TCONS_00009478 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009478
Unique NameTCONS_00009478
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1986

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009478 ID=TCONS_00009478|Name=TCONS_00009478|organism=Clytia hemisphaerica|type=transcript|length=1986bp
AAGAACTttacagaagaaattttacTTATCCAAAATTTTACCAATCCAAT
TTTCTTCCCTAAAGCTAAAGcagagttaaaaaatggaaaacaaaaaacta
ttATCACCAACACGGCAGAGTTTGTTTCGAGCATGCAAGTCTCCTGCTAA
ACAAGAAGATATCAGAATTCCAGAGCCAGAGAAGAAGATCAAACTTGGAG
CTGATTTGCTCAATGCTTTTCCAGAGATCgctgaaaattttgatattatc
AAGAAGGTTGGAGAGGGTACATTTAGCAAAGTGTTTCTTGCCAAAATGAA
ATGTGATTCATCCAAAAAGGTTGCTTTTAAACATCTAGTTCCAACAAGCT
CGCCTGGTCGCATAGAAAATGAATTAAAATGCTTACAAGAGCTAGGtaAT
AAGAATAATGTTCTTGGCATCAAGACAACACTGCGAAGGAACGATCACAT
TGTATTCGTCCTGCCTTACTTTCCATACAGAAAATTTAATGATGTGATGG
ACCGTATGAGTGCAAATGATATTCAGAATTACATGAGAAACTTATTGATA
GCTTTGAAGCATGTTCactcttataaaattattcacCGGGATATCAAACC
AAGTAATTTCCTTTATTGCCAAGAAACAGACAGCTATGCATTGATCGACT
TTGGTCTAGCCATGCCTGTCCCTGGAACAAAAGGATGTTTCCTTTCAGAT
TACACTGCAACTGTTGTGGGAATGTCAGACAATAAGAAGCCTTCTTCATC
AAAAGCTTATGCTAAACCATGCAAGCACCCGAGACTTGATACATGTAACA
TCTGTAGAAATAGACCACGTCAAAAAGCACCGAGGGCAGGCACTCCAGGT
TTTCGTTCACCAGAGGTATTGATGAGGTATCCTAACCAAACGACAGCTGT
AGATATGTGGGCTGCTGGTGTTGTTTTCTTATGTTTGTTATCAAGACGTT
ATCCATTCTTCAAAGCTAAAGACGATATGGAAGCCCTCTCTCAAATCATT
GTCCTCTTTGGCAgtaagaaaattaagaaaatggcTGACTCGATTGGAAA
AACTTTCGATTGTTCACCTCCAGTAGAGAATCCGGACACTTTGAAAGTTA
TCTGTGAAAAATTAGCTCGCAGACAATGCTCTTTACATAGAGACTACAAA
GAAGGATCTGCAAAACGAAAACTTAGTGATCCAAGTGCAGCAGCCACTAA
TAGTCCAAACAAGAAACAAGTAAGCGAGACAATAATTAAAGACTCTAATC
AAAGTAATCGAATCTTAGCCGACATAACATTGGGTAAGAACCGACTGACT
CAATCAGAATCGACCTCAAAATGTACGAGTTCTATTTCAAAGTCTAAAAA
ATCTAAACAACCAGTTTGTGCTTGTATACCTGAAAGTGCGTATGATTTGT
TGGGGAAACTACTTGAACTGAACCCTGATGATCGAATCAGTGCATCTGAT
GGTTTAAAACATCCGTTTATCACACATTATTGAGCGTGGTTAGTTATCAT
TATAAAGAATCATTGCTAATTGGTGCTTGTGCTTTTTACCGATTTTATGt
ttagaaaagtttttgaagaCCTGGATTGACTGGATTCGTTCGTTcggttt
ttttgttttctacatttttttaaCTCCCTCCAAAGAATCACCCATTTGAC
TGTCATTAAAATTTTTATGTatggttctttttattattatggGTTGTTTT
TCAACAATAAAGAGTGAATTGCATTCAAACCGTGCAGTCATATTTTAtgg
tttaagaaaaattttgagagcatTGCCGTTGGTAGACTCAAATATTTGAA
TAACAAATAATAGacgtttttgatgttttaaagTGTGCCCGGAAAAAAAG
TGGTGCACCCATACAAAGGAAAATTTGTATGATTTTTGCAAGACACTACA
TTAAAAAACATTTATTAAAAATAATGCAGttttagttttgtttgttttta
gcatacttttgtatatattttgaaTAAAGATAAAAA
Run BLAST on NCBI

transcript from alignment at sc0000095:414371..423220+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009478 ID=TCONS_00009478|Name=TCONS_00009478|organism=Clytia hemisphaerica|type=transcript|length=8850bp|location=Sequence derived from alignment at sc0000095:414371..423220+ (Clytia hemisphaerica)
AAGAACTttacagaagaaattttacTTATCCAAAATTTTACCAATCCAAT
TTTCTTCCCTAAAGCTAAAGcagagttaaaaaatggaaaacaaaaaacta
ttATCACCAACACGGCAGAGTTTGTTTCGAGCATGCAAGTCTCCTGCTAA
ACAAGAAGATATCAGAATTCCAGAGCCAGGTAAAACGTATTTTATGTTAT
ACTCAAGGCTGAATTTCACGACTAGTCTTGTCATCCAGATCAGACTCAAt
caaactgaaaataattaattcaTTGACttaaacacatgattttcaaacac
attgtcttttttattcaaaattgtaGAGAAGAAGATCAAACTTGGAGCTG
ATTTGCTCAATGCTTTTCCAGAGATCgctgaaaattttgatattatcAAG
AAGGTTGGAGAGGgtaattattaaatatttcaagtGAAACAATTGACCAT
CAAGGACTTGCAGCTAGCAGGTTCACTGGTCCTCTGATAAAAAATTGGGC
TTTTTTAACTTTCGAATTTTGCTCCAAAAACACTCCAACACTAGTTTTCT
CTGGAGTATAGCCAAATGATCAGTGAATGGCTAACACAGGTCATTTAAAG
TATAATCTCAAAGTTTATATAAGATTTAATTGTTTAAAAAAGGTATTTAT
TTTTAGCACTGCTTAGCAAGACTAAtccaggaaaatattttttgcattat
tagttttcattttcactttctaagctttcaaaaatttcatatatacccgt
gacctgtgacctgtgttttacactaaccgtacAATCCCTATCATAAGTTa
ttttttactgtcagactaaTACTAGATTATCATTCAATTCATACAAAATA
ATAAAGGAAATAATCTTAATAAATCTTATCAACTTAAGCTTTTGATTGAT
TTATTAATTAATAATCATTAACTAATGAAATAATACTTTagattaatttc
attttctagGTACATTTAGCAAAGTGTTTCTTGCCAAAATGAAATGTGAT
TCATCCAAAAAGGTTGCTTTTAAACATCTAGTTCCAACAAGCTCGCCTGG
TCGCATAGAAAATGAATTAAAATGCTTACAAGAGCTAGGGTAAGTTTTAT
CATTCTATCCTTTTTTCTGTATAACAAAATTGGTAATATTGTGCTATCTC
AGCCTACTATCACAGCCGTCNGTATTTCAAGTGAAACAATTGACCATCAA
GGACTTGCAGCTAGCAGGTTCACTGGTCCTCTGATAAAAAATTGGGCTTT
TTTAACTTTCAAATTTTACTCCAAAAACACTCCAACACTAGTTTTCTCTG
GAGTATAGCCAAATGATCAGTGAATGGCTAACACAGGTCATTTAAAGTAT
AATCTCAAAGTTTATATAAGATTTAATTGTTTAAAAAAGGTATTTATTTT
TAGCACTGCTTAGCAAGACTAAtccaggaaaatattttttgcattattat
ttttcattttcactttctaAGCTTTCAAAAACTTCATATatacccgtgac
ctgtgacctgtgttttacactaaccgtacAATCCCTATCATAAGTTattt
tttactgtcagactaaTACTAGATTATCATTCAATTCATACAAAATAATA
AAGGAAATAATCTTAATAAATCTTATCAATTTATGCTTTTGATTGATTTA
TTAATTAATAATCATTAACTAATGAAATAATACTTTCgattaatttcatt
ttctagGTACATTTAGCAAAGTGTTTCTTGCCAAAATGAAATGTGATTCA
TCCAAAAAGGTTGCTTTTAAACATCTAGTTCCAACAAGCTCGCCTGGTCG
CATAGAAAATGAATTAAAATGCTTACAAGAGCTAGGGTAAGTTTTATCAT
TCTATCCTTTTTTCTGTATAACAAAATTGGTAATATTGTGCTATCTCAGC
CTACTATCACAGCCGTcgtagatttataaagccgGGTTAGATGTCATgct
ttaagcttttccaagcaacaaaaattgaaaatcgcaaaaaatattgttac
tATTGTTTTTGAACACCTGCgaggcttctgattggtcaagggttgaaatt
cttttgtaatgtcacttgacctaggtaggatttacTACATAGATaaggca
cacttttcagccaaaacacAATACTCAGCTGTTCTGATAACATAAAGTTT
TAGAAAGTGTAAAACAATTTCTGATTTCAGTTTGAATATTTTTCTCTCTA
GAATTTTGATTGGCAACTTGAAAATTAACATATTAAtaaattattaatta
ttttCCAGTTGTctcatctttttctttttatagtaATAAGAATAATGTTC
TTGGCATCAAGACAACACTGCGAAGGAACGATCACATTGTATTCGTCCTG
CCTTACTTTCCATACAGAAAATTTAATGTGAGCTATTAAGATTATTTGCA
TgttcctaaaaaaaattaaatctgtGAAATGCATGATAataaagtctgtt
ccaaaaattcaacataagaagacaaaataaccccagcgagatcgctcaat
gtttcaatttcagtctaaaaaggctgattttttCCAATTCTGGGTAGCAA
AGTGCATGAAAGcaggggttattttgtctttttatgttgaatattagtac
gaGACACCTTTTAGCAACCATTTTGCCCTTTTCCTGCCCATTCATGGCCT
TagaatgggcaaaaaatgccatttttactcatttttcccTTTAGTGAGAA
TCAAAGACCTCCCTGGGAAATGCTGGATTTTTGATCTAGGAGGTTAAAAA
TGGAGCAAAATGTTTTACAATAGATTtttactttcacaaaaaaatactat
actttgaattttttgacttcacatttgacgatctaccctattGTTATTCA
CTTAACAAAAAAGGAAGCAAAAGTATTGCAAAcgataattttcattttta
attgaattGCTTATTGCTTATCAGCTCAGTTGATAGAGCATTCACCTTAC
ACTCCAAGGGTTGTGAGTTTAATCCCCGGTCATCGCCAATTCAgcgaatg
agtagcttagattgggtaatttGTTCTAAGCAGTAAGTTACTGGgggctg
agagtaggtgtggcgctccacctcagtaTTCGATTTCCCTGGtctagaaa
aggggatagactccgtCATTCCTGGCTCCGCTGACACCCACCAGATGAAT
AAACTCACTTTACTTTCCTTATAATTGCAGGATGTGATGGACCGTATGAG
TGCAAATGATATTCAGAATTACATGAGAAACTTATTGATAGCTTTGAAGC
ATGTTCactcttataaaattattcacCGGGATATCAAACCAAGTAATTTC
CTTTATTGCCAAGAAACAGACAGGTACAATTATCGATATCATTTGAATTC
ATAAAATATTtaaggattaattaatcctttttgAACCTCTATACTTTGCT
TTATTCTGGAAAATCTGTTTATATAGCTATATTCAGCTTTTGTACCTAAT
TCCACCccttgaattttttatttttttctctcaacattttccacccagaa
cCCAGGCGGAATGCTTACTATGCCAGGGAATTTTAACTTGTGACGACTCC
ATTCGCCATTTCTGCGATGGAGCCACTGAAACCTAGTTTTGGATTCACAA
AGTTGTTGAAAAGTTTACTTTCAAATATAGTATCTAACTGTTTGTGTTTT
TCAGCTATGCATTGATCGACTTTGGTCTAGCCATGCCTGTCCCTGGAACA
AAAGGATGTTTCCTTTCAGGTGAATAGAAGTTTCTCATTGGTTCATTTAC
TGTACAATGCTCACACTTTTCCATCTCAAATGTGGATTTTCTTTActtac
tttcaaattttgaaggattCGAATCATTCACTAATTCTACCTAAAAATTA
CTTACATAATTAGTTATTTTCTGGGAAAGCCAAATCCGGGCGAATTCATT
ACAGTTCTACTTTGTCTTTCCTTAAAACATAGTTAATATAAGAAGTagaa
gatttttcaatattATTAATGGTTTTCTTTCAGATTACACTGCAACTGTT
GTGGGAATGTCAGACAATAAGAAGCCTTCTTCATCAAAAGCTTATGCTAA
ACCATGCAAGCACCCGAGACTTGATACATGTAACATCTGTAGAAATAGGT
GACTATACTTTATATTGTAcacaaatttcatgtttaaCCTTTGGAAACTA
CTTGTTACACTCATTGCAATATATCGAGTTAATTTTCTTCCCAGTTTTTG
TAGCGTCATTTCTCTACTTTGCATTATGTAACATAAACTTTCTTACGGAA
AAAcggtggtaaaaaagtgcttgaaaaataCCTTGCAATGTGTCCGCAGG
GTGGTCTGCAAATTTGTTAAACTGAATCATAATAAAAACAACGACAAAGA
AAAGCTTTCAGTCGGGGTACCAAAATaccttcaaatttcaaaaaaagttt
gttttcctTGATGTTTTATAGACCACGTCAAAAAGCACCGAGGGCAGGCA
CTCCAGGTTTTCGTTCACCAGAGGTATTGATGAGGTATCCTAACCAAACG
ACAGGTATTTGAATTATCTTATCCTAAACCCTTTTGGAAAGAGCTGAGTA
GAAGCTGTAGCAGGGTTGTTTAACATGGTTTTAAGTGAATAAGTAAGTtt
tcgaccgcagtcgagggtcacccaaaggctcccttttctctagctgtcta
cctTTCTTTGGATATCCCTTGATCAGTCACTTTAGCTGATAACCATCAAT
CAGAAAAGCATCAAGtatcattttgggaatcttaAGTATGACCCAACCCA
CAACTTTGTGCACGGCAgttggatgctctaccttcatgctacggctTTAT
GGTAGTTAAATTTCTATACAGGCATTTTAAGATCGACTGTAAATTTTGTG
TAAATTATTATCGAACTGGCAGTAGAACTTAAACTTTGATCTGAAATTga
cctttgaaattttttacccCATCTTTGTTTCTACTATCTTGCCTGTAACT
TTAGACATTTGcccataaatttttttgccaggCCTTAGCAGCGAACTTCT
ATACTAAAATGACTTCAAACAcattaaacttttgaaaagaattattttaa
tGATGTCCTAGAAAAGATTTCATGGATACTAAGGTTTGACCCTTACTNGT
TCAGATTACACTGCAACTGTTGTGGGAATGTCAGACAATAAGAAGCCTTC
TTCATCAAAAGCTTATGCTAAGCCATGCAAGCACCCGAGACTTGATACAT
GTAACATCTGTAGAAATAGGTGACTATACTTTATACTGTAcacaaatttc
atgttttaccTTTGAAAACTACTTGTTACACTCATTGCAATATATCGAGT
TAATTTTCTTCCCAGTTTTTGTAGCGTCATTTCTCTACTTTGCATTATGT
AACATAAACTTACTTACGGAATAAcggtggtaaaaaagtgcttgaaaaat
aCCTTGCAATGTGTCCGCAGGGTGGTCTGCAAATTTGTTAAACTGAATCA
TAATAAAAACAACGACAAAGAAAAGCTTTCAGTCGGGGTACCAAAATacc
ttcaaatttcaaaaaatgtttgttttccTTGATGTTTTATAGACCACGTC
AAAAAGCACCGAGGGCAGGCACTCCAGGTTTTCGTTCACCAGAGGTATTG
ATGAGGTATCCTAACCAAACGACAGGTATTTGAATTATCTTATCCTAAAC
CCTTTTGGAAAGAGCTGAGTAGAAGCTGTAGCAGGGTTGTTTAACATGGT
TTTAAGTGAATAAGTAAGTtttcgaccgcagtcgagggtcacccaaaggc
tcccttttctctagctgtctacctTTCTTTGGATATCCCTTGATCAGTCA
CTTTAGCTGATAACCATCAATCAGAAAAGCATCAAGtatcattttgggaa
tcttaAGTATGACCCAACCCACAACTTTGTGCACGGCAgttggatgctct
accttcatgctacggctTTATGGTAGTTAAATTTCTATACAGGCATTTAA
AGATCGACTGTAAATTTTGTGTAAATTATTATCGAACTGGCAGTAGAACT
TAAACTTTGATCTGAAATTgacctttgaaattttttacccCATCTTTGTT
TCTACTATCTTGCCTGTAACTTTAGACATTTGcccataaatttttttgcc
aggCCTTAGCAGCGAACTTCTATACTAAAATGACTTCAAACAcattaaac
ttttgaaaagaattattttaatGATGTCCTAGAAAAGATTTCATGGATAC
TAAGGTTTGACCCTTACTCTCGTggaatttttagtttttgatatGTTTCG
TCACTCTGTTTGTAGTGTTTTATGTTATCATCTTTTATTATTTCAGCTGT
AGATATGTGGGCTGCTGGTGTTGTTTTCTTATGTTTGTTATCAAGACGTT
ATCCATTCTTCAAAGCTAAAGACGATATGGAAGCCCTCTCTCAAATCATT
GTCCTCTTTGGCAgtaagaaaattaagaaaatggcTGACTCGATTGGTAA
NAGTTTGTTTTCCTTGATATTTTATAGACCACGTCAAAAAGCACCGAGGG
CAGGCACTCCAGGTTTTCGTTCACCAGAGGTATTGATGAGGTATCCTAAC
CAAACGACAGGTATTTGATGAATTATATTATCCTAAACCCTTTTGGAAAG
AGCTGAGTAGAAGCTGTAGCAGGGTTGTTTAACATGGTTTTAAGTGAATA
AGTAAGTTTTCGACCGCAGTCAAGGGTCACCcaaaggctcccttttctct
agctgtctacctTTCTTTGGATATCCCTTGATCAGTCACTTTAGCTGATA
ACCATCAATCAGAAAAGCATCAAGtatcattttgggaatcttaAGTATGA
CCCAACCCACAACTTTGTGCACGGCAgttggatgctctaccttcatgcta
cggctTTATGGTAGTTAAATTTCTATACAGGCATTTTAAGATCGACTGTA
AATTTTGTGTAAATTATTATCGAACTGGCAGTAGAACTCAAACTTTGATC
TGAAATTgacctttgaaattttttacccCATCTTTGTTTCTACTATCTTG
CCTGTAACTTTAGACATTTgcccataattttttttgccaggCCTTAGCAG
CGAACTTCTATACTAAAATGACTTCAAACAcattaaacttttgaaaagaa
ttattttaatGATGTCCTAGAAAAGATTTCATGGATACTAAGGTTTGACC
CTTACTCTCGTggaatttttagtttttgatatGTTTCGTCACTCTGTTTG
TAGTGTTTTATGTTATCATCTTTGATTATTTCAGCTGTAGATATGTGGGC
TGCTGGTGTTGTTTTCTTATGTTTGTTATCAAGACGTTATCCATTCTTCA
AAGCTAAAGACGATATGGAAGCCCTCTCTCAAATAATTGTCCTCTTTGGC
AgtaagaaaattaagaaaatggcTGACTCGATTGGTAAGGTCTCCTTCTG
TTTCAGGACATCAATCTGCCTGACTCAGAGAAATTAAGCCCTTGCATAGA
TAAAAGTCTACTTctgactaaattttgaaaaaatgcaatttaGAACGGAA
AACCGACATCTATGACCTATCAATAATTTCCCAATTATCGTTCACTTTCC
AAAGAGTAGCGCGAAATCTGATTATCTGTTTTTGATCATCTTCACCAAAG
AGAAATCAATATGGCACGATACTCTCGGGCCACTTAAACAATGTCTTCCA
GTATATCTCATTGAGTGGTTTTCACACTAGCCTTTACTCAACCTTACGTT
AAGCATTTACAGCTAAGAtacttcattttttgaattcgCATGCTATGAAT
AATTCTATAGATAATAAATTTGTGCTACTTAGAAACTTTTATAGTTTATG
GTTTGTGACTTCACTTGATCCAAATCCATGTCAGAGAATGGTCAATAAAT
TTGGGGAAGCCTTATAAACCATCGTCaatgaaacttttgaatttcccttt
ttctctACAGGAAAAACTTTCGATTGTTCACCTCCAGTAGAGAATCCGGA
CACTTTGAAAGTTATCTGTGAAAAATTAGCTCGCAGACAATGCTCTTTAC
ATAGAGACTACAAAGAAGGATCTGCAAAACGAAAACTTAGTGATCCAAGT
GCAGCAGCCACTAATAGTCCAAACAAGAAACAAGTAAGCGAGACAATAAT
TAAAGACTCTAATCAAAGTAATCGAATCTTAGCCGACATAACATTGGGTA
AGAACCGACTGACTCAATCAGAATCGACCTCAAAATGTACGAGTTCTATT
TCAAAGTCTAAAAAATCTAAACAACCAGTTTGTGCTTGTATACCTGAAAG
TGCGTATGATTTGTTGGGGAAACTACTTGAACTGAACCCTGATGATCGAA
TCAGTGCATCTGATGGTTTAAAACATCCGTTTATCACACATTATTGAGCG
TGGTTAGTTATCATTATAAAGAATCATTGCTAATTGGTGCTTGTGCTTTT
TACCGATTTTATGtttagaaaagtttttgaagaCCTGGATTGACTGGATT
CGTTCGTTcggtttttttgttttctacatttttttaaCTCCCTCCAAAGA
ATCACCCATTTGACTGTCATTAAAATTTTTATGTatggttctttttatta
ttatggGTTGTTTTTCAACAATAAAGAGTGAATTGCATTCAAACCGTGCA
GTCATATTTTAtggtttaagaaaaattttgagagcatTGCCGTTGGTAGA
CTCAAATATTTGAATAACAAATAATAGacgtttttgatgttttaaagTGT
GCCCGGAAAAAAAGTGGTGCACCCATACAAAGGAAAATTTGTATGATTTT
TGCAAGACACTACATTAAAAAACATTTATTAAAAATAATGCAGttttagt
tttgtttgtttttagcatacttttgtatatattttgaaTAAAGATAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005302XLOC_005302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009478-exon-sc0000095-1491911889:414371..414549TCONS_00009478-exon-sc0000095-1491911889:414371..414549Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1510915933:414371..414549TCONS_00009478-exon-sc0000095-1510915933:414371..414549Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1575043694:414371..414549TCONS_00009478-exon-sc0000095-1575043694:414371..414549Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1491911889:414697..414783TCONS_00009478-exon-sc0000095-1491911889:414697..414783Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1510915933:414697..414783TCONS_00009478-exon-sc0000095-1510915933:414697..414783Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1575043694:414697..414783TCONS_00009478-exon-sc0000095-1575043694:414697..414783Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1491911889:415330..415459TCONS_00009478-exon-sc0000095-1491911889:415330..415459Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1510915933:415330..415459TCONS_00009478-exon-sc0000095-1510915933:415330..415459Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1575043694:415330..415459TCONS_00009478-exon-sc0000095-1575043694:415330..415459Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1491911889:416654..416747TCONS_00009478-exon-sc0000095-1491911889:416654..416747Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1510915933:416654..416747TCONS_00009478-exon-sc0000095-1510915933:416654..416747Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1575043694:416654..416747TCONS_00009478-exon-sc0000095-1575043694:416654..416747Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1491911889:417551..417693TCONS_00009478-exon-sc0000095-1491911889:417551..417693Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1510915933:417551..417693TCONS_00009478-exon-sc0000095-1510915933:417551..417693Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1575043694:417551..417693TCONS_00009478-exon-sc0000095-1575043694:417551..417693Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1491911889:418025..418089TCONS_00009478-exon-sc0000095-1491911889:418025..418089Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1510915933:418025..418089TCONS_00009478-exon-sc0000095-1510915933:418025..418089Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1575043694:418025..418089TCONS_00009478-exon-sc0000095-1575043694:418025..418089Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1491911889:418354..418468TCONS_00009478-exon-sc0000095-1491911889:418354..418468Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1510915933:418354..418468TCONS_00009478-exon-sc0000095-1510915933:418354..418468Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1575043694:418354..418468TCONS_00009478-exon-sc0000095-1575043694:418354..418468Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1491911889:419913..419995TCONS_00009478-exon-sc0000095-1491911889:419913..419995Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1510915933:419913..419995TCONS_00009478-exon-sc0000095-1510915933:419913..419995Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1575043694:419913..419995TCONS_00009478-exon-sc0000095-1575043694:419913..419995Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1491911889:420667..420816TCONS_00009478-exon-sc0000095-1491911889:420667..420816Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1510915933:420667..420816TCONS_00009478-exon-sc0000095-1510915933:420667..420816Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1575043694:420667..420816TCONS_00009478-exon-sc0000095-1575043694:420667..420816Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1491911889:422281..423220TCONS_00009478-exon-sc0000095-1491911889:422281..423220Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1510915933:422281..423220TCONS_00009478-exon-sc0000095-1510915933:422281..423220Clytia hemisphaericaexon
TCONS_00009478-exon-sc0000095-1575043694:422281..423220TCONS_00009478-exon-sc0000095-1575043694:422281..423220Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:414371..423220 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.874335	5.06067	15.7511	5.22239	3.50349e-05	0.000743719	1.66991e-09	0	7.78623e-05	0.282597	4.0968e-06	0.792468	1.10361e-08	0.000202883	2.36442	3.81842	3.25013	2.63296	0.000266757	0.40914	0	0.000117354	2.58829	0.00117732	0.000249743	1.028e-06	0.000707429	1.87583e-07	0	0.00195651
Blast
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BLAST of TCONS_00009478 vs. Swiss-Prot (Human)
Match: CDC7 (Cell division cycle 7-related protein kinase OS=Homo sapiens GN=CDC7 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 5.022e-44
Identity = 85/204 (41.67%), Postives = 126/204 (61.76%), Query Frame = 2 
Query:   80 KMENKKLLSPTRQSLFRACKSPAKQE-DIRIPEPEKKIKLGADLLNAFPEIAENFDIIKKVGEGTFSKVFLA--KMKCDSSKKVAFKHLVPTSSPGRIENELKCLQELGNKNNVLGIKTTLRRNDHIVFVLPYFPYRKFNDVMDRMSANDIQNYMRNLLIALKHVHSYKIIHRDIKPSNFLYCQETDSYALIDFGLAMPVPGTK 682
            +M+     SP R   F+A  S  K E + ++   +K I+    L  A P+++  F I  K+GEGTFS V+LA  +++    +K+A KHL+PTS P RI  EL+CL   G ++NV+G+K   R+NDH+V  +PY  +  F D+++ +S  +++ YM NL  ALK +H + I+HRD+KPSNFLY +    YAL+DFGLA     TK
Sbjct:    8 QMDEPMAFSPQRDR-FQAEGSLKKNEQNFKLAGVKKDIE---KLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 207

HSP 2 Score: 135.961 bits (341), Expect = 1.153e-33
Identity = 87/235 (37.02%), Postives = 122/235 (51.91%), Query Frame = 2 
Query:  794 CNICRNRPRQKAPRAGTPGFRSPEVLMRYPNQTTAVDMWAAGVVFLCLLSRRYPFFKAKDDMEALSQIIVLFGSKKIKKMADSIGKTFDCSPPVENPDTLKVICEKLARRQCSL---------HRDYKEGSAKRKLSDPSAAATNSPNKKQVSETIIKDSNQSNRILADITLGKNRLTQXXXXXXXXXXXXXXXXXXQPVCACIPESAYDLLGKLLELNPDDRISASDGLKHPFI 1471
            C+IC +R +Q APRAGTPGFR+PEVL + PNQTTA+DMW+AGV+FL LLS RYPF+KA DD+ AL+QI+ + GS++  + A + GK+  CS  V   D L+ +CE+L     S          H  ++   +++     S      P +   +     DSN       +         +                        +P+ AYDLL KLL+LNP  RI+A + L HPF 
Sbjct:  360 CSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQD-LRKLCERLRGMDSSTPKLTSDIQGHASHQPAISEKTDHKASCLVQTPPGQYSGNSFKKGDSNSCEHCFDEYNTNLEGWNE------------------------VPDEAYDLLDKLLDLNPASRITAEEALLHPFF 569
The following BLAST results are available for this feature:
BLAST of TCONS_00009478 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDC75.022e-4441.67Cell division cycle 7-related protein kinase OS=Ho... [more]
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