
TAAAATTTATCGTAAGTTAATACATCATTGGTTGTAATTTTTCATCTTAA
ACGGAAAATTAGCCTATAATAGACGTCTTTATTTCTACGCTGTAACGTCT
ATTCCACTTTGCGTTTTTTTCGAATATTTTGAGCCCAGGTTTTCAATTTT
TTGACTTAAACTTTCGAAGCTCCTGAAGCAGTGAAAAACTCGAATTCGCG
TCAAAGCACTTGAAAGGCTTCTATTTTACAAAAATCATTAAAGTAGAACT
CACTAAGAAACGGAATGAAAAATCCCGGTTTTGGTGCGGTGCTCGCTTAC
GGAAAATAGGATTTACACACAAATAGGCAGTCCCGGATTTTTCAAATTTC
ACATACTGCGCAAGAGCTTCGAAAGTTTAAAAGTGACGTCAAAAAGATTG
AATGTTTGGAACACCAAAAGCTGGCCCAGTCGCAAAGTCATCGCATTGAT
GAAAGATCCTGCATGAGTTTGCTTTGAGAATTTCAGCAGTTGCCTAATAG
AATTGCCCTTTATTCGTCCTCGATTTCAGGCTTGAAATGTTCTTTTTTGT
ATCCTTTATATAGGGTGGTTTACAAGATATTATGTTTTCGTTCACAAGAA
AATATAAATTCTACATCGATCCAAAATGGTGTCTTAACATGGATGTGCAA
GGTACTTCTGGTAAGCGCATCAAAACATAAATATTGTTATATCAAATTTA
TGTTTTTTTTAATGTTTTCTACGGGAAGAACCCGGTTTTTACAAGTAGTG
GCAAATTTTATACAACTTTTGTCTAGTTCAAATTTGCCACTACTATGGCT
AAAACCGGGGTATTTCCGTAGAAAACATTACGTCATGAATATCATGAATT
TCAGGATCACACATAAAAGGACCTTCTGGCCCTCGAGCTCCAACCCTGAA
CCTAACTCATACTAGAGATATTGGAGAAGCACGGAATGATAGATAGGGGA
AAATAGGATCGTCTTTGAGGTTTGTTTTTCCGGCACTGATATGAAGGAGA
ATTTGCTCTGAAAGGGGTTTTATTCGAATCTTTCTTTAATTCGAACTAGT
TCTCAGTCCCCGTCAGAGGAAACCCCTCGTAAAATGCTTTCTATAATTCG
AATCTCTGTTATTCAAATTCGAATTAGAGAGAGGTAACCAAACCAAAATT
ACTACTAAACTAAATAAACTAAAGTACAATGATAATCGATTTCTTTTTAC
TTTCAGGGCTCAGAGCTCACCAAGATCCGCGCGTAGTGGGAGGAAATAGT
GGTTATTATGGCAAAGATATTGCTGATATCCAATCTGCTGTCAAAAATAT
GCAATTCCAAATGGCAGCCCAAGTAAGTACTTTGCAATTATTACTATCAA
CTACCTACTCAATTACCAAGGCAAACCCTTTCGGAAAAGCAAATTTTCAT
TCCGTTAGCAGTCAAACCCAGCTTTACCGGCCAAGACTCAGCTGAAGCGG
TCGTCAAAAAGCAAAAAAAATCCCTCAAGCTTAAAAGTTTCGTTTAAATC
TTCAAAGTTTCAGTAGTCGGACTCAATGAAAACTGCCAGTGAAAACAAAA
AGCTTTACTATATTGTTAAATTTTTGATTTGAATTAGATGTGCTTGTTGG
AAAGATATTTATGAGTAAAAAAGATTCTAAAAAAAATTGAAAATGAAGAT
GGTGATCTAATGGAAATTACTTTAAGGAACTAATTTTGTCGACAACGCAT
TTCATTCTCGCTAAAGTTAAAAAAATTGTTGCTTCTCTTTAGATACTCTG
CATACTAGGAGACTTGAAACGAAACAAGGTAGAATATGGTATTAAATCTA
ACTTTCTCATAATAGGTCAACGAAATCCGATGGATCCGAAAATGGATTCA
ACAGTGTTCCGAATGTAAAATCGGAGAAGGAAAAGCAGCAAATCTTACAG
ATCGTGTTTGTACAGTTGGAAAATGTGCAAGTGATGCTAATTGTAATGAG
CTCGGAAACGGTCGACATGAGTGCGAAGTAAGGAAACTTTTTACAAATGT
CACCACGGCATTGATTTACTCTTAGGTTCCAAATAAACGTCCCCCCGTTT
GTTAATTTTAGAAAATTTTCCAACCCTTCCCGGACCTTATTAGGACCCCC
TCCCCCGTTCATTAATTTTTAAGAATTTGTTCAGCTTTCAAAGAGAAGGT
CCCTTATCTGCTCTAAATAGCCTGATTTTAGCCTATATTTACCTTTATTT
TGGGTTTTCAAAAGTACAATTTCTAACCCCGGCAATAAGCCCCCCGTTTA
TTAAAATTTTGAAAATCCTCCCCCGTTTATTAAAATTTTGAAAATCCCCC
CGTTTATTCGAACCCCTCCCCCCGTTTATTTGGAACCTAAGAGTAATGAC
AATCCTACGTTACCTTAAGGTTGTTAAAATCGACGTTAATTTAAAGTTTT
ATGTGGAAACCTGGGTTCTAGAGTGAATACAGAACTTTCAGCTGATGAGA
TTTTTATATTTTTGATGGAAAGCATTTTTAGAACATCTTTTTGGTGCGGC
CTACGGAAATGATTTTCTTTTTTATTCATGTAGTTCAGCCACTGTATATG
CACGCAAGGAGCATTGTGGTCTAGTTGTCTAAAGCGTCACTTACCCAGCC
GGCTCGTCGGGAACCGAGAAAATAATCGAACGACTCTTTAAAAGTAGTGA
TTAACTTCCAGCGGATTTTATTAAAACTACTTCTTATTCATAAAAAATTA
TTTAATGTCTCAAGAGACATAATCACCATGATAATTATATTTGAATACGA
GGCAAGTGACGTGACGTGCCATGGTATCAGCCCCCCCCAGAAATCTGAAG
GGCGNAGAAATTATCTGCTGAATAGGGGTACCTAACTCAAAGCAATTTTT
CGAGGGGACCTAACTCGTTGGGGGCACCATGCTCAATGGGGGCACCTAAA
AAGTGGGCTGAAACCATGGTGACGTGACGTAATTTATGAAAAGGTCTATT
CTATTCTATTCAAAGTATCTACAGTTGACTTTATCTCATTCAAAAGTATT
TCATCCTTTCCCCCTTCTAGTGCAAAACAGGGTTTGCTGGAAATGGAGAA
CTTTGTGCTAAAGATACTGACAAAGATGGTATCCCAGACAATGAGATTCA
ATGTGAAGGAAAGAAATGTAGAAAAGATAACTGTCCAACTTTCCCCAACT
CTGGACAAGAAGACGCCGACAAAGATGGCAAAGGTATGAGATCTGGGTTC
GAGGTTGGCAAATTTAAATTTTCATTTAGAAAGTTATGATCATTGAGTTT
CAAGCCCGACGGGCTAGAGGCGAGACTCCTGGATAAGAAATTAAACCACT
TATTTCCCACCCAGATCGCCCGCGCGTAGTTTCTACACAAACGCTGGATT
GAAACTAAAATCTCTCGCTAGATTTCAAAAAATACATTCTTCAAAAACAA
AGGAACCGCTAGGTACAATCCGTCGTCATGATTATGGCGCGTTCTATGCG
CGTTTTGGATGGGAAATAAGTTGCTTCAATTAAAGGGTTAAAGTTTCGCC
TCTAGCCCTTCGGGCTTAAAACTCAATGGTTATGATCTCATATAGCGGGC
CATTCCTATTCGAAGTTGGAAAATTGGAACGTTAGATACCTCTATTTTTC
ATGTTTGTTAAGTTACTTGATTTGGAAGCAAACGTTCGAATCTGAGCATG
TGATCTTATACACAAATCAAAAGTTTGTATCCATAATGGATGAGCTACGT
AACTTAACAAAACATGAAGTACTTCTATGTAGAAGGACATAACGGTAACA
GATCATTCCGATTCGAGATAAAATCATCTCAGTGGTACCAGGATTATAAG
AGAGGTGCTTTGTTTTCCTTATTTAAATTTGAGAATAATATAAATTTAAG
GACGTTTTTCTTGGGTGTATTTTGATTAAATTTAAGATTCGGTACAGACT
CTTTATTTGTGAGGTCGATAAACACACATTTAAGGAAATTTTTCTTGGGT
GTATTTTGATTAAATTTAAGATTCGGTACAGACTCTATATTTGTGAGGTC
GGTATGTCAGTCAGTATGCAAAGGTGGTCCTCAAATGATTTAAAAATACT
TTGACAATATTTAAAATATTGAAAGTTATTGATTGATTTTAAGTGCATAT
CACTTAGCTGTTAATTTTGAATGATATGTGTTTATCGGTAAAAAATTTGT
CGGAAAAAACTTTCCGTCGTTAAAAAGTGACGAAATTATTGGCAAGTGAC
GGATTTTTTGATGACGAACATTTCTTGCCGGCGACTTTTTTCACCGACGA
ATTTTCTAACGATAAGGTAATCATTTTCTCATCCCCAGGTGATGCTTGCG
ACGAAGATGATGATAACGATGGAATATTAGACGAAGACGATAACTGCCCA
TTTGTCGCCAATCCCAACCAAAACGACGCCGACGGTGATCGCAAAGGAGA
TGCTTGTGATAATTGCCCCAACACGCCGAACAATGATCAACGTGATAGCG
ATGAGGACGGAAACGGAGATGCATGCAGTCGAGACAGTGACGGCGATGGT
AAATTTTATTGTTTTGAGCATGAGGGATTTAGTTTTGTTTCACCTTAGAT
TTTGGCACCTTAGATTTTTGCTGTATTTAGGACGATAGAATCTAACTCTA
CTTTTTCATGGCTTCCACAATGCACTTTAATGAAACTTTAATATATTATT
GGTACAAAGAAATTTGCATAAAAGCCACGTAGGAAATATGTAGGAATAAA
CTACCTTCTATGGTGATTTGGTGCCTTGAGCTATTATACCAATGGTAAAA
GGTCGGTTCCATTCCCAGAAACATAAGTGCCAATAGACTAGAGTCTACTT
TTGGCTGAACTTTGCTTTTTGATAATTTTTTATGACGCTGAGTCCAGTGA
AGTAGACTAGGAGCGTTTGGCGAGGTCGCCATTTTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTC
CGCCTAAGCAAAAGCATATTACCATATACTACCGGGCCACTTAATCGCGC
CATCCAGTCTATAAAAAAGCTTTAAGTGGACCCCGGGCTAAAGTACCAAT
AGCTTTTACCGGCCCACCTTTTTATTCTTGACACAACCTGTCACTAATTT
GTGTGCTGTAAGCGATGCAGAAACGATTGAAAGTAATAAAATATAATCAA
CGAAAATCTCGAATCTCCATGCATCAACACATCATATCTAGTCACAGCAG
CAGCAGTATATGCTTGCTTACCCGAGCCGCACTGATGCACCTGGGAAAGA
CGAAACACGTATCTGCTGATATCATAGGCGTAGCAAGATACCCTGTAAAA
TTTACGAGGGAGTGCAGACGTTTATGACATATTCATTATCTTTTGATAAA
ACAAAGACAATAATTACAGTGTCGTAAAAACTGCTCTCATCCATAAATTT
TGCAGGGTATCTCGCTACGCCTATGGATAGATAATCTCCATCTATCTATC
ACCTATCAACTTCAAAATTCAAAACAACACGACTAATTCATCGCTCTAAT
GACGATGCTCTAATTTTCATCTATCTATCATTTTAGGCATCCGTGACAAA
AGTGACAATTGCCCACGTGTTTCGAACATTGACCAATTAGACGAAGATGG
TGACTCAGTGGGAGATGCTTGTGATAACTGTAAAACGAAATACAATCCAA
CACAAGAAGACACTGATAAAGATGGAGTTGGTGATGTATGTGATTCTGGC
AACGATCTGTGAGTTGATTTTTCATTTGATTCAAAGGAAAAGATTCAATA
AATTCAATTCGAAAAGCTGTAATTTCTCACAATATTTTATGCAAAGAAAT
ACTGTTAAGGTTCTTGGTAAATGAAAAACTTGGTAAATGAATGTAAATGG
GTTAGCAAATATGACATTTGAGATGGATTTGGTACCATTCTGATACAAGA
ATAATGGGGAAGTATACCAGGCATTATTATAGGTATATTAGGCAGTGGAG
TTGCTTACATGTTTAGAGCTTGGTTCAGTACTGTAGCTTAACTTAAAAGC
CATGCCTCTGACAGCCTAAACAATACTGTCAGATGTGTCACAAGCACAAT
ATACGATAAAAAATATCAGAGATGTCTGAGAAGCACCGTGATTCACCTAT
CCTAGAAAAGGGAACCGTACTGGCAAAATTACTTTCTCTCTTCTCTCTCT
TTTTTATTGTTACTGTTAGTGTTAGTCAAGTTATTTCTTCTTTGTCCCCT
TTCAGTGACAAGGACGGTATTCAAGATGACAAAGACAATTGTCCATACGT
TCCCAATGCTGATCAACTGGATTCTGACAACGATGGAGATGGTAAAAGGA
ATTTACATTAAAGAATTTTTCCCTTCAAACTCCATGAAAAGATTTCTCTG
TTCATTTGTTTAGTTTCGAAGAAGAAGGGTAACTGTTGGCAAAGGCAAAG
CTTGTCGTGTCAGACGGAACAAATTATCCCAAAGTTTTCAGATTTTTTAA
ATTTCAAAGAGACGGTAGCACTCTGAACATAGAATAAATCAGTCTCAATG
GTGTACTAGAAGACAAGTGTCGAATGAAATGACGATTCTTGTAATTTGAT
TGAAGCCCCAAATGATTTAACACAAATTTCAAGAACTTAAGGAAGAAAGC
GAAAAAAGAAACTTCTGATGAATAATGCACACATAGGATGGATAAGGAAG
GATTTGATATAAAAGCATGCAAAAGAATAATGGTCAAGTAAACAAAGTTA
AAACTTTTTGAACGACAAATATTGAATCTTTACTTCAGGTGATGCTTGTG
ACGATGATGATGATAATGATAAGATTGTTGATGGTGATGATAATTGCCGA
ATCATTCCAAACCCTGATCAAAAAGATTCTGACAGTAAGTGACACTCCTT
TAACTCTTTAACTTTAAAGTCGATAATAAATTGCCTTTAACATAGAAGTG
AGGCTGGAAATATCATGAATATCCAAAGCAAACTGACAGTCGATATTTAA
AGAGGATAGGAGTCGACTATCTACGAACTGAGCGGAACAGTGGAAAAAGC
GGGGATTCGAACCGGGAACCCCTAGTTTCAGAAGTTGACGCCTTTAATAC
CATTTAATACCATTCAGCCATTACTTTCAATAAATAATTTTGCGTTTGAA
CTTTCGCTAATCAATGTCTGTGCTACCTATCTGAATCAAGAGTTGTGAAC
TGTTTCGATGAGACACATGGAAAACACAAAAAATTCATCCAAACTCTACA
TGTATTTCTATCATTATTTGTTTGGGTGAACAAATCAACACAAAAAGTGC
CCATTGCCAAAGAATGAGCTTCCATTAATTCTACATGTATTTCTACACAA
ATTCATCTTAATTTGTTTTTCTAGGCAATGGCATTGGTGATGCTTGTGAC
CCAGATTTTGATGGAGATGGTAAGACCAAAGGAGATGTTTGTCCAGAGAA
TCCCAACATTCAAAACACAGACTTCAACAACTACGTTCATATCATGTTGG
ATCCTATTGGATCATCACANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005375XLOC_005375Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009630-exon-sc0000097-1575043694:241619..241779TCONS_00009630-exon-sc0000097-1575043694:241619..241779Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1575043694:240970..241066TCONS_00009630-exon-sc0000097-1575043694:240970..241066Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1575043694:240308..240423TCONS_00009630-exon-sc0000097-1575043694:240308..240423Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1575043694:239653..239814TCONS_00009630-exon-sc0000097-1575043694:239653..239814Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1575043694:238447..238609TCONS_00009630-exon-sc0000097-1575043694:238447..238609Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1575043694:237132..237341TCONS_00009630-exon-sc0000097-1575043694:237132..237341Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1575043694:235472..235643TCONS_00009630-exon-sc0000097-1575043694:235472..235643Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1575043694:234889..234974TCONS_00009630-exon-sc0000097-1575043694:234889..234974Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1575043694:234346..234441TCONS_00009630-exon-sc0000097-1575043694:234346..234441Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1575043694:233709..233855TCONS_00009630-exon-sc0000097-1575043694:233709..233855Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1510915933:241619..241779TCONS_00009630-exon-sc0000097-1510915933:241619..241779Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1510915933:240970..241066TCONS_00009630-exon-sc0000097-1510915933:240970..241066Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1510915933:240308..240423TCONS_00009630-exon-sc0000097-1510915933:240308..240423Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1510915933:239653..239814TCONS_00009630-exon-sc0000097-1510915933:239653..239814Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1510915933:238447..238609TCONS_00009630-exon-sc0000097-1510915933:238447..238609Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1510915933:237132..237341TCONS_00009630-exon-sc0000097-1510915933:237132..237341Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1510915933:235472..235643TCONS_00009630-exon-sc0000097-1510915933:235472..235643Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1510915933:234889..234974TCONS_00009630-exon-sc0000097-1510915933:234889..234974Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1510915933:234346..234441TCONS_00009630-exon-sc0000097-1510915933:234346..234441Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1510915933:233709..233855TCONS_00009630-exon-sc0000097-1510915933:233709..233855Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1491911889:241619..241779TCONS_00009630-exon-sc0000097-1491911889:241619..241779Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1491911889:240970..241066TCONS_00009630-exon-sc0000097-1491911889:240970..241066Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1491911889:240308..240423TCONS_00009630-exon-sc0000097-1491911889:240308..240423Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1491911889:239653..239814TCONS_00009630-exon-sc0000097-1491911889:239653..239814Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1491911889:238447..238609TCONS_00009630-exon-sc0000097-1491911889:238447..238609Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1491911889:237132..237341TCONS_00009630-exon-sc0000097-1491911889:237132..237341Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1491911889:235472..235643TCONS_00009630-exon-sc0000097-1491911889:235472..235643Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1491911889:234889..234974TCONS_00009630-exon-sc0000097-1491911889:234889..234974Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1491911889:234346..234441TCONS_00009630-exon-sc0000097-1491911889:234346..234441Clytia hemisphaericaexon
TCONS_00009630-exon-sc0000097-1491911889:233709..233855TCONS_00009630-exon-sc0000097-1491911889:233709..233855Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097supercontigsc0000097:233709..241779 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0487894	0	0	0.0360827	0.54651	0.211504	1.1492	0.814284	2.00183	2.92372	8.2437	1.46509	38.2436	34.1126	22.0545	22.0788	35.4107	29.1493	38.0635	40.237	29.7432	31.2537	12.4083	17.219	42.6106	22.2094	21.2609	19.7195	5.43332	4.01097
Blast
[Close]
BLAST of TCONS_00009630 vs. Swiss-Prot (Human)
Match: TSP1 (Thrombospondin-1 OS=Homo sapiens GN=THBS1 PE=1 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 1.841e-63
Identity = 181/315 (57.46%), Postives = 215/315 (68.25%), Query Frame = 3 
Query:  483 CASDANCNELGN---GRHECECKTGFAGNGELCAKDTDKDGIPDNEIQCEGK---KCRKDNCPTFPNSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXCPFVANPNQNDADGDRKGDACDNCPNTPNNDQRDSDEDGNGDACSRDSDGDGIRDKSDNCPRVSNIDQLDEDGDSVGDACDNCKTKYNPTQEDTDKDGVGDVCDSXXXXXXXXXXXXXXXCPYVPNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRIIPNPDQKDSDSNGIGDACDPDFDGDGKTK-GDVCPENPNIQNTDFNNYVHIMLDPIGSS 1406
            C  +A CN LG+     + CECK G+AGNG +C +DTD DG P+  + C       C+KDNCP  PNSGQED DKDG GDACD+DDDND I D+ DNCPF  NP Q D D D  GD CDNCP   N DQ D+D +G GDAC+ D DGDGI ++ DNC  V N+DQ D D D VGD CDNC  ++NP Q D+D D +GD CD+  D+D+DG Q++ DNCPYVPNA+Q D D DG GDACD DDDND I D  DNCR++PNPDQKDSD +G GDAC  DFD D      D+CPEN +I  TDF  +  I LDP G+S
Sbjct:  657 CNKNAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDNCPNLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYNHNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGIPDDKDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICPENVDISETDFRRFQMIPLDPKGTS 971
The following BLAST results are available for this feature:
BLAST of TCONS_00009630 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TSP11.841e-6357.46Thrombospondin-1 OS=Homo sapiens GN=THBS1 PE=1 SV=... [more]
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