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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009532 ID=TCONS_00009532|Name=TCONS_00009532|organism=Clytia hemisphaerica|type=transcript|length=726bp
AAGCACAAAAGCGTTTTTGGTGTTGGTTTCATTGCTTGGAATCACATTTA
TCCTTGGTCCATTTGTAACGTACAGCACGGTGATTGCATACGCTTTCGTT
ATTATGAACGGCCTAACGGGGGTATATTTTTTATTGGGACACGTCATTTT
GGATGCTAACATTATTGATCAAATcaagaaaagattgaaagaattTGGAT
CAAGCTCAAACTGAACAACCATCGCCATATTAATTTTCATCATTGGCAAG
CTGAGATTGGACTGGCAGAAAAATTCAAAGCAACGCGTGTGCCATGTACG
TAACATAGTTGAGACTATGCAAGTATCCTGGCTAACAGAAAACGTCTAAA
CAACGTCCAAATGACATCCCTAACATTGGTATAAAGTGAAATGAAGACTT
AAATAACATTGTGTGCTGGGGCGTGTTAGCTGGACTAATTAAAAACATTG
GGCTTGTTTATAATGGTATGAACAATAATCAACTTTGATATTcacattgg
gctgttccattaaatttccatacaggggggtagacgaaccttttcaaggc
aaaaaaagaTTAGTAGAATTGTCCCCTGGAAATtggcaaaatttacaaaa
gaacccttggaaaaattatttttatacctTTAAAAGTGATAGTGAACGAA
CTAAAATCGGTCTTTTACCcgctggaaattttagaatgacTTTTTACCTC
CTGGATAAATTAAAAACTACTCCTtt Run BLAST on NCBI transcript from alignment at sc0000095:553688..554856- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009532 ID=TCONS_00009532|Name=TCONS_00009532|organism=Clytia hemisphaerica|type=transcript|length=1169bp|location=Sequence derived from alignment at sc0000095:553688..554856- (Clytia hemisphaerica)
AAGCACAAAAGCGTTTTTGGTGTTGGTTTCATTGCTTGGAATCACATTTA
TCCTTGGTCCATTTGTAACGTACAGCACGGTGATTGCATACGCTTTCGTT
ATTATGAACGGCCTAACGGTGAGTTGTATTTAAGTTTATTCACGCAAAAC
GTGGTCTCTTTCTTGCTAGCATGTTGAAACCAATAATAGTNTTTATTCAC
GCAAAACGTGCTCTCTTTCTTGCTAGCATGTTGAAACCAATAATAGTAAC
GTTATCAAAAAGACTAACTAGAACAAAAGTCGAGGGGCCGTACAGGAAAA
GCCCCCCCCCCTACTTTTGAACCGCCCCTAAAAGCTTAGTATAAATAGGG
TTAACTCGAACAAATTTCATGAACTCCAGTTAACAATGCCTTTAAAACCT
TACTCAAAAACTCGAAATTTACACTTAAGTCAAACAAATTTCTGTTCTCC
GTGCGTGTTCGAGTTATGGAGACTAAGCTGTATTTCTATTCAATACCCTT
GTGCGACAGGTATTGAGTGTTAATTACTTTAAAATCTTAAACTTTGACTT
CACTTTTTAAGGGGGTATATTTTTTATTGGGACACGTCATTTTGGATGCT
AACATTATTGATCAAATCAAGAAAAGATTGAAAGAATTTGGATCAAGCTC
AAACTGAACAACCATCGCCATATTAATTTTCATCATTGGCAAGCTGAGAT
TGGACTGGCAGAAAAATTCAAAGCAACGCGTGTGCCATGTACGTAACATA
GTTGAGACTATGCAAGTATCCTGGCTAACAGAAAACGTCTAAACAACGTC
CAAATGACATCCCTAACATTGGTATAAAGTGAAATGAAGACTTAAATAAC
ATTGTGTGCTGGGGCGTGTTAGCTGGACTAATTAAAAACATTGGGCTTGT
TTATAATGGTATGAACAATAATCAACTTTGATATTCACATTGGGCTGTTC
CATTAAATTTCCATACAGGGGGGTAGACGAACCTTTTCAAGGCAAAAAAA
GATTAGTAGAATTGTCCCCTGGAAATTGGCAAAATTTACAAAAGAACCCT
TGGAAAAATTATTTTTATACCTTTAAAAGTGATAGTGAACGAACTAAAAT
CGGTCTTTTACCCGCTGGAAATTTTAGAATGACTTTTTACCTCCTGGATA
AATTAAAAACTACTCCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009532-exon-sc0000095-1575043694:554739..554856 | TCONS_00009532-exon-sc0000095-1575043694:554739..554856 | Clytia hemisphaerica | exon |
| TCONS_00009532-exon-sc0000095-1575043694:553688..554295 | TCONS_00009532-exon-sc0000095-1575043694:553688..554295 | Clytia hemisphaerica | exon |
| TCONS_00009532-exon-sc0000095-1510915933:554739..554856 | TCONS_00009532-exon-sc0000095-1510915933:554739..554856 | Clytia hemisphaerica | exon |
| TCONS_00009532-exon-sc0000095-1510915933:553688..554295 | TCONS_00009532-exon-sc0000095-1510915933:553688..554295 | Clytia hemisphaerica | exon |
| TCONS_00009532-exon-sc0000095-1491911889:554739..554856 | TCONS_00009532-exon-sc0000095-1491911889:554739..554856 | Clytia hemisphaerica | exon |
| TCONS_00009532-exon-sc0000095-1491911889:553688..554295 | TCONS_00009532-exon-sc0000095-1491911889:553688..554295 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095 | supercontig | sc0000095:553688..554856 - |
Blast
The following BLAST results are available for this feature:
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