TCONS_00009481 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009481
Unique NameTCONS_00009481
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1927

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009481 ID=TCONS_00009481|Name=TCONS_00009481|organism=Clytia hemisphaerica|type=transcript|length=1927bp
TAAAGCTAAAGcagagttaaaaaatggaaaacaaaaaactattATCACCA
ACACGGCAGAGTTTGTTTCGAGCATGCAAGTCTCCTGCTAAACAAGAAGA
TATCAGAATTCCAGAGCCAGAGAAGAAGATCAAACTTGGAGCTGATTTGC
TCAATGCTTTTCCAGAGATCgctgaaaattttgatattatcAAGAAGGTT
GGAGAGGGTACATTTAGCAAAGTGTTTCTTGCCAAAATGAAATGTGATTC
ATCCAAAAAGGTTGCTTTTAAACATCTAGTTCCAACAAGCTCGCCTGGTC
GCATAGAAAATGAATTAAAATGCTTACAAGAGCTAGGtaATAAGAATAAT
GTTCTTGGCATCAAGACAACACTGCGAAGGAACGATCACATTGTATTCGT
CCTGCCTTACTTTCCATACAGAAAATTTAATGATGTGATGGACCGTATGA
GTGCAAATGATATTCAGAATTACATGAGAAACTTATTGATAGCTTTGAAG
CATGTTCactcttataaaattattcacCGGGATATCAAACCAAGTAATTT
CCTTTATTGCCAAGAAACAGACAGCTATGCATTGATCGACTTTGGTCTAG
CCATGCCTGTCCCTGGAACAAAAGGATGTTTCCTTTCAGATTACACTGCA
ACTGTTGTGGGAATGTCAGACAATAAGAAGCCTTCTTCATCAAAAGCTTA
TGCTAAACCATGCAAGCACCCGAGACTTGATACATGTAACATCTGTAGAA
ATAGACCACGTCAAAAAGCACCGAGGGCAGGCACTCCAGGTTTTCGTTCA
CCAGAGGTATTGATGAGGTATCCTAACCAAACGACAGCTGTAGATATGTG
GGCTGCTGGTGTTGTTTTCTTATGTTTGTTATCAAGACGTTATCCATTCT
TCAAAGCTAAAGACGATATGGAAGCCCTCTCTCAAATCATTGTCCTCTTT
GGCAgtaagaaaattaagaaaatggcTGACTCGATTGGAAAAACTTTCGA
TTGTTCACCTCCAGTAGAGAATCCGGACACTTTGAAAGTTATCTGTGAAA
AATTAGCTCGCAGACAATGCTCTTTACATAGAGACTACAAAGAAGGATCT
GCAAAACGAAAACTTAGTGATCCAAGTGCAGCAGCCACTAATAGTCCAAA
CAAGAAACAAGTAAGCGAGACAATAATTAAAGACTCTAATCAAAGTAATC
GAATCTTAGCCGACATAACATTGGGTAAGAACCGACTGACTCAATCAGAA
TCGACCTCAAAATGTACGAGTTCTATTTCAAAGTCTAAAAAATCTAAACA
ACCAGTTTGTGCTTGTATACCTGAAAGTGCGTATGATTTGTTGGGGAAAC
TACTTGAACTGAACCCTGATGATCGAATCAGTGCATCTGATGGTTTAAAA
CATCCGTTTATCACACATTATTGAGCGTGGTTAGTTATCATTATAAAGAA
TCATTGCTAATTGGTGCTTGTGCTTTTTACCGATTTTATGtttagaaaag
tttttgaagaCCTGGATTGACTGGATTCGTTCGTTcggtttttttgtttt
ctacatttttttaaCTCCCTCCAAAGAATCACCCATTTGACTGTCATTAA
AATTTTTATGTatggttctttttattattatggGTTGTTTTTCAACAATA
AAGAGTGAATTGCATTCAAACCGTGCAGTCATATTTTAtggtttaagaaa
aattttgagagcatTGCCGTTGGTAGACTCAAATATTTGAATAACAAATA
ATAGacgtttttgatgttttaaagTGTGCCCGGAAAAAAAGTGGTGCACC
CATACAAAGGAAAATTTGTATGATTTTTGCAAGACACTACATTAAAAAAC
ATTTATTAAAAATAATGCAGttttagttttgtttgtttttagcatacttt
tgtatatattttgaaTAAAGATAAAAA
Run BLAST on NCBI

transcript from alignment at sc0000095:414430..423220+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009481 ID=TCONS_00009481|Name=TCONS_00009481|organism=Clytia hemisphaerica|type=transcript|length=8791bp|location=Sequence derived from alignment at sc0000095:414430..423220+ (Clytia hemisphaerica)
TAAAGCTAAAGcagagttaaaaaatggaaaacaaaaaactattATCACCA
ACACGGCAGAGTTTGTTTCGAGCATGCAAGTCTCCTGCTAAACAAGAAGA
TATCAGAATTCCAGAGCCAGGTAAAACGTATTTTATGTTATACTCAAGGC
TGAATTTCACGACTAGTCTTGTCATCCAGATCAGACTCAAtcaaactgaa
aataattaattcaTTGACttaaacacatgattttcaaacacattgtcttt
tttattcaaaattgtaGAGAAGAAGATCAAACTTGGAGCTGATTTGCTCA
ATGCTTTTCCAGAGATCgctgaaaattttgatattatcAAGAAGGTTGGA
GAGGgtaattattaaatatttcaagtGAAACAATTGACCATCAAGGACTT
GCAGCTAGCAGGTTCACTGGTCCTCTGATAAAAAATTGGGCTTTTTTAAC
TTTCGAATTTTGCTCCAAAAACACTCCAACACTAGTTTTCTCTGGAGTAT
AGCCAAATGATCAGTGAATGGCTAACACAGGTCATTTAAAGTATAATCTC
AAAGTTTATATAAGATTTAATTGTTTAAAAAAGGTATTTATTTTTAGCAC
TGCTTAGCAAGACTAAtccaggaaaatattttttgcattattagttttca
ttttcactttctaagctttcaaaaatttcatatatacccgtgacctgtga
cctgtgttttacactaaccgtacAATCCCTATCATAAGTTattttttact
gtcagactaaTACTAGATTATCATTCAATTCATACAAAATAATAAAGGAA
ATAATCTTAATAAATCTTATCAACTTAAGCTTTTGATTGATTTATTAATT
AATAATCATTAACTAATGAAATAATACTTTagattaatttcattttctag
GTACATTTAGCAAAGTGTTTCTTGCCAAAATGAAATGTGATTCATCCAAA
AAGGTTGCTTTTAAACATCTAGTTCCAACAAGCTCGCCTGGTCGCATAGA
AAATGAATTAAAATGCTTACAAGAGCTAGGGTAAGTTTTATCATTCTATC
CTTTTTTCTGTATAACAAAATTGGTAATATTGTGCTATCTCAGCCTACTA
TCACAGCCGTCNGTATTTCAAGTGAAACAATTGACCATCAAGGACTTGCA
GCTAGCAGGTTCACTGGTCCTCTGATAAAAAATTGGGCTTTTTTAACTTT
CAAATTTTACTCCAAAAACACTCCAACACTAGTTTTCTCTGGAGTATAGC
CAAATGATCAGTGAATGGCTAACACAGGTCATTTAAAGTATAATCTCAAA
GTTTATATAAGATTTAATTGTTTAAAAAAGGTATTTATTTTTAGCACTGC
TTAGCAAGACTAAtccaggaaaatattttttgcattattatttttcattt
tcactttctaAGCTTTCAAAAACTTCATATatacccgtgacctgtgacct
gtgttttacactaaccgtacAATCCCTATCATAAGTTattttttactgtc
agactaaTACTAGATTATCATTCAATTCATACAAAATAATAAAGGAAATA
ATCTTAATAAATCTTATCAATTTATGCTTTTGATTGATTTATTAATTAAT
AATCATTAACTAATGAAATAATACTTTCgattaatttcattttctagGTA
CATTTAGCAAAGTGTTTCTTGCCAAAATGAAATGTGATTCATCCAAAAAG
GTTGCTTTTAAACATCTAGTTCCAACAAGCTCGCCTGGTCGCATAGAAAA
TGAATTAAAATGCTTACAAGAGCTAGGGTAAGTTTTATCATTCTATCCTT
TTTTCTGTATAACAAAATTGGTAATATTGTGCTATCTCAGCCTACTATCA
CAGCCGTcgtagatttataaagccgGGTTAGATGTCATgctttaagcttt
tccaagcaacaaaaattgaaaatcgcaaaaaatattgttactATTGTTTT
TGAACACCTGCgaggcttctgattggtcaagggttgaaattcttttgtaa
tgtcacttgacctaggtaggatttacTACATAGATaaggcacacttttca
gccaaaacacAATACTCAGCTGTTCTGATAACATAAAGTTTTAGAAAGTG
TAAAACAATTTCTGATTTCAGTTTGAATATTTTTCTCTCTAGAATTTTGA
TTGGCAACTTGAAAATTAACATATTAAtaaattattaattattttCCAGT
TGTctcatctttttctttttatagtaATAAGAATAATGTTCTTGGCATCA
AGACAACACTGCGAAGGAACGATCACATTGTATTCGTCCTGCCTTACTTT
CCATACAGAAAATTTAATGTGAGCTATTAAGATTATTTGCATgttcctaa
aaaaaattaaatctgtGAAATGCATGATAataaagtctgttccaaaaatt
caacataagaagacaaaataaccccagcgagatcgctcaatgtttcaatt
tcagtctaaaaaggctgattttttCCAATTCTGGGTAGCAAAGTGCATGA
AAGcaggggttattttgtctttttatgttgaatattagtacgaGACACCT
TTTAGCAACCATTTTGCCCTTTTCCTGCCCATTCATGGCCTTagaatggg
caaaaaatgccatttttactcatttttcccTTTAGTGAGAATCAAAGACC
TCCCTGGGAAATGCTGGATTTTTGATCTAGGAGGTTAAAAATGGAGCAAA
ATGTTTTACAATAGATTtttactttcacaaaaaaatactatactttgaat
tttttgacttcacatttgacgatctaccctattGTTATTCACTTAACAAA
AAAGGAAGCAAAAGTATTGCAAAcgataattttcatttttaattgaattG
CTTATTGCTTATCAGCTCAGTTGATAGAGCATTCACCTTACACTCCAAGG
GTTGTGAGTTTAATCCCCGGTCATCGCCAATTCAgcgaatgagtagctta
gattgggtaatttGTTCTAAGCAGTAAGTTACTGGgggctgagagtaggt
gtggcgctccacctcagtaTTCGATTTCCCTGGtctagaaaaggggatag
actccgtCATTCCTGGCTCCGCTGACACCCACCAGATGAATAAACTCACT
TTACTTTCCTTATAATTGCAGGATGTGATGGACCGTATGAGTGCAAATGA
TATTCAGAATTACATGAGAAACTTATTGATAGCTTTGAAGCATGTTCact
cttataaaattattcacCGGGATATCAAACCAAGTAATTTCCTTTATTGC
CAAGAAACAGACAGGTACAATTATCGATATCATTTGAATTCATAAAATAT
TtaaggattaattaatcctttttgAACCTCTATACTTTGCTTTATTCTGG
AAAATCTGTTTATATAGCTATATTCAGCTTTTGTACCTAATTCCACCcct
tgaattttttatttttttctctcaacattttccacccagaacCCAGGCGG
AATGCTTACTATGCCAGGGAATTTTAACTTGTGACGACTCCATTCGCCAT
TTCTGCGATGGAGCCACTGAAACCTAGTTTTGGATTCACAAAGTTGTTGA
AAAGTTTACTTTCAAATATAGTATCTAACTGTTTGTGTTTTTCAGCTATG
CATTGATCGACTTTGGTCTAGCCATGCCTGTCCCTGGAACAAAAGGATGT
TTCCTTTCAGGTGAATAGAAGTTTCTCATTGGTTCATTTACTGTACAATG
CTCACACTTTTCCATCTCAAATGTGGATTTTCTTTActtactttcaaatt
ttgaaggattCGAATCATTCACTAATTCTACCTAAAAATTACTTACATAA
TTAGTTATTTTCTGGGAAAGCCAAATCCGGGCGAATTCATTACAGTTCTA
CTTTGTCTTTCCTTAAAACATAGTTAATATAAGAAGTagaagatttttca
atattATTAATGGTTTTCTTTCAGATTACACTGCAACTGTTGTGGGAATG
TCAGACAATAAGAAGCCTTCTTCATCAAAAGCTTATGCTAAACCATGCAA
GCACCCGAGACTTGATACATGTAACATCTGTAGAAATAGGTGACTATACT
TTATATTGTAcacaaatttcatgtttaaCCTTTGGAAACTACTTGTTACA
CTCATTGCAATATATCGAGTTAATTTTCTTCCCAGTTTTTGTAGCGTCAT
TTCTCTACTTTGCATTATGTAACATAAACTTTCTTACGGAAAAAcggtgg
taaaaaagtgcttgaaaaataCCTTGCAATGTGTCCGCAGGGTGGTCTGC
AAATTTGTTAAACTGAATCATAATAAAAACAACGACAAAGAAAAGCTTTC
AGTCGGGGTACCAAAATaccttcaaatttcaaaaaaagtttgttttcctT
GATGTTTTATAGACCACGTCAAAAAGCACCGAGGGCAGGCACTCCAGGTT
TTCGTTCACCAGAGGTATTGATGAGGTATCCTAACCAAACGACAGGTATT
TGAATTATCTTATCCTAAACCCTTTTGGAAAGAGCTGAGTAGAAGCTGTA
GCAGGGTTGTTTAACATGGTTTTAAGTGAATAAGTAAGTtttcgaccgca
gtcgagggtcacccaaaggctcccttttctctagctgtctacctTTCTTT
GGATATCCCTTGATCAGTCACTTTAGCTGATAACCATCAATCAGAAAAGC
ATCAAGtatcattttgggaatcttaAGTATGACCCAACCCACAACTTTGT
GCACGGCAgttggatgctctaccttcatgctacggctTTATGGTAGTTAA
ATTTCTATACAGGCATTTTAAGATCGACTGTAAATTTTGTGTAAATTATT
ATCGAACTGGCAGTAGAACTTAAACTTTGATCTGAAATTgacctttgaaa
ttttttacccCATCTTTGTTTCTACTATCTTGCCTGTAACTTTAGACATT
TGcccataaatttttttgccaggCCTTAGCAGCGAACTTCTATACTAAAA
TGACTTCAAACAcattaaacttttgaaaagaattattttaatGATGTCCT
AGAAAAGATTTCATGGATACTAAGGTTTGACCCTTACTNGTTCAGATTAC
ACTGCAACTGTTGTGGGAATGTCAGACAATAAGAAGCCTTCTTCATCAAA
AGCTTATGCTAAGCCATGCAAGCACCCGAGACTTGATACATGTAACATCT
GTAGAAATAGGTGACTATACTTTATACTGTAcacaaatttcatgttttac
cTTTGAAAACTACTTGTTACACTCATTGCAATATATCGAGTTAATTTTCT
TCCCAGTTTTTGTAGCGTCATTTCTCTACTTTGCATTATGTAACATAAAC
TTACTTACGGAATAAcggtggtaaaaaagtgcttgaaaaataCCTTGCAA
TGTGTCCGCAGGGTGGTCTGCAAATTTGTTAAACTGAATCATAATAAAAA
CAACGACAAAGAAAAGCTTTCAGTCGGGGTACCAAAATaccttcaaattt
caaaaaatgtttgttttccTTGATGTTTTATAGACCACGTCAAAAAGCAC
CGAGGGCAGGCACTCCAGGTTTTCGTTCACCAGAGGTATTGATGAGGTAT
CCTAACCAAACGACAGGTATTTGAATTATCTTATCCTAAACCCTTTTGGA
AAGAGCTGAGTAGAAGCTGTAGCAGGGTTGTTTAACATGGTTTTAAGTGA
ATAAGTAAGTtttcgaccgcagtcgagggtcacccaaaggctcccttttc
tctagctgtctacctTTCTTTGGATATCCCTTGATCAGTCACTTTAGCTG
ATAACCATCAATCAGAAAAGCATCAAGtatcattttgggaatcttaAGTA
TGACCCAACCCACAACTTTGTGCACGGCAgttggatgctctaccttcatg
ctacggctTTATGGTAGTTAAATTTCTATACAGGCATTTAAAGATCGACT
GTAAATTTTGTGTAAATTATTATCGAACTGGCAGTAGAACTTAAACTTTG
ATCTGAAATTgacctttgaaattttttacccCATCTTTGTTTCTACTATC
TTGCCTGTAACTTTAGACATTTGcccataaatttttttgccaggCCTTAG
CAGCGAACTTCTATACTAAAATGACTTCAAACAcattaaacttttgaaaa
gaattattttaatGATGTCCTAGAAAAGATTTCATGGATACTAAGGTTTG
ACCCTTACTCTCGTggaatttttagtttttgatatGTTTCGTCACTCTGT
TTGTAGTGTTTTATGTTATCATCTTTTATTATTTCAGCTGTAGATATGTG
GGCTGCTGGTGTTGTTTTCTTATGTTTGTTATCAAGACGTTATCCATTCT
TCAAAGCTAAAGACGATATGGAAGCCCTCTCTCAAATCATTGTCCTCTTT
GGCAgtaagaaaattaagaaaatggcTGACTCGATTGGTAANAGTTTGTT
TTCCTTGATATTTTATAGACCACGTCAAAAAGCACCGAGGGCAGGCACTC
CAGGTTTTCGTTCACCAGAGGTATTGATGAGGTATCCTAACCAAACGACA
GGTATTTGATGAATTATATTATCCTAAACCCTTTTGGAAAGAGCTGAGTA
GAAGCTGTAGCAGGGTTGTTTAACATGGTTTTAAGTGAATAAGTAAGTTT
TCGACCGCAGTCAAGGGTCACCcaaaggctcccttttctctagctgtcta
cctTTCTTTGGATATCCCTTGATCAGTCACTTTAGCTGATAACCATCAAT
CAGAAAAGCATCAAGtatcattttgggaatcttaAGTATGACCCAACCCA
CAACTTTGTGCACGGCAgttggatgctctaccttcatgctacggctTTAT
GGTAGTTAAATTTCTATACAGGCATTTTAAGATCGACTGTAAATTTTGTG
TAAATTATTATCGAACTGGCAGTAGAACTCAAACTTTGATCTGAAATTga
cctttgaaattttttacccCATCTTTGTTTCTACTATCTTGCCTGTAACT
TTAGACATTTgcccataattttttttgccaggCCTTAGCAGCGAACTTCT
ATACTAAAATGACTTCAAACAcattaaacttttgaaaagaattattttaa
tGATGTCCTAGAAAAGATTTCATGGATACTAAGGTTTGACCCTTACTCTC
GTggaatttttagtttttgatatGTTTCGTCACTCTGTTTGTAGTGTTTT
ATGTTATCATCTTTGATTATTTCAGCTGTAGATATGTGGGCTGCTGGTGT
TGTTTTCTTATGTTTGTTATCAAGACGTTATCCATTCTTCAAAGCTAAAG
ACGATATGGAAGCCCTCTCTCAAATAATTGTCCTCTTTGGCAgtaagaaa
attaagaaaatggcTGACTCGATTGGTAAGGTCTCCTTCTGTTTCAGGAC
ATCAATCTGCCTGACTCAGAGAAATTAAGCCCTTGCATAGATAAAAGTCT
ACTTctgactaaattttgaaaaaatgcaatttaGAACGGAAAACCGACAT
CTATGACCTATCAATAATTTCCCAATTATCGTTCACTTTCCAAAGAGTAG
CGCGAAATCTGATTATCTGTTTTTGATCATCTTCACCAAAGAGAAATCAA
TATGGCACGATACTCTCGGGCCACTTAAACAATGTCTTCCAGTATATCTC
ATTGAGTGGTTTTCACACTAGCCTTTACTCAACCTTACGTTAAGCATTTA
CAGCTAAGAtacttcattttttgaattcgCATGCTATGAATAATTCTATA
GATAATAAATTTGTGCTACTTAGAAACTTTTATAGTTTATGGTTTGTGAC
TTCACTTGATCCAAATCCATGTCAGAGAATGGTCAATAAATTTGGGGAAG
CCTTATAAACCATCGTCaatgaaacttttgaatttccctttttctctACA
GGAAAAACTTTCGATTGTTCACCTCCAGTAGAGAATCCGGACACTTTGAA
AGTTATCTGTGAAAAATTAGCTCGCAGACAATGCTCTTTACATAGAGACT
ACAAAGAAGGATCTGCAAAACGAAAACTTAGTGATCCAAGTGCAGCAGCC
ACTAATAGTCCAAACAAGAAACAAGTAAGCGAGACAATAATTAAAGACTC
TAATCAAAGTAATCGAATCTTAGCCGACATAACATTGGGTAAGAACCGAC
TGACTCAATCAGAATCGACCTCAAAATGTACGAGTTCTATTTCAAAGTCT
AAAAAATCTAAACAACCAGTTTGTGCTTGTATACCTGAAAGTGCGTATGA
TTTGTTGGGGAAACTACTTGAACTGAACCCTGATGATCGAATCAGTGCAT
CTGATGGTTTAAAACATCCGTTTATCACACATTATTGAGCGTGGTTAGTT
ATCATTATAAAGAATCATTGCTAATTGGTGCTTGTGCTTTTTACCGATTT
TATGtttagaaaagtttttgaagaCCTGGATTGACTGGATTCGTTCGTTc
ggtttttttgttttctacatttttttaaCTCCCTCCAAAGAATCACCCAT
TTGACTGTCATTAAAATTTTTATGTatggttctttttattattatggGTT
GTTTTTCAACAATAAAGAGTGAATTGCATTCAAACCGTGCAGTCATATTT
TAtggtttaagaaaaattttgagagcatTGCCGTTGGTAGACTCAAATAT
TTGAATAACAAATAATAGacgtttttgatgttttaaagTGTGCCCGGAAA
AAAAGTGGTGCACCCATACAAAGGAAAATTTGTATGATTTTTGCAAGACA
CTACATTAAAAAACATTTATTAAAAATAATGCAGttttagttttgtttgt
ttttagcatacttttgtatatattttgaaTAAAGATAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005302XLOC_005302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009481-exon-sc0000095-1491911889:414430..414549TCONS_00009481-exon-sc0000095-1491911889:414430..414549Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1510915933:414430..414549TCONS_00009481-exon-sc0000095-1510915933:414430..414549Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1575043694:414430..414549TCONS_00009481-exon-sc0000095-1575043694:414430..414549Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1491911889:414697..414783TCONS_00009481-exon-sc0000095-1491911889:414697..414783Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1510915933:414697..414783TCONS_00009481-exon-sc0000095-1510915933:414697..414783Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1575043694:414697..414783TCONS_00009481-exon-sc0000095-1575043694:414697..414783Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1491911889:416077..416206TCONS_00009481-exon-sc0000095-1491911889:416077..416206Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1510915933:416077..416206TCONS_00009481-exon-sc0000095-1510915933:416077..416206Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1575043694:416077..416206TCONS_00009481-exon-sc0000095-1575043694:416077..416206Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1491911889:416654..416747TCONS_00009481-exon-sc0000095-1491911889:416654..416747Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1510915933:416654..416747TCONS_00009481-exon-sc0000095-1510915933:416654..416747Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1575043694:416654..416747TCONS_00009481-exon-sc0000095-1575043694:416654..416747Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1491911889:417551..417693TCONS_00009481-exon-sc0000095-1491911889:417551..417693Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1510915933:417551..417693TCONS_00009481-exon-sc0000095-1510915933:417551..417693Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1575043694:417551..417693TCONS_00009481-exon-sc0000095-1575043694:417551..417693Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1491911889:418025..418089TCONS_00009481-exon-sc0000095-1491911889:418025..418089Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1510915933:418025..418089TCONS_00009481-exon-sc0000095-1510915933:418025..418089Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1575043694:418025..418089TCONS_00009481-exon-sc0000095-1575043694:418025..418089Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1491911889:418354..418468TCONS_00009481-exon-sc0000095-1491911889:418354..418468Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1510915933:418354..418468TCONS_00009481-exon-sc0000095-1510915933:418354..418468Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1575043694:418354..418468TCONS_00009481-exon-sc0000095-1575043694:418354..418468Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1491911889:419913..419995TCONS_00009481-exon-sc0000095-1491911889:419913..419995Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1510915933:419913..419995TCONS_00009481-exon-sc0000095-1510915933:419913..419995Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1575043694:419913..419995TCONS_00009481-exon-sc0000095-1575043694:419913..419995Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1491911889:420667..420816TCONS_00009481-exon-sc0000095-1491911889:420667..420816Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1510915933:420667..420816TCONS_00009481-exon-sc0000095-1510915933:420667..420816Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1575043694:420667..420816TCONS_00009481-exon-sc0000095-1575043694:420667..420816Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1491911889:422281..423220TCONS_00009481-exon-sc0000095-1491911889:422281..423220Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1510915933:422281..423220TCONS_00009481-exon-sc0000095-1510915933:422281..423220Clytia hemisphaericaexon
TCONS_00009481-exon-sc0000095-1575043694:422281..423220TCONS_00009481-exon-sc0000095-1575043694:422281..423220Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:414430..423220 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.06831	2.43019	31.0712	19.4195	0	2.49093e-05	0	0	0.0180322	2.65741e-08	0.644987	0.281269	0.557182	0.745539	0.169456	0	0	0.0508562	0	0	1.60263e-05	1.27398	2.36875	0.0156979	0	0	0	1.51015	2.53423	0.10591
Blast
[Close]
BLAST of TCONS_00009481 vs. Swiss-Prot (Human)
Match: CDC7 (Cell division cycle 7-related protein kinase OS=Homo sapiens GN=CDC7 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 4.431e-44
Identity = 85/204 (41.67%), Postives = 126/204 (61.76%), Query Frame = 3 
Query:   21 KMENKKLLSPTRQSLFRACKSPAKQE-DIRIPEPEKKIKLGADLLNAFPEIAENFDIIKKVGEGTFSKVFLA--KMKCDSSKKVAFKHLVPTSSPGRIENELKCLQELGNKNNVLGIKTTLRRNDHIVFVLPYFPYRKFNDVMDRMSANDIQNYMRNLLIALKHVHSYKIIHRDIKPSNFLYCQETDSYALIDFGLAMPVPGTK 623
            +M+     SP R   F+A  S  K E + ++   +K I+    L  A P+++  F I  K+GEGTFS V+LA  +++    +K+A KHL+PTS P RI  EL+CL   G ++NV+G+K   R+NDH+V  +PY  +  F D+++ +S  +++ YM NL  ALK +H + I+HRD+KPSNFLY +    YAL+DFGLA     TK
Sbjct:    8 QMDEPMAFSPQRDR-FQAEGSLKKNEQNFKLAGVKKDIE---KLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 207

HSP 2 Score: 135.961 bits (341), Expect = 9.711e-34
Identity = 87/235 (37.02%), Postives = 122/235 (51.91%), Query Frame = 3 
Query:  735 CNICRNRPRQKAPRAGTPGFRSPEVLMRYPNQTTAVDMWAAGVVFLCLLSRRYPFFKAKDDMEALSQIIVLFGSKKIKKMADSIGKTFDCSPPVENPDTLKVICEKLARRQCSL---------HRDYKEGSAKRKLSDPSAAATNSPNKKQVSETIIKDSNQSNRILADITLGKNRLTQXXXXXXXXXXXXXXXXXXQPVCACIPESAYDLLGKLLELNPDDRISASDGLKHPFI 1412
            C+IC +R +Q APRAGTPGFR+PEVL + PNQTTA+DMW+AGV+FL LLS RYPF+KA DD+ AL+QI+ + GS++  + A + GK+  CS  V   D L+ +CE+L     S          H  ++   +++     S      P +   +     DSN       +         +                        +P+ AYDLL KLL+LNP  RI+A + L HPF 
Sbjct:  360 CSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQD-LRKLCERLRGMDSSTPKLTSDIQGHASHQPAISEKTDHKASCLVQTPPGQYSGNSFKKGDSNSCEHCFDEYNTNLEGWNE------------------------VPDEAYDLLDKLLDLNPASRITAEEALLHPFF 569
The following BLAST results are available for this feature:
BLAST of TCONS_00009481 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDC74.431e-4441.67Cell division cycle 7-related protein kinase OS=Ho... [more]
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