TCONS_00009533 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009533
Unique NameTCONS_00009533
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1228

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009533 ID=TCONS_00009533|Name=TCONS_00009533|organism=Clytia hemisphaerica|type=transcript|length=1228bp
gaggtactcGCTACGGGCATATCtacaaaagtgatttttttattgcTGCG
TACAAACTGCGTATAAAAAACACAGAACGGCACTGATACTGCGACCGCCT
AACAAATTAAAGCGTGTCTTTTTCCATCATAAAGTGAAAAAAGgtaAAGT
GTCAAGGAGTTGCACAAAGTTCAATTACACTAGTGAGCCATTATGGGACA
ACCTTCCAGATTGTGGATGTACTATAGATGGATTTCCTAAGCTTCTAACG
GACGAAGAAGATATGACTTATGAATTGATGGATGCTGATATTACGCTTGT
CCATCAGCATTATAACATCTCACCAAGTAGCATCCAACATTTCAATGTTA
TAATGCAATACCTTAATTTAACCCTGAAAATGCTGAGACATGATAATAGC
TCGGAAGGGAATTTCGTTTATCAAACTGAAGAATGGCGTAGAAAGAATTA
TCATTTCATAGATCATATGATGAAAAGCATTGCAGTGATGTCACAGTCTC
CAAGGTTTTGTGTGGAAGAACAACATAAACAGATGGATTATATTTTCTTG
ACATTGATTCCTGCTTATAAATTTAACACTCACGGATATAAAGCAAACAC
CGTTTCTTTGATGAGAGGTTTAAAAGGAATTGGAAAGGAAGATCTCCTCA
CTAACAAAGCGGTTGAAATGGCGAAAGAAGATTTCTCCCTCAGACGAGGT
AAACTTCAGATGGGGATGGATACCGAAGGAAAAGCTCCTAAAATAAAGTC
ACCATTGACGACTGAAATGGCATCTTCAATTAAACTGACCACTTTGGATA
CGCTGGAAGAAGTGTTATCAGCTATCAGTATCGTTAGCTTGGGCATCGGT
TTGATTGCTTTTAGACTTGTCAGAAACCAAACAATGAGATTGTTTAATCA
TCAAAATCTGATGCTATCTTTTCTGCTCAATGGATTAATTTACAAAATTC
CACTTTGGTTTATCAGTAATCTGCCGTCAAAATCACAGggCGGATGTATG
GCGGTATCAGTTTTGTCGTATTTTTTCACCCTCTGTTCATTCTCTTGGAT
GATGGTTGAAGGAATCAACATTGTTATCATTATGGTTTTTGTATTCCAAT
GGAATGGAAATTACCACAAACAGTACACTGCATGAAAAGTTGTCTTCTCT
AACGCAAGATATAtgacgaaaagttaacttttctctcaattttcttgttt
tgaaatcattgaattttCTTCTGTGCGA
Run BLAST on NCBI

transcript from alignment at sc0000095:561463..578025-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009533 ID=TCONS_00009533|Name=TCONS_00009533|organism=Clytia hemisphaerica|type=transcript|length=16563bp|location=Sequence derived from alignment at sc0000095:561463..578025- (Clytia hemisphaerica)
GAGGTACTCGCTACGGGCATATCTACAAAAGTGATTTTTTTATTGCTGCG
TACAAACTGCGTATAAAAAACACAGAACGGCACTGATACTGCGACCGCCT
AACAAATTAAAGCGTGTCTTTTTCCATCATAAAGTGAAAAAAGGTAAGTC
TCCCCAGGAATGAGAAAGTTCCGCCATGTTACAACATTAACCCTATTCGC
ACTAGGGGGTGGCTTTTTCTGTTCGTGGTTATGTTAATAACTCCTGAAAT
AAGAAAGCTTTAGACATGAAATTTTCTATAAATTCCTAACTTCTACTTTA
CTTCAAAAGGAAATAGTTTTTGACACCTAGAAATTTTCACACCTTGGCCA
TGATGACATCTCTGACAGTAAGGTGTCATAAAATTTGATACATTTCCCAC
TGCGATCTTTAGAGCGAGGGGCAAATCACTAAAATAAATCTCGTACACAA
TTTTATAAATTAAAAATAAATCAAAAATAAATCAAAAATAAATCAAAAAT
AAATCAATAAATCAAAAATAAATCAAAAATAAATCATAAATCAAAAATGA
ATCATAAATCAAAAATAAATCAAAAATAAATCATAAATCAAAAATAAATC
AAAAATAAATCATAAATCAAAAACAAATCATAAATCTCGTATACCATTTT
TCGAGTGATGTTTAAAAATCGGGGAAATCGAAAGTCAATTTTTGTAATAA
GTGCTGTTCCTTATGTGTACAATTTAAACACAGAAATTTGTTTTAATGAA
GGCTGCTCAAAATCGGGTTTGGAAATGTTTGATTTTAGATCCCTCAAAAT
CCCGCCATATCCCGCGTAAGCTCCCTCGAAATCGGAATTGGAATAATTCC
CGATCAGGAAAGAGTAGTGCTCTGAAATTTTCACTGGATATCCGTTTTAT
TGTTCTGTATAGGATAAAGGAAAAATCCTATTTTTAAACTTCATTAATTT
TTCTTCACAACCAAAACTGAGCATTTTTTGAATTCGATAAATCCGATTAA
AGATCGCCGTGTCCAGTACAAAATTATTTCTTATGTCAGATACACGGTTT
TTATAATAGGACCAAACTATATAAGAACATAAGGCTTCGATGGCCAAAAT
GTTAAGAACAAGTTAGGAATATTTTAAGGCTTAAAGGCAGGTGCTAAAAT
CACCTGAACTTTTCGGAATATGGACAAAAATATTCAGAAAGGGGTGAAAA
GAAGAACATGTTAAGAGCATTTTTAGGCTTGAAACTCAAAAAGTTAAGAA
CATCCGAAGGCTTCAAAAATAGAACAAAGGAAATTTTCGATTTTTATTCA
CTTTTGTCATGATGAGTGACGTCATCAAAAAAATTATTTTGTCAAAAGTT
AACTTGCATGACAAGGATCTTGTGTGTCGAATTTCATCCATTCAAAAAAA
CTATATAGATCAAAAGTTAAGAGATGGTACAGGAAAAGCCCCCTCCCCTA
GTTCTAAACCGCCCCTAAAAGCCTAGTATGAATAGGGTTAAAATCGTTTT
TTTTCCTAAATGACCGTTATCTGTCTCTATACAAAAGGAGACCCTATGTC
TAATGCATAACGTTAAACCATATTAGCGATAAATCTTTTTAAAACGAGGC
TAGAAATGATTTTATGCATTTTCAGCAAGAGGATTGTGTAATGGAAAATT
TCTGCAATTTCTTTAAGGTCCTTTGTGGTGTTGTACAGAATTTTTTTTTG
GGAATCTTTCTGGGACACTAGATTGTTTAAGAGTATTAACTCTCATATTT
CTTGTTGAAGCTAAGATTGGGTAATCTGATCTAGGCGGTAAGTTACTGGG
AGCTGAGAGTAGGTGTGGCGCTCCACCTCAGCATTACATCTTCCAGGTCT
AGCGCAAATAGAAAAGGGGATAGATTCCCTCACTCCCGGTTCCGCCGACA
GCCACTATATAAATATACTTACTTACTTACTTCTTGTTGAAAATTTTAGG
TAAAGTGTCAAGGAGTTGCACAAAGTTCAATTACACTAGTGAGCCATTAT
GGGACAACCTTCCAGATTGTGGATGTACTATAGATGGATTTCCTAAGCTT
CTAACGGTACAGTATACAATCTATCTATACCTTCAAAGGTTTTGTTTAAA
GGGACACAACAGTACTTGCGAAATTTGTAAACAAACTGTATGCAGCGGAT
ACAAAATCAAAACAAATGTGACATGTCAAAATAAAAAATCAAACCAAATA
TGGCTNCGTTTGCTTATTCATCAATTTTAATTCACAAGCTTTTTCACATT
GGATTAACACAGATGTGGAGCAAGATTGGTCAGAAAGAGGAAAAGAAAAG
CAGTTTTTTTGCTTATATCAGCATTATCTAACAATAGGAAGTCACTGTCC
TAATATGAAATATGTGTCTGATATGAAACGGGAATACTTATGTAAAAATA
AAACCTTTAAAGCCAGTAAATCTTTGACGAGGCTCAGTTATTTTCATTTT
TAAGTCTATAGTTACATCATTATTCAACCCTGGTATACTCGACCCAATCC
CTTTTATGTTACACGCTTTCTTTATTATAAGAACGGTGTTTTTTTCAATC
CACCATGGATATTCTTAGCTTTTTGTGGTGAAAAATCATTCTGAAATATT
CTGACAATATTCTTAGGTCTGGATCAAATCCCAGCCAAAAAATCTAACAT
GCAATACACCTTAAAGCAAAAATCTGCCATTTTTGTTAAACCAATTAGCT
TTTGCTGGATAAAAATTAGCCATACAATGGTAAAATCCTCTAAAAATGGC
ATTTTTAGGTTCTGTTGCCAAATGATGGTGGTGTTCTTACCCTATTAAAA
ACTTCAAAAAAATTGGGTGTTCTTGAAAATAAAATGCGTACTTGTCACAA
TTTCAATTAGAATATCCATGAGCAATAGACAAGATACATATCTCACTGCC
CCGGTGAGAGTTTTTCCCGCAGTGGAGATGAAAATTTCTCTCAAAATCTC
AAGGGGGATAGAAACTCTATTGTTCCAAAGTCCAAAAATTTAGTAGGGAT
TGTTTTGGAGTGTATTTTCAAAGTAAAAAATAACCAAAGTCAATTTCCCA
ATGGAATTGTAGAGTAATTTTCCCATTGGGGACATAATTTTGGCCAAATT
ATCCAGTAGCGCTTACTAAATCCCAACGTGTCTATGACACGGGGGTGTCA
ATAAGCTTCTTTAGATGGAAGTGGTAATGAACCGGGGGTTATCAAGTGTG
CGAGATGACGGGTATGTCCAAGCCAAAGTTTGAAAATCGACCCTTAGAGA
GACTGAGTTTAGAAAACTTCAGCCAAAATTTTCGTCTAAATTTCAAGAAT
TTATGACCCTTTGAGGGAGCCGATTTTTGATTTTGGAACCCTTACAGAGG
TCGGTTATTGAATGGTTATACATTTTGAAGGACTTTCGAGAGTGTGAAAA
AGGGGCCCTTAAGACTATCACATACCCGGCAACCATTTTGCCTTAGCACC
CAATCCCTGATGGGGGTGCTGAAAACAATTTGATTTTCTTTCTAGGACGA
AGAAGATATGACTTATGAATTGATGGATGCTGATATTACGCTTGTCCATC
AGCATTATAACATCTCACCAAGTAGCATCCAACATTTCAATGTTATAATG
CAATACCTTAATTTAACCCTGAAAATGCTGAGACATGATAATAGCTCGGA
AGGGAATTTCGTTTATCAAACTGAAGAATGGCGTAGAAAGAATTATCATT
TCATAGATCATATGATGAAAGTAAGTACAATGCAATTTATTATAAAATAA
ATCTGCGCAGAAACAAAAAAAAATCTTTTTTGAACGAGACCATCCTATTG
TCTACACAATGTCACTACAAAGTGGATAATACCCCCATCCAACAGACCCG
GTGGGATTTTTCAGCCAGTGGTGTTAAAAATAAAAGAACCAAAACTCAAT
GGGGATTGATATTCTTACTTTTTTAAAGGCTGGGGATTTGAATTCCATTG
TTTTGAGCCAGAAAATTCAGTGGGGAAAATATTTTGCAAGGAGGATTTGC
TTGTCTGATTGTTTTCAACGGAGACAAAAATTAGAGTATAATTCTTCCAC
TGGTGACGATATTTTCACCAATTTTTCCAGTGGGAAGGGGTCCCAGTTGG
TGTGTGAGAAGGGGATGTCATAATTGAAATATGAATTAACAACTTTACTG
AAAATTGACCGGTTCCTTGGTACCATTGGAAAGCTATTTATATACTCTTT
CTAAAACATCGGGTTTATGCCCCTTTAAATCAAGTGACCAGGAGCTATAG
CCTCAAGTCTGAGGCTTGATATTTTGGCTTGTCTTGGACGCATATACGTG
TCCCTCGTGGTCTAAGGGTTAAGGGTAACATAAAACATTTTAAACTCAGG
CAACTGTTGTTAGTTTACAATAGCTTAGCGGAAATTTCAAACTTTTGCTC
ATAACAAGGATCTTGTGTACCTTTTTTCATTAAAAAGAGTAACTACTGTA
AGATCAAAAGTAAATGAGTTCTAATAGCCCCTGGTTTTTAACCGCTCCTA
AAAGCCTAGGGTTAAGCTGCATTACTTGACTTTTAATTTCTTTCCTTTTA
TTCAACATTGCTTTACCTATAGAGCATTGCAGTGATGTCACAGTCTCCAA
GGTTTTGTGTGGAAGAACAACATAAACAGATGGATTATATTTTCTTGACA
TTGATTCCTGCTTATAAATTGTAAGTTACACGTTTTTTTTATTTCGCCTA
GCGAAAGTATTACGATAGCCTTTCGCGGCGGCGGCGGCGGCGGTGTAATA
AAAAATTTAGAAAACGAAAGTGTTTCATACAGTGGACGGACTCACTAAGC
TTAGTTGAAATAATAATGTTAGGTAACTCACAAGTTCGTGTAACCACGAC
CCTTTTCGCGCGTTTTTTGATACTGGGCCTGATATTGTAGAGATTTCGCG
CGTTTTTTGATACTGGCCTGATATTGTAGAGATAATAAGTTAATGAATGA
GTTATTATAAGTTGTATCATTAGCTCCACTGTTTCAAGCGCACAGATATT
TTTTCGTCATAAGAAACTATCTGTACGTACAACGTGAAGCCCATATTTTT
CAAGTGTGGGCTATTTCTTGTAGCTGTGCAATTCCAATTCATTTAAAGCA
ATACTTTTTAAGCTGATTAACAATCCAAAATCTTATCCATCAAGAAGACA
TAGTAAGTATAAACCTTTCAACTTTGCTTTGCCAGGTCCACATAGATTTA
TTTATCTAAAGGATCTGTTTGAAGCACCTTTTTTGCCTCTTCACTTTTTT
GNGACATAGTAAGTATAAACCTTTCAACTTTGCTTTGCCAGGTCCACATA
GATTTATTTATCTAAAGGATCTGTTTGAAGCACCTTTTTTGCCTACACTT
TTTTGTGATTGAGATTTTTTTTTTTGCCATTCTCAGATTCGTTCACTGCA
GTGAATCTGATTGTGGTTTTTTTTCCCGCCCTTCGGATTTATGCGCGGTT
CTCGGCCACTGAATCTGATTGAGGCAACCCGTGGCCAGGACAGGTGTGGA
TTCTGTGCCTGCGACCGATCGAGCTTGTACGTATCGACAGCTCTTAAAAT
TCAACTGCATTGTCAGTTAACAAATACAAAGAAAACAAAACTTTTACAAG
TATATTTTTGAAGAAAATATATATTTTATTTATACTAATACTAATACTTT
TTACTAAGATACTTTTATACCATAACTCAGTTAGCCAGTTTATCTGTGTT
TGTGCTTGAAGATGATATCTATTGCATTATATCGTGCACGCATAGGAAGC
TTTGCTTTTACAGCTCAAAAAAACGTGAAATGTATTGCTAAATCTATTAC
TGTTGGTTCCGACTTTTCCAATAATGCATTCTCGAAACTTCTTAGACCTG
TTCGTTTTATAACACTTTTTACCCTGCTATGTTTTGCAATTCCAAAATCG
TTTGAGCTAACTGAGCTTAACACACCTTTAGATTTTCTTAATCTTTCAAG
AAATGGAATTTTTGTTCAATATCCCAATGTAATGGGAGATGCGAACCTTA
TTTTTTTCAAAGTAAATTACACGCTTTTACTATCAGGTGATATAGAACTC
AATCCTGGTCCAAGTGTTCAAGGTTCATTTCATCAGGGCAACAGTAAATT
TGGTCAGACTGCGGGTATACAATGTTCCTCAAATTGTTTTTTTGCCATTT
GCTATGCTAAGTTTAGAAAACTATCACTATGGGAAACTCATGATTTGGAT
TACGTTTTAGAACAAGGTGATTTGAATTTTAAAAAGTTGGGTATTACAGG
GCAGTCCCCATACATTGAACAGTTTTCCAAGACCATTGATATAGGAGATA
GCACTTGTGCACTAAATTTCAACATTTTTGAAGGCTTTTTTGAGACTGGT
AATATTGCAGTGAATTTTGTTCAGGAAGAACTCCTAATGCAGCATTCTGG
TGCAGTTTTAGTAATAGCTGGAAATTGCCTAGCTGTAATGCACTACAACA
AAAAGTATTTTCTTTTTGATCCACATAGTAGAGATTCTTATGGTCATCAA
GTTGAAGGGGGCATTGGAACTTCAGTTCTTTTAAAATTTGACAGTACACA
AGAAATTAAGCGATATATAAGGTCAGAGTATAGTAATACCAATCTTTTTA
ACATCATTTATCTAAAAACTGATTTTCACAATGAGAAAGATATAGAAGGT
ACAATTTTAACAAAAGTCTCACGCAGACAAATAAATGCTTCTGTTAAGAG
GTATCGTGAAAAAATGAAAGGTACTGAAAAGCATGAAAAAGAAAAAGAAT
CAAAACGCATACGACGAGAATTGAATAATGGATCAGAAAAACATGAAAAT
GAAAAAGCATCAAAACGTATGGGACGAGAACTGAATAAGGGATCAGAAAA
ACATGAAAATGAAAAAGCATCAAAACGCATGCAACGGAAACTGAATAAAG
GATCAGAAAAACATGAAAGTGAAAAAGCATCAAAACGCATGCGACGAGAA
CTGAATAAAGGATCAGAAAAACATGAAAATGAAAAAGCATCAAAACGCAT
GCAACGAGAACTGAACAAAGGATCAAAAAACCATGAAAATGAAAAAGAAA
GAAAGAGAAAAATTTACAAAGCTAACAAGAAACTTCATGTAGGAAAAAGA
GTTGAGAACTTCAGACAGAAAAAACAAGAGGGTCCTTCTTACATTTGTGT
AATGTGTAACCGCAGCATGTTTAAAAGATCTGTGATAGGTTTTGATGAGC
AAAAGTACTCATTAATTAACTTTGAAGAAATAGAAAATTTAAATCCTGTA
ACTTCCTTTGATGGTAACTTCTATGTATGTACAACCTGTCATAGTAAACT
AATGAAGGGTGAAATCCCATGTCAGTCTGTTTCTAACAAGCTTCAAATTT
TTTATCTCCCAGATAATCTAAATGATATACGAAAGCTGGAAAGAATTTTA
GTGGCTCAAAGAATTTTATTTTCAAAAGTCATGATAATGCGTAAAGGAGA
ATTCNTGTAAAATTCAGAAACAATAAAGCAGAGCTAATTTATGTTAAACT
AGACGATGAAACGGCTGGAATAAAAGCTCAAAGTAAAGACCAATATGCTA
AGGCCACTGAAACTGTTCCCATTGAAAAGAGTGAGGTAAATTTTCCCTTT
GACAAAAAAANACTTCACCTATTATTTCTCGGACACAATTTCCTCTTAAG
CTAGCTTATGCTTGTACAGTGCACAAAGTTCAAGGATTGACTTTGGATTC
TGTAGTCGTTANTAAGGCAAAGAAAGTTCAATGCTGGTCAAATGTATGTT
GCAATGAGCAGAGTGAAAAATTTAAATAGTTTGTACTTTACTGGTCAATA
TCGACGTAGTGCTTTTGTCTGTAGTGATAAAGTTAGTGAAGAATACACAC
GATTGCGTCAGAACAAAGTTGAAAGAGTTGCAGATATTATGAGGTGCAGT
TCTAATTTAAATGTTTGCCTATTGAATGTAAGATCTTTAAAACGTCATGC
AGTTGATGTTCAAAGGGACAGATTTTTGTATGAAAATGATTTGTTATGCC
TGACAGAGACACAGATTAGTTATGAGCATTCTGAGGAAGACAAACAAAGT
ATTCATGAACAGCTTCCTTATTATATTCTTAGTCATAATATTGACCAGCA
TAAATTCAACAGTATTACTGTCTGTCATTCTCCTTCTTTTATTGACATTG
ATGAGTATGATCATTCATCATGCTTTTCTCTTGTAAAATTTAGAAAAGCT
GAATTTACTGAAAAGGAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGGT
TCTCTATAAAGGTTCAAGAATTCAACGTGATGTGTTCTGTTACAATCTTG
CTCAATTTATTGAAAGATACACAATTGATATCATTTTAGGAGACTTCAAC
ACAAACGGCTTTGAAGCGGATCATGATCAACTGTTGGCTGACATTCTCCA
AGATTATGATTTAGTTCCGAACTTTCCAACACATATCGATGGGAAAATGC
TTGATCAAATTTGGACACATAAGNAGAGGCTTTTTTTCTGCATTAACCAA
AAGGAGGGCTCTGTTGAATTTGACATTTGCAGATGAAGTTGGGGAGGGTG
TGAGAAATGGGTCAGATATATGTGAGTGTCTATTATGGATGGTCTATGGT
AGAAAAAAATCTATAGACAAAGGACAATTAGTTTAAAGATGCCTTTCATT
AATCAATTTTTGATTACTATCTCGTCAGGAAACTTACATACCTATGGATA
TGACATTTAATGTATTATTTTATTTATTGTATTATTTATTCCTATTTTTA
TATTATTTATTCCTATTTTTTATATTATTTATTCCTATTTTTTATATTTA
TCATTTTTCTTCTGTTTTTCATAATTATAAGATTTTTTTAAATTATTATA
TTCAAAACTAAGTAATATTTCTACCATTTTTTTAATAAGCTTTTGTTAAT
TGTTTTATTATTTTCTTGTATTCTATTTGTTATTCATTTGCCTACTCAAA
AATCAAAAAGACTGTCACAGAGTTAAAAAAATAGACAATATGGGAAAATA
TGGAATGAAAAAATATGGAAGTGCATTGCAAGTGAATTGATTCATCTATA
TATGTATGCATTTTGGTTGATATCATGAGGAAAATTAATGAAACGTTGAA
NATGCACCAGTATGGTATTGAAGTTATTCGTAAATGTGTGAACTTATCCG
ACCATGATGGAATCAAATTATCGCTGACTTTGCTAGCTTAGAATACCCGC
CAGAGGCGATTCCCGGCGGGACAGGGGGGGTTGGAAACTGGGGTGGTGGA
TGATCTCAACTTTCTGGTGATTAGTTTGAGTGGTTAGAATTGCAGAAAGT
AAACAAAATTATCTCAATAAAAGGGTATAGTACCCCTTTTCTCCTATAGC
AAATTCTATCTAACTTAAAAATTAATCACCAGAAAATTAGCTTACGATTC
AGATACGGTTGCTTATGTTGTCATAGGTGCTTCTTTATGAACAGTCTGAA
TTGATCAAAGGATTTTTTTTGTGGTTGACTGAGTAAACTAGGAATACTCT
TTAAAGCAATGATGTTATCGAAAATCTGTTAATATGATATCAGTACATGT
TTGATTCTTGAAAAAATGAACTTTGTAATTAAGGATTGAAGCTTAACTCT
GTTGGAAATATGCAATTAAGGTCATCCCACCACCCCGTCCATTCTTATGT
AAGTTTTCTGACNAATCACCAACATCGGTACTGCGTAATATGCGCAATGT
ATCATTATCATTTCATCCGATTTTCACAATATGCTGTATTTGCTCATTGG
AAACATAAAATTTGCTCATTGGAAGCATTTCTATAGTAGATCAACTGTCG
CGCTCAGCCATCAACCGACCATTGATAATACAAAAATAATAATTCTTATA
TCGCGATTTCCATGATTCCACTGTGACTTCTTCGACGTACGTATCCAGAC
TTGACCTCAATCTTCGAAATGTTTGGTGATTTGTTGCTGTTGGATAAAAA
GACGATTTGGTATGTAAACTTTGTATGGTTTGATTACTCGAAATGTGACA
TATGTAAACGAAACACTAAAAACTAATTTTTATTATTTTGGAAGCCGGAA
ATCCACCGGATGTGAAAAAAAGCCAAATTTGCACAATAGTACTTGTAGTC
TTATAAATTGCTAGCTATTTTCTATGAACTATGAACTATCGCAATTTCCG
AATTACAAATACTTGGAAATATAATTTTTAAATTAACAAGATCGAGACTC
AAGTTACCCCTTTTTGCCCCTTTTTGCCCCTTTACTAACCTGTATTTTCC
TGTTCATTAAAAAATGAAAGCAGATTTTCGGCTAGAATGAAAGAAAACTT
TTCTACAAATTGCTTGGAATCTTGAATTTTGTCTTGTTGAATTCAAAATA
TTGGATATTTTCGACCGGAAATGACGTAAAATGTTACCTTACCTTTCGCT
CTTAACGCACTTAAAATAGGTTTATGTTATTAATTTTCCGCATTCCTCTT
CAAGTTTTAATTGTGTGTATCATTGTTCTCCAAGAATTTCAATGTTCTTT
TCTTCGTCTTATTTAAGGCGAAATTTTCGACTTCTAGTCGTCTTGTTTTT
ATTAGAACCTAGTTTATAAGAACATATAGTCTGAAATTCGTCGAAAAATT
AAGAACATCCTAAGAACATGCCCAGCCTCAGTTTGGAAAAAAATGACAAG
AAATTACATTTTTTCCTCTTTTTAAGCAGTTTTAACCGAATTTTTGGATC
TTCAAAAGTCGAGAGTCAAATATTGTCCAAATTTTGCCAAATTTAAGTGC
TCTTTATTTTGTATCATATTGTCGATTTAGAGTAGTCTGAAAAATTAAGA
ACGCATTTAAGAACATTTTAGGCTGAAAATTGCTAAAAAAAATAAGCACA
TCCAGGCTCAGCCAAATTTTAGGTGTTCTAATAAAAAAAAAAACGTGTAT
TAGTCTAAAGTTCCGGTGTCACAGGTAATAATAAGTACTCCTCGAAAAGT
CCCCAGTATTTATTTATTATTTATTTACTTATTTTTATTTCTTTTATTTT
TATTTTTAACATTATTATTTCCTTGATCTCCAAAAATATTGGTTCTTCTT
ACAAGAAAAGTGTCATATAATGTATATGTTGTGTGTATAAAATATATAAA
TAACTAACAACTCGAACAGATACGGGAAGAAGGACTCATCGGAAGGAATA
AGGAAAACTAAGAGATGTTCGGAATCAGAATACTGAGATATGACGTTTGG
AAGTTTGTTCGATTAGTTTTTTATGTAAAAAATAAAAAACAGACAGACAG
ACAGACAGACAGACAGAATACCCAAGAATATAATGATACCATTTCAAATT
CCAGTAACACTCACGGATATAAAGCAAACACCGTTTCTTTGATGAGAGGT
TTAAAAGGAATTGGAAAGGAAGATCTCCTCACTAACAAAGCGGTAAGAAT
TTCATCATTCCTTTTTCTGCTTTTCTGATTATGAAAATACATCCGTTCGT
AAAGGCCGGTCTCCACTTGCGCGCGCTTCGATCGCAATTTTTCAAGCAAA
GCTCCCACGCTATTATGGTCAAAAGAAAAGTGAAGCAACTCCACTGACTC
GATATGACATAACCGTTGCAAAAAGTTAAAATGTGCTCAATTTTTTTTCG
AGCGCGCCCTTCCATTCATAAAATTCTTTCCTTCCCTCATAAAATTTTTC
ATCTTTTTTCCAAGCAAAAAGGATTGAAGCCAAAAAAGTGCAATCGAAGC
GCGCGCAAGTAGATACCGGCCTTAACTTCCCCTTGTATGAATATTTGCGT
TTTTAAATACACAGGTTACCTTAAGTGGATATTTTCACCCTTTACACGAA
ATTTATAGTCCTCGCAAATTCAAAATTTCGAAATTTAGCTACTAAAACCC
CTTTGGAAAACAAAAAAAATATATATGAAAAGAAGACAGATTCGGAAACT
TTAATCCACGCGAAAATTTGAGATTCTTGATTAGCGAAAAAAAAATGCGA
AGATTTGAGACATAAAGTTTGCTCTTAAAAAGCGGACAAATTTTTATATA
AAGTAAAATCCAATGCATAGCAATGTGCCCTCCCGGTTATTACCATAATG
GCTTTATGGCAACTCCTGAACTTGGGCACAGGATGTACGGTATAAAGTAA
AATCCTCAAAACTTGTTATCTAAACTGGGTTTAGAATAATTGAAATAAGA
TTAAAGGTTTTTGTTCAATCAAAAGATATTCAATTCCGAAGATGATTGAA
TAGCTTTTGGAGATAAAATATTAAGTATACAAGTCATAAAACTTTTCATA
AATCATGAGGATTTCACTTTGTATAAAAATTTGTTGGCTTTTTTGGGACA
CACTGTGTTATAAAAACATTGTTGTTTTTATGAGACCCCCTAAAAGCAAT
ATCGAAAGTATTCTACTGTCATGTAATTCTGCACCCTTCATTTTACCTCT
TTTGGTGAAAACCCTATGAAATTGAAAGCCCGATGTCTGTAATGAGGGAA
GTGAGCAATACTTTAAAAAGTTATGTCTTTAGAGGGATTTGCTTACGCAG
CATTTTTAAACGCCACTCTAGCAGAAATTCTTTATTTTACTTTGTCAGCT
TAAGATGCGCGCCTCATTTCTAAACCATAAAAAGTGGGTTAATATCATCC
TTTAAAACTTTTGCAAAAAATTCGAAAATTAAGATGAAAAACCAAGTTAA
ATCAACTTTACTTTTGTTATGTTGAGGTTGAAATGGCGAAAGAAGATTTC
TCCCTCAGACGAGGTAAACTTCAGATGGGGATGGATACCGAAGGAAAAGC
TCCTAAAATAAAGGTACCTTTATGGTTTTATGAATCTTTATTCTCCCTGT
GGTGAAGATGTAAGACCTTCTTAACTCTTGGATTGGGGATAAATATAATT
TTCTAGAATAGCCCATTTTTGATTAAAAAGGTATACAGCAACAATGATGC
TTTTATGCATCTTGGTAAGAGTTATTTAGAAGATTACTGTATAATTAGTC
TGATTCTACTGTAATTACTTTTTATTTCAAATTCTTCCGAAGTCACCATT
GACGACTGAAATGGCATCTTCAATTAAACTGACCACTTTGGATACGCTGG
AAGAAGTGTTATCAGCTATCAGTATCGTTAGCTTGGGCATCGGTTTGATT
GCTTTTAGACTTGTCAGGTATTCTACTTGGTTGGACCACAGATATTATAT
TCATGATATGCACCATTGTCTTCCACGGACCCAACAGCTGATTGGTTGAA
AGTGACGTAATTGCTGATTTGATGTCAATTGCAACCAATCAGCTATTGGT
CCGTGATGTAATATCAGAAGACATTGCAATGGTGCATATCATGAATAGAA
AACACTTTACGGAGATACTCCGTCCCTAGCTGAGGCAAAATAATCCGCCA
TTTCGAACTAAGTGACGTCACAATTTAGCTTGCGTGATCCTTGTAATTTT
GAAGTAATTGCAATGTCAAAAAACTTCCACAGTGAAAACCAAGGTTTCTA
CTGTGGTCTACGGTGACCTATTTTCAGCAAGGATGGCGGATTATTTTGCT
TCACCTACCTTTGCTTGGGAAATACAGAGTAGCTCTATCTAGTGTTTTAT
ATTAGATATCTGTGGGTAGGACTCCTATCTCATCGGCTGGCTCAAATTTC
ACCGGTTGGAACAATACCCTAAAATTTGCAAACGAGAATATTACCCTACC
AATTTTATCCCCGTGGAAAAATTTGCACTGTGCGACCATCCCCAGTGTTT
TTCTGAGCTGAAAATAAAATGTTTTTATCCCCATCAAGAATAGAATTAAA
TTTCATTCCAATTGGAAGGTGCCCTATGGTTTTATCCCCATTGGAAATTG
AAACAAGACGACTTTTGCAAAAGGTATGCTAAAGTGCCGGCTGAAAAGCT
GATACAAAAAATATGAGACAAATTATAGAAAAAGTTTTAGGACGAGTCAT
GAAAAGGATCTGGACAAGCATTACTTAGCGAAATTTGATTTCTATCAAGA
GTTATTGATTCGATTCTTCATCAAATAGATGCTTATAAATGTTTACTTTG
TAAAAACTAATTACCGAAAAGTATATCCCCGTCTATCAAGAGTTAATTAT
TTTGATTCCTATAAAGTAGATGCTTATAAGGAAAATAAATATGCTTATAT
CATATTGTGCACCGTCCCTTGTTTACTTTGTAAGAACTAATTACCAAAAT
ATACCCCCGTCTATCAAGAGTTATAGATAATTAAAAAAAAACGCTCGAAA
AGTTTGCGTGGTTATACAAAACTAGTTAACAAAAATTAAATTTAGTGAGT
TCGTTCGAGTACTTTTGCCTTCTAAAATTTTGACCTACTTTACCAGCGCT
CTGCAGAAAGCCTATCGTAATAATTCGCTAATGCGAAATTAAAAATACAC
CCAAAAACTATCACCACTGATCTTTTTGAGCATCAAAATATTTTCTATCC
CCCTTTTGTGGTCTCTAAAACACTCTATTTTTATAGAAGTTTGCACAAAA
ATGCTCTAACAATGGTGAAAATAAGGACTGACTAAGAACATTTTTAGGCT
TACTAAAAAAGTTAAGAATATCTGTAGGCTTCAGAAATGTTCCTATTAAA
GAACGTGTAGGATTACCTTTCTGATTCTGATTTCATGTTTAGATTAGTCA
GATATTGATTTTAGGGTGACAGGACAATTGCCCCATGACAATTGCCCCCC
CACACTTTCATACAGCATTATTAAATGCAGTTTTAAAGAATAACAAGAGA
AATAGTCATAAAAAAGACTAACTGTAACGATCAATAATTATCTCGAAGGT
AAATTGTTAGGGGAGGGGTAATTGTCCCAGGGGGTAAGGGAGTAATTGTT
CTGGGGGTAATTGTCTGGGCAACTGTCACGGGGGGGGGGGGGGGGGAAAA
GGGCCCGGGGGGGGGGGGGGAATTTTCCAGAATTTTTTTTTTGGGGGGGG
GGGGGGCGCGGGCGGGGGGGGGGGGGGGGGAAAAGGGCCCGGGGGGGGGG
GGGGAATTTTCCAGAATTTTTTTTTTGGGGGGGGGGGGGGCGCGGGCGGG
GGGGGGGGGGGGGGAAAAGGGCCCGGGGGGGGGGGGGGAATTTTCCAGAA
TTTTTTTTTTGGGGGGGGGGGGGGCGCGGGCGGGGGGGGGGGGGGGGCAA
TTGTCCTGAATCTGATTTTAGGTGCAAAATTCGTAAAGTATCTGCTAAGA
TATTCTTGAAAGATACAAGAAATATTTAGAAAAAATTGATTACTCTTTCC
TTTGTAGAAACCAAACAATGAGATTGTTTAATCATCAAAATCTGATGCTA
TCTTTTCTGCTCAATGGATTAATTTACAAAATTCCACTTTGGTTTATCAG
TAATCTGCCGTCAAAATCACAGGTAATAAAAAACCAGTGCTGTATTAAAT
ATGCAGTGGAATCTCTCTATCTCGAGCTCCAAAGGGACCAAAAATTTTGT
TCGAAATAGAGAAAGTTCGAGATAAAGAAATTTGACTTTAAAAATCATAT
TTTAGGTCTATTAGACGGTTGGGGTGTAAAAAAGACATTGAAACGTGTAT
TAGCTTGTATTTTATCTTTACACTGAAGTTACTAGGATCACTCCAATGCG
GTAAAGAACGAAATGTTTTCTACGACGGAAAAGTTTTTACCAGTAGTGGC
AAATTTAAACTAGAAAAAATACATGGGTTGCAAAATTATATCAGTGCAGT
CAAAACATTTTATGCCCATGTTACTTGCTTTAAAACATACAGTTAATAAC
TTTATCAGTGTCAATAAATTTGAGCCAATCAGAAATAAATGTCATGTAAA
AACCACGTAAAAATTTCGAGTAAAAGCGTGATTTATCTTCAAATTTTAAT
TTTTGTAACCTATGTATTGATAAGAATTCGCCACTACAGGCAAAACCCGA
GGTCTTTCCGTCTTATAAAACATTACGTCATGAATATAATAAACAAAACC
TTTTCTTGTTTTTTTTAATAAAGGGCGGATGTATGGCGGTATCAGTTTTG
TCGTATTTTTTCACCCTCTGTTCATTCTCTTGGATGATGGTTGAAGGAAT
CAACATTGTTATCATTATGGTTTTTGTATTCCAATGGAATGGAAATTACC
ACAAACAGTACACTGCATGAAAAGTTGTCTTCTCTAACGCAAGATATATG
ACGAAAAGTTAACTTTTCTCTCAATTTTCTTGTTTTGAAATCATTGAATT
TTCTTCTGTGCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005321XLOC_005321Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009533-exon-sc0000095-1575043694:577883..578025TCONS_00009533-exon-sc0000095-1575043694:577883..578025Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1575043694:575970..576076TCONS_00009533-exon-sc0000095-1575043694:575970..576076Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1575043694:574306..574530TCONS_00009533-exon-sc0000095-1575043694:574306..574530Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1575043694:573356..573453TCONS_00009533-exon-sc0000095-1575043694:573356..573453Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1575043694:566234..566321TCONS_00009533-exon-sc0000095-1575043694:566234..566321Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1575043694:564863..564949TCONS_00009533-exon-sc0000095-1575043694:564863..564949Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1575043694:564509..564633TCONS_00009533-exon-sc0000095-1575043694:564509..564633Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1575043694:562304..562418TCONS_00009533-exon-sc0000095-1575043694:562304..562418Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1575043694:561463..561702TCONS_00009533-exon-sc0000095-1575043694:561463..561702Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1510915933:577883..578025TCONS_00009533-exon-sc0000095-1510915933:577883..578025Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1510915933:575970..576076TCONS_00009533-exon-sc0000095-1510915933:575970..576076Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1510915933:574306..574530TCONS_00009533-exon-sc0000095-1510915933:574306..574530Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1510915933:573356..573453TCONS_00009533-exon-sc0000095-1510915933:573356..573453Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1510915933:566234..566321TCONS_00009533-exon-sc0000095-1510915933:566234..566321Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1510915933:564863..564949TCONS_00009533-exon-sc0000095-1510915933:564863..564949Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1510915933:564509..564633TCONS_00009533-exon-sc0000095-1510915933:564509..564633Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1510915933:562304..562418TCONS_00009533-exon-sc0000095-1510915933:562304..562418Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1510915933:561463..561702TCONS_00009533-exon-sc0000095-1510915933:561463..561702Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1491911889:577883..578025TCONS_00009533-exon-sc0000095-1491911889:577883..578025Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1491911889:575970..576076TCONS_00009533-exon-sc0000095-1491911889:575970..576076Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1491911889:574306..574530TCONS_00009533-exon-sc0000095-1491911889:574306..574530Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1491911889:573356..573453TCONS_00009533-exon-sc0000095-1491911889:573356..573453Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1491911889:566234..566321TCONS_00009533-exon-sc0000095-1491911889:566234..566321Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1491911889:564863..564949TCONS_00009533-exon-sc0000095-1491911889:564863..564949Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1491911889:564509..564633TCONS_00009533-exon-sc0000095-1491911889:564509..564633Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1491911889:562304..562418TCONS_00009533-exon-sc0000095-1491911889:562304..562418Clytia hemisphaericaexon
TCONS_00009533-exon-sc0000095-1491911889:561463..561702TCONS_00009533-exon-sc0000095-1491911889:561463..561702Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:561463..578025 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.104449	0.256298	0.227616	0.18915	1.8709	0.830424	0.859181	0.798293	0.264051	0.346917	0.267183	0.392141	0.138931	0.144281	0.205446	0.148512	0.313637	0.332085	0.185052	0.116186	0.47528	0.612857	0.667276	0.885574	1.10781	1.14186	0	0.101899	0.0772866	0.157486
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009533 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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