TCONS_00009604 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009604
Unique NameTCONS_00009604
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length802

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009604 ID=TCONS_00009604|Name=TCONS_00009604|organism=Clytia hemisphaerica|type=transcript|length=802bp
gtcggaattagggAAGAAGTTATATCAGATCGCCCAGCCAAAGaaattac
aaaatggTGGAAGAATCTAATATTGGATGCGTTGTCAACGTCGACAAATG
GCTGAAGGAAAATGAGGAGAGTTTCAAGCCACCTGTTTGTAACAGCATCA
TggCAGGTGGCTATTTGAAGATCATGTTTGTTGGAGGACCGAACGTTCGA
AAGGATTACCATATGGACCAAGGAGAAGAGTTATTTTACATGTTGAAAGG
CGATATGTGTTTGAAGATCATGGAGAAGGGCGAACCTAAAGACATCCATA
TTCGTGAAGGAGAAGTTTTTGTGTTACCTTCACGTATCCCACACTCGCCG
CAAAGAAACGCAAACACTCTTGGATTGGTCATCGAAAGGGAAAGAGCGGA
TCAATGGGACGGGTTAAGGTATTACTGTGAAGACGGGAAGACGatcttat
ttcaaaaatatttccattTGCGCTCGTTGGTTCAAGATTTTCTTCCTGTT
ATCAAAGAATATTTTGCGTCGGAGCAATACAAAACTGGTGTCCCTATACC
AGGAACAACAGACGAAGACGAAGAAAAATTCAAAGTCGATCGAACGTCTA
CCGTTAATACGCCTTTCCTTTTATCTGAGTGGGTGAAAGAAAACCGAAAA
GAGTTGGATAATCAAGGTAAAGTGTTGTTCGAACAAGGAGAGTTCAAGGT
TTATGCTAATGGTGAAGGTAACTTTTCACAACAAAACCCTTTTGAATCAT
GGATCTGGTTGATGAATGGTAAATGCAAGTTGCAAATTGATGGTCAAACT
GC
Run BLAST on NCBI

transcript from alignment at sc0000097:560031..578364+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009604 ID=TCONS_00009604|Name=TCONS_00009604|organism=Clytia hemisphaerica|type=transcript|length=18334bp|location=Sequence derived from alignment at sc0000097:560031..578364+ (Clytia hemisphaerica)
gtcggaattagggAAGAAGTTATATCAGATCGCCCAGCCAAAGGTacatt
catgtttttattttagtttcttatctctgatccttttttctgactgtctg
agtttctgagacttagtttctcaatTCTGACTAAGTTTTCATACCTGTAT
CATATTTTGACCAACCACATCATCGCACCATGCAGGGTTCAAACCACCat
caaagaaagaccttcggatTTGGAAACCAACGCCTTATCCGTTTAGCCAT
CGTCGCACAACAAATCCaggcaattcataacatattataccgaactggca
aaagacgggggtaatgttattataatgtgggtaaaagtacccctttttta
aacctgactgaaatttgaGCTGTTAccagcaaccctgaccctacctaact
gttagttaatcaattccaaacagcgaaagtaaatgtctttaaaaattcta
ggaagggccatttgcgaaagtttatgctcgtgaaaaattcttgacagaAT
Agcatagaaaatctgtaaaacttcaaactctgaataaaatgtaactttta
tggcacctTTTAGCAGTGCGTtacaaacagccatataaacaaaactcaac
attctcacaataagttgtctttttgatttcccaaacattcgtctcaagcg
ttcccttacacaataatttatgtaattgcaattgcggtcagtccacagtc
ggcttcaacatatacacgtgtttttatttacgtgaccgaagtgcctacta
aaacaatccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNaatgtttcaagccaatccgagaagtattt
gtccctctaagccattttttcacgtgaaaattctcaattttacgtcttaa
ttcgcgaaagtttatgctcgcaaaaatatttttccgttaaattcgcgaaa
gtaaatgtcatgaattacgcaattttttgtcctcacgaaagtttctgcta
gcgaaagtttgtacgcctaaagtaggtaaaagattgCTCAAGCAGATATt
tgtaaaagactgatttttcaGCTCAAAGAACGcgtctttatctataagaa
tcactattaataagcatacatcaatgttcaaatgttcttagccaaattac
tcaattttttgatgggatagatgttttttgcgaagtcttgaatatgaaag
aatatttcaagagcatgaaattttgatttctgaatgtttttttataagaa
acaaatgactaattttaatagatcgtcactatttgtgttctgaatgattg
tttaatggtcacgctcacgtagatatcaattatatatgtgttaaatgcat
aaccaggtaggtccataaaagaatcacttgtttttttttgtattttgacc
agttatgtcttatgtgtttcattgtttcaatgttcattgattagtcttat
ataaccaggtaggtccataaaagtatcacttgttttgctttgtttttatt
acaattttaggCCTAGTCTTGTAGTCTTGTAGTCTTGTAATCTTGGTTTT
ATCACATTACCTTCTACCATGATTTTGATCTCAGCCTTGTCTTGGTCACA
TTGTCAGAGACTTTAGATTCATTTTTACTCCAattgatttatttaaattt
tatgttCCATCTCCACATCAGCAATCAGTTGGGTTtaacagtatagacct
aactcttcatacaaaaattacgggaaacacatatttgaactttgtaccct
atgctgcacgcaagcacttaagctaaagttccacaaaagcgggacaaaaa
tcagtttcttgaagtttgcaaaaaaacccCACAtaagaagatctttcaaa
ttcagtatgtgaatagagcagtaaaaaatacaaattttctatttttcctt
ttttttgcaaaagttccagaaatgaaaataaagggataataattaattga
atactattctctgatgatccgcggcactatcgtaaagctagaattgcttc
GCGTCTTTTCGCTTGAGAAGATGATTgaaagattaaagtttttcacccgc
acGAAAACGGCGGGCGTTCTGGGAGCGTTCTTGACTCAATCCTTGGACTg
cgcgctaaaatggtagacaaagctatggcagatcatttcgatggaagttg
ttggaatgtttacaaggctcttgaccagtcagggcctccttggtctttta
taacattagttcggatagaataaaaacatacctagggtagatcgtcaaat
ggcaaagtcaaaaaattcaaagtgtagtatttttttgtgaaaatttaatc
tattggaagacattttgcgcaaattttaacctcctaggtaaaaaatccag
cattccccaggggggtctttgattcgcactaaagcgaaaaatgagtaaat
atggcattttttgcccattttaagactataaaaggccagtaaagggtcaa
aatggtttctaaatggtgtcttgtactaatattcaacacaaaaagacaaa
ataaccccagcgagatcgctcaatgtttcaatttcaggctaaaaaggctg
attttctccgattctgggtagcaaaatgcatgaaagcagcattttttaac
aacttttaaactttttaaggtacacacttgaaattttcaacaatgaaaca
cttcagagaaagctccaggaaaaatcaaacttgagttttcaaaaatttcc
tataaatccataatggcgccctagaaattgagttttcatgctaaatgcca
atatttcaagctaaaacttggttttcttgggctaaaatctcaaaaatgat
ttcacATGATGTCCTAGAATCTTTGGATCttggaagtattctgaaaatac
tctgggagaatcaaaatggtttgggtggtcagaaatttgccctagtcggc
cattatggtattgcatttccaaCTAAAACCCGATAGAgataaagtctaat
tttctcaggctacaATCTcagaatcttgtgttctctgtgttctNgatgga
aaaaaataaattctaaaatagtaaacctgaatcttgtgttttctgtgttc
ttgtgtccccacgatgggaaaaataaattctaaaatgtgactccccaagc
gatctGGAGTACACAAAAGTCCGATCGGTCTTATTACCGTTCCTCTTTGG
CCTCTATTGGACCGGTCTTTTTACCGCTAAGGCCGTTCAAAAATCGAAAG
AGGCCGATGCATGGCCGATCATGAAAAGCGGCCATGNTGTCCACtacgat
gggaaaaataaattctaaaatagtaagactgaatcttgtgttctctgtgt
tcttgtgtccaccacgatggaaaaaaatatattctaaaatagtaaacctg
aatcttgtgttttctgtgttcttgtgtccccacaatgggaaaaataaatt
ctaaaatagtaagacagAATCtggtgttctctgtgttcttgtgtccacta
cGATGGGAAAAATCNTTCTTCACCACGGCCTCGATGGTTTGTTTAATCAT
GGTATCTGTCGCCAAAGGTAGATTGTCAATATCTGTAGATGTGGAACAAT
TGGAATATATACCAATTGAACGAAAAGATAATTGCTGCTTCTCCGAGAAG
ACGAAGCTAGCCAGCATTATGAGGTAGATTAAAATGGTCATTTCCatgtg
gattttttttttttgattgctCACGAAAGCAATAATTTATCTTCTTTATT
TATGTTCTGTTCGCCTCAAATCCATTACCTCATCCCTTCGATCCTTTGCG
TAAGCATAAATTGGATACTTTCAAAGTGAACTTTACACTATAGTCAGTTT
CCTCTTACATtagaattttacttttttctaactttcttccaagatttTTG
GGAAGTAGAAATAGTTTATTCAATTCACCTGTCTTTTATTTAATAGGCAA
ACATGACTGAACAGAGGTTTCATTGATTCTGTTTTGGAAAATCCTATATT
AATTTAGAATAAAACAAATCTATGGATTTCAATATTTCCATTTTTGTTGT
TATTGCTTTGTGAATATTCAAAAATAGTAatttaataataaataaaaagt
ttctattttgaaaagattCAATCGTGAATGTTATTAAAATTATGTATTTT
GTAAGCTGGATTCTCTTACAACAACGAAATAAAACCTTTCTATATCCATA
AGTTGagtattctttctttttctaagCAACGGAAATCCCCCACAACCTAC
GGTAAGAGGGAGAACAATGTTGCAATCACCCATATCAGATTGTTTGAACC
TTTTGGCCCCTCTTTTGAGAAACACTCTAAAGTTTGCTGGTGATTTTCTC
ttattaaatattaaaataatcaATAAACTATATTTTCAGTCTAcacaatc
aaaaattaaaatcagctcttttcttttatttcatgGCTGTTTATTTTCat
atatgtgactccccaagcgatttagAGTACACAAAAGTCCGATCGGTCTA
ATTACCGTTCCTCTTTGGCCTCTATTGGGCCGGTCTTTTTACCTCTAAGG
CCGTTCAAAAATCGAAAGAGGCCGATGCATGACCGATCATGTAGCGGCCA
TAACGAAGAGGCTTTGAGGCCCCTAAAGGGGCCCGAGCGGTCCAATGCCC
AGTACGCTTCCTCCCGGTGGCCGCTATTGATttctttacttacttacttt
tacttgttttcgaaaatgtaaacattgagtTCGTTTCTTGGAAAACGAGT
TGCCGTGTGTTGTGAAATTGGAAAGTAAGATTTTCTTCTTGTAGTTTTAA
ATCgtttggattttattttgatatggTAGACATTTTTAACAACCGCTCTC
AACACTTTATCGATACGATTAAATTATCGATTCTATCGATACACTTATTG
ATACATAACATAGGCCTATCGATAGACTTTTATCGATAAGAATTTAATGA
TCCCAAACAAACTTGTTTTTCTTCGTATGTTTTAACAAGAATAGTCAACT
AATATTAACTCGTTTTTTACATTGCTTTCACAAGTATCTCTCATGCTTGG
TTTTTCtgaatttgatttctttgtAGCGTTTAAATGCGTCTGttatgctt
agttttatcaactGACTTTCTTCGTAATTTTCACGAACGTCTcttatgct
tagttttatcaactcgctttcttcgtaattttAACGAGCGTCTCTTATGC
AtagttttatcaactcgctttcttcgtaattttCACGAACGTCTTTTTTC
CttagttttatcaactcgcttagttttatcaactcgctttctctGTAATT
TTTACGAGCATCTcttatgcttagttttatcaattcgctttctttgtaac
ttttacaAACGTCTCGCGACCAATTGCTTCGGTACAACCTTATCATTTTT
AGCGATAGAATTTATCGatagaattttttaacaataaaacttTATCGAGA
AAGATTTTCCAATGATATATTTCATAGAACTTCCTTATCGATACAAAATA
GCCTATCGATAAAGAATCTGTAGTTATCGATAAAATAAATCAAGCTATCG
ATAATTTTACTATCGATACACCTTTTCAACATATCTTAATCATATATGGC
TCATATCGAAAGATTTTAAAATGCTAAACGTTATTGACGTCTCTTCAATT
TTACCTTCTGAAAAAGATCGTACTTTTGAGGATTGAGTAGTTTTTTAGAA
CCGGACTTTTTTGGACCGGACTTTCGACCGCTCTAGACGCCGCTCGGAAG
TCTCTTGCTCAAGAAGGGCCGCTAAAAGAGCGGCCTCAAGCGGACCTTTC
AAAAATTCTCTCGCCCACTTTGAGGCCGATCTTCACGAATGATGGGCCGC
TAAAGATTTTACTTCGGCCGCTTTAAGACCGGGATTTTACCCGCTTTTGG
CCGATCGGTCTTttgtgtactccaaatcgcttgagGAGTCacaaatagta
agactgaatcttgtgttctctgtgttcttgtgtccaccacgatgggaaaa
ataaattctaaaataataaagctgaatcttgtgttctatGTGTCCTGTGT
CCACtacgatgggaaaaataaattctaaaatagtaaacctgaatcttgtg
ttctctgtgttcttgtgtccaccacgatggaaaaaaataaattctaaaat
agtaaacctgaatcttgtgttttctgtgttcttgtgtccccacgatggga
aaaataaattctaaaatagtaagcctgaatcttgtgttctctgtgttctt
gtgtccaccacgatgggaaaaataaattctaaaataataaagctgaatct
tgtgttctatgtgttcttgtgtccccacgatgggaaaaataaattctaaa
atagtaagactgaatcttgtgttctctgtgttcttgtgtccaccgcAATG
GGAAAAGTAAATTCTAAAATACTAAGGCTGAATCTTGTGtcctctgtgtt
cttgtgtccaccacgatgggaaaaataaattctaaaataataaagctgaa
tcttgtgttctatGTGTTCCTGTGTCCACtacgatgggaaaaataaattc
taaaatagtaagactgaatcttgtgttctctgtgttcttgtgtccaccat
aatagaaaaaataaattctaaaatagtaagactgaatcttgtgttctctg
tgttcttgtgtccactgcaatgggaaaaataaatttcaaaatagtaagac
tgaatcatgtgttctctgtgttcttgtgtccactgcaatgggaaaaataa
atttcaaaatagtaagactgaatcatgtgttctctgtgttcttgtgtcca
ctgcaatgggaaaaataaatttcaaaatagtaagactgaatcatgtgttc
tctgtgttcttgtgtccactgcaatgggaaaaataaatttcaaaatagta
agactgaatcatgtgttctctgtgttcttgtgtccactgcaatgggaaaa
ataaatttcaaaatagtaagactgaatcatgtgttctctgtgttcttgtg
tccactgcaatgggaaaaataaatttcaaaatagtaagactgaatcatgt
gttctctgtgttcttgtgtccactgcaatgggaaaaataaatttcaaaat
agtaagactgaatcatgtgttctctgtgttcttgtgtccactgcaatggg
aaaaataaatttcaaaatagtaagactgaatcatgtgttctctgtgttct
tgtgtccactgcaatgggaaaaataaatttcaaaatagtaagactgaatc
atgtgttctctgtgttcttgtgtccactgcaatgggaaaaataaatttca
aaatagtaagactgaatcatgtgttctctgtgttcttgtgtccactgcaa
tgggaaaaataaatttcaaaatagtaagactgaatcatgtgttctctgtg
ttcttgtgtccactgcaatgggaaaaataaatttcaaaatagtaagactg
aatcatgtgttctctgtgttcttgtgtccactgcaatgggaaaaataaat
ttcaaaatagtaagactgaatcatgtgttctctgtgttcttgtgtccact
gcaatgggaaaaataaatttcaaaatagtaagactgaatcatgtgttctc
tgtgttcttgtgtccactgcaatgggaaaaataaatttcaaaatagtaag
actgaatcatgtgttctctgtgttcttgtgtccactgcaatgggaaaaat
aaatttcaaaatagtaagactgaatcttgtgttctctgtgttcttgtgtc
cactgcaatgggaaaaataaattctaaaatagtaagactgaatcttgtgt
tttctgtgttcttgtgtccactgtaatgggaaaaataaattctaaaatag
taaggctgaatcttgtgttcttgtgtccaccacgatgggaaaaataaatt
ttaaaatagtaagactgaatcttgtgttctctgtgttcttgtgtcccaac
gataggaaaaataaatttgatagtAAGACAGAAGACTAACCATCCtagac
aaagctagaacataaAAATCCAGAAAATCACAGCGCTAtgacaaataaaa
aagaaatacagaTATGTCTATAAAAACGGTTCAAAATTCATAAACCCCTC
AACAACATTTTTCCATcagacacaagaacacagagaacacaagatttgga
tttggaaattctgtaattgataaaatcggacacaagaacacagagaacac
aagatttggatttggaaattctgtaattgataaaatcggacacaagaaca
cagagaacacaagattggatttggaaattctgtaattgattaaatcggac
acaagaacacagagaacacaagattcagtaccattttatttaaaatttat
ttttgccatcgcggacacaagaacacggagaacacaagattcgGATTTGA
ATTCTGAAATTTATCAACTTTGAATTAGAATACGGAATTAATAGCCtgaa
tctttgataataattagcctggatctttgaaaaaatggataGCCAATGAG
ATTCGAGCTTTACTTCTTCACCACTACTGTTCCCACTacaacgcaatatt
tagagctaaactctaattttctcaggctaattatctcaaaagtggtttca
aataggatcctgaaatcttttggtgttgaaagtattctggaaatactctg
ggaaaaccaaaatggttttggtcagaaatttgccaaagtctgccattatg
gaattgtatttcattctaaaacacaatgttttgagtaagcttgagtgttc
ttcataaagaaataaaattcataatggcagactttactttggcatatata
tgaccattgtgaaccattgtgattttccttgagtgttcccaggatacttt
caacaccaaaagatttcaggaccctatttgaaaaactgaaaaactgtata
tcaaaaacgtctaaaaatacctaatttgataccccttttttacctttttt
ttacactttccgaaaagtgaattttgagtttaaaagctcataactaggga
acttgtgcgtcaaatttaaaaactaATGGCTCGGATTTTAAGTTAGgata
tctactttctaaataataaaactccaagcactttgggacatttgttcggc
ctcaagacgccgagaaacgtccgaactttttcgtgggtcacccggtacta
TGACCTAATAGGAGTCAAATATCTTAGTATATTAAGAGGTTTTAGTATAA
TTTGTGGTCTTAGTATGGTATTGTTaaacaggctagctctaaagctctaa
aacagcatctaataacatgagaACCAGAATATGGTTTTTCAATGgcaatc
aaaactataaagtgcacttacaaacatcaatttcactttcgatttcaagc
aaaggtcttagcaacgcgCGTACATAGCAATGGGGTTGGGAAGAAAAATC
TAACGTTATGGTCAATATTCAACATATTATTCTAAGTATTAAAGTATATA
CTTGAAGCCATAATTTGTCAACTTTCAAAACTGGACTGAATTGCAATtgt
ttttttcatcttcttggTACAAACAGTGaaatttcatagattttttttcg
aagaGGTACATGGATTTGTTCAGGGAGAAGTTACCCTATGACCTCAGAAC
TACTTTTCTACCGAATTTAGCCTCTCCCAACAATTTCAATCTAAATTCAA
AGCTAATTTCTAAGTTTTCAAGTTCATTCAATACATAGTTTTTGCCACTT
TTAGGTTTTCTAgatcaacatttttttcttaaaatttcacaTTCTTTGAA
GGATTACTTGGCTTTTTAACTATCTTATTATGTAATTCATAGTGTCAACC
TCCTGACTTTTGGGTGGGGGTTTACacccaaaaaattgcaaataaaacat
aaaactggGAGCTAAAATACTGTTTTCACTTGTGTGATGGCAATCTTAAA
TTAACCATTATAGTCAATAGAATAGAAATGTGATTTTCCTAAAAACGATA
TTAAACcaacaaatattttatactAGGTATAGGATTGGGGGctgcttaaa
tttttttttatatttggggACCTAAGTAgatttttttgcctgggacctag
acCTGGGCTGAAAGAAATCaccattttttaccttttttaaagaATCTTTT
CAACAAGAATTAATTCATCAATACATCAAATCCACTAAAATGAgataaac
ttttgcggggaatgaatttttcagttgagctcatccgcaaaattttaaga
ttttgcagATGGCACTATTGGCAgataatattttcacgattttgtgcctT
TTACTGCCAAATCATGCATGATAGTTGGTGaaaatacgcattattagtGC
TTCTTTCATGCCAGTAGACAGTAAAAGAACAGTTTATTTCTTGATTCTTT
TgagttttgttcaaaaatattttgcagataAGGTCTTTCCTAATTTGGAT
TGGGACCTAATTTTGCGGATGACATACCCAAATCCACGAAATCTGCAaga
tttaatccccgcaaaattttatcccattataCAGTAAAGTACTAAAAATT
TATTAACTTGGTTgagatttcatttttgatttttttttgggggggacaAG
GCCTGTAAAGGTTGGTTATTGccaaattttgttgaaaatcagTTACTTCT
AACACAATATTCCTCTTTATCTTTGTTTGTGTAGCTTTGGTATTTAAAAT
CTCTCATATTTTTAGTATTAACAACATTCTTTTGAGGTTtctttagtttg
ttcttttttttaggtttttatgtCCTTCCATGTTATACGGTCTTTCAAGG
TTCATAAATATCATGAGTCCTTTCAGACTTTAAGATCAGAGTTTGATGTG
TTTTTCCCTGCATTTTAATTACTCAGGGTCTCAATTACAATATTTGAAAT
TATCAAGATTTATAAGTTATGATTATTGATCTCTTATTTCTAAAAGTATT
CTAAAATAATGTCAAACCTATTAACAAGAATTTGTTGTCGGAACAACATT
GGAACTCATTTGAATTTTGCAAAACGTTGCTTTTCTGTTGGAGCATGTCA
ACGTGGGTTCGAAGAATTTTTTCCACCAGGTGTTTACGAGGGGAAAAATT
ATGTGGAAGAGGAACCGGTCGTCGGACGACGTTGGAAAATCTCTGAACTG
CGTATTCGAAGTAATACTGACTTACATAAATTTTGGTATGTTTTATTAAA
GGAGAAAAACATGTtattgacattagaccaagaaTGTAAAAGACTTGGTG
TTTTCGTTCCAGGACCAACTCGCTTACACAAAGTGGAACAATCTATGGAC
CTTGTTGAGAAGGTAATAAATGAACGTCACCATGCTATCATGAAGTTAGA
AAAGGAGCGAAAAtataaatttgatgaagaagaagaaaatgaggatttgt
tgaatttcaatgataCAGATTCGTTGACCACAGAACAATCTTTTGAAGAA
TCACGTGATAACACTAAAAAGGAGCAAAATGCAAACACTGTATaaagtta
gatttttttaacatagaaaaataataataaattgAGATGTGAGCAGATGT
GAGTGAATATACTCTTTAGAAAATATCCTGTCTTTAAGTATGTCTCAGGT
CAAATATACCCTTCGCTACTGGCCAATCTTGCTAatgtttttctttatct
ttctgGTTTACTTTCATAAGTGTGAGGTAAAGTCCAAACCAGAACTTGTT
CTGGTCCTTGAATTTACCTATAGTTCAAATAGCTTATTTTAAAGCTTGCA
GATAAGAAAAGTCTGCTGTTAGAAGTCTATGAAAGTAACATTTTATTCCA
CATTTATGAAAGTAACACCAATTGATGTCTTATACTGAGTAATAATAGCT
CAACTTATTATAATTTGAGAGAGCGATACTAGGACTTCTCATTATGTGTT
TATTGTCAAAATAAATGTCATAGAGAAACTTGGAATTCCATTTTATATGT
AACtgttttcaaattaatttcacaacaagtttttttcaatcaatgtcAAT
GGTTCTGCGAATCTCATAATATTAAGCTGGCGAGGTTGAAACTTTGCTCT
CCGTGCGTTTTATGGTTTTGCATTGTTTTGAAAActtctattatttttca
tggGAATTCGATTAATTCCAAACAGAATGATTGCTCATAATATGTAACGT
TTCTTCTTATATTTTATgcatgtcaaaaaaaagaaattacaaaatggTGG
AAGAATCTAATATTGGATGCGTTGTCAACGTCGACAAATGGCTGAAGGAA
AATGAGGAGAGTTTCAAGCCACCTGTTTGTAACAGCATCATGTATGTCCA
GGTTATTTAAAGTCCACTATCATTGTTTGGTCAAGTATTCATCTTTTTGT
CATGCTTgagattttgataaatataatcATAGAGGTCCTGGAtgtaaaaa
cactttttaacCCATTATTTTTCCTTGCTACCtttaattgaaaaattgga
aactGATGCAAAAATCTATTTAGTAAATGTACTATTTTCTAAGAAAAACC
GAAATCAAAACCAAACAATTTTACGGTCTCGAAATCTCTTTTATCGTAAA
AAGCTGGAAGTTAGAAGCCTGGAAACAACACGTTTTACTTATAAGAATGT
TTTTGCTACTAGCCTTTTCAGATTCTGTTAGATTTGCATGGAACAAGTAG
CAATTACGTCTGGTTTTTTCATAAAGAcagttctttttgttttgaagggC
AGGTGGCTATTTGAAGATCATGTTTGTTGGAGGACCGAACGTTCGAAAGG
ATTACCATATGGACCAAGGAGAAGAGGTACACAATAGATATTCTTTCGGC
CATCTCAATAGTTATCTTTTTCGAAAGAGGGAAGGAGAACTTTGCGACAT
CAATGATATGAACAATTTTAAGGGGTTAAGGTTGAATTATTGTCATCTTA
TCATTCGAACTATTCTATTGTTAGCCGGTTTGGCGGTGACGGGCCTACTA
CACTAAGATATTGAATATTACATAGGCAccattcttcttcatttttatga
cgtcagaaatttatttcatttgttttttctcttttccaCTGTATTTTCGC
GATAaagcattgaaaattgaaagaaactcaAGGAAACATTGAACAAATAC
AATACTAACCGGTTTAGGTCGGGCTCTAATTATTGCCCGAAATCAAATAA
ACTACAGAGCATTGATGACCGAATATTTCTTAGTTATTTTACATGTTGAA
AGGCGATATGTGTTTGAAGATCATGGAGAAGGGCGAACCTAAAGACATCC
ATATTCGTGAAGGAGAAGTAAGCTCTCTATCAGGTCTTTACTCATCATCA
AGAATTTCTTTAATACATTTTACATTCATAAGAGTATGCATCCCTGCAAA
CTCGAGTGGCTTCTGAAAAGTTAATTTTTACCAAACCATTTAGGTCATAA
CTACTTACCTACTAACCTactttaaattcaaaaagtgAGGAGAATGTATT
GTAGGTTAAGGGAAACTTGCAACTTTCTAAAAGCTTAAGTTCTGTTCTGA
AGAGATCACTTTATTATTTCAGGTTTTTGTGTTACCTTCACGTATCCCAC
ACTCGCCGCAAAGAAACGCAAACACTCTTGGATTGGTATGCTGAAGCAAT
TATTTGGGTTGGAAAATATTGATGAGAGATAGCTTCATAAAATCATGTGG
CCCAAATGAAGAATTTTATCACAAAGTGAAGAATCGAATTGAAAAATAAC
CGAGCGTTTTTTGGGAGATAACTATGAGATTGGTAACCTTGGAGGatagt
ttaaaaattttcgattACCTCGAGATAAAAAAGTGGTTGAACAACGTGTA
ATCATTACATCTCCTTGAGCACTTTGTGAAGGACTTTAATTTCAAGGCTT
AACGAAATTCAAAGGTTGAATTGTATACCTTCTAAGTGAATACtaattga
aaatattataaTAATTCTTTACCCCTTTCTATAGGTCATCGAAAGGGAAA
GAGCGGATCAATGGGACGGGTTAAGGTAACAAATATTCAGTTTTGCTTGT
TGTACTGTAGttaacaaaattttgttggtttgtGAGCTGAAGTATTTGGT
CGAATCATGCATTTGCTTTCTGTATTAAATTACACCTACTCTCGCTTGGA
ATCTTTTTATAATGCTGCAGTGGTGGAAATAGCGGTCAGTTATTGGTTAA
AACCGACCAGAAATAAAACAACACcgacacaaaaagtttcaaatttaaAG
AAATAACCGATCAATATTTGAGTGATCTATATTAATCCGATACTGTTTGG
TTAATGTTGGTTCAGTTATCTTTTGGAACAACCATTTTCTATCTAGAATT
TTCATGCGTTTGTATTTGTAAGAaactaatttaaaaattttcaaggtaTA
ATTCGTAGAAAGAAGGTTAGAAGAAGTCATTTTCTCTGCTATATGCAATG
ATGCTTatctttccttcgttcaaaagaTTCATAATGAAAATTAATTGATG
TCATCAAAATGAGACAGTTTTAGCAAATCATGAGCAGggataaattttct
aaattttctatcTCAGCCAAAACCATGGTCGCCCTTCGGGTGACAATAAA
CACGAGCGATCTACTAAAATAACCGATCACAACGGGAAAGCTTATTTCGC
CCACTGAATTGCAAACTTATTTCCAGTCTCCTTTCCAgttactttctgta
attcgaatctctctgttattcgaacaagTGGAATTCCCCTTTCGagctcg
aattagcgagagtcgacTATATCTCTAAACAATTATCTTTGCGTATTGTA
GGTATTACTGTGAAGACGGGAAGACGatcttatttcaaaaatatttccat
tTGCGCTCGTTGGTTCAAGATTTTCTTCCTGTTATCAAAGAATATTTTGC
GTCGGAGCAATACAAAACTGGTGTCCCTATACCAGGTACATACCATAATG
TCAAACTCTAAATGTATAGATTTTCGTAAACatccaaatttcaaaatctc
CCTTAAGGtttaaacaccaaaattaaGTACTCtagggtacctaatagccg
ggggggggggttggaataagaatgtcctggggggaaaatgtttgaaaagg
aggctaatacagcagaattaagacaaaaaagggaactttcaaaaacattt
tcccagaaattaataagcgggagggggggttggaataagaatgtcctggg
gggaaaatgtttgaaaaggaggctaatacagcagaattaagacaaaaaag
ggaactttcaaaaacattttcccagaaattaataagcgggagggggggtt
ggaataagaatgtcctggggggaaaatgtttgaaaaggaggctaatacag
cagaattaagacaaaaaagggaactttcaaaaacattttcccagaaatta
ataagcgggagggggggttggaataagaatgtcctggggggaaaatgttt
gaaaaggaggctaatacagcagaattaagacaaaaaagggaactttcaaa
aacattttcccagaaattaataagcgggagggggggttggaataagaatg
tcctggggggaaaatgtttgaaaaggaggctaatacagcagaattaagac
aaaaaagggaactttcaaaaacattttcccagaaattaataagcgggagg
gggggttggaataagaatgtcctgggtggaaaattttcgaaaaattaatt
agcggggggactagacggctattaggtacccgagagtagtttcATGTAAG
TTTAGACTATGTTTTTGTATTCCATTATGACATGTTTACGGGAGATCTTG
AGTTGATGACTGCACTCTTACTCAATTTCATGTTATAAGAGATGAGTTGT
ATTGCTGGCCTAGAGTTTTTGTCTAGGTTttaatgttcaatttttcatga
taGGAACAACAGACGAAGACGAAGAAAAATTCAAAGTCGATCGAACGTCT
ACCGTTAATACGCCTTTCCTTTTATCTGAGGTGAGAAGTGAATGTGTTTC
TTATTTCTGCTATACTCCCCGTGTCACGAAACAGGTTGACCACTGTAAAA
TCACTAATTCTCTGATACCCCCCTTGTGTAATTGAGCAGTATACAATCGA
ATACAAAAATTCGAACCCTTTAAAAGTAACAAGTGAGCTTTTCCGGTATT
TTGCTACTTAATTTTATCCCTGTAATTGTAAAAATTGTTCATGAGACAAA
GGTGCCACTATACTAATTCTGTCTCGAgagttttacttttttttatttat
tttatataatCTTCTTTAATCAATCGCTAGTGGGTGAAAGAAAACCGAAA
AGAGTTGGATAATCAAGGTAAAGTGTTGTTCGAACAAGGAGAGTTCAAGG
TATGTGTCTTGAGCATATTAACTCATCGAGCACCCTGTGAGGAGAAGATA
AAAATCCTCTACGAATTGTTAGGAATATACTTTGCTTTATAACCATACGG
GAAATTTGCGGGCTGAAACTCATCATTCGCTTGCTTAGCAACATTTAATT
TTCAGCCTCAATTTATGCCTTAACATATGATATGTTcacgaaattttttt
taaaacattgtCAAATTTGACTgattttcatcttcactttttACTTTCTT
TATGATTACATCCACTCGATAAAAAGGTGTGTGTACTTGTTGTAATAAGT
ATTCTTATACGCTTTTAATTGAAGATCATTGTGCAAAATGCCTTTCAATT
CAATATATTTATTGTCTACCTCCCTGTCTCATtgattctattttcaaaac
aaaatttgaattatgaaTCTTCGAGCTATGCTATGCTAAGcattgtgttt
gtttttttctgctaATTTGAGCATCAGTCtgctttttaaaaattatgctt
ataaaaaagagagtCTCTTCGTTATATCCCTCGTCTCCTGAAATTTAGCT
TGTCTCTTAAATATGTgactttttatccattttttcaacttattcgCGAT
CAAATCAAAATCTTCCTTTGGAGAAATTTACCACATTaacgttttttgaa
attttgtaaacaaaagtttagaaatcgaTCTTCTTACTTTTTTGTTCGCT
TCAGGTTTATGCTAATGGTGAAGGTAACTTTTCACAACAAAACCCTTTTG
AATCATGGATCTGGTTGATGGTAATATATTTTTCCTGTTTGTTGTATTAC
TGTTACTATTCTTAAAACTGTGGGgtacttattttggcgagaacttattt
cgtcgaatgttcaaactttttaatttcggcgagaactaattttggcgaat
agcAGGCTCAATCTGtcctattttgccttattttgagcaactttgatgaa
tttttcGGGTTATTTTGACAAAGTGaaagaaataataataattttggCGA
GAGCTTACTTTGAGTGAGTaagataattaattttttggaaaactaatttt
agcgaatttTGTCTAAGGTCGCCAAATCCCCCAGAATTGGTTCTTACCAA
AATAAGTTTCCTTAATGTATGTAGAGATTCCATGTTCAAATTAGACTTTT
GTATCAACTTTGCCAGTATGTCGAGAATATCTTAACAAGTCACATGGTCA
AGATAATAACATATTACTTAACTTTCCTCTTCTGTCCCATACACAGAATG
GTAAATGCAAGTTGCAAATTGATGGTCAAACTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005361XLOC_005361Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009604-exon-sc0000097-1491911889:560031..560073TCONS_00009604-exon-sc0000097-1491911889:560031..560073Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1510915933:560031..560073TCONS_00009604-exon-sc0000097-1510915933:560031..560073Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1575043694:560031..560073TCONS_00009604-exon-sc0000097-1575043694:560031..560073Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1491911889:572964..573071TCONS_00009604-exon-sc0000097-1491911889:572964..573071Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1510915933:572964..573071TCONS_00009604-exon-sc0000097-1510915933:572964..573071Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1575043694:572964..573071TCONS_00009604-exon-sc0000097-1575043694:572964..573071Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1491911889:573478..573556TCONS_00009604-exon-sc0000097-1491911889:573478..573556Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1510915933:573478..573556TCONS_00009604-exon-sc0000097-1510915933:573478..573556Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1575043694:573478..573556TCONS_00009604-exon-sc0000097-1575043694:573478..573556Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1491911889:573964..574047TCONS_00009604-exon-sc0000097-1491911889:573964..574047Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1510915933:573964..574047TCONS_00009604-exon-sc0000097-1510915933:573964..574047Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1575043694:573964..574047TCONS_00009604-exon-sc0000097-1575043694:573964..574047Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1491911889:574303..574365TCONS_00009604-exon-sc0000097-1491911889:574303..574365Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1510915933:574303..574365TCONS_00009604-exon-sc0000097-1510915933:574303..574365Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1575043694:574303..574365TCONS_00009604-exon-sc0000097-1575043694:574303..574365Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1491911889:574715..574755TCONS_00009604-exon-sc0000097-1491911889:574715..574755Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1510915933:574715..574755TCONS_00009604-exon-sc0000097-1510915933:574715..574755Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1575043694:574715..574755TCONS_00009604-exon-sc0000097-1575043694:574715..574755Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1491911889:575532..575665TCONS_00009604-exon-sc0000097-1491911889:575532..575665Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1510915933:575532..575665TCONS_00009604-exon-sc0000097-1510915933:575532..575665Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1575043694:575532..575665TCONS_00009604-exon-sc0000097-1575043694:575532..575665Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1491911889:576634..576710TCONS_00009604-exon-sc0000097-1491911889:576634..576710Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1510915933:576634..576710TCONS_00009604-exon-sc0000097-1510915933:576634..576710Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1575043694:576634..576710TCONS_00009604-exon-sc0000097-1575043694:576634..576710Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1491911889:577011..577079TCONS_00009604-exon-sc0000097-1491911889:577011..577079Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1510915933:577011..577079TCONS_00009604-exon-sc0000097-1510915933:577011..577079Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1575043694:577011..577079TCONS_00009604-exon-sc0000097-1575043694:577011..577079Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1491911889:577785..577850TCONS_00009604-exon-sc0000097-1491911889:577785..577850Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1510915933:577785..577850TCONS_00009604-exon-sc0000097-1510915933:577785..577850Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1575043694:577785..577850TCONS_00009604-exon-sc0000097-1575043694:577785..577850Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1491911889:578327..578364TCONS_00009604-exon-sc0000097-1491911889:578327..578364Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1510915933:578327..578364TCONS_00009604-exon-sc0000097-1510915933:578327..578364Clytia hemisphaericaexon
TCONS_00009604-exon-sc0000097-1575043694:578327..578364TCONS_00009604-exon-sc0000097-1575043694:578327..578364Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097supercontigsc0000097:560031..578364 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	43.999	34.8637	21.8707	18.9308	5.85049	16.9141	13.7406	13.583	9.93845	7.60507	10.7605	11.6021	15.4429	13.0952	1.87618	7.17597	0.0486578	10.634	1.12901e-07	0.0295233	12.1666	14.0809	28.5785	11.0612	0.18332	5.97401
Blast
[Close]
BLAST of TCONS_00009604 vs. Swiss-Prot (Human)
Match: 3HAO (3-hydroxyanthranilate 3,4-dioxygenase OS=Homo sapiens GN=HAAO PE=1 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 1.340e-67
Identity = 108/243 (44.44%), Postives = 164/243 (67.49%), Query Frame = 3 
Query:   84 VNVDKWLKENEESFKPPVCNSIMAGGYLKIMFVGGPNVRKDYHMDQGEELFYMLKGDMCLKIMEKGEPKDIHIREGEVFVLPSRIPHSPQRNANTLGLVIERERAD-QWDGLRYYCEDGKTILFQKYFHLRSLVQDFLPVIKEYFASEQYKTGVPIPGTTDEDEEKFKVDRTSTVNTPFLLSEWVKENRKELDNQGKV-LF-EQGEFKVYANGEGNFS--QQNPFESWIWLMNGKCKLQIDGQ 797
            + V  W+KEN  SF+PPVCN +M    LK+MF+GGPN RKDYH+++GEE+FY L+GDM L+++E+G+ +D+ IR+GE+F+LP+R+PHSPQR ANT+GLV+ER R + + DGLRYY  D   +LF+K+F+ + L     P+I+E+F+SEQY+TG PIP    + E  F +  T ++  P  L  W+  + +EL     + LF +  E +V A G+G+    +QN  + W+W + G   + + G+
Sbjct:    5 LGVRAWVKENRGSFQPPVCNKLMHQEQLKVMFIGGPNTRKDYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPHSPQRFANTVGLVVERRRLETELDGLRYYVGDTMDVLFEKWFYCKDLGTQLAPIIQEFFSSEQYRTGKPIPDQLLK-EPPFPLS-TRSIMEPMSLDAWLDSHHRELQAGTPLSLFGDTYETQVIAYGQGSSEGLRQN-VDVWLWQLEGSSVVTMGGR 244
The following BLAST results are available for this feature:
BLAST of TCONS_00009604 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
3HAO1.340e-6744.443-hydroxyanthranilate 3,4-dioxygenase OS=Homo sapi... [more]
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