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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009430 ID=TCONS_00009430|Name=TCONS_00009430|organism=Clytia hemisphaerica|type=transcript|length=1275bp
GCCCCTCACCCCAACCCCCCCTCCTAGGCCCGGTAACTCATTTCGAAGAT
TTTCACCTCTTCTAAATTCAACGGTGGAGGGTGGCTCGTTTCAATCGTTG
GAAGTTAATATATTCATAAAAAGAAGAAGTTCCCTGGTGTATAGTGGATC
AAGGAGGTGGATTTTATCGTAAAAAGGAAAGGAACTGTGCCTTTGTATTA
ACCatatgtttcaaagaaaaaaaattcattccgcagttttgaaaaatatc
tccttcaaagaattttttttataagcagtgTTTTAGCTTTCATGGAAATC
TTAGACTATATTTCTGATCTTAGGAGAGTTTAGTGTCTTCAATATTAATT
TGACCCTTAGATAATTAGGCCCCCATGGGGTACTACATTTACCGGATGGT
GCATCGGTCGTTGAATCGGAAATTTTGGGGTGTAAACTGAGAAAACGAAC
GGAAACTCTCggaattttgaatgtccagaaAAGACATCCTTAAGCGCGAC
AGGTACCCATATCCTCCATTTTCCTTGGCACACCTCCATAGAAGATCGTA
GCAATTATATTTCAGACCAAGCTTTTACATCTCTTACGCCTTTTTGGTAA
GAATACGAGCTTCAACCTCGTACCCGTGCATTCTAGGCTTTATTTACGat
actgatggacgccagagaataccctggtggaAGCTGATGCGAGTTTAAAA
CTTGGAGGGATAATCAGAAATGTTTTTCCCCCGgctaaaaaatcataaac
ttaAGAAGACCcgccgaaggcttcaaaaatgtcaatGTTTCTTGTGAAAA
AACTTGTAATAGAGAAAACACGTTTCTAAACATTTCTGTCAGGTGGTTGA
AGAATATGATACTATTTTTAAATCGATTTGTTTGaagaattcttttattt
ttgatatcgAACACTTGGACaacaataaaataatattttgtaaaCCTTTC
TCATAAGAATGTTCAACATTTTCtgttgttcttaagattttgagcAGCTT
ATGCATAAGTCTCGAGCTTTTGTATTCTAAAGTGTTCGCTTTGTACTACT
ACTAGCATATATTTTAAGtcaaattcttataaaaagttgtTAGTCCAAAA
ACTTGTCTAGAACCTAGGTGAGGTctttttattgatattttgtactattt
tgtccCATATGCctattattttttattcaaaattatcaaaaatataaata
aggGAGGGCTTGAATAATTTAGTAGGCCACACTTTAGTGTTGTATTAAAA
ATTAAGATGTTTTTGTTTGGAGGTg Run BLAST on NCBI transcript from alignment at sc0000093:519720..520994 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009430 ID=TCONS_00009430|Name=TCONS_00009430|organism=Clytia hemisphaerica|type=transcript|length=1275bp|location=Sequence derived from alignment at sc0000093:519720..520994 (Clytia hemisphaerica)
cACCTCCAAACAAAAACATCTTAATTTTTAATACAACACTAAAGTGTGGC
CTACTAAATTATTCAAGCCCTCccttatttatatttttgataattttgaa
taaaaaataatagGCATATGggacaaaatagtacaaaatatcaataaaaa
gACCTCACCTAGGTTCTAGACAAGTTTTTGGACTAacaactttttataag
aatttgaCTTAAAATATATGCTAGTAGTAGTACAAAGCGAACACTTTAGA
ATACAAAAGCTCGAGACTTATGCATAAGCTgctcaaaatcttaagaacaa
caGAAAATGTTGAACATTCTTATGAGAAAGGtttacaaaatattatttta
ttgttGTCCAAGTGTTcgatatcaaaaataaaagaattcttCAAACAAAT
CGATTTAAAAATAGTATCATATTCTTCAACCACCTGACAGAAATGTTTAG
AAACGTGTTTTCTCTATTACAAGTTTTTTCACAAGAAACattgacatttt
tgaagccttcggcgGGTCTTCTtaagtttatgattttttagcCGGGGGAA
AAACATTTCTGATTATCCCTCCAAGTTTTAAACTCGCATCAGCTtccacc
agggtattctctggcgtccatcagtatCGTAAATAAAGCCTAGAATGCAC
GGGTACGAGGTTGAAGCTCGTATTCTTACCAAAAAGGCGTAAGAGATGTA
AAAGCTTGGTCTGAAATATAATTGCTACGATCTTCTATGGAGGTGTGCCA
AGGAAAATGGAGGATATGGGTACCTGTCGCGCTTAAGGATGTCTTttctg
gacattcaaaattccGAGAGTTTCCGTTCGTTTTCTCAGTTTACACCCCA
AAATTTCCGATTCAACGACCGATGCACCATCCGGTAAATGTAGTACCCCA
TGGGGGCCTAATTATCTAAGGGTCAAATTAATATTGAAGACACTAAACTC
TCCTAAGATCAGAAATATAGTCTAAGATTTCCATGAAAGCTAAAAcactg
cttataaaaaaaattctttgaaggagatatttttcaaaactgcggaatga
attttttttctttgaaacatatGGTTAATACAAAGGCACAGTTCCTTTCC
TTTTTACGATAAAATCCACCTCCTTGATCCACTATACACCAGGGAACTTC
TTCTTTTTATGAATATATTAACTTCCAACGATTGAAACGAGCCACCCTCC
ACCGTTGAATTTAGAAGAGGTGAAAATCTTCGAAATGAGTTACCGGGCCT
AGGAGGGGGGGTTGGGGTGAGGGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009430-exon-sc0000093-1491911889:519720..520994 | TCONS_00009430-exon-sc0000093-1491911889:519720..520994 | Clytia hemisphaerica | exon |
| TCONS_00009430-exon-sc0000093-1510915933:519720..520994 | TCONS_00009430-exon-sc0000093-1510915933:519720..520994 | Clytia hemisphaerica | exon |
| TCONS_00009430-exon-sc0000093-1575043694:519720..520994 | TCONS_00009430-exon-sc0000093-1575043694:519720..520994 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000093 | supercontig | sc0000093:519720..520994 . |
Blast
The following BLAST results are available for this feature:
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