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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009585 ID=TCONS_00009585|Name=TCONS_00009585|organism=Clytia hemisphaerica|type=transcript|length=2588bp
ATTGTATTAAATAAGTCTTAATATTACCCAAAAAGGAGTAAAAAATTTTA
TAGTTATATTGATACTTTTTGTTCAGATTTAGACCAAGTAAGAAATTGAT
CAATAACTAAATGAGGTAGTTTGGACTTGTTTCAAAGAATTTGTCGAGGC
TGTGGATTTTTGGTTGGCAGCACAAGATGGAGACCAcacttgttttgaaa
atatttggagcaattattttgttttttgtcacttttctttttacattgCT
TCCATACAAATTAAAGCAGATGCGTGCAgacaaattgaaaattatttctt
gcttcTGCGGTGGTCTCTTTCTTGGGTTAAGTTTCCTTCACTTGATACCA
GATACTTTGCGAGGATTTTTTGGTAGTGAAATTTTACTCAAACTCCAAAG
TAAATATCCTTTTGGAGAGTTGGTAATCATATTGGGAATGATCTTGGTTC
TGTCTGCAGAAAAGTTTGCTAGCCTCATCCAAATCAACCAccaggaaaaa
aaaacaaaatgtgatGGCAGTGAAAGTTGTTGCCAAGAAGAATGTGCCGT
ACAAGGAGTTCCAAATGAGAAAACACCACTTTTCAAGCAACTGAGAAAAC
CATATGTGGAAGATCAGACAGTAGAAGCAGTCCCATCAAACGAGAAAGCT
CAGGAAGCTGGGACTACTGGAGAGGCTGATAAAATGGATTCTGATGATGA
TTCTTCAATATCAATTGAGGATAAGAAAACTGTTTTATTTACACAAAGTA
ACCAGTATAGAAAACTATCAACTACATCAAACACTTCAATGGGAAacaaa
attcaacttttaaaaatcagaaCCATCTGTTTGGTTATCGCACTCATGAT
TCATTCCTTGTTCGAAGGTTTGACAGTTGGTTTGCAGCCTAATGCAACAG
GTGTCTGTGTGCTGGTTGCTCTTTTGTTGTTCCATAAATCGTTAGTTGGA
TTCTCATTGGGTATTGCTTTGGTCAATGATAAAAGTGATCTGAGATCCTT
CCAAAAGAAAGCTGCACTCTTCTCTATTGCATCCCCGATTGGAGCTATCA
TTGGCATTATCATTTTCAGCGTTAAATCAAGCTTTGTAAGTGACGAAGTG
GTTGTTGTGCTCACAGGGCTCTCCACTGGAACTTTCATTTATGTGACCTT
CTTTGAAATCCTTGGTAAATGTTTAGAAGGAGATAAGATGGAAGACATGA
TTGGATTTGGTTGTTTTTTGTTAGGCTTTGGTATGTTTGCTGGAATCACT
GCAGTACCACAATTCCAACATTAATGGTATGAatgctattcatgatatgc
accattgtaatTTCTTCAACGGactcaacagctgattggttgtaattgac
gtattaactgattttacgtcacttacaacccaatcagctgttgggaccat
gatgtaatgtccagaagacattgcaatagtGCACCATCGATCCGGTGGCA
CTTAGACATTTCACGTCATTTTAACACCTATCAAACTCAAACTCAGTCCC
CCAAGGTATTTCACGGTTGAAATAATCTACgagtaatcaggactgattga
gCTCTTATAACAACTTCCTATTGGTCAGGAATTATCTtcgtaatctcatg
gttgatttaaattcgattgacgtttatgcttacgttaatttgtaatttcc
cgcgaacttgtaatttccctcctagattttgtaatttcccgcaaaatgaa
attttcatcgtttgcaaattcatcacctttttcgactttcttactaactt
taaaggcttaattaagtaaatggaatactatccaattaaaactcgattcg
cgtttctatgacttttttgagacctctttaaattttcagattgatttcca
gtgttaaaattgacgtctttcagaattgttagaatttcaatccaaaccat
gagattaacctagaatcccatgcttgttttcgtgaaattctggataaatt
accctcggtcaaatttctcgttgcactcgggaaatttcaaaaaatttcaa
aattgacctcgggaaatttatcccgaatttcccttataaccatgagatta
ctagtacgaATGTTTGACCAATCCCTATGGTCATGCGACGTCTTATGGAC
ATTCAATGGACGGCTTTAAGACCTTTGGATAtcctagaaacgtacattag
acgtccaaaagGCATTTGTGTCCATTGAGATAGGGTTATCCCATAACTCC
TGATTACCGTAATTTCATTTCGACCGTAAAATGCAGCTATTGGCACGAGT
TGAAAGGTTGATTTTCTGGAATGAGTTTTTGCAGTAGACTGAATTCCGAT
GGTtctaactataaaccctcgaatgtgacagagcccgattttcaaaaaaa
aaaaatttggggcaaatttgggccaaaaaacggctaaaaacgggtttttt
gggctttgtgaaaaattaggtcgttaattttttctgattttttgcatgaa
agtagggtaccatcgtaggtaaaagatggtttaagcagatttttgcaaaa
atattttgttggctcaaaaaacgcatgtttatctataagaatcactatta
ataagcatacatcaatgttcttagtcaaattactcaat Run BLAST on NCBI protein sequence of TCONS_00009585-protein >TCONS_00009585-protein ID=TCONS_00009585-protein|Name=TCONS_00009585-protein|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
METTLVLKIFGAIILFFVTFLFTLLPYKLKQMRADKLKIISCFCGGLFLG
LSFLHLIPDTLRGFFGSEILLKLQSKYPFGELVIILGMILVLSAEKFASL
IQINHQEKKTKCDGSESCCQEECAVQGVPNEKTPLFKQLRKPYVEDQTVE
AVPSNEKAQEAGTTGEADKMDSDDDSSISIEDKKTVLFTQSNQYRKLSTT
SNTSMGNKIQLLKIRTICLVIALMIHSLFEGLTVGLQPNATGVCVLVALL
LFHKSLVGFSLGIALVNDKSDLRSFQKKAALFSIASPIGAIIGIIIFSVK
SSFVSDEVVVVLTGLSTGTFIYVTFFEILGKCLEGDKMEDMIGFGCFLLG
FGMFAGITAVPQFQH Run BLAST on NCBI transcript from alignment at sc0000097:397807..411078+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009585 ID=TCONS_00009585|Name=TCONS_00009585|organism=Clytia hemisphaerica|type=transcript|length=13272bp|location=Sequence derived from alignment at sc0000097:397807..411078+ (Clytia hemisphaerica)
ATTGTATTAAATAAGTCTTAATATTACCCAAAAAGGAGTAAAAAATTTTA
TAGTTATATTGATACTTTTTGTTCAGATTTAGACCAAGTAAGAAATTGAT
CAATAACTAAATGAGGTAGTTTGGACTTGTTTCAAAGAATTTGTCGAGGC
TGTGGATTTTTGGTTGGCAGCACAAGATGGAGACCAcacttgttttgaaa
atatttggagcaattattttgttttttgtcacttttctttttacattgCT
TCCATACAAATTAAAGCAGATGCGTGCAgacaaattgaaaattatttctt
gcttcTGCGGTGGTGTAAGTAGCTAAAAATTTAGAgtgattttattaaat
ttttttttatcagcAACTGTtatagaaaatttcttttttttgctttttat
ttcgTTTTATTAACAACAAAAGAATTCAGGAATATGTTCAATTGCTGAAA
ACTTGATAAAGATCTGTAAAGATAGAAATATtgttgtatttttatttttg
atttttttatccacACAATCTTTGGCTTTTTCTGTTTGATTTACAATGTT
GGTAAATGTCTGGGAAAATATAGATCAGGCTTTCctgttttctttttcga
atttaaaaatcttttttttacactATTCACTTAATTCAATTTTCAGCTCT
TTCTTGGGTTAAGTTTCCTTCACTTGATACCAGATACTTTGCGAGGATTT
TTTGGTAGTGAAATTTTACTCAAACTCCAAAGTAAATATCCTTTTGGAGA
GTTGGTAATCATATTGGGAATGATCTTGGTTCTGTCTGCAGAAAAGTTTG
CTAGCCTCATCCAAATCAACCAccaggaaaaaaaaacaaaatgtgatGGC
AGTGAAAGTTGTTGCCAAGAAGAATGTGCCGTACAAGGAGTTCGTAagtt
tatataagaacaaaatttaTGGACTTTAAGTTACTCGTTATGAATAGCAT
TATTATCAAATACCTTATGTgcttgatgtttttttaatcatCAAATGCAA
GCTCTCCTGCATCTAAAtattcagtatatagaatatCATACTTCTGTTAT
TActgtatttcaaaaaatctgtacTTGTTACTATTAGCAAATGAGAAAAC
ACCACTTTTCAAGCAACTGAGAAAACCATATGTGGAAGATCAGACAGTAG
AAGCAGTCCCATCAAACGAGAAAGCTCAGGAAGCTGGGACTACTGGAGAG
GCTGATAAAATGGATTCTGATGATGATTCTTCAATATCAATTGAGGATAA
GAAAACTGTTTTATTTACACAAAGTAACCAGTATAGAAAACTATCAACTA
CATCAAACACTTCAATGGGAAacaaaattcaacttttaaaaatcagaaCC
ATCTGTTTGGTTATCGCACTCATGATTCATTCCTTGTTCGAAGGTTTGAC
AGTTGGTTTGCAGCCTAATGCAACAGGTGTCTGTGTGCTGGTTGCTCTTT
TGTTGTTCCATAAATCGTTAGTTGGATTCTCATTGGGTATTGCTTTGGTC
AATGATAAAAGTGATCTGAGATCCTTCCAAAAGAAAGCTGTAAGTAACAT
TGAAATTCACTTCAGTTGAACCTATTTTGCGATGCCTGCATGTTTAATTT
ATAATCAAAATATAGCAACTAAAACCTGGTGAACAACTATCATTTTTATG
ATGTTTTTTTGTGGAACGTGCTTTAAATGTGAGATGCTTGACCACCATGT
ACTTTATTTCCTCAAATAAGTAACAAcataattattttgaagaatatgaA
AGTTTGGTTggttctcttttcaaaaaacgtTATGTACCCAccttaggggc
cgtccacatagtatgtacgcactaaaatgtcaaaaatcgaaaaagccCTG
CTCCCCCACCCCCTGGACaaaagcgtacgcaaatggctatatacccctgg
taagtacgtactttttaaattcaaacccccttccctcggttgaagaaaat
ttcgaatataAATCGTTTGGTttggacctttatttcatacatgaaagtca
atgtttattaagaaactttttcttttccttttccttgAGGCGTATAAGAA
GCGTAAGAAAACACAAGAAAACACAATAGCATGAAATATGAGAATAAATA
ATGCAGCAAAAACtatggaaaaactttttctgcgtacgtacattttcctt
tgacccctcccctcgccctgtacgcaagcattaGTGCGTacatactatgt
ggacggccccttaggtGTTTTTAGAGGGCCATGCTCATTGACTGAGGGTG
TTGCTATAAAGAGGAGATACAATAATTGCTACAGTGTTTCAGAGTTAGct
gtttaaaataatttttggactTACCCCGGGTGTAGGTACTATAAATTAAT
cgttgtccgtccgtccgttcgttcattcgttcgtAAATTTCtgccaaaaa
cggctaaaaagagGGTTGACTGTCAGACAtgtttttcatagaaaaattgg
ccaaattcaATATGTTTTTAAGCACATTTACCAATTCCCCTAGTAACGGC
GAGTGAAGCGGGAAAAGCTCAAGCTTGAAATCCctgatctttgtggtcag
cgaattgtagtctcttagttattagcttttctcaagattggctcattcat
tctttatgattttttgcacaaaggtgcctaactataaaccctcgaatgtg
acggagcccaattttggaataaaaaatttggggcaaattccagccaaaaa
acggctaaaaaaagggttttttggataTTGCTGAAAACTGGATGATTgat
ttttcctgattttctgcatgaaagtagggtaccatcatcggtaaaagatg
gttgaagcagattttcacgaaaaaaaattttcacctcaaaaattgaatgt
ttaTCCAAGAATCAgtatttataagcatacattaatgtttttagccaaat
tactcaatttgtTAGATGCGATGGACATTCTTTTCCTTCCAATCTCATCT
ATCCTTCCTTGGGATGGGCACGGGGACAATCAATGAGGAAAACGAACGac
caattttaataaatcgtcccTATTTGTGTTCCGAATGATTGTTTTAACGG
TCACGCTCACATAGATATCAATTAtcagtgttgcaacttttccgtctgta
gacggatatccgtccagttgagatacaaatatatcatttccgtcttgcca
gtaagagggtttttggttcaaatgacCATCTAATCCTAAGGTTTCCGTCC
ATATTCATAAAACCTAGTTGCAACACTGaattatgtgttaaatgcataac
caggtagttccataaaagtatcacttttgAAGTTCTTTCTTGATGTTTTA
GGCACTCTTCTCTATTGCATCCCCGATTGGAGCTATCATTGGCATTATCA
TTTTCAGCGTTAAATCAAGCTTTGTAAGTGACGAAGTGGTTGTTGTGCTC
ACAGGGCTCTCCACTGGAACTTTCATTTATGTGACCTTCTTTGAAATCCT
TGGTAAATGTTTAGAAGGAGATAAGATGGAAGACATgattggatttgttt
attttgtgcTTGGTTTTGGTCTTTTTGCTGGCATTACTGCAGTACCACAA
ATGCAAGTTTAATGTGAAGTTGATAAATTACTGCAGAAAATATTTCCAAA
CGATTCTCTGTAgcttgggatgagctggagtttttataagatacttcact
aattggtcatggTCATTAGAAGTAAtggagatgacgcgttctttagaaaa
acgACCAACCAAATTACATAAGAGCTTGTAGAAACTTTAGCTTGTCCCTG
TTACTTTAATTAATTCAAATGACTATGAACAATGAATCTTATCActaaaa
aattaacatttttcaatgaggcatatttttgaaagaataatAGCAAAAAC
ATTCTTTACATACACTTTGTTGGGTAATTGAGTCTTCTTTTCTAATCTGT
CTTAACCAAAAACACGATAAAATCTGGTCAAAACTACCAGAACACAGTTG
AACAGTATTTACACCACTTCATCTAAGGCttgatatatttttattatgtc
atgttattttctgatttttacgTATTAAGAATCATATTGGTACACTGGAC
TTATTATTAATGCACATTTCGCATACTTTCTATAAGAATACTTTTCATAA
ATAATATTAGAATTTAGNATGCACATTTCGCATCCTTTCTTATCTATAAC
AATACTTTCATAAGTaatattagaattttttttaactgaaatgCTTGGGG
TATATTTGAttcatcagattgttttttttaatatttcacagatttatatt
gttttgaataaattatgatttttttaatattttgggccaataattttatt
gttttgagcAATTTTAGAAACATTATTAGTATAATAGAAAAAAGGACAAG
CAGCTTTAAAATGAGTACTTGATTACAAATTTTATAAGTTTTTAAAATCA
TTTCTGCAAAAAGTACAAGTATTTTACTTTGAGATGTactataccttatt
ggaactaattttcatggGAACTAATATTCGTGGTCGAAaagaaaaatcgg
aaaaaatgcgAAGAACTGGGATTTAATTTtagcggttttgcccttttttg
gacaaatttctttcattttcctagggatttttcaaatttttcgataaaat
tgcgGGTTCAAATTTTCCCATAGCATGGGCCTATTTTTACTTCATTTCTC
TTGAATCATAGACTTACTTGGGAGGAGAACGAAATGTGGAGAGGAAAACA
TAATGTTTCGTTTTCTTTCTACCCTGTAATGCCCACTGTTTTATTGTTAC
tgaattgttttttcattcCTTTGTCGAATGTGAATAAATATTAAATTTTG
TCATTTAGcacattttgtttttcaaaatttatatagATTTAATAACTTTT
GTCCTTTAATAATATTTTAGATAATATATTAATTGTAGTCTGAATATGGG
AGATAAAATTATTAGTTAAGTCATTTTTGTTATAGTAACCTGAAAACTGA
ATATTATAAGTGGCCAAATTTTTGCTTggacattttcacaaaattaaaaa
tctaaaatttttgcatGGAAAAACTTTGCGAATATGAGTTACAAATGTAC
ACCCAACAGCTttttagaagtgacgtaaaacttgaatttaTCCAATAGAA
TGGCTTAATTTTGTTTCAGTGAAACGGAACCGTATCGTGTGAACGTGGTC
TAAATGCATTAAAATATAAATgtgtctttgtttttcaatctcATAACATG
AtgcattgattttatttttttgcaaacaatttttttagCGTTCATTTAGT
TAAATGAAATATATAGCAGCCAGCCATTTTGTTAAATTAAAATATGCCTT
TTTTGTaggtattttttcatttatctgaATGATTAAAGGGTTATGGATTT
TTCTTGTAGCACTTTTTGTACTTGTAGAAAGTAGTAACATTTTTATATTA
AAGAAATAGATGAAACTAGGCCTGTCTTATTGCATTGGGGGTACTAAGAT
CTTAAGACTCCTTTGAGGTCATGTTTAGATTACCTAAGTGCAAGGCTTTT
TCTTATATTCTTGTGTTATTGCTGACACAGGACATAATTGTGTAAAACGA
GTACACCATTACACACTGTATTTTAAACTTTGAACCTGTAGATCCATTGT
CGTTTAAAGATACTCATTGTCCATATAAGGTTCCCCTGTCACTTGTCTCC
TCCTGCCACTAGACCTTTTTAATCCCCAGGTGTCAGATTTGTTGTATCAC
GCTTCtaatgctcttgaaatattgtGTTATTTTTATCAACATTATAATAC
AGTGTGTCTCGTAAAAAAGGGAGCCTTTGTTTTGGATTTAAGTATAAGAC
GATTAGTATAAAACACTGATTCACACTGCATTTGGCATGACTCGAGAAAA
GGGTGGCTCATTTTGTTATACAACACTTCTGTTTCACTGTATTTTAAACG
ATTCACACTGCATTTGGGACGACTCGAGAAAAGGGTGGCTCATTTTGTTT
TACAGGAAAATAATCTTTCTTTTACATTAATTCATGCTTCTTATGACTTA
CATGGTATTGTAAAGTTCTTGATAGTTCCTCGATTCCTGCCAATCTGTCT
AATTGTGATAAATTTATGAGAATATGTAGTATATAATTTTAACATCTGTT
TATCGTTTTAGATTgtaaaaaatagtgaaaaaaaacaaaataatggtGGA
TGAGTGAATATGAGAATGATTGCGTGAATGGATGGAAACTTTGTTGATca
taaaaacaaatgaaaacacttttccaGACACCTTCATGTTTTGATAGGAC
TTATTTCATCATCGAGATGAAagatttttctatatttttattaaaaacaa
cCCTGAATTTGAGCTTTAGAGGTTATAACTTTCACAAGTCATTAAAAGGG
AAATGCTTATTTATTTACTCTATCAGTGTTCATCAGGTTTTATAAAAAGT
CAATTAAGAAATTGACCCGCATTTCATTGATATGATATTCTATCAAAAAA
GTGAGTGGCCACTATTCATAGATTAAGTTTATGATATTATAGCTAAAAGA
GTGGTCACAACAAAGCATTGATATCACTCCACTATTTTTAAAAGTCAAgt
atttttaagatttcatCGAGTTTCATTTATATAAAGATATGCCGAGATGT
TTTGATCTTTGATGTTGTTTTATCTTATTTCTTGGTGTTTTTGCCATGTG
TCGGGTCGGCTTTTTCTCCAAACTTTACCACCTCTAAAATTCTTTACTTA
ACTCTCGTGTGCTTGTTTCTAGGTAAATCTGATCCAAGTTTTGAAAGCGA
AAGAGATAATCAATTTCTAATTGTAAGATTGTTGTTGGTGATGTAGGTTG
TAAAGAGGAATCATAATTATATCAAAAAAATGGACTGGACATTGTTCTCG
AAGATTATTGGAGCAATCCTTttgtttgtgtttacctttttgtTCACAAT
ATTACcttataaattgaaaaaaatccgtcaaaacaaattgaaaagTATCT
CATGTTTTTGTGGTGGGGTAAGTGCCTTTTTaactctagtttagacggcc
cactttttgccctgcctattctaactGTGAATTGGAGTTGGCAgaaagtt
ggctgtctaaagtcaatgcattgccctcttttgacgtcaatgccatgtct
tctttcaatctttttcaagcaaagttTTTAACTGCCAATATAGTGCCTAC
tttttgcctactctaacaattagaataggcagggcagaaagtcggccgtt
taaactagagcttaatttttttactttgtacaacgaagtttttttaactc
gaacttctttaactcaaacaagttttcCCGTCCCTTCAATTAACAATACT
TTATAAagcttactccataactcgagatTTTCTTAACTTAACAAATTTGT
GTTACCTGTACGTGCtcaagttatggagactctgctttaatatttttgac
accTTTGTTACCTAGAGTTACCGACGGACAGAATGTTCagatttttgacc
atttttgcgTCCCCACAATACAGCCTACAGCTGGTGATTTTCCGGGAAAA
TTCAGATTGTTAACACAAATTTggtagtacacgtttttttttataagaac
aaactatataagaacataaggcttcgaggcccaaaaatctaagaacattc
taagaacatactaaggctttggagacNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNcggggggggggggggcaggggGTCATGgcccc
ccaatattttgcaaagtatttttttttactttaaaaaatcccGTTTAGAG
GGATGAAATAAGtgtgaaaagtcgaaaattttaattcatcgcccaaccat
ggtgagcgacatattttttggccccctcaattcaATTAGCACGCCGGGGA
CCATGCCAGAGTTAAATATTTATACTAAATCAAGTTTTATTCCTTCATCC
aaattccagcttttccttgGCCTCAGTTTCCTACATCTAATACCCGAGAC
TCTCCATGGTATCCATGACAACGAATCCCTAATGAAAATACAGAAGGTGT
ATCCATTTGGTGAACTGGTTGTCATCTTGGGCATGATTCTGGTACTGGCC
ACTGAGAAGTTCGCAGGAATGATCCAAATTAACCGCAAAACCACCAAAGT
GAAATGTGATGCTAGCGAGAATTGCTGCCAAGAAGAATGCACTATACAGG
GGCTGGGTATGGGTATGCATATGTATTAGTTGTAGTATTAGGGTTAAGGG
TGTGGTATAGTTCAAGATAATGAGAGGTATCTAAAAGGGGTTGAAAGGTC
AAGTCAAGGTCCGAGGACCTGGGCGCCAATTGGGCTTAGTcacatttctt
aaaaaaaaaagacatttttggacatttttaaGTACCTTCAAATACACAAC
AGTAAGCTGCTTATGGCAACCagtgaatgggcttttccagaaataatctg
tgcccccctgttgagggtatcggatatccagggggttaacgatttttgtt
caaaagtggatattcagggggttaaatatctacaaagggagcggatatcc
agggggtaaagtgtcttttcaagtaagaagtacgatatccaggggtaagc
atatttttaagagtgaatatccagggggtctttactaataaagtaggata
tccagggggttcgatacttcgaaaaatcaatatcctcaacagtgggggta
aaaaaattttctggaaaagacCAATGATattcgggacaagctggagtttt
tacaagctcttatttgatttggttggtcgttaagatgtaataaaataatc
ttattactttttctaaagaacgcgtcatctctatcactttaaataaccaa
ttagtgaagtatcttgtaaaaactccagctcatccctgatATTCGGCCCC
TTTTTCAGCATAACAATAAATCTGCACACttgataccttatcggggaaaa
aaatttgggggaaagtgacgaaaatttcccgacattttatcacccgacca
aaacttgtaccacatttttttatccccgaccaaaacatttacccgaaatt
ttataccgcaaccaaaattcaaatctaattttcttacacctttatttacc
gaaattagtgctttaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaaccatttctttt
ggacagtttagtcgggtgaaagtgacgaatttgaaatttttgttggggaa
aagtgacgaatttgaaattttggtggggggaaagtgacgaaaatgcctct
aggtgacgaaatttgttcccgatgaaaaaaaaaaccgactaaataaaact
ccgacattttttttccCGATAAGGTAATTCATTATTTTATCGTCATTCTT
TTCCCACAGAGGATAGAAAAACACCATTGTTCAAGAAATTGGAGAAGCCG
TACGTCGAAAGAGAAGTAACACCTTCGGAGTCTTCAAGCAGTGAACAAGG
TGAAATTGAACAAGACACGAAAGAAAAGATCGAGGAAGAACACTTGTCAT
CAAACGAAAAAGATGTCATTTTCTCACATAATGGACAAAACGGTAACGGC
CACAGAGTATCGCTCACTGCCAGCACCATAGAGAGTAAAAATGAGCTTCG
TTTATTAAAAATTCGAACAATTTGTTTAGTGATAGCACTTATGGTTCATT
CGCTATTCGAAGGTTTAACGGTTGGTCTTCATGACAACGCTTCGAATGTT
TGGATTTTGTTAGCGTTGTTAATGTTCCATAAATCGTTAGTTGGATTCTC
ATTGGGTATTGCTTTGGTCAATGATAAAAGTGATCTGAGATCCTTCCAAA
AGAAAGCTGTAAGTAcatgtttctttataagaaccaagTAAAATTTGGGT
GAGGCTCGTCTGTtcttttttggtgattttaaaGACAGGTCTCCACTtgc
gatcgcaccttttggcttcaatcctttttgcttggaaaaaagattacgtc
ataaaaatgtagctaAATGTGactacatttcaactttttttaaaccgtta
cgtcagatcgcaccaatggaattgtttcatttttcttttggccaacagcg
tggaagctttgctcgaaaaagtgcgatcgcagcgtgcgcaagtggagacc
ggccttaagactggaatgttctcaaaatgttcttgatATGCTTGCTTTAC
TCcctttttgattgaaaaagggGATTTAAAATTACCGAATGTTATTGCTC
TTTCAAtgacaccacggctggttttaattaacccgaaatttctcaattcg
tgttaattacaCGTCTCaatattcatgtaataaggtagcATTTTCCTAGT
TAGCTCTGAAATCtgaaattcttcatttttcagaatatatacaccttttc
gaccgtagcctccaattgccgcgcgggcatttttttgtctgttttaccac
cctaaaaaccgtcccagtctttttttcgcacctatagacaatagaaaaag
gtgtaaaaaaaggtttggatcgagtttaggggtgataattaaataataaa
gtggcaccgCCTGACCGCTCGATTACggccgaaaaggtgtattgaccCAT
ATGAAAATATCCTTGATAGTTGAtcgaatgtctttttttatttttagggt
CTATTCGCCATTGCTTCGCCGATCGGAGCTATCATTGGTGTCATCATTTT
TAGTGCCAAATCAAGTTTTATAGGTGACGAAGTGGTTATTATTCTCACAG
GGCTTTCCACTGGAACTTTTGTTTACGTGACCTTCTTTGAAATCCTTGGC
AAATGCCTGGAAGGAGATAAGATGGAAGACATGATTGGATTTGGTTGTTT
TTTGTTAGGCTTTGGTATGTTTGCTGGAATCACTGCAGTACCACAATTCC
AACATTAATGGTATGAatgctattcatgatatgcaccattgtaatTTCTT
CAACGGactcaacagctgattggttgtaattgacgtattaactgatttta
cgtcacttacaacccaatcagctgttgggaccatgatgtaatgtccagaa
gacattgcaatagtGCACCATCGATCCGGTGGCACTTAGACATTTCACGT
CATTTTAACACCTATCAAACTCAAACTCAGTCCCCCAAGGTATTTCACGG
TTGAAATAATCTACgagtaatcaggactgattgagCTCTTATAACAACTT
CCTATTGGTCAGGAATTATCTtcgtaatctcatggttgatttaaattcga
ttgacgtttatgcttacgttaatttgtaatttcccgcgaacttgtaattt
ccctcctagattttgtaatttcccgcaaaatgaaattttcatcgtttgca
aattcatcacctttttcgactttcttactaactttaaaggcttaattaag
taaatggaatactatccaattaaaactcgattcgcgtttctatgactttt
ttgagacctctttaaattttcagattgatttccagtgttaaaattgacgt
ctttcagaattgttagaatttcaatccaaaccatgagattaacctagaat
cccatgcttgttttcgtgaaattctggataaattaccctcggtcaaattt
ctcgttgcactcgggaaatttcaaaaaatttcaaaattgacctcgggaaa
tttatcccgaatttcccttataaccatgagattactagtacgaATGTTTG
ACCAATCCCTATGGTCATGCGACGTCTTATGGACATTCAATGGACGGCTT
TAAGACCTTTGGATAtcctagaaacgtacattagacgtccaaaagGCATT
TGTGTCCATTGAGATAGGGTTATCCCATAACTCCTGATTACCGTAATTTC
ATTTCGACCGTAAAATGCAGCTATTGGCACGAGTTGAAAGGTTGATTTTC
TGGAATGAGTTTTTGCAGTAGACTGAATTCCGATGGTtctaactataaac
cctcgaatgtgacagagcccgattttcaaaaaaaaaaaatttggggcaaa
tttgggccaaaaaacggctaaaaacgggttttttgggctttgtgaaaaat
taggtcgttaattttttctgattttttgcatgaaagtagggtaccatcgt
aggtaaaagatggtttaagcagatttttgcaaaaatattttgttggctca
aaaaacgcatgtttatctataagaatcactattaataagcatacatcaat
gttcttagtcaaattactcaat Coding sequence (CDS) from alignment at sc0000097:397807..411078+ >TCONS_00009585 ID=TCONS_00009585|Name=TCONS_00009585|organism=Clytia hemisphaerica|type=CDS|length=5490bp|location=Sequence derived from alignment at sc0000097:397807..411078+ (Clytia hemisphaerica)
ATGGAGACCAcacttgttttgaaaatatttggagcaattattttgttttt
tgtcacttttctttttacattgCTTCCATACAAATTAAAGCAGATGCGTG
CAgacaaattgaaaattatttcttgcttcTGCGGTGGTCTCTTTCTTGGG
TTAAGTTTCCTTCACTTGATACCAGATACTTTGCGAGGATTTTTTGGTAG
TGAAATTTTACTCAAACTCCAAAGTAAATATCCTTTTGGAGAGTTGGTAA
TCATATTGGGAATGATCTTGGTTCTGTCTGCAGAAAAGTTTGCTAGCCTC
ATCCAAATCAACCAccaggaaaaaaaaacaaaatgtgatGGCAGTGAAAG
TTGTTGCCAAGAAGAATGTGCCGTACAAGGAGTTCCAAATGAGAAAACAC
CACTTTTCAAGCAACTGAGAAAACCATATGTGGAAGATCAGACAGTAGAA
GCAGTCCCATCAAACGAGAAAGCTCAGGAAGCTGGGACTACTGGAGAGGC
TGATAAAATGGATTCTGATGATGATTCTTCAATATCAATTGAGGATAAGA
AAACTGTTTTATTTACACAAAGTAACCAGTATAGAAAACTATCAACTACA
TCAAACACTTCAATGGGAAacaaaattcaacttttaaaaatcagaaCCAT
CTGTTTGGTTATCGCACTCATGATTCATTCCTTGTTCGAAGGTTTGACAG
TTGGTTTGCAGCCTAATGCAACAGGTGTCTGTGTGCTGGTTGCTCTTTTG
TTGTTCCATAAATCGTTAGTTGGATTCTCATTGGGTATTGCTTTGGTCAA
TGATAAAAGTGATCTGAGATCCTTCCAAAAGAAAGCTGCACTCTTCTCTA
TTGCATCCCCGATTGGAGCTATCATTGGCATTATCATTTTCAGCGTTAAA
TCAAGCTTTGTAAGTGACGAAGTGGTTGTTGTGCTCACAGGGCTCTCCAC
TGGAACTTTCATTTATGTGACCTTCTTTGAAATCCTTGGTAAATGTTTAG
AAGGAGATAAGATGGAAGACATGATTGGATTTGGTTGTTTTTTGTTAGGC
TTTGGTATGTTTGCTGGAATCACTGCAGTACCACAATTCCAACATTAAAT
GGAGACCAcacttgttttgaaaatatttggagcaattattttgttttttg
tcacttttctttttacattgCTTCCATACAAATTAAAGCAGATGCGTGCA
gacaaattgaaaattatttcttgcttcTGCGGTGGTCTCTTTCTTGGGTT
AAGTTTCCTTCACTTGATACCAGATACTTTGCGAGGATTTTTTGGTAGTG
AAATTTTACTCAAACTCCAAAGTAAATATCCTTTTGGAGAGTTGGTAATC
ATATTGGGAATGATCTTGGTTCTGTCTGCAGAAAAGTTTGCTAGCCTCAT
CCAAATCAACCAccaggaaaaaaaaacaaaatgtgatGGCAGTGAAAGTT
GTTGCCAAGAAGAATGTGCCGTACAAGGAGTTCCAAATGAGAAAACACCA
CTTTTCAAGCAACTGAGAAAACCATATGTGGAAGATCAGACAGTAGAAGC
AGTCCCATCAAACGAGAAAGCTCAGGAAGCTGGGACTACTGGAGAGGCTG
ATAAAATGGATTCTGATGATGATTCTTCAATATCAATTGAGGATAAGAAA
ACTGTTTTATTTACACAAAGTAACCAGTATAGAAAACTATCAACTACATC
AAACACTTCAATGGGAAacaaaattcaacttttaaaaatcagaaCCATCT
GTTTGGTTATCGCACTCATGATTCATTCCTTGTTCGAAGGTTTGACAGTT
GGTTTGCAGCCTAATGCAACAGGTGTCTGTGTGCTGGTTGCTCTTTTGTT
GTTCCATAAATCGTTAGTTGGATTCTCATTGGGTATTGCTTTGGTCAATG
ATAAAAGTGATCTGAGATCCTTCCAAAAGAAAGCTGCACTCTTCTCTATT
GCATCCCCGATTGGAGCTATCATTGGCATTATCATTTTCAGCGTTAAATC
AAGCTTTGTAAGTGACGAAGTGGTTGTTGTGCTCACAGGGCTCTCCACTG
GAACTTTCATTTATGTGACCTTCTTTGAAATCCTTGGTAAATGTTTAGAA
GGAGATAAGATGGAAGACATGATTGGATTTGGTTGTTTTTTGTTAGGCTT
TGGTATGTTTGCTGGAATCACTGCAGTACCACAATTCCAACATTAAATGG
AGACCAcacttgttttgaaaatatttggagcaattattttgttttttgtc
acttttctttttacattgCTTCCATACAAATTAAAGCAGATGCGTGCAga
caaattgaaaattatttcttgcttcTGCGGTGGTCTCTTTCTTGGGTTAA
GTTTCCTTCACTTGATACCAGATACTTTGCGAGGATTTTTTGGTAGTGAA
ATTTTACTCAAACTCCAAAGTAAATATCCTTTTGGAGAGTTGGTAATCAT
ATTGGGAATGATCTTGGTTCTGTCTGCAGAAAAGTTTGCTAGCCTCATCC
AAATCAACCAccaggaaaaaaaaacaaaatgtgatGGCAGTGAAAGTTGT
TGCCAAGAAGAATGTGCCGTACAAGGAGTTCCAAATGAGAAAACACCACT
TTTCAAGCAACTGAGAAAACCATATGTGGAAGATCAGACAGTAGAAGCAG
TCCCATCAAACGAGAAAGCTCAGGAAGCTGGGACTACTGGAGAGGCTGAT
AAAATGGATTCTGATGATGATTCTTCAATATCAATTGAGGATAAGAAAAC
TGTTTTATTTACACAAAGTAACCAGTATAGAAAACTATCAACTACATCAA
ACACTTCAATGGGAAacaaaattcaacttttaaaaatcagaaCCATCTGT
TTGGTTATCGCACTCATGATTCATTCCTTGTTCGAAGGTTTGACAGTTGG
TTTGCAGCCTAATGCAACAGGTGTCTGTGTGCTGGTTGCTCTTTTGTTGT
TCCATAAATCGTTAGTTGGATTCTCATTGGGTATTGCTTTGGTCAATGAT
AAAAGTGATCTGAGATCCTTCCAAAAGAAAGCTGCACTCTTCTCTATTGC
ATCCCCGATTGGAGCTATCATTGGCATTATCATTTTCAGCGTTAAATCAA
GCTTTGTAAGTGACGAAGTGGTTGTTGTGCTCACAGGGCTCTCCACTGGA
ACTTTCATTTATGTGACCTTCTTTGAAATCCTTGGTAAATGTTTAGAAGG
AGATAAGATGGAAGACATGATTGGATTTGGTTGTTTTTTGTTAGGCTTTG
GTATGTTTGCTGGAATCACTGCAGTACCACAATTCCAACATTAAATGGAG
ACCAcacttgttttgaaaatatttggagcaattattttgttttttgtcac
ttttctttttacattgCTTCCATACAAATTAAAGCAGATGCGTGCAgaca
aattgaaaattatttcttgcttcTGCGGTGGTCTCTTTCTTGGGTTAAGT
TTCCTTCACTTGATACCAGATACTTTGCGAGGATTTTTTGGTAGTGAAAT
TTTACTCAAACTCCAAAGTAAATATCCTTTTGGAGAGTTGGTAATCATAT
TGGGAATGATCTTGGTTCTGTCTGCAGAAAAGTTTGCTAGCCTCATCCAA
ATCAACCAccaggaaaaaaaaacaaaatgtgatGGCAGTGAAAGTTGTTG
CCAAGAAGAATGTGCCGTACAAGGAGTTCCAAATGAGAAAACACCACTTT
TCAAGCAACTGAGAAAACCATATGTGGAAGATCAGACAGTAGAAGCAGTC
CCATCAAACGAGAAAGCTCAGGAAGCTGGGACTACTGGAGAGGCTGATAA
AATGGATTCTGATGATGATTCTTCAATATCAATTGAGGATAAGAAAACTG
TTTTATTTACACAAAGTAACCAGTATAGAAAACTATCAACTACATCAAAC
ACTTCAATGGGAAacaaaattcaacttttaaaaatcagaaCCATCTGTTT
GGTTATCGCACTCATGATTCATTCCTTGTTCGAAGGTTTGACAGTTGGTT
TGCAGCCTAATGCAACAGGTGTCTGTGTGCTGGTTGCTCTTTTGTTGTTC
CATAAATCGTTAGTTGGATTCTCATTGGGTATTGCTTTGGTCAATGATAA
AAGTGATCTGAGATCCTTCCAAAAGAAAGCTGCACTCTTCTCTATTGCAT
CCCCGATTGGAGCTATCATTGGCATTATCATTTTCAGCGTTAAATCAAGC
TTTGTAAGTGACGAAGTGGTTGTTGTGCTCACAGGGCTCTCCACTGGAAC
TTTCATTTATGTGACCTTCTTTGAAATCCTTGGTAAATGTTTAGAAGGAG
ATAAGATGGAAGACATGATTGGATTTGGTTGTTTTTTGTTAGGCTTTGGT
ATGTTTGCTGGAATCACTGCAGTACCACAATTCCAACATTAAATGGAGAC
CAcacttgttttgaaaatatttggagcaattattttgttttttgtcactt
ttctttttacattgCTTCCATACAAATTAAAGCAGATGCGTGCAgacaaa
ttgaaaattatttcttgcttcTGCGGTGGTCTCTTTCTTGGGTTAAGTTT
CCTTCACTTGATACCAGATACTTTGCGAGGATTTTTTGGTAGTGAAATTT
TACTCAAACTCCAAAGTAAATATCCTTTTGGAGAGTTGGTAATCATATTG
GGAATGATCTTGGTTCTGTCTGCAGAAAAGTTTGCTAGCCTCATCCAAAT
CAACCAccaggaaaaaaaaacaaaatgtgatGGCAGTGAAAGTTGTTGCC
AAGAAGAATGTGCCGTACAAGGAGTTCCAAATGAGAAAACACCACTTTTC
AAGCAACTGAGAAAACCATATGTGGAAGATCAGACAGTAGAAGCAGTCCC
ATCAAACGAGAAAGCTCAGGAAGCTGGGACTACTGGAGAGGCTGATAAAA
TGGATTCTGATGATGATTCTTCAATATCAATTGAGGATAAGAAAACTGTT
TTATTTACACAAAGTAACCAGTATAGAAAACTATCAACTACATCAAACAC
TTCAATGGGAAacaaaattcaacttttaaaaatcagaaCCATCTGTTTGG
TTATCGCACTCATGATTCATTCCTTGTTCGAAGGTTTGACAGTTGGTTTG
CAGCCTAATGCAACAGGTGTCTGTGTGCTGGTTGCTCTTTTGTTGTTCCA
TAAATCGTTAGTTGGATTCTCATTGGGTATTGCTTTGGTCAATGATAAAA
GTGATCTGAGATCCTTCCAAAAGAAAGCTGCACTCTTCTCTATTGCATCC
CCGATTGGAGCTATCATTGGCATTATCATTTTCAGCGTTAAATCAAGCTT
TGTAAGTGACGAAGTGGTTGTTGTGCTCACAGGGCTCTCCACTGGAACTT
TCATTTATGTGACCTTCTTTGAAATCCTTGGTAAATGTTTAGAAGGAGAT
AAGATGGAAGACATGATTGGATTTGGTTGTTTTTTGTTAGGCTTTGGTAT
GTTTGCTGGAATCACTGCAGTACCACAATTCCAACATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009585-exon-sc0000097-1491911889:397807..398120 | TCONS_00009585-exon-sc0000097-1491911889:397807..398120 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1510915933:397807..398120 | TCONS_00009585-exon-sc0000097-1510915933:397807..398120 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1575043694:397807..398120 | TCONS_00009585-exon-sc0000097-1575043694:397807..398120 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1491911889:398453..398699 | TCONS_00009585-exon-sc0000097-1491911889:398453..398699 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1510915933:398453..398699 | TCONS_00009585-exon-sc0000097-1510915933:398453..398699 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1575043694:398453..398699 | TCONS_00009585-exon-sc0000097-1575043694:398453..398699 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1491911889:398894..399345 | TCONS_00009585-exon-sc0000097-1491911889:398894..399345 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1510915933:398894..399345 | TCONS_00009585-exon-sc0000097-1510915933:398894..399345 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1575043694:398894..399345 | TCONS_00009585-exon-sc0000097-1575043694:398894..399345 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1491911889:401108..401290 | TCONS_00009585-exon-sc0000097-1491911889:401108..401290 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1510915933:401108..401290 | TCONS_00009585-exon-sc0000097-1510915933:401108..401290 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1575043694:401108..401290 | TCONS_00009585-exon-sc0000097-1575043694:401108..401290 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1491911889:409687..411078 | TCONS_00009585-exon-sc0000097-1491911889:409687..411078 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1510915933:409687..411078 | TCONS_00009585-exon-sc0000097-1510915933:409687..411078 | Clytia hemisphaerica | exon |
| TCONS_00009585-exon-sc0000097-1575043694:409687..411078 | TCONS_00009585-exon-sc0000097-1575043694:409687..411078 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000097 | supercontig | sc0000097:397807..411078 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR003689 | ZIP |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030001 | metal ion transport |
| GO:0055085 | transmembrane transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046873 | metal ion transmembrane transporter activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0030001 |
metal ion transport |
| biological_process |
GO:0055085 |
transmembrane transport |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0046873 |
metal ion transmembrane transporter activity |
Blast
The following BLAST results are available for this feature:
|
