TCONS_00009462 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009462
Unique NameTCONS_00009462
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2260

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009462 ID=TCONS_00009462|Name=TCONS_00009462|organism=Clytia hemisphaerica|type=transcript|length=2260bp
gccgatggataggatctagcattttgactgttttcggagcgcgagatcaa
aaaaattaggcggcaaacgctatttcacatctctcaaaccggtgaaattg
catattttagtcacgtgactctggtaggaaatccttccaaagatgagctt
cactttttgaacaaagctgcaaatctagcccttcgggctttacagatatc
tgtggtccaAAGTCCATACATGCACTCAAAAAATTCACGAAGGAAGTCTG
GAAAAGTCTGGACTGGAAGCTACTAGAAGTGGCTGGAACAAATGATAATA
AACAACTGTAAACTGCCAGTAACTATACAAAAACCACAAACAAAATAGCT
TTTGAAATATGGTAGTGAAAACTTGGAGAGAAGCAGCCACTTTGATACTG
GCTGTTAAAAGCAGTGCAAATGCTTACAAACTTCTCATGTTGCAGAGAAG
TGCAGCAAGTAAATTTATGCCAAATGCTTACGTCTTTCCTGGTGGTGTGA
AATCAGAGGCTGACTTTGAACCTGCATGGCATACTTTGctgaaagaaaga
aatcaaCACAATGAGAAATATGACAGAATTATAAACACTATAAAGGATAA
ACCCCTGCAACACGGCCTATCTTCAGAAATCGGATATCGATTATGTGCGC
TTCGAGAAACATTCGAAGAATCGGGAATTTTGATCGCAAACGATGAATCG
GGGAAAGAAATCGTTATATCGAATCCTAACGAACATATCGGTGGTGCATA
TTCGACTCTACAAGAATGGCGAAAAAATGTCTATGCAAACCCTGACAACT
TCTTCAAAATGTTCCACTCACTAAAATTATCACCAGGTATTGGGAACCTT
ATTGAATGGTCTTCGTGGCTCACTCCTTCGTTTGATCGATATCGCTTCGA
CACCATGTTTTACTTATGTTGTTGTGAGACCTCCCATGATGGTCTTATGA
CCGAAGATTTGCACGATAAGAAGGAATTAACTCGAACAGTTTGGGCTTCC
CCTAAAGAAATTGTGAATGATCATATTGGATTTTTGTTTCCACCACAGCT
ACTTGAAACTCAAAGAATGGAATGGTACCCGACGATAGAAGAACTGACGA
CGTTTGCTTTAGAACGTGAAAAAGAAGGTCTCGGCATGTGGTGCCCACAT
AAAACTATTCTCAAAGATGGATTCATTGTGACTTATCCTGGCGATGACCA
CCACAATTACGATGAAATTGCACCCTCATCCGAACTCAAAGAAACCACTA
TTGAAGAAATAAGACAACAAGCAACGAACCTCAATCGATATGAACTGAAC
ACTAAAACTAAACGAGTAGAGATACAACAAAACACTGATTGGTATGGACA
TAAACATCTTGGTCATGTCAACGTTGGAGAAATGACAATGCTCAATTAAA
GTTTACTGAAAAGGAGCATTTATATAAGTcgtgttttgaaaaattattga
gtatgaaattcgAGGTCAATGCTCTGACTCTTTCgattatgattaaaaaa
gattttcccgTCATCTGTGAATGAGGTCAATGGTTTTTCCACAAAACAAT
TGATTGAGTGATGTTGAGAATTTTTGGCAAGaggtttatttttcaaaaaa
gcatgCAGGGAACCATATCCTTCGAAAAATCAAATGTGATAAGAATTTAA
TGTTTTTGATGGGGGAAAAGTAAATGTGTTTTAGAACTTTCAAGATTCGA
TGCAAAGCAAGAGTGGCAAATTACACAAGTATTGGTCATAAATTGATATC
CTcgaacacccctgtgtcacagatcccAGCCTTACAGTAAGATATGGCCA
CATCCTCATTGGAAATTCAAGggaaaaaattgtactccaaaaccattccc
atTGGATTTTCCGACCTGAGAAAGGATTCCCCCATTGACATTCCGataga
agttttcaccaaactTCGGGAAAAATtctcaccggggctgtgagacaggg
gtgtcctcAACATGTATTTTTCATAACAAAGGAAAGCCTAATGCTCTAGA
CTTGTAAACAAGTCTGTAATTACTCTGGCTATAAGAACtatacaataata
ataataaaaaaagtaaactaTAAATGTCCGGCAAAAGGAGAATTACAGAC
TTGAAGCTTCTTCCAcgccttttttttcttcagctaAAATCATAAGCtca
gacatacagatttctgtatgtcagGTGCGTACGTGTTTgcgtttattttt
ctttcttttaattgCGTTTTAACAATTGTTCTTTTATTTCTATGTTCCTA
acttcaatgt
Run BLAST on NCBI

transcript from alignment at sc0000095:165395..179564+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009462 ID=TCONS_00009462|Name=TCONS_00009462|organism=Clytia hemisphaerica|type=transcript|length=14170bp|location=Sequence derived from alignment at sc0000095:165395..179564+ (Clytia hemisphaerica)
gccgatggataggatctagcattttgactgttttcggagcgcgagatcaa
aaaaattaggcggcaaacgctatttcacatctctcaaaccggtgaaattg
catattttagtcacgtgactctggtaggaaatccttccaaagatgagctt
cactttttgaacaaagctgcaaatctagcccttcgggctttacagatatc
tgtggtccaAAGTCCATACATGCACTCAAAAAATTCACGAAGGAAGTCTG
GAAAAGTCTGGACTGGAAGCTACTAGAAGTGGCTGGAACAAATGATAATA
AACAACTGTAAACTGCCAGTAACTATACAAAAACCACAAACAAAATAGGT
AAGAAAGCTGCTTGATCCTTGATAGTGCAGAACCCACGTTAAATAAAAAG
TTAAGTAGCAAAATAGACCTccagataaaaaaaaatcaaaaacagttGGG
TTGGCGGTAACGTAACAACGTGGTAAGTAGTCGTAGGATTagggattctt
ttgttttgtaggGGTATcagtagggttgggagctttgtTAAttatggtct
gtaaattacacactaTAAAAATTTGTGAATGACAACATTCTGCCGTGTCG
CCGTGTCTGGCTGGTTGGCGCAATCAGTTTTAggcatagaccttttttta
aagaggcagccatattgaataattatgtactccagcataaaaacaatgat
acagccatgcataattactgtatcatgcatattttaaaaattatgcatgg
ctgtaggTATCGTTGTTTTTATGCCGCAGGGGCGGATATAGGATATTTGA
AGACCTTGTGAAAGAAATCCGATTTCCCCAATTTTTGCTCAAAACCCGTT
TTTATCCCCGATTTTATTGCGTTTGTTCTTATAGAGCTNGTAACACCATC
TGATAGAGCAGGTCAAAAAaccatgatttttgaaaaaaaagattttttga
aaatttgtaacttACCTCCTTTGGCTCTGAAACGGCAGAATGGCTCTTCA
CCAccgaaaaaaaacacaaaatatgaTTTTAAAAGGTTTCTTTGAAAATG
CTATATGGCGGAGTGTATAGATTCTCTTTAAGAAACAGTGAGATATCATA
TTGTCAAATCAGTGTGTGTGTGTGAGAGAGGCAGTTTGCATTTTTGTGGG
AAAGTCAAAAGaaataataaagaaagaaaagtaaaTTGATTTGTANgcca
ttatggaagcaaatgtTCGAATCTCTAAACAAGATCTCTCACGCAAACCG
AAATCATTACTTCACGTTTCAATCATAGTCTTAGTGGCCCTTGCAATTTT
TACTCTCGACGACTTCATTCTActatcactttcattttttgaacctttca
acttttattaacaacaacaaaaatatttgaaatcaaaagtttgtctcgat
gtttttaagattttacttttacttcaaagttatttttggtTGAATAAGCG
AGAAAAATTTGCACGAAATTATGATTCTGTTGTTGTGAAAATTGAATTCA
CAAGGTCATAATGTATGCGTTTCGTGCAAAACTATgcaaaattatgtaaa
atacaCACATAATGCTGCCGTTTTAGAGCCAAAGGAGGTATGTAACAATT
TCTGAATATTCTGGATTTGGAATAAATTAAGAAAAACTTGTCAGAAGTAT
CAATTTTGACCATTTAGTACCAATTTTTACACTAAATATAAAGAATCTAG
CAAAGAATCGATTTCCATAAAATCTATTCAGATCTTATTGAAAGTATTTt
gattaattcattttttgttcaaaaatgtgTTACTTAcatctttttaagca
aaattttgGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNctctatcattgtttttatggctggactacataattattcaacagg
acgtcctctttgaaaaaaggtctataagacAAACCAGACAGTGTCAATCA
AAGGAATCGAGCGCCGAATTAATTGAACGTAATctaataattgcaattcg
attgtcaaacgcaatcaaatattacccaggatttgccgttcgattgcttc
gattacgttcgattgtatgcaattacgtttgattgattcaattgttgtat
tagattttattcgctttggtacGGTGCTTAAAGCACTTGGCCGCCCATGC
TAAAAAGCCCTAACGAAGTGATTGAATTTAgttgcaatcaaactcatcaa
acatacTCGCAATCAAACGAAATCAAAGATTAAttgaatgtaattgacaa
tcaagcgaaccaatcgaatatagtcaactatcaatcgaaccaatctaacc
ttactcaatcaacacaatcaaatattacccaagaatcggccgttcaattg
agattcaattacgttcgattatgctcgattggttcgattgcgatgtttgt
tcgaagttgtgtgtgtgtgtgtgagaGAGGCAGTTGGCATTTTCGCGGGA
AAGTCAAAAGaaataataaagaaagaaaagtaaaTTGATTTGtatacaaa
aagaagaaagagcgACGAGAAGCTTGTTATGTAAATTTTTCACACACGAC
TGAACATACAAGAAATTAAAGTCTTGTCTAATTCTTCAATCACTTGATCA
AGAAAATTGACCTTGTGAACGCACAACTTTCACAATGCTTGTATCCGCCc
ctgctggagtacataattattcaatatggctgcctctttaaaaaaaggtc
tattgggcaggtttgtaaaccaaggttgcttgtgCATTTGTTGGTTTGAG
CCAAGGTGGGAGACCTATTCCTATTTCACCGGTAGCTACAggtaaatttc
agaaaaatacttagaaaacagtttaTAAACATTTGAGAAtaatcagaaaa
tcaggatagtaGGGGCAGTTTCATAAATGATGAGTAAATAAAATATTGGC
CTTTTGGAGACATTTGAAATGACTGTTACGATTTTTTACtcatgataaaa
atgtaacaaaatttcAGAGGTCCTAGCTGCTGcagtcagttaggaacatt
tggtaATTTTCTGTAGGCGgccgcaaaaaaaaatcataacaaaactcatt
aaaaaatggcgtttatgtcttttctcattttttttagcctagacaatgta
gcaaacaaagtaagtataagcacactgtgcttttcattggctgaaatttt
ttttcgggtcagaaaaacttttgttaaatttcagccatgattgaccaaac
tgttataATTGTTGAATTCCACTGCCGCAATGTTTTTGCCAcaaattttt
tatatatgttACATTTTTACATTATGATTGACATTTAAAAAAGAGGTTTC
AGAGATGAAAAAGCAATCTAAATGATTTTTAGGACGAAATATAATATTTC
TTATAATCTTTCCAAAGAATGCGAAATGCTCTATTATAATTGCTAATGTA
ATTGGTGTAATAGAAGTGCATTCCCTGTTCTTTGAAGACATTTAAAGTGT
AATATTTTCGATTCCTGCTCGGTgctgtgattcacttggcaagtgaatgt
accttcgcccgggcaaacccatgccatgtgaggggaattgggtagacaga
aactcaagaaGCCTGTCGGTGACTGTGCTAGGTATCGATTCCACAATCCA
TCGTGGATGAGGTGAGAGTGCGCTGTCCTTGTTCCCTAGTGATTCACGCT
GGACTTAACACACTCGATCCAAAAACTGTGTGTTAGTGTCTCGCAAGCTG
GTCGCAGTATAAACCATCGCTTAGACGGTTCTAATGAGACGACTCCTAGA
CCGCTCAATACGGAACCGGGTGTCCTCTGCAAAGAGCAGCCAGTCATCAA
TCAATCATATGCAATTTTACACGTAGATTATCAGATTATGAAGCCAACAA
AGGATCTCTTGAAGAAACATTATTTACATACATActcattaaaacaataa
aaaatcatatcAAACTTCATATGTATATAATATCCTTTAGGAGAGAAGAA
ACTAAATCATACTCTAGCGGCAAGTGCGCACATACCCAAGTGTTCGCACA
AAGGGGTTAGTAGTAGTATGTTTGGGGTATTTAGCATTTCTTTTATATAA
AGCTCTTCATCAATCAGATAATTTCAATAGTTTAAAACTTTCTTGTTATC
TAGCACATATTACAAACCTACTCACACTGGCCTATACACTAATTGGCTTT
ACCCCTGGAAAGTATCTTATTTCGTTTAAGTACCTTCTTGTAGAGCCTGG
AAAATCTGCTCCAATGAAAAGCTTTTCAAGAAAGatttaacctgagatca
gattgtgattgttttctgcacaccacactgaagctctaaagagttatgtg
tgaaaacaaaacaatctgaCAAGTATGCAATCCTATTTTCTTGAGGACTG
TGCACGGTTTGACTGGGAGTGGCAATTAAAGTAGAGACAAAGTTGAAATA
GGGTGCggtatcaggaaaatttagtttttgactttctggcacACAACAAG
Atttgttgtagaattttatagaaactattttcctcagatggttaattttc
aagggccttcagaggtttaccatgcccgtaagaaaattatgaccagctgt
tatcaggttagaaaGATTGGGATGTGATAAAAGGGAACTTTTTGAAGAAC
AAGTTTCCTGAAAAATTTGGTAGTTGGTAGCAGACGGTTAAAGAAAATGA
ACTCGGTATGTGATGAGACTGTTGTCATGGCTGTTGACTTTGGCTAGACC
AAAAGACATGTTGTCACTTCTCGATGTACAAAGAACATATTGTAATCCCA
GAAAAAACCCTCAGGGTCACACCAATCACATACATAATCACAAAATCATT
TTCCCTGGATAACTTGAAAGTTTTGCATAATTGTAATTATTGTATCATTG
AGGAGCTTTATAAAAGAAACGCTAAGGGAGCTTAAACCAGATTTGAATGA
GCATGTCTCTTCATTTCCTCTTGAAATCTTTAAGATGTCTGCATTCCTTT
GTGATATTTTTATAACTTGATTACCTGATATGTGATAGTaatatctttaa
taattttatgatttttgaatgttgtaaattgatGGAACTTGTGATCCTGG
TGCAAAGAAGTTTTCACTAGTTTCATCATTAAGATTTATCTGGTCAagca
agaatttttttcaaatcagaCTAGTGAAAAACACCCAGGCTATTTTGGGT
GCTTCTGTATAAAACATTATTTCATGAATAATCATGAATTGCTTGATGTG
TATATTGCTATGTATTGATTTCAGCTTTTGAAATATGGTAGTGAAAACTT
GGAGAGAAGCAGCCACTTTGATACTGGCTGTTAAAAGCAGTGCAAATGCT
TACAAACTTCTCATGTTGCAGAGAAGTGCAGCAAGTAAATTTATGGTAAG
TTATTACTAGTTGAAAAAAGGCTTAAAGTGctaataattgaaaaaaaaat
tttttctctcagTATCAGTTCGACAGCGGACAACTTGTATTTAAGAAAAA
AGATGAGATTCTCTCTTGTAAGTACATACTAATCAGACTGACTTTTGACT
CCAGATGATCGTTTTTAACCCTGTTTGTACTAGGAAGGGGATCTTTCTGT
TCAATTAGGAAACTAAATGCTAATAGtttctgaaataatagagctatGGA
CTTTTTTTAAAGTCGTATTCATTTACATgcttttttgccaaatttataGA
TTTACTCTTTTGTCCATAACTATCCCCCCCTGCACCAACAAATTGACTCT
ACCCCTCATTCGAATGCtaataaaattatctttccaatatAGAAACCttt
aaactaattttttcttgatCAACCAAAAATTCTACTGGACTATTAAATCA
TTCTATATTCTTTGCATATTCTGAATTTGATTTCTCTGTTAGAACCTTTT
TCAAGCAGAGAGGctaaaatttttcgcagtacaTCATATTcactttaata
attttcttttctttttcataaaaCAGCCAAATGCTTACGTCTTTCCTGGT
GGTGTGAAATCAGAGGCTGACTTTGAACCTGCATGGCATACTTTGctgaa
agaaagaaatcaaCACAATGAGAAATATGACAGAATTATAAACACTATAA
AGGATAAACCCCTGCAACACGGCCTATCTTCAGAAATCGGATATCGATTA
TGTGCGCTTCGAGAAACATTCGAAGAATCGGGAATTTTGATCGCAAACGA
TGAATCGGGGAAAGAAATCGTTATATCGAATCCTAACGAACATATCGGTG
GTGCATATTCGACTCTACAAGAATGGCGAAAAAATGTCTATGCAAACCCT
GACAACTTCTTCAAAATGTTCCAGTAAGATTTCTCCTTTTTattcttttg
ctattttttatATCCCTAATTAGTTTTAGTCCATTAATTTCTACTAATGA
ACGAAAAAGAACTAAACATTAAACTCGGGTAAATGCTACACATACAGTCT
GATTGTCTTCTCTATAAAATGCTTTACACTTTTTTTGACATGGTTACTTG
AGTTAGTTGGGAATAATGTGATAAACCAAGggtaatttgaaatttcctta
CTTGGTAGTTAACGAATAcaatcaactctctctaattcgaatctatATTA
TTCGAGTCTTCCTTTAACTCGAAGAAATCTTTTTGTCCCTTGAAGATTct
ataattagtaattaactTTTTATGACGTCGAAGAAATCTTTTTGTCCCTT
AAAGATTCTATAATTGATAATAAGCTTTTTATGACATTTAAAATCTCTAT
GACAGACTGAGGCTCGTTCCCAAGCAGGTCCTCTTTCAAatgaaacaaaa
gtttttcgatttcgacgattttttaattgccgatgacgtcatcgatgacg
taattttttgagctattttcctttatagcttctcaaataCTGATTGTCAG
Gtatatgttgtgatattttttggaatcattggataaatatctttcatttg
agccatatatgagcttctaatttccactttcattttcaagccccagcaaa
agtggtcaaaatttttccaaccactcatttttgtgatcttatagacctaa
ttgatcatttaaataagttattttgctttttaaaaacaagtctgtgcaca
cgaagaacATTATAGCTCTCGATGCTCTCACTAATACTCCAGATGGTTGA
AAAATGAGCTTTGAGAAGTTAGGCAGTTTCGTAAGCGAACACATGATTTT
CCgttggtttttcaaaattttcaatttccagCTCACTAAAATTATCACCA
GGTATTGGGAACCTTATTGAATGGTCTTCGTGGCTCACTCCTTCGTTTGA
TCGATATCGCTTCGACACCATGTTTTACTTATGTTGTTGTGAGACCTCCC
ATGATGGTCTTATGACCGAAGATTTGCACGATAAGAAGGAATTAACTCGA
ACAGTTTGGGCTTCCCCTAAAGAAATTGTGAATGATCATATTGGATTTTT
GTTTCCACCACAGCTACTTGAAACTCAAAGAATGGAATGGTTTGTTTACA
CTTTTTATTGAAGATTCTCTTTGTTAACATGTTAAGAGACTGATGGAGTG
AGCCAATTTGACCATTTGTGAAGAATGATACCTAACATAGCTAAAAAGAT
TCATAAACTAATCATCCTTTAAACTAATTTGGTTCGAAGAATTTTTTCCG
TGAGACTTGAAATATGACTCCTCTCTTTCCTctctttaagggaagaaatt
ttggcgaaaatgTAATTTGGCTTCTGAGGGGATTAATTTTGCGGAtggct
tgaaaaattgaatttgacgggaatttacTTTGGTGGaggaaaatatttca
tttttgccAAAAGACGCTATTAAAAtaagtaaaatatattttaaaaggcc
tgaaatagcacacatttgaAGGATGAATAGAATAATTAAACTCTGGCAGA
TGgctggaaaaattaaatttggtgggaacttaattttgcagattttacta
aattttctttccgccaaaatttctccccTTAATGTACCTAACCGGAATTG
AATTAAAGATTGTCCTGTATGTTTTAAAAGATGAACTAATATAGAAAAAT
GTAGggtaaaggaagaaattttaagaaaacaaaaaaaaaccttttaatgG
CAATTAACTATGACGGGTTTGAGAAAGAATGCCCCatgtggaaaattttt
ttcttatggATTAATTGGGATGGCCATTCTTAGGTACTCGAGAATAATAG
AAGGGGTACGGCttatactcttaggtgccaaataaacgcccccccccgct
tgttaatttttcgatttttttccaaccccccggacgttattaggaccccc
ccgtttattaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccgtt
tatttggcacctaagagtacaagATATATATTTTGACAAATGATGCGATA
GATGCACTAGCTTTTTTATGAAAAGGGGGATTTTCAATATCAAGATTTGG
AACTATGAAATTCATTTCTTTTCTAGAAAAACAAATCTGGTACCGAACGT
TAGTTCTCTCATTGAATGGTCAAATTGGTTGACTCCAACCTTCCGTAAAA
AGCGATTCAACGCTAAATTTTACGTCTCGCATTTGAGTGAAAAGATACAA
CAATACGACGACAATTATGAAATAGTCGATTCTGATTGGTTTAAACCGAG
CACtgctttagaaaaattttccaataagGAAATATCTTTACAACTACCGC
AACTTTATGAGTTAAGCCGAATGAAAATGTAAGATTTTTTACTTCACTAC
TTATATGTCGAtgttttttttagaatgtaCCAAATTGTCTTTTTTGGGTA
TCTCCTGTTTTTAAGTCAACTTTTCTTAATGAAAGCTTTTACACGATTAT
TTCAATTTATTCTGAGAAAAAGAGATAGGATGAAATATTCAGATTTTTTT
AGTCCGGCTTTAACTGGATGAGTTAAACAGCTACAATTTTTAAGGACAAA
ATTAGGAGCAATCTAGGATGAGAGCTTCCTTCTGTGCGGATGGATGAAAA
ATTCCACAGTTAATTACGCCTCATCTATAACAGATTCCGTCTTGAAATTA
AAATCTCAAATGGTGTACCATGTAAATTATTAGAAAATATAAGCGGAATG
ACGAAAGGAGTAGAAAAGGATGAAATATtgcaaaaatattgataaaaaac
ggGTTGTCaaaaagaatgttttaaaaactgatggatattattttgaaaat
tacatgAGTGTAATAGTAAAGAGTGTATCTTTCAGAAAATAGCACTATAT
TCACCAAAAGAGTGACATAGGAtgaaatattccactttttatGTCACCCG
AAATCGAAAATTGTGGAATTCTTCATCCTTTTCTACttcttaaatttaaa
tttgaaaatttctgatatCAGCAATAGGTTTCTGAAGGGTTTAGATAATA
AAACCgttttaaaaaattgctatagtaaaaatcagaaaatcttgattttc
tgGAATATTTCATCCCAAATTACTCCGAAACATCATTGGAATCCTCGTGA
AAAAATACGTCATTACTGAAAATAAGGtccaaaaattcctaaaattggAG
AAGATATCGCgaaaaagatgattttaaaGATCTCTGAATTGTCATTCAGG
TACATTCTAAAAAAACACCGACTTAtgcttttcgtcaatttattttgcgc
cctgtctattctaattgttaggagaagtaagcaaaaaaatgaacaaaaag
ttgGAAGTCGAAAATTTGATTTAAATACATTTTGAAAGGAGTCATCGCGT
TTTTGACGACAAAAGAAGCCAATtaccactttaattcacaattagaataa
gCCTGGGCAAAAGAAGTCCATCTACTTTCGGGTAcctaatatttttcaaa
aatccaggacATTTTAATTCCAGCCCCTTCTGCTcattaagttttgagaa
tttttccaccCACCCAGCTTATTCCAAATATTATTAATTCCCgtctatta
ggtacccgagagtaacaaacaaacaaggaagGCTTGAGTTGATGAACTCC
ATTgtacagtagcgtagacaagggggaggagcgcaaaatttgtgtgggag
agcagatttttattacacagcaattatctttttatattacaTATAGataa
ttactcttaggttccagaTAAACGggcccccgcttgttaatttttcgaaa
attttctaacccccccggaccttattaggacccccccccgtttattaatc
tctaagaatattttcagctgtcaaagtgAAGGCCcattattttgctctaa
atagcctgattatagcctatttttaccttatttttaggtttcaaaagtac
aatttccaaccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcttttt
gttaaatttggcggggatttaatttggcgaattgccgaatttcgaaattt
tggcgaggatttaatttggcgaattttggccaaattcgccaaattcgcca
aatttaatccccgccaaaatttatccacttaaggtaattcCAGCCCCTtc
tgcttattaagttttgagaatttttccaccCACCCAGCTTATTCCAAATA
TTATTAATTCCCgtctattaggtacccgagagtaacaaacaaacaaggaa
gGCTTGAGTTGATGAACTCCATTgtacagtagcgtagacaagggggagga
gcgcaaaatttgtgtgggagagcagatttttattacacagcaattatctt
tttatattacaTATAGataattactcttaggttccagaTAAACGggcccc
cgcttgttaatttttcgaaaattttctaacccccccggaccttattagga
cccccccccgtttattaatctctaagaatattttcagctgtcaaagtgAA
GGCCcattattttgctctaaatagcctgattatagcctatttttacctta
tttttaggtttcaaaagtacaatttccaaccccccNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNaatttccaaccccccccccggcaattaggtccc
cccgtttattaaaatctagaaaattttccaacctttccgtttatttggaa
cctaagagtacagtgtcataaaaatctgctctcctacacaattTTTGCgt
ccctcctgtctacgctactgttgtATGTTTTTTGGTTTGTTGATCTTCCA
ATTTccattttattgatttattttcgGTTCAGGTACCCGACGATAGAAGA
ACTGACGACGTTTGCTTTAGAACGTGAAAAAGAAGGTCTCGGCATGTGGT
GCCCACATAAAACTATTCTCAAAGATGGATTCATTGTAAGAATTGTTATT
GCTGTGTTTTTCTTTCTCGATGTCAGAATCACGTATTTTTAACTTCCTAA
CTTCTCTTACTAAGATGAACATTTCCCAACCTTAATCATAGTATTATAAT
CTCTAATTGGTCAGAACGGCCACCGTTGGGTTGGAATAATTGAGGGGAAA
TACTAGCCTTGCGCTAAAAGCTTCATGAAAGGGTGGGAGCAAATGGTGTC
AAATGCCATTGCATTGACATACTCATTGGAATGAATTCACTTTGTAAATA
GCACCTTCTTGAGCTTTAACTAACATTTTACATTCAGGTGACTTATCCTG
GCGATGACCACCACAATTACGATGAAATTGCACCCTCATCCGAACTCAAA
GAAACCACTATTGAAGAAATAAGACAACAAGCAACGAACCTCAATCGATA
TGAACTGAACACTAAAACTAAACGAGTAGAGATACAACAAAACACTGATT
GGTATGGACATAAACATCTTGGTCATGTCAACGTTGGAGAAATGACAATG
CTCAATTAAAGTTTACTGAAAAGGAGCATTTATATAAGTcgtgttttgaa
aaattattgagtatgaaattcgAGGTCAATGCTCTGACTCTTTCgattat
gattaaaaaagattttcccgTCATCTGTGAATGAGGTCAATGGTTTTTCC
ACAAAACAATTGATTGAGTGATGTTGAGAATTTTTGGCAAGaggtttatt
tttcaaaaaagcatgCAGGGAACCATATCCTTCGAAAAATCAAATGTGAT
AAGAATTTAATGTTTTTGATGGGGGAAAAGTAAATGTGTTTTAGAACTTT
CAAGATTCGATGCAAAGCAAGAGTGGCAAATTACACAAGTATTGGTCATA
AATTGATATCCTcgaacacccctgtgtcacagatcccAGCCTTACAGTAA
GATATGGCCACATCCTCATTGGAAATTCAAGggaaaaaattgtactccaa
aaccattcccatTGGATTTTCCGACCTGAGAAAGGATTCCCCCATTGACA
TTCCGatagaagttttcaccaaactTCGGGAAAAATtctcaccggggctg
tgagacaggggtgtcctcAACATGTATTTTTCATAACAAAGGAAAGCCTA
ATGCTCTAGACTTGTAAACAAGTCTGTAATTACTCTGGCTATAAGAACta
tacaataataataataaaaaaagtaaactaTAAATGTCCGGCAAAAGGAG
AATTACAGACTTGAAGCTTCTTCCAcgccttttttttcttcagctaAAAT
CATAAGCtcagacatacagatttctgtatgtcagGTGCGTACGTGTTTgc
gtttatttttctttcttttaattgCGTTTTAACAATTGTTCTTTTATTTC
TATGTTCCTAacttcaatgt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005299XLOC_005299Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009462-exon-sc0000095-1491911889:165395..165742TCONS_00009462-exon-sc0000095-1491911889:165395..165742Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1510915933:165395..165742TCONS_00009462-exon-sc0000095-1510915933:165395..165742Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1575043694:165395..165742TCONS_00009462-exon-sc0000095-1575043694:165395..165742Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1491911889:170969..171089TCONS_00009462-exon-sc0000095-1491911889:170969..171089Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1510915933:170969..171089TCONS_00009462-exon-sc0000095-1510915933:170969..171089Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1575043694:170969..171089TCONS_00009462-exon-sc0000095-1575043694:170969..171089Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1491911889:171671..172017TCONS_00009462-exon-sc0000095-1491911889:171671..172017Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1510915933:171671..172017TCONS_00009462-exon-sc0000095-1510915933:171671..172017Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1575043694:171671..172017TCONS_00009462-exon-sc0000095-1575043694:171671..172017Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1491911889:172926..173183TCONS_00009462-exon-sc0000095-1491911889:172926..173183Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1510915933:172926..173183TCONS_00009462-exon-sc0000095-1510915933:172926..173183Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1575043694:172926..173183TCONS_00009462-exon-sc0000095-1575043694:172926..173183Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1491911889:178077..178179TCONS_00009462-exon-sc0000095-1491911889:178077..178179Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1510915933:178077..178179TCONS_00009462-exon-sc0000095-1510915933:178077..178179Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1575043694:178077..178179TCONS_00009462-exon-sc0000095-1575043694:178077..178179Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1491911889:178482..179564TCONS_00009462-exon-sc0000095-1491911889:178482..179564Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1510915933:178482..179564TCONS_00009462-exon-sc0000095-1510915933:178482..179564Clytia hemisphaericaexon
TCONS_00009462-exon-sc0000095-1575043694:178482..179564TCONS_00009462-exon-sc0000095-1575043694:178482..179564Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:165395..179564 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.32417e-07	0.216281	6.44488	5.35737	0.712862	1.92991	0.975206	7.28778e-10	2.95962	2.16583	1.77456	1.9286	2.22436	4.05633	1.15058	1.96703	2.99945	3.81622	0.178849	0.423984	1.73438	2.04688	1.3477	1.68866	6.02752	5.27222	0.174929	0.310352	2.40243	0.187538
Blast
[Close]
BLAST of TCONS_00009462 vs. Swiss-Prot (Human)
Match: NUD19 (Nucleoside diphosphate-linked moiety X motif 19 OS=Homo sapiens GN=NUDT19 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.435e-33
Identity = 99/337 (29.38%), Postives = 145/337 (43.03%), Query Frame = 2 
Query:  374 WREAATLILAVKSS-------------ANAYKLLMLQRSAASKFMPNAYVFPGGVKSEADFEPAWHTLLKERNQ-----------HNEKYDRIINTIKDKPLQHG-LSSEIGYRLCALRETFEESGILIANDESGKEIVISNPNEHIGGAYSTLQEWRKNVYANPDNFFKMFHSLKLSPGIGNLIEWSSWLTPSFDR---YRFDTMFYLCCCETSHDGLMTEDLHDKKELTRTVWASPKEIVNDHIG---FLFPPQLLETQRMEWYPTIEELTTFALEREKEGLGMWCPHKTILKDGFIVTYPGDDHHNYD-EIAPSSELKETTIEEIRQQATNLNR 1288
            WR AA+++LA   S             A  ++LL+LQRS    FMP A+VF GGV   AD    W  L    +                +  + +T   K    G L  ++ +R+CA+RE FEE+G+L+    +                   L  WR  V  +P +F ++   L  +P I  L  WS+WLTP F R    RFDT F+LCC              D  E+    W+SP E     +    +L PPQ  E +R+  + ++ +L  F L R  EGL  W P   +  DG +   PGD+ +  D +   +    E   EEI ++    +R
Sbjct:   12 WRRAASIVLAAGWSRPETATPPSRPPPAEGFRLLLLQRSPHQGFMPGAHVFSGGVLDAADRSADWLGLFAPHHGPPRFGLGPAPFSRTAFPSLPDTDDHKTDNTGTLPEDVAFRICAVREAFEEAGVLLLRPRTSPPGPAPG-PGLALEPPPGLASWRDRVRQDPRHFLRLCAHLDCTPDIWALHNWSAWLTP-FLRGTTRRFDTAFFLCCLREP-----PPVYPDLAEVVGYQWSSPSEATESFLSKEIWLPPPQFYEVRRLANFASLSDLHKFCLGRALEGLERWLPIILLTADGMVHLLPGDELYLEDSDFLENLMSTEKKTEEIMKEGKQFHR 341
The following BLAST results are available for this feature:
BLAST of TCONS_00009462 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NUD191.435e-3329.38Nucleoside diphosphate-linked moiety X motif 19 OS... [more]
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