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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009609 ID=TCONS_00009609|Name=TCONS_00009609|organism=Clytia hemisphaerica|type=transcript|length=3638bp
TTTTGAATAGGATGAATATGAATGGCTTTGATGATTTGGATATTTTTAAT
TcagtttttacaattttcaataaataagaaataaattaGAGAAGAGTATC
AAACATAATATGAAGAAGGAAGGAGAAACATAAGTTTCGAAAGATCATGA
AACagtgtttaaaaaatgaagtttggaGTGAAGAGTTTTATTATCGCATG
GTTAGTAGCTTTAGTTCAAGCAAGTTACAAACCCAAAGAAGCGAAATTTC
TTGAACCAAAAGAACATAAGAAGGTTGCTGGTAAAGAGTTTCTTCATTTG
AAAGGTTTGAGTGAGGTACAATGTGTTGGTCATTGCACATTAACTGATGA
TTGCCATTCGGTGAACCACCATGGTGGTGACCAGATCTGCCTGGTGATTG
ATGAACCATTGGAAGGTGTTGGAGATTCTCATTTGGTCGATGCTCGTGGA
TGGAGATATTTCAAGAAAAGCAAGGTGAATCAAACTCCAAGAAGAAAGGA
GTTCGAAATGCTTGATCCCATCAAACCATCAACTAACATGATTAACGTTG
TGCCAATACAAGGTTCCTCATGGGAAATCTCACTCGAAGCTATCATCTAT
AGCCGTATTGATGGCCTTCAAAATGACATCATTACATGGACTACGGGAGA
ACCTAAGGATCTTGGCTCACGGTTACCTCTCATAACTGTCGGTAAAGCTG
CCGATAAAATCTTCATGATGGTGCACAGTTCAGTACACAGAAACTACAAT
TTTCAATTCGAATATCACAAATGGTACAAATTTGAAGTCAGACAAGCTGC
AGTTGGGATGAACAAAATTTTAATCACTTTCTATGTCGATGGTAAGGAAA
GAAAGCGATTGGTACAACCAAGAGGTGCATTTTTCACTGATGTCAAATGC
TTTGTGGGAGGTCCATTTATTGAGCGTACGGTAGTCAATGGGTTAATccg
aaacttgaaattcataCAAAGCCGGGAAAAATTGACagGGTTCGTACCAA
ATCTCGGACATTTGATCGAAACTCTGAATGTTTGGCCGAAAGAATGGTTC
GTGCACCTCAACCTGACAATCCACGCAACCGGCACACGAGAAGCACCTAC
AAATTCACAAAGCAATGTTCATGAGAATGTCCTACAATTTACAACTGGTG
CAAACAATGGTTTTTACGAATCCAGGATTCCAGCAATATATATAGATTCA
AATCTTCAGGATATCCAAACTCACGTTTATACGCGAACCAGTCAGCGAGA
ACTCCGCGAAAAGATCTTCGAGGTGATTTACCAACTTGGGCGGTCGTACA
ACATCTCAATCGAACACCGGCATGTGACTGGAAACCAGTTCCAATACCAT
ATTAAGGTAAATGAAAACGAGATCAAATATGACGACTTTCAAACAGAAGA
TATGTACAATGTCAAAGTATACGCAAGTAACCCATGGTACAGAGTGAGCA
ACGCAACAATACATTTCCTGGAGTATGGACCTTTGTCCCAACTTAACTAA
TCGAACAATAATCGAATTCGGTTTCTAATTAAATCAATTAAATTCAatcg
aaaaataaacaaatctaTTGGAATTGGATAAGTTTAAAAattcgaaagaa
aaattgagttTGACATTAAAAGTAAGAATAGAAAAAATGGTTTACTTCAg
atgaaaaaagaaacattttgcATTGTTTTTGCAAGATCAGCACACAGCCC
CGTGTTGTATACACATTgactttaataaaatctttttatggCGTTCGAAA
ATCAAACACATTTTAATTGAATGCTTATCGCATTTTAtcgaaaagttatc
aaaaaataaCAACGTATAATATGAACAACATACACCATGAATTAGCGGTA
CTATCTCTGTTTTCTCAAAGGACGTCTTTATAACTCGGTGATGAATAGGT
TGATTGGCAATTGAGATTGAGATCTTTCGATTTCttcaatttattttgat
atcGACTCATCAAtaacaataaagaaaaatgaacaagCTATCatttgaac
gaaaaaaaaaatcaattctcAATTCTTACCCACTTTTCACTTGTTAGTAA
ATAACATTTTGAGCACcaatctaaaaaaagaaaattatatcGATTTGTAA
ATTAATTATTAATGAGGAGTGGTTAATGAATATTTATGAAGGAGAGTATT
TATTTTCATACATTCAGCAAgggataaaaatgaaaacaactcCTCATGAC
ACAAATTTTTAACCcctaaatgggcttttccagaaaaaagttttacccct
ccccctgttgaggatattaatttttcgaagtatcgaaccccctggatatc
ctactttattagtaaagactaatcactcttaaaaatatgctcaacccccc
ctggatatcctctcttaaaaagatgcttaccctgaatatcgtatttttta
cttgaaaagacactttacccctggatatccctcccttgtagatatctaac
cccctggatatccgatatcctcaacagggggcacggactatttctggaaa
agcccaatccaAGGGTGGTGAAATTATATCAGTATCAACAACTGTAAATA
TCCAAGATTAATACATAAAAGAACATTCATGTTATAGAATTCAAGCAATT
GTGAATAAATAATTCTTACTGTAAAACCACTTGGTAGTGAAGTCTCTTAG
AGAAGAAGTTCATCCAAATACCATTGCGTTGAGTACGGTCATTcttaacc
aaaacaaagcattttttgtttagttcttctgaaatgaaaaagttagttAA
CTTTACATTGCACTTGTCAAGTTTTGCTTCAAGACAAAAGATACAAGAGA
ATAAAGCATTAAAGTCAGATGAAACCTAATCTCATTTTCCATATTTCTAA
ATCAATCAGCACATTTCTTGTTAAAGAAGTTCTCGTATAATATTTTCTGG
TATCTAGACACATTTAGAGTCAATACGATCTAAAAAATAAACTGCATATC
CAATGAAAGTTACTTGAGTTACTTTCCTACCATACTTGGCTGGTAAGATT
TTAAAGTCCAAAGAAGGGTCAGTAAAAtcataaaacaagaaaaatccTCT
TAAGTCGGTATAAAAAGAATTGTTGAAAGATCAGGATCGGGATCTTTCCT
TCCATATAAATTCATATAATTGGAATAGTGACTGGGTTTATATCACCCAT
ATATTCATTATGCTACTAGTTGCGAGTATGCATTTTCAGAGCAGTTGTAT
GTAGTATATACCCAATAATAAAAATTCTGACATTGTAGCACTCTTTGCTA
GCATAAAAAGATGCTAAGAGTAAGCCTAGGGAATTGCTTAAAGTAATCCC
TGTCGAGAGAGATCTTCGAAAGTTTTCTTATTAACGACATTTCCCACAGA
ATCTTCGAATTCTTCGTCCGCGTCAGGTTGGAACCTCTCTTTAGCTTTCT
CTTCTTTCAATTTCTCCCAAAGAGAAAGGGCGTCTTCGATCTTTGTGACG
TTTGCGAAATGCGCTGTGTTAGGTATGTTCAAAACACGCATACCATGCGC
ATGGCGCCACTCTGAGAAATGTCTTTGGAAAGCTTTTGGACCTCTGTATT
TCTGATTGCCACAAATTTCGCATGGGTAATAGAGATTCAAGCCGTGTAAT
TTGTAAAGCCAGTAGGGTATTGGTTTCCCGTCCCAGCC Run BLAST on NCBI protein sequence of TCONS_00009609-protein >TCONS_00009609-protein ID=TCONS_00009609-protein|Name=TCONS_00009609-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
MKFGVKSFIIAWLVALVQASYKPKEAKFLEPKEHKKVAGKEFLHLKGLSE
VQCVGHCTLTDDCHSVNHHGGDQICLVIDEPLEGVGDSHLVDARGWRYFK
KSKVNQTPRRKEFEMLDPIKPSTNMINVVPIQGSSWEISLEAIIYSRIDG
LQNDIITWTTGEPKDLGSRLPLITVGKAADKIFMMVHSSVHRNYNFQFEY
HKWYKFEVRQAAVGMNKILITFYVDGKERKRLVQPRGAFFTDVKCFVGGP
FIERTVVNGLIRNLKFIQSREKLTGFVPNLGHLIETLNVWPKEWFVHLNL
TIHATGTREAPTNSQSNVHENVLQFTTGANNGFYESRIPAIYIDSNLQDI
QTHVYTRTSQRELREKIFEVIYQLGRSYNISIEHRHVTGNQFQYHIKVNE
NEIKYDDFQTEDMYNVKVYASNPWYRVSNATIHFLEYGPLSQLN Run BLAST on NCBI transcript from alignment at sc0000097:611713..616519+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009609 ID=TCONS_00009609|Name=TCONS_00009609|organism=Clytia hemisphaerica|type=transcript|length=4807bp|location=Sequence derived from alignment at sc0000097:611713..616519+ (Clytia hemisphaerica)
TTTTGAATAGGATGAATATGAATGGCTTTGATGATTTGGATATTTTTAAT
TcagtttttacaattttcaataaataagaaataaattaGAGAAGAGTATC
AAACATAATATGAAGAAGGAAGGAGAAACATAAGTTTCGAAAGATCATGA
AACagtgtttaaaaaatgaagtttggaGTGAAGAGTTTTATTATCGCATG
GTTAGTAGCTTTAGTTCAAGCAAGTTACAAACCCAAAGAAGCGAAATTTC
TTGAACCAAAAGAACATAAGAAGGTTGCTGGTAAAGAGTTTCTTCATTTG
AAAGGTTTGAGTGAGGTACAATGTGTTGGTCATTGCACATTAACTGATGA
TTGCCATTCGGTGAACCACCATGGTGGTGACCAGATCTGCCTGGTGATTG
ATGAACCATTGGAAGGTGTTGGAGATTCTCATTTGGTCGATGCTCGTGGA
TGGAGATATTTCAAGAAAAGCAAGGTGATGTATATTGTTGTTGAACAGAG
AAGAGAGAAGCGGACCCTCCGATATAATCGGACCGGGTcctatcccggga
tagtttcctacccctagagagggaaatcacagcgcttaccagacattgta
ctctgtgctcgcgacacatcagagccgtgctgtatcgatgatgatactcG
CACAGTACGAGAGAACCTTGATGTTGTTGAAGATCATTTAATAAATTTGC
TTGATATTCGACTGTGCGTCGTATCATTGCCGTAAGGCACGAGTTATACA
GTACTTCTACAGTCCTTTCCTTTTTTGATTCCgacattttgaaataattc
cAACAAAAGCAAGGTGAATTATTCGTATCCCCATTATAATCAAGTCAGAT
AGAACTTGGCTCAATTCGAATGAAGTTACGGGATGATAGAGTGCTTCAAG
GAAATCATATTTTACACAGGTCTACATTAAATAATCAGGGCAGTTAGTCT
CTATATACAATAAGACCTGTTTGACAAGGCTTTTTTTTATTAGGATATTC
CTCTTTCGATTTTTAGGTGAATCAAACTCCAAGAAGAAAGGAGTTCGAAA
TGCTTGATCGTAAGtaaaagaatttaatttttttaattcaaaaaattcta
GCTTCGGccaaaaattttgtttccgGTAATGTAGGTGacgaaaaaagtat
aaaatattttttgaactaGGTTAGATTCTTGCAAGTGATTTAATAACCTA
ATTAATTCGCAACTTTTTTCATAACGCTAGAAAATGTCACATATTAAAGA
AATATAAAAGTATCTTTAGTAAAAAGGTTTCGCAGGGAACGAGTGAAGAC
GAAAAAAGTTCACCCGGTCGCTTTCctgaaaaaatgttattttttggtCT
ATTGGCTATTTAAACAGTTCTTCTGTTCCATTTTGTGGCTTGAATTATGT
GGAAATATACTGAATGCTTGCTTTTACCATAGCCATCAAACCATCAACTA
ACATGATTAACGTTGTGCCAATACAAGGTTCCTCATGGGAAATCTCACTC
GAAGCTATCATCTATAGCCGTATTGATGGCCTTCAAAATGACATCATTAC
ATGGACTACGGGAGAACCTAAGGATCTTGGCTCACGGTTACCTCTCATAA
CTGTCGGTAAAGCTGCCGATAAAATCTTCATGATGGTGCACAGTTCAGTA
CACAGAAACTACAATTTTCAATTCGAATATCACAAATGGTACAAATTTGA
AGTCAGACAAGCTGCAGTTGGGATGAACAAAATTTTAATCACTTTCTATG
TCGATGGTAAGGAAAGAAAGCGATTGGTACAACCAAGAGGTGCATTTTTC
ACTGATGTCAAATGCTTTGTGGGAGGTCCATTTATTGAGCGTACGGTAGT
CAATGGGTTAATccgaaacttgaaattcataCAAAGCCGGGAAAAATTGA
CaggtattattttttttaacaaaagttAGCTGTATCTAACCTGAAAAATA
TACAATccttgaaataattatttttcccCCTCATCTTCGGTGTTGATAGG
GAGTAAATGGAAGTTGCACGATTCCTCCCTCACATTGAAAGTTGGGGAGG
GCGACTCAGCAATGGGAAATCGGACAGTAGTTCTGTCCTCCATAGTAGAT
TCATAGTATCATCAGTTTAATTCCTTCACTTTCATCTGACATACGGTTTT
TATTCAGGGTTCGTACCAAATCTCGGACATTTGATCGAAACTCTGAATGT
TTGGCCGAAAGAATGGTTCGTGCACCTCAACCTGACAATCCACGCAACCG
GCACACGAGAAGCACCTACAAATTCACAAAGCAATGTTCATGAGAATGTC
CTACAATTTACAACTGGTGCAAACAATGGTTTTTACGAATCCAGGATTCC
AGCAATATATATAGATTCAAATCTTCAGGATATCCAAACTCACGTTTATA
CGCGAACCAGTCAGCGAGAACTCCGCGAAAAGATCTTCGAGGTGATTTAC
CAACTTGGGCGGTCGTACAACATCTCAATCGAACACCGGCATGTGACTGG
AAACCAGTTCCAATACCATATTAAGGTAAATGAAAACGAGATCAAATATG
ACGACTTTCAAACAGAAGATATGTACAATGTCAAAGTATACGCAAGTAAC
CCATGGTACAGAGTGAGCAACGCAACAATACATTTCCTGGAGTATGGACC
TTTGTCCCAACTTAACTAATCGAACAATAATCGAATTCGGTTTCTAATTA
AATCAATTAAATTCAatcgaaaaataaacaaatctaTTGGAATTGGATAA
GTTTAAAAattcgaaagaaaaattgagttTGACATTAAAAGTAAGAATAG
AAAAAATGGTTTACTTCAgatgaaaaaagaaacattttgcATTGTTTTTG
CAAGATCAGCACACAGCCCCGTGTTGTATACACATTgactttaataaaat
ctttttatggCGTTCGAAAATCAAACACATTTTAATTGAATGCTTATCGC
ATTTTAtcgaaaagttatcaaaaaataaCAACGTATAATATGAACAACAT
ACACCATGAATTAGCGGTACTATCTCTGTTTTCTCAAAGGACGTCTTTAT
AACTCGGTGATGAATAGGTTGATTGGCAATTGAGATTGAGATCTTTCGAT
TTCttcaatttattttgatatcGACTCATCAAtaacaataaagaaaaatg
aacaagCTATCatttgaacgaaaaaaaaaatcaattctcAATTCTTACCC
ACTTTTCACTTGTTAGTAAATAACATTTTGAGCACcaatctaaaaaaaga
aaattatatcGATTTGTAAATTAATTATTAATGAGGAGTGGTTAATGAAT
ATTTATGAAGGAGAGTATTTATTTTCATACATTCAGCAAgggataaaaat
gaaaacaactcCTCATGACACAAATTTTTAACCcctaaatgggcttttcc
agaaaaaagttttacccctccccctgttgaggatattaatttttcgaagt
atcgaaccccctggatatcctactttattagtaaagactaatcactctta
aaaatatgctcaaccccccctggatatcctctcttaaaaagatgcttacc
ctgaatatcgtattttttacttgaaaagacactttacccctggatatccc
tcccttgtagatatctaaccccctggatatccgatatcctcaacaggggg
cacggactatttctggaaaagcccaatccaAGGGTGGTGAAATTATATCA
GTATCAACAACTGTAAATATCCAAGATTAATACATAAAAGAACATTCATG
TTATAGAATTCAAGCAATTGTGAATAAATAATTCTTACTGTAAAACCACT
TGGTAGTGAAGTCTCTTAGAGAAGAAGTTCATCCAAATACCATTGCGTTG
AGTACGGTCATTcttaaccaaaacaaagcattttttgtttagttcttctg
aaatgaaaaagttagttAACTTTACATTGCACTTGTCAAGTTTTGCTTCA
AGACAAAAGATACAAGAGAATAAAGCATTAAAGTCAGATGAAACCTAATC
TCATTTTCCATATTTCTAAATCAATCAGCACATTTCTTGTTAAAGAAGTT
CTCGTATAATATTTTCTGGTATCTAGACACATTTAGAGTCAATACGATCT
AAAAAATAAACTGCATATCCAATGAAAGTTACTTGAGTTACTTTCCTACC
ATACTTGGCTGGTAAGATTTTAAAGTCCAAAGAAGGGTCAGTAAAAtcat
aaaacaagaaaaatccTCTTAAGTCGGTATAAAAAGAATTGTTGAAAGAT
CAGGATCGGGATCTTTCCTTCCATATAAATTCATATAATTGGAATAGTGA
CTGGGTTTATATCACCCATATATTCATTATGCTACTAGTTGCGAGTATGC
ATTTTCAGAGCAGTTGTATGTAGTATATACCCAATAATAAAAATTCTGAC
ATTGTAGCACTCTTTGCTAGCATAAAAAGATGCTAAGAGTAAGCCTAGGG
AATTGCTTAAAGTAATCCCTGTCGAGAGAGATCTTCGAAAGTTTTCTTAT
TAACGACATTTCCCACAGAATCTTCGAATTCTTCGTCCGCGTCAGGTTGG
AACCTCTCTTTAGCTTTCTCTTCTTTCAATTTCTCCCAAAGAGAAAGGGC
GTCTTCGATCTTTGTGACGTTTGCGAAATGCGCTGTGTTAGGTATGTTCA
AAACACGCATACCATGCGCATGGCGCCACTCTGAGAAATGTCTTTGGAAA
GCTTTTGGACCTCTGTATTTCTGATTGCCACAAATTTCGCATGGGTAATA
GAGATTCAAGCCGTGTAATTTGTAAAGCCAGTAGGGTATTGGTTTCCCGT
CCCAGCC Coding sequence (CDS) from alignment at sc0000097:611713..616519+ >TCONS_00009609 ID=TCONS_00009609|Name=TCONS_00009609|organism=Clytia hemisphaerica|type=CDS|length=5340bp|location=Sequence derived from alignment at sc0000097:611713..616519+ (Clytia hemisphaerica)
atgaagtttggaGTGAAGAGTTTTATTATCGCATGGTTAGTAGCTTTAGT
TCAAGCAAGTTACAAACCCAAAGAAGCGAAATTTCTTGAACCAAAAGAAC
ATAAGAAGGTTGCTGGTAAAGAGTTTCTTCATTTGAAAGGTTTGAGTGAG
GTACAATGTGTTGGTCATTGCACATTAACTGATGATTGCCATTCGGTGAA
CCACCATGGTGGTGACCAGATCTGCCTGGTGATTGATGAACCATTGGAAG
GTGTTGGAGATTCTCATTTGGTCGATGCTCGTGGATGGAGATATTTCAAG
AAAAGCAAGGTGAATCAAACTCCAAGAAGAAAGGAGTTCGAAATGCTTGA
TCCCATCAAACCATCAACTAACATGATTAACGTTGTGCCAATACAAGGTT
CCTCATGGGAAATCTCACTCGAAGCTATCATCTATAGCCGTATTGATGGC
CTTCAAAATGACATCATTACATGGACTACGGGAGAACCTAAGGATCTTGG
CTCACGGTTACCTCTCATAACTGTCGGTAAAGCTGCCGATAAAATCTTCA
TGATGGTGCACAGTTCAGTACACAGAAACTACAATTTTCAATTCGAATAT
CACAAATGGTACAAATTTGAAGTCAGACAAGCTGCAGTTGGGATGAACAA
AATTTTAATCACTTTCTATGTCGATGGTAAGGAAAGAAAGCGATTGGTAC
AACCAAGAGGTGCATTTTTCACTGATGTCAAATGCTTTGTGGGAGGTCCA
TTTATTGAGCGTACGGTAGTCAATGGGTTAATccgaaacttgaaattcat
aCAAAGCCGGGAAAAATTGACagGGTTCGTACCAAATCTCGGACATTTGA
TCGAAACTCTGAATGTTTGGCCGAAAGAATGGTTCGTGCACCTCAACCTG
ACAATCCACGCAACCGGCACACGAGAAGCACCTACAAATTCACAAAGCAA
TGTTCATGAGAATGTCCTACAATTTACAACTGGTGCAAACAATGGTTTTT
ACGAATCCAGGATTCCAGCAATATATATAGATTCAAATCTTCAGGATATC
CAAACTCACGTTTATACGCGAACCAGTCAGCGAGAACTCCGCGAAAAGAT
CTTCGAGGTGATTTACCAACTTGGGCGGTCGTACAACATCTCAATCGAAC
ACCGGCATGTGACTGGAAACCAGTTCCAATACCATATTAAGGTAAATGAA
AACGAGATCAAATATGACGACTTTCAAACAGAAGATATGTACAATGTCAA
AGTATACGCAAGTAACCCATGGTACAGAGTGAGCAACGCAACAATACATT
TCCTGGAGTATGGACCTTTGTCCCAACTTAACTAAatgaagtttggaGTG
AAGAGTTTTATTATCGCATGGTTAGTAGCTTTAGTTCAAGCAAGTTACAA
ACCCAAAGAAGCGAAATTTCTTGAACCAAAAGAACATAAGAAGGTTGCTG
GTAAAGAGTTTCTTCATTTGAAAGGTTTGAGTGAGGTACAATGTGTTGGT
CATTGCACATTAACTGATGATTGCCATTCGGTGAACCACCATGGTGGTGA
CCAGATCTGCCTGGTGATTGATGAACCATTGGAAGGTGTTGGAGATTCTC
ATTTGGTCGATGCTCGTGGATGGAGATATTTCAAGAAAAGCAAGGTGAAT
CAAACTCCAAGAAGAAAGGAGTTCGAAATGCTTGATCCCATCAAACCATC
AACTAACATGATTAACGTTGTGCCAATACAAGGTTCCTCATGGGAAATCT
CACTCGAAGCTATCATCTATAGCCGTATTGATGGCCTTCAAAATGACATC
ATTACATGGACTACGGGAGAACCTAAGGATCTTGGCTCACGGTTACCTCT
CATAACTGTCGGTAAAGCTGCCGATAAAATCTTCATGATGGTGCACAGTT
CAGTACACAGAAACTACAATTTTCAATTCGAATATCACAAATGGTACAAA
TTTGAAGTCAGACAAGCTGCAGTTGGGATGAACAAAATTTTAATCACTTT
CTATGTCGATGGTAAGGAAAGAAAGCGATTGGTACAACCAAGAGGTGCAT
TTTTCACTGATGTCAAATGCTTTGTGGGAGGTCCATTTATTGAGCGTACG
GTAGTCAATGGGTTAATccgaaacttgaaattcataCAAAGCCGGGAAAA
ATTGACagGGTTCGTACCAAATCTCGGACATTTGATCGAAACTCTGAATG
TTTGGCCGAAAGAATGGTTCGTGCACCTCAACCTGACAATCCACGCAACC
GGCACACGAGAAGCACCTACAAATTCACAAAGCAATGTTCATGAGAATGT
CCTACAATTTACAACTGGTGCAAACAATGGTTTTTACGAATCCAGGATTC
CAGCAATATATATAGATTCAAATCTTCAGGATATCCAAACTCACGTTTAT
ACGCGAACCAGTCAGCGAGAACTCCGCGAAAAGATCTTCGAGGTGATTTA
CCAACTTGGGCGGTCGTACAACATCTCAATCGAACACCGGCATGTGACTG
GAAACCAGTTCCAATACCATATTAAGGTAAATGAAAACGAGATCAAATAT
GACGACTTTCAAACAGAAGATATGTACAATGTCAAAGTATACGCAAGTAA
CCCATGGTACAGAGTGAGCAACGCAACAATACATTTCCTGGAGTATGGAC
CTTTGTCCCAACTTAACTAAatgaagtttggaGTGAAGAGTTTTATTATC
GCATGGTTAGTAGCTTTAGTTCAAGCAAGTTACAAACCCAAAGAAGCGAA
ATTTCTTGAACCAAAAGAACATAAGAAGGTTGCTGGTAAAGAGTTTCTTC
ATTTGAAAGGTTTGAGTGAGGTACAATGTGTTGGTCATTGCACATTAACT
GATGATTGCCATTCGGTGAACCACCATGGTGGTGACCAGATCTGCCTGGT
GATTGATGAACCATTGGAAGGTGTTGGAGATTCTCATTTGGTCGATGCTC
GTGGATGGAGATATTTCAAGAAAAGCAAGGTGAATCAAACTCCAAGAAGA
AAGGAGTTCGAAATGCTTGATCCCATCAAACCATCAACTAACATGATTAA
CGTTGTGCCAATACAAGGTTCCTCATGGGAAATCTCACTCGAAGCTATCA
TCTATAGCCGTATTGATGGCCTTCAAAATGACATCATTACATGGACTACG
GGAGAACCTAAGGATCTTGGCTCACGGTTACCTCTCATAACTGTCGGTAA
AGCTGCCGATAAAATCTTCATGATGGTGCACAGTTCAGTACACAGAAACT
ACAATTTTCAATTCGAATATCACAAATGGTACAAATTTGAAGTCAGACAA
GCTGCAGTTGGGATGAACAAAATTTTAATCACTTTCTATGTCGATGGTAA
GGAAAGAAAGCGATTGGTACAACCAAGAGGTGCATTTTTCACTGATGTCA
AATGCTTTGTGGGAGGTCCATTTATTGAGCGTACGGTAGTCAATGGGTTA
ATccgaaacttgaaattcataCAAAGCCGGGAAAAATTGACagGGTTCGT
ACCAAATCTCGGACATTTGATCGAAACTCTGAATGTTTGGCCGAAAGAAT
GGTTCGTGCACCTCAACCTGACAATCCACGCAACCGGCACACGAGAAGCA
CCTACAAATTCACAAAGCAATGTTCATGAGAATGTCCTACAATTTACAAC
TGGTGCAAACAATGGTTTTTACGAATCCAGGATTCCAGCAATATATATAG
ATTCAAATCTTCAGGATATCCAAACTCACGTTTATACGCGAACCAGTCAG
CGAGAACTCCGCGAAAAGATCTTCGAGGTGATTTACCAACTTGGGCGGTC
GTACAACATCTCAATCGAACACCGGCATGTGACTGGAAACCAGTTCCAAT
ACCATATTAAGGTAAATGAAAACGAGATCAAATATGACGACTTTCAAACA
GAAGATATGTACAATGTCAAAGTATACGCAAGTAACCCATGGTACAGAGT
GAGCAACGCAACAATACATTTCCTGGAGTATGGACCTTTGTCCCAACTTA
ACTAAatgaagtttggaGTGAAGAGTTTTATTATCGCATGGTTAGTAGCT
TTAGTTCAAGCAAGTTACAAACCCAAAGAAGCGAAATTTCTTGAACCAAA
AGAACATAAGAAGGTTGCTGGTAAAGAGTTTCTTCATTTGAAAGGTTTGA
GTGAGGTACAATGTGTTGGTCATTGCACATTAACTGATGATTGCCATTCG
GTGAACCACCATGGTGGTGACCAGATCTGCCTGGTGATTGATGAACCATT
GGAAGGTGTTGGAGATTCTCATTTGGTCGATGCTCGTGGATGGAGATATT
TCAAGAAAAGCAAGGTGAATCAAACTCCAAGAAGAAAGGAGTTCGAAATG
CTTGATCCCATCAAACCATCAACTAACATGATTAACGTTGTGCCAATACA
AGGTTCCTCATGGGAAATCTCACTCGAAGCTATCATCTATAGCCGTATTG
ATGGCCTTCAAAATGACATCATTACATGGACTACGGGAGAACCTAAGGAT
CTTGGCTCACGGTTACCTCTCATAACTGTCGGTAAAGCTGCCGATAAAAT
CTTCATGATGGTGCACAGTTCAGTACACAGAAACTACAATTTTCAATTCG
AATATCACAAATGGTACAAATTTGAAGTCAGACAAGCTGCAGTTGGGATG
AACAAAATTTTAATCACTTTCTATGTCGATGGTAAGGAAAGAAAGCGATT
GGTACAACCAAGAGGTGCATTTTTCACTGATGTCAAATGCTTTGTGGGAG
GTCCATTTATTGAGCGTACGGTAGTCAATGGGTTAATccgaaacttgaaa
ttcataCAAAGCCGGGAAAAATTGACagGGTTCGTACCAAATCTCGGACA
TTTGATCGAAACTCTGAATGTTTGGCCGAAAGAATGGTTCGTGCACCTCA
ACCTGACAATCCACGCAACCGGCACACGAGAAGCACCTACAAATTCACAA
AGCAATGTTCATGAGAATGTCCTACAATTTACAACTGGTGCAAACAATGG
TTTTTACGAATCCAGGATTCCAGCAATATATATAGATTCAAATCTTCAGG
ATATCCAAACTCACGTTTATACGCGAACCAGTCAGCGAGAACTCCGCGAA
AAGATCTTCGAGGTGATTTACCAACTTGGGCGGTCGTACAACATCTCAAT
CGAACACCGGCATGTGACTGGAAACCAGTTCCAATACCATATTAAGGTAA
ATGAAAACGAGATCAAATATGACGACTTTCAAACAGAAGATATGTACAAT
GTCAAAGTATACGCAAGTAACCCATGGTACAGAGTGAGCAACGCAACAAT
ACATTTCCTGGAGTATGGACCTTTGTCCCAACTTAACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009609-exon-sc0000097-1491911889:611713..612186 | TCONS_00009609-exon-sc0000097-1491911889:611713..612186 | Clytia hemisphaerica | exon |
| TCONS_00009609-exon-sc0000097-1510915933:611713..612186 | TCONS_00009609-exon-sc0000097-1510915933:611713..612186 | Clytia hemisphaerica | exon |
| TCONS_00009609-exon-sc0000097-1575043694:611713..612186 | TCONS_00009609-exon-sc0000097-1575043694:611713..612186 | Clytia hemisphaerica | exon |
| TCONS_00009609-exon-sc0000097-1491911889:612729..612771 | TCONS_00009609-exon-sc0000097-1491911889:612729..612771 | Clytia hemisphaerica | exon |
| TCONS_00009609-exon-sc0000097-1510915933:612729..612771 | TCONS_00009609-exon-sc0000097-1510915933:612729..612771 | Clytia hemisphaerica | exon |
| TCONS_00009609-exon-sc0000097-1575043694:612729..612771 | TCONS_00009609-exon-sc0000097-1575043694:612729..612771 | Clytia hemisphaerica | exon |
| TCONS_00009609-exon-sc0000097-1491911889:613145..613615 | TCONS_00009609-exon-sc0000097-1491911889:613145..613615 | Clytia hemisphaerica | exon |
| TCONS_00009609-exon-sc0000097-1510915933:613145..613615 | TCONS_00009609-exon-sc0000097-1510915933:613145..613615 | Clytia hemisphaerica | exon |
| TCONS_00009609-exon-sc0000097-1575043694:613145..613615 | TCONS_00009609-exon-sc0000097-1575043694:613145..613615 | Clytia hemisphaerica | exon |
| TCONS_00009609-exon-sc0000097-1491911889:613870..616519 | TCONS_00009609-exon-sc0000097-1491911889:613870..616519 | Clytia hemisphaerica | exon |
| TCONS_00009609-exon-sc0000097-1510915933:613870..616519 | TCONS_00009609-exon-sc0000097-1510915933:613870..616519 | Clytia hemisphaerica | exon |
| TCONS_00009609-exon-sc0000097-1575043694:613870..616519 | TCONS_00009609-exon-sc0000097-1575043694:613870..616519 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000097 | supercontig | sc0000097:611713..616519 + |
Blast
BLAST of TCONS_00009609 vs. Swiss-Prot (Human)
Match: SF3A3 (Splicing factor 3A subunit 3 OS=Homo sapiens GN=SF3A3 PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 5.980e-54 Identity = 95/116 (81.90%), Postives = 104/116 (89.66%), Query Frame = -1
Query: 3291 GWDGKPIPYWLYKLHGLNLYYPCEICGNQKYRGPKAFQRHFSEWRHAHGMRVLNIPNTAHFANVTKIEDALSLWXXXXXXXXXERFQPDADEEFEDSVGNVVNKKTFEDLSRQGLL 3638
GWDGKPIPYWLYKLHGLN+ Y CEICGN YRGPKAFQRHF+EWRHAHGMR L IPNTAHFANVT+IEDA+SLW KLK +KA ER+QPD +EE+EDS GNVVNKKT+EDL RQGLL
Sbjct: 386 GWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
The following BLAST results are available for this feature:
|
