TCONS_00009365 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009365
Unique NameTCONS_00009365
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1785

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009365 ID=TCONS_00009365|Name=TCONS_00009365|organism=Clytia hemisphaerica|type=transcript|length=1785bp
AATGAATAATGGTCGTGTTACATgaagaacaaaaacaagaaaagtAAGGA
AAAATAACAGATTGGAAAAAACGTTAGAATCTCaacacaacaaaaacaaa
acgatGAAAGGTGTTtggcttgaaaaaaaagaattgacatTTCGTCATGA
TATTCCTGAAGATTTCCCGGAAGATGAAGTCTTAGTCAAAGTGTTACGTT
CTGGTATCTGTAATACAGATATTGAGTTGATGAAAGGTTACTATCCATAC
ACTGGCATTATTGGTCATGAGTTTGTAGGTGAAGTCGTTGACAAGACAAG
CGAGTTGTACAGTAAGAGAGTGGTAGGTGAAATTAATTGTTGTTGTCATC
AATGTCGCTTTTGTTTGGAAGGGATGAAAAGTCATTGCTCGAAACGTACA
GTCATGGGTATAATCAATCGGTCAGGTACACATGCAGAATACTTAACACT
GCCTGCTGAAAATCTTCTTTCCGTTCCTGAAAACGTTTCCAATAGCGACG
CTTGTTTTGTAGAACCACTGGCTGCCACTCTTGAAATACAAGAGCAATTG
ACATTTACTGAAAAACATAAAGTCGCTATAATTGGGGATGGAAAATTGGG
TCTGTTAATTGCCAAAACGATAGCGTTAACACCATGTCAGTTAACAGTCT
TTGGTCGCCATCAAGAGAAACTTGACATTTTGAAGTAtgataatttacag
accagaataggtgTTGAATCTAGTGATGCGTCCGCATTTGATATTGTGGT
CGAATGCACTGGTAACGAGGAGGCCTTTAACCAGGCTATTAATTTATTAC
GCCCTAGAGGTACTTTAGTTATGAAAAGCACCCATGAAGGGAACACAAAG
ATCAATGCAGCCGCTGTAGTTGTTAAAGAATTAACTCTCATTGGCTCTCG
TTGCGGACCCTTTGATAAAGCACTTGCTCTTTTGGAACAGAGGAAAATTG
ATTTGACTGGTTTACTTCAGAAGACTTTTCCGTTGACGGAAGCGATGGAC
GCTTTTGAGCATGCGCAAAGGAAAGGTGTAATGAAAGTTCAATTAGTCAA
TGAGTGATGGAGCATGAAAGGCCGGGGGGGgtagtcaggcaaattgaccg
acggttATGATTAGaaatgcactataagggttggctTTTGATCAATGCAA
TGTAAGGGCATGAATTTCACTGATCTTTTGTTGCCCTGTAAGGATGCAAT
TttgaagccaattttttcgccgcacatactgTCAGTTGGTAGACCCACTA
CCCCCTCCTCTggatatataaaaaaagaaaatgacaatCAATCTAAAAAT
AATGCTGAGTAACTGATTTCCTTCCAAAGTTCCTTTTGAATAAAGCACCA
GAAGATGCGATCCAGACAATAATTTTGTATCGGTGTTGTGTTTCAAAATC
GCCTGTTGGGTACATGTCTTCACAAAACCATTCattaattttatgtttta
acattttcaaatagcAATAGAATTTTATACGACCTACTTTAATgtgataa
attttcgcgggggtTGAATTTCGTGGATTCCCTAGCCTCACAGAAGCGCT
AATAAcgcgtatttcaacaaccactATGCTTAATTTGgcaataaaaagac
acaaaatcatgaaaatattgtctTCTAAGAATGTCATCCGCAAAATTcag
tccccgcgaaatcttaaaatttcgcggatgggtCCAATTATACTAGTTTT
AATCCCcgtgaaaatttatcccattaaagtatatctTATATATTTAACCT
TAAACGCATTGTAACCAATAATATTTTTATACGAC
Run BLAST on NCBI

protein sequence of TCONS_00009365-protein

>TCONS_00009365-protein ID=TCONS_00009365-protein|Name=TCONS_00009365-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
MKGVWLEKKELTFRHDIPEDFPEDEVLVKVLRSGICNTDIELMKGYYPYT
GIIGHEFVGEVVDKTSELYSKRVVGEINCCCHQCRFCLEGMKSHCSKRTV
MGIINRSGTHAEYLTLPAENLLSVPENVSNSDACFVEPLAATLEIQEQLT
FTEKHKVAIIGDGKLGLLIAKTIALTPCQLTVFGRHQEKLDILKYDNLQT
RIGVESSDASAFDIVVECTGNEEAFNQAINLLRPRGTLVMKSTHEGNTKI
NAAAVVVKELTLIGSRCGPFDKALALLEQRKIDLTGLLQKTFPLTEAMDA
FEHAQRKGVMKVQLVNE
Run BLAST on NCBI

transcript from alignment at sc0000093:460322..477348+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009365 ID=TCONS_00009365|Name=TCONS_00009365|organism=Clytia hemisphaerica|type=transcript|length=17027bp|location=Sequence derived from alignment at sc0000093:460322..477348+ (Clytia hemisphaerica)
AATGAATAATGGTCGTGTTACATgaagaacaaaaacaagaaaagtAAGGA AAAATAACAGGTATGtaactaattttatttttattttcatttttattcta ttttgaaattaattcatATTTCTACGTCTCTAAAATTTCATAgttgtcat ttaaaaaaaattactatgTATAAAATACTTGACCCCCATCCCAAGAAATG TCCTATATAAAAACACCTTTACTTTAGGAGTAAGCTTAACATTTATGCCC AAGGTTTTGGAACACTTTAATTCTGTGAATTTAAAACAAAGTCGCCCTAG CGAAGGCTCTGTCAAAGTATTGAAAATTATGAtacaaatttagcaaaaat gtCCTTTAAACATTTAACTTTTTATGGCGAATATAGTTTTTGGCAAAAAT GTGTATCATTACCGCTCTTACGAAACCTAATTGTTGATGGTTTTAAAATG AACGTTTTAGTTTTTGAAACGAGAAATTACTAAAATCGAACAAATATCAA TTATCAGGGAATAGCTCCGGGGTGTTTGGTGTTTTCTATCTATTATAGGT ATCCAAAAATTACTGAGTCTTTCCGAGGGCAACCaagacaaaacaaaaca tcttaACAACATCCATGTCGCGACTATAATATCCATATAACGTGAGTAGA ACTTTGAATTGCCGCGTCGTGTGCCTGCCTGGATAACTAGTACATTCCAA CCAATCAAAGTCTTAAAACAGACTTAACTTTGGACAAAATTGCAAATGAC AACACGGTCAAGCCTTTCGCAGGAAGTTTACATCTGTGGGTGGCATTCTA CTTCTAAATCACATTTGATCCCTCTCTAacatctaaaaaaagaaaacaat gaatAAGAATTTTTAGTAAAGAAAGATGAAGCTCGAACACTTCCTAAATA CAGTCCAATTTCTAATTAACAAAACTCGACAACACAACAACTCGTCAAAA TTTTGGATTCATTTTTTGGTGTTCTTTTTGAGTCTGCATTGTTGAAGCCG TAGCAATTTTTATCAACTTCTCTTCTTCTAACAAAACTATTAGTCTAAAA AGGACAATATATaaacacaatatattgacgagaaatattcaacaaaatag ttttcggaccgtaatgtacaaAGTAAACATcaggtactctattataaaaa gaaattttttctttaaaaatccctctatattgttggaatattgcaaatcg agctgacaatatattgcggacaccttaaCAATATATTGTCTGTATAAata aattgccaatatattacctggcaatatattgtgtagtgtatgtagccctt aagtATAGATTAGGACCCgcatttttaaggatttttagaTCGCGCGGAAA AAGAGTCTTTTCGTGAAATGAGGTCAAACAGAAATTTTTGCACTTTCTGT TACAAAGAAAGATACTGTGATATGCGATTTCGGAGGTTTTGCAATATTTG AAATATGAACTTCTAGTTTTTCGTTTAACTATGTATCACAGCGCAGACTT TCTCGTGATTTCCGCGTGACTTTTATGAGAAAGTTTGCCTTCCAATAGAG CTGTTTTCATCAAAGTTCTATACTAATTTACCTACTAACTATTCATTGCA TAATATATACCTAGTATAGCCTAAATTGCGAAAGCAGCCGGTTTTCAACT GACtgtaaaggggggggggggttcgaaaaaccgttttcccgccaaaattt ttgctgaatcccggaatctcgaaaagtgaaaaaaataataacaccgtcac agcGGTTTGTACAACCGTCACCGtctaattttaaaataccgttttcccgt cataatttttgctgaatcccggaatctcgaaaagtgaaaaaaataataac accgtcacagcGGTTTGTAcaaccgtcaccgtctgattttaaaataccgt tttcccgtctttttttcgtcaaatcccgtaataccgtactaaaaaaggcc caatcccgtcacaccgtaaaagtacaacccccccctGTAAAGGCTCTAAT AAAACTTAAATATTTAAAGCGGGGGCGAGCTCAGCTCAaggtttttaaca taaaagtgaAGTTCTAGGGATTTTAGAATAATATAACAACCTTTCATCAG CTGAAAGGTTTACTTATTTTCACAAATCTGTGCATTTTTAAAGCGGTAGT TTTTGGTtttatcccgggggggggggcagctgggcaaaaggcccgacggg tatgtgcgggtcctaagggtaccttttccaacatgtttaaaatgcactgt aaggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNcccccccccccccggggttttatccttaaaataaa gggataattcGTTAAATTCATGAGAATtgcaaatttttacattttatttg cCTCGCAAAAGCAGTTTTGACTCACAAAGAAATTAtaagttacacgtttt ttaatataagaacaaactataagaacataagggttCGGTTGCAaagatat taagaacaagttaagaacattttcaggcttgaaactcaaaaagttaagaa catccgaaggcttcaaaaattttgaatgttcttataaaaaaacgtgtacc taaaaataaaaacaagagaaaaaaaacttgaGTAAGAAACAAACCTTTAT CTACACACCTTGTTGCGATGCTGCGTATCCACCATTCGTACTGTAGGCTA CAGACACATTTTGAGAATTTATTGAAGTTCTTTGTTGTTGTTCCTCAGAG CTAACAGGAGCCTCTACGTCGTCAACATGGCGGTCATAACTATTCTCCAG CTTGCTATATAAACGATAATACATATAACGCCCTCCACACATTAGGCAAA TACCAAGACCGATCATTGCTGGTCCGAAATAAGCATAGTCTGAATGGAAC AAAAACGTTACACATGTAAACAGACCCAAAATGATGAAAACTAAACCAAC AGCCTCGATGATCTTATATGGTGGAGTTTGTGGCTTCATTTtatgatgtt ttattttgattttctaaatattAAAGAGAATATTTACAtttgaccataaa aaatttattacagAGTTTTCATTCCCTCAAAAGAAAATGGTTAACCGAAA CTATCCGTCGTAAAGTTTTGTACCACCTCAGATCTGCTGCTCCTTAGTAT AGAGGTTTCTGACAAAACAGTCGAGTATTCATTGAGTAAATGCCCTCCTG AATCCCAAACTTCAGATTAATGACCCCTAGAGTAGCTGTATCCAACCATT GAATTCAAGaaattgttaaccggttactttttcgaagcgggctacacgac tttttgcgcaatgcaattggttcttttcgcatgacgagagccctacattg tccagagttgcccgtcgttaggaaaattcattgtgacgtcactttttcaa aggaaaatgaacaatgcgttgacatcatttctctcattttttatttcgga cgtcagaaattatagcaattttttatctcttttcgcttgttttttctgct ttatttcgctattcttcctggataaagcgctaaaaatccatcaaagctga aggaaacggttaacaaatacaataatggccggtttttttcgggctgtact gaaaatattgccctcggtcaacgtaacaacctcgcaagctcggtcgttac ttgacctcgggcaatatttctcagtacagccctcactaaccggtcattat tgtattaggaAAACCTGGGAACATTCTATTTACTGCCGAATAATTCAGAC TATGTTTCTGAAATACTGAAATGTTCTGAGTTTCGATAACTTGACACAAA ACTTGACAACTCTTTCAATAAGAAGGAAATTGTAAATTAGCTGTTGAGTT TGTTAGTATATTCCTCACACAAGAAAAATTACATGTGACATTAACAGATC CATTTCTCAATTTTGTAATACccgaaaattttatttcatctcATACAAGC CTATCGACCGTTCTAAGTCATGTTTGATCAAAAGTGTTGTTGcattattt ttctgttttcttgtCTCTGAGCTCATGTTTGTTTGTACTTGCTGAAATGA CTACTGAACTTTTTTACAAGATGTTGAGTAATATAAAGACAGGCTACTGT TTAGACCAATCAGAGCGCGTCTTGCAAGAAACCGGAATTCAAGAAAATGG TATGACCACACATGACAACTAAATAACGCAATAATGCTTCTATTATTaca aaaagcaaagaaaatagGATGTAGCAAGGTGTAATGCAATAAGGCTTGTC TTATACAACCAATGATATCCTTTTATAAGAATTAGGTAAATTTCATTTGA TTAGTGTggctttttttctgaaaagttaACCAAAAAAAGGGGGTTTTAAT CATGTCTTACTTTTATCTTACTTTTATCATGCGCCAGTTTGGGCTTACTT TAAGTTCAATATTTCCAAGAATAAAGCTCTTGTCTGGCTTTTTAACTTGG GGTACTTTGTGATGAATTGAAAGCCTGCCGGCCGTTTTTGTATAATTTCG CCTTGTAAGCGTCAACAAACACCTCCACTCGTTACTTTATCTTCGATAAA AACGGTGAAAAGTCTAGTCCTGACTGAAGAAAATGCCCTGAAAGTCACAT CACCATAGCAAGACTACGCTAGATTCTCGTCCCCATCGAAAGACCTGCAG CAGCTAACATTTGAATAATCTGAAAACACAATGATTATAAGAATACATGT TTTAGGTCAATTTTCTAAGTGCCCTAATGTTGTCATGTTTACACACAACA CTGAAATTTGTTTTCGCAATACGTCAGGTTATCGTTCCATATTTTTCCCT AAACCCTTTCAATAGGTCATATTACAAATAGCTATTGCAAAAACCCTCAT ACCTACGAAATGTCAGAactgaaatttttaacaaaagaaaagtgtatcAT CTTTCAAGAGCTTTCTGCTGGAACGTCAGGAATTTAGACCCCGTCAGTAG AACCTTAATGTATCAATcctcaaaaaaatgtatttgcCACTGGTGGTCTG ATTTCCCAAATGGCAcacaacgttcatttaacgtcaTTTTAACGTTAGAA TCATTCACTTTTTGTGCCAACTGGAGAGAGTTCGAGGTGAAAACTAATCA AAAATCTTGCTCTAACACTTTATTGATATACTGTTGGCGAGAGAGCCAAA TTACACCTACACACCCTTCTCATAACCTTATAAAGTAACACAATTGTAAC TTTTTGTTGGAAAAATTGATCTTCTCATCTCTTGACGTGATATAGAGAAT TTTCGAAAGTCCTTACGCgtaaaataatttctttctcgagatttctaagc caatcaaaatacgaGCACAAAAAGCTGTGCCTGCTAGGTCTCTCCTGGCG ACCAAACCCGTTGTTAAAGCCATCGCCACCATAAAATATCAGAAAGATTG GATTCAGTCAAAGGATTTGACAAACTGGTATGGATTTATTCATGTCCATA ATCATAACGATCTTTGATATCATCAGAAACTTGATAGGGATAACAAATGA ATACAATTATAGAATCCTTCTCTCCTCGTGGTGCGATTTCAATCCCCTCC CCTCATTGTccttaatttagaaaaataccAGTATCCTGGCCCCGATACAc ttgaaaatccttttccaCCATTAACTTCATATCTTCAGAGTTTCGAAACA CCTATACAATGTTCAAAATTACCTATAATAACTCTAAGCACAAGATGATG TTATagcttgaaaaaggtttatgTAATTGTATTACATTTTATCATCGGta gatattttttaaattttgaaaattctttataAAGTGAAATCATCTTTATG AAACTTTTATTTGTGTACTGTAACTATGAATATACATATATCACATGGGT TTATCACAGAGAATTTTGTCAAAAGACGGTCtgtgatacacgcttttttt tttataagaatacactttataagaatgcccatgatgaaaatggccaaaaa actaagaatatgctaagaatatcaccatcatggaattttgctactcaagc taagaatgccattttaagagcatttttaattataaattatcaattatccc caagttaggctcacttcttttacaaaagtgccattttatgcttgagacgt atgtactaaatgttaaatctagtatgaattaggatcctaacctaagaatg tgctgtaagaatattttaggatgtttttcccaaaaaagttaggaatatcc atgatgaaatgaatttacaccattcttataaaaaaaaagtgtgtagaAGG GGGTGTATTCATGATATATTCATTAAAGTATTTATGTTTACGAAAATATC CCGATTTTTGACAGTAGTGGAAGATTTCTTATATGACGCACAATTCATGA CAAATAACTTTGAAGTTTTAGTAATTTGATCAAGGTGAAAATTCTCTGTC AAGAGAATTAAGTTAAAATCACGCTTAAAGTTAATTTAGGAAACTGGTAA TTGTCGTAAGTGCCTTATCGGTCCCTtttataaaatgttcttaaaacttg ttcttaactttttggccatcaaagccttatgtccttatatagtttgttcc ttataaaaaacgtgtatgataaTACATTCGTCAATAAATTACCTAATCAT CGTTAATAGTCTTTCAGCAGCTGTGTAGTTAGTTAAGTTAAGTGCTTTTT TCCTCAATGTAGTTATAAAAATAGCGCCAAGAAGCTTTAATATAAACAGT GCACAACATTGAGTGTATAAACGATATCTGAAGACTTGGGAAATATTGGT CCAGAATGATTGGAACGATTTTGTTAGCAATACCTGGGTTTGTTTTATTA TGGGTTTTAATTACTTATGTGGAACATTTGATCAGTTTGAGGAAATATCC AAAAGGACCATTTCCTTTACCTTTGATCGGAAACATTTTGTTGTTGAGCA AAAAACCTTTTCTCGACTTCGATGAAATGAGCAAAACGTATGGTGATGTG TTCAGTATAAGCTTTGGTAAGATAGAGGATGATTTCAAATACAGTTCAAA TAACATGAAGAGAACCTTTTGATCATATTTGTGATCAGTTGGTCACAGCT CCTTTCTCTCTTTACATCACTAATGTCCTCTTCAGCCCAACTCACAAATG GTGGTCTTTTTTTGCTAAAACAGGAAAAGTCAACCCAAAATCTTCAGGGT TTCGGACCAAAATAGACCTTATcatagtttttgatttttctaaaaaagcg atgcattatgggattgtttcgggggcattacaatagaattccctcgagaa ATTCCTAAGAGACTTCTAATGTATTatccccgaaacaatcccacaatgca tcgtttatttagaaaaatcaaaaactccgataggATCTATTCGAGAAAAT CCAACAAAGGAAATCTTTGCAACTTTAGAAGTTCTTTAAATAAAAGCTGA ATAAAATCTTTCATACAGGAACTTTTcactctttttttctatttgttaGG GATGAACCGGGTGGTTATTTTGAATTCGTATGAAGGAATCAAGGAAGCCC TGATGACACGTGGAACTGACTTCGCAGGTCGACCCACTGATAGCATCCCT GCCAAGATTGCCAGCAGAAATTTCACCAGCCTTGGACATGGTGATTATTC CAAAAGTTGGGCATTTTTGAGGAAACTTTCTTACAAGGGGTTGCATGTTT ATGGTACAGGAATGAAAAAAATCGAAGATATTATTACAGAGGAAGTTGAC AAAATGTGCTCCATATTGTCTCAAGAAAATGGCCAGCCAACTTTGATCAC GTCCTTTATAGGTAAGTTCGAAGAAAATAGCCTTCTTGAAAATTTGTTCC ATGATGCATTTTTTCATGCGGAAACTTAAAATGCGAAAGGAAGATTTTGG AATACcctattggaactaattttcacgggaattaattttagcgttttatt TGAACCCgcgaaataaaaaattttccaattttaccgaaaaatttgaaaaa tccaagggaaaataaaagaaatttgtccaaaaaagagcaaaaccgcgaaa acttAAACctgcgaaatgcaatttttccgatttttttttcgaccgcgaat attagtccccgcgaaaattagttccaataaggtaataaATTAGTGATTAT TGACAGTTCTTTGAACTTTTACTAGGCAATTCTTTGGTCAACACCATTTG TCATCTTTGCTTCAACAAGACATACCATGCTGACGACCCAGAATTCAAAC ACATTATGAGTTTCAGCAAACTAATCGATGTGGGACTCAGTCCTGGACAA GCCATCGTCATATTTCCTTGGCTTCGATTCTTTCCAGATACAGAAAAATT CAAGAATTTGAAACTGGGCACCAAACAAAGAGACGATTTCACAAATAAGA TGTTCAACGAGCACATTGAATCATTCAATCCGGAGAATATCAGAGATCTA ACCGATAATCTTTTACATCTTTCGTTAGATAAAGAAATGTGGAAAGATGC TGGATTCGAAGAAGTCACTCAATCCCAGTTAGAATCTGTGGTCAACTCAA TCTTCTTTGCAGGGACTTTAACACAACTAGCCACATTTCAATGGTTCGTA GTATTTATCGTACAAAATCCTGCGTATCAAACTAAAATGTACCAAGAAAT TGTAAACAAATTTGGCCAAAAGCACCAAATTACCGCCGAAGATAAAGAAA ATCTACCTTACAGTGAGGCTGTTTTAAAAGAAACCAACAGATTAGGTTCA ATTGCACCTCTTGCCATACCACACAAAACGACCGTTGACACATCAATTGG AGGTCATCCAATCTCTAAGGGTACTAAAATTCTTCTCAACCTGTACAGCA TGCATCACGACCCTGCACACTGGGATGAACCAGAGAAATTCAAACCAGAA CGTTGGTTGAATGCTGATGGAAGTTTGAAGAAAGAAAAGCCCTCACATTA TTTTCCATTTGGTGCGGGAACTCGTGTTTGCCTTGGGGATAGAATGGcga aaatacaaatttttttgatcgTCACAAGGTTATTGGTCAACTTTGAAGTC TCTCTTGCTCCTGGAGAATCAATGCCCGGTTTGAAAGATGGAATTATGGG ATTGACATATTCTCCTGCAAGCAAATTCAAAATAGTTTTGACACCTAGGG ATGGGAAGAAGGTCAATTGAGGAAATTGGATGATTACAAAACTTTCAATA TTTATAAATGAACTTTACAATGAGTAAATTACGTACCAGAAAAGATTTTC CATAACTATATACAACTCGTCATAGCTGAAATGGGAGGAGAATGAAGGCC ATTATGCAAAAAGATGAGAGTAATGTCGTTGTTTGACGACGACTATTACA GTGTTTGCCTTGGAGAGCGAATGACCAAAATGCAATTATTCATGATGGTG ACCAATTTCTTTCGCAACTTTGAAGATTCATTGGGTCCGGGAGAAAAGTT ACCGGCTGCTAGACGGAATTTTTGGAATAACATTAAACCCACCTGTTTTT ACGACAGTGCTTAAGAGAAGAATACAAGGGAACTAACGCTTTATTGTGTA ATATTTACCGTATATATTGATTAATCATAGCTTGAAATCGAGGCAAAcaa atttctactttttcctAAGCGCTTTATGCACTTAAAAGACTTTACGATAT AGCGCTGTTGATTTACCAagatcaatagaccttttcataaattacgtcac ggacatcacttgcctcgttttgaaattattgccatggtgattaactccca gcggattttattaaaactactttctattcataaaaaaaggatttcgtgtc tcaagggacataatcaccatggtaattgtttgaatacgaggcaagtgatg ttcgtgaattaatttatgaaaagctcTATGGCAcccaacttttttttgtt tactgagACGGACCACCAGATTGTGGTGGTCTTGAAAATATATATTGGCA ACCTGTTATTTATCTTAGTTTCCATTCTAAATTANAGTTGTTCTTGAAAA TATATATTGGCAACCTGTTATTTATCTTAGTTTCCATTCTAAATTACACT TAGTAGAATATCAGGATTATACAAGTAACATATTTCGACGAAAAAGGGGA AAAAGCATATTCCATCCATCAGAGTTTTGAAATAgcatttttcaatttgt tttgaatttttagtgGTAAAGGATGAGCCACTTTTCAAGCTTTGTAACTT TTACatcttacagtatgtggccccaaaaacggcgatcaaatttgaaattt ctctcaaatctagaggaaaagagattttacaaaaatttttgctgcatgaa aacttttaacatctctactttatttcctggaagtcctggaagttcttttt caaaattttaaatttcaacaatatttttcaatcgcttaaagacaggtagc ttttttctaatggcccccaaaacggaggtttgaaattttagcggtttctc gagatatctttaagatatgaatacaaaattttgaccatagttttgaaata tgatttagagggttttgggtataaatttatttgataaaattttacagTAC ACAACTgattgtcaaaatgcaggtttagggcccccaaaacggaggtgtag ttaaaatcaaattattaagcccagtggtaatagggggaaaaactatgaac atgtttatgacccgatggatgtaaaatttatgatttttatgaaatatttt aagattttcgatattgcaaagtccaaactgaaaatttagaaattttcaaa atgataattttgatttaaaaacgtcttaatcaagtgtttgaaaacaaatc tcttttgaaaatagttccattcatttatggaataagctgtgaaaatttta gaaaaaaagcttaactgaaactgaaaatattaagctttaaagttattttt cacctatattttgcaaaaaaatgacagaatttgccgtttttgctgattca gcgaaaaattttatataaaatgttaattttttgttataaactattaactc aaggtgataggaatagaattccaagatttttcgctttttctcatatttag aatcttcggttttgtcaatgctgattctagggctccaaaatactggttga ccttcaagatgctatatcttttacccagcctctaaagtcgcagatgtatt tgcattatctgaacggcattaggtgtagaaagttttcTATACCTCGTtgt cataacttattttcaatatccaaggagctagagtgagttatatgcaattt ttatctaattttggtgctAAAATAtatcctttagacgcaaatatgttatt ttgaatctgtctcaaaccagcaaaaacatgctgatttttaagcataacca tcattctttcaaaataaacaaaaatcgtttaattctgataaatctacaag tcagaatcttcattttaatgaaaacctccgttttgggggccgtctccgtt ttgggggccgtatACTGTAGTTGTTTTTGCTATTTACACTCTCAAATAAG TATTTGTaatttagcttcagttttctaTAATTATTAAAAGTGTACAAGGA TTATTCAGTTTTTCAGGTTGGTGGTTTGTTGTGCTTTACGGGCACTTTCA TTCaaggtaagaaatatttttttctattttgattcCAACTAAAGACTTTT TGCTTTTCTATTTTAGTATCGACAGACTTCTTAAGAAACTTGATTACTCT AGTCTCATTGTGTTTGAGTCAACCTCTCCAACACCCTTTTTATGAATACA ACAACATCACTCCTGCTCAAgactactctgtaccagagtgtatctcacga ttatcgtagcgtagtcctctacggcaatgaattttgaaattagccgtaga tgttgggtttgtgtacagacaagctCAAGACCGTCNGCAACATCACTCCT GCTCAAAAAAGTACCCAGCAATATAAAAcctttcgaaaaaattttgacac tgTTTTTAGACTAATAACATAGCATAATAATCAACAATTTTGTCACTCTC AATATTGCGTGTGTTGACTAAATTTTTTGGAACGGttaaaaaacctgttt taggtTAACGTGAGAAAACCTGGTTAGTTTTTCATGACTGCCAGACTGCT GCCTAATAACTTGACCCTCTACAACAGGCTCAATCTTACAAAGATTGTCT GACAAAAAAAAACCTGTCCTGACTTTCAGCACAGGAAAATTGAATGTACG GGTGGAAAATTGAATGggtagaccttttgctagttaggatgtcatgttga ataactTATTAAAGCAGAAAGATCGCTAATGGTCGGCATAAATATAGAAC CTACCCTCTAACACTAAATctaaattacacgtttttttatttataagaac aaactatatgagaacataaagcttcgatggctaaaatcttaagaacatcc gaaggctttaaaaaatttggatgttcttataaaaaaacgtgtattgtttA ACAAGTTTATGAACTACATACTCCATTCACGCCAAAACAAGCAAGATTGG TTTAATGCACGTCTTGATGAACAAAAGTCGTGAGTTAGCGCACAACTCTA TATTGACGTCATCTTAAATAACATTCGTGCTTTACATCATAATTAGGACA TATTACATCATAATTGATATTGTTATAAGAGACTTTTcaaattacaagaa aaatcttgaCATCTCATTTAGCAAGCTTGACCAGATTACCACATTTGATC GCAGACAAGTTTGTACATGGGCTATGGAAGTGATAGAAATCTTACCTCTT ATTCTTATTTCTTATGACAATAGAAGAACTCTGGACTTCTGGGCTAAAGA TATAATACAatctcaatctttttttttgaaaaagaatatcGTTGCTGAAA TcgtttgcaaattattttttcgcGAGGCAatacaaaacaaaagttttaag CCTGAAGGATCAGACCCATGCTTGATTTCTACTATTGGTGTTATTGGAGA TGGCTCAACAAATAGAATTTCTACATAATATCATTAGTCTTTGGGAGATA TAATGTTGAAACTACTTTTGAGTTTTCGTTCTTTAAACCATACCCACAAG AAcgatgtcaaaaaaaaagttcattCCTACAGAAAATTTTACCTCACCTA TAATTACCATTTACATTTCATAGATTGGAAAAAACGTTAGAATCTCaaca caacaaaaacaaaacgatGAAAGGTGTTtggcttgaaaaaaaagaattga catTTCGTCATGATATTCCTGAAGATTTCCCGGAAGATGAAGTCTTAGTC AAAGTGTTACGTTCTGGTATCTGTAATACAGATATTGAGTTGATGAAAGG TTACTATCCATACACTGGCATTATTGGTCATGAGTTTGTAGGTATGTACA TTATTATCCATATTAAGAAAACAACCAACTTAGGGTTCCAATACTGGATG CTAAATATTGGAAGAATTTTCTTTCCCCAAAATCCAACATTACGAcacat ttttctgattttttctttgaattcaaGGAAGATATTggattttcataaat tttgtcACAAAAGTTTCTCACTTTTCACACCCTTACATTTCCCCTTCTCA CCTCCCTTACAGTGTCTTTTGTGAAGCCTTCGAAACCTTTAAAACTTTAC CCTTAAGGGCTGTATCTAGGGTTGATATCCTGACAGGCAGTGGCGTGGTG ACAGGGGGCTGTGCTCCCCTAGCAccggcagattttttttggaCACGCCA AAATACAAAGGGCGCAAAAATACGCCCTCTGATACGCCCCTTTtctttta caccttagatatggtttttttttggccaaaaagagagaaaatacctcaaa attttcgtgctCATTTCGCTCACGTAATCTttacaaaatgataaaattca TAATATTCGAAATTAGCCTTCCCAGTTTGCCCCACTTCTGACAAGAGCAA CCTCCTttttaggctacgtcatatcttccttcgtttcgagcgtaaaactc ctactcttcgggctatgagcactgctcttgttttgaatattgaaattctc cagataaatcgcatgcgcactgaggttttaatgaaacaatagagagtttc gaaacctaagccaatcagctgtgatttaaacattcttttatttaaaatct ctattgataaacatcttttctgaatgttgtctattacgtttaaacctatt aataagcaattcccggtgggggtcactagtgaccgcctatagcagtgcct atagaccaagagtaaggcctaaaagcctggatctgtctattgtgtagact acctccttttattattatttacatatagacgatatcggctttccgaattc tccccgaatgattacccatgatgcattgtgcaaaaaaattcacggacgat attgatGACTATaccaatgcatcatgggtaatcattcggggagaattcgg aaagccgatatcgtctattgttgaTCTTTGCATTGTATATGAAGCGGAAG TATGATCGTGTGTTAACCCAGGGGGTCACTAGATCTTTAAAGAGGCTCCT TTAACTTTAACCCttttcatactaggcttttagggggagctgttcctgta ccaccccttaacttttgatctagttggtctttttggatgaaacttggcac acaagatccttgtcatatTAGGCAACTTTTGACAAGTTCTTGGTCGAGAA GGTATGCCTTTATGGTCGAGGAGTTCCAATCGAAATGAGTcaataaacaa atttttaatcattgaaaaaaaaccttatttCGTTTTTTCAAAGGTGAAGT CGTTGACAAGACAAGCGAGTTGTACAGTAAGAGAGTGGTAGGTGAAATTA ATTGTTGTTGTCATCAATGTCGCTTTTGTTTGGAAGGGATGAAAAGTCAT TGCTCGAAACGTACAGTCATGGGTATAATCAATCGGTCAGGTATGTTTTC ATTGGAGTGCACTGTCACTGATCtttaaatttaacatttttagttggTTG AATAAAACTTTTTCCGCACGGTGAGCTATTCGAAAATTGAAATTCGTTCT TATGAGACCTACTGATGTTGTAACcactgaaattttcaaatatcgAAAAT TAAAGTGCATTTCGTTTTGGCACAATAAAACTGATCCAGGGCTGTATTTG TTATGGTTTTTCACCGACCCTTCGAAGGTAGTCGAAACGATGGCTTTTAC TGGTTAGGCTATACTTTCTAGATAGAGACATTATTCCCATTAAATGGTGT CTTATCTACCCTTTTTACATTTAAACGCCTACTCTATCAACTTAAGAGGT GCTTCTACTTCTACAATAAAAAAGATTGTCTTCGATCAACCAACAcgccc gattttgaaaaaaacacttCACCAATAATTTAATTATTATTTaaaagaga ttcgaattatatgTTAGGTACACATGCAGAATACTTAACACTGCCTGCTG AAAATCTTCTTTCCGTTCCTGAAAACGTTTCCAATAGCGACGCTTGTTTT GTAGAACCACTGGCTGCCACTCTTGAAATACAAGAGCAATTGACATTTAC TGAAAAACATAAAGTCGCTATAATTGGGGATGGAAAATTGGGTCTGTTAA TTGCCAAAACGATAGCGTTAACACCATGTCAGTTAACAGTCTTTGGTCGC CATCAAGAGAAACTTGACATTTTGAAGTAtgataatttacagaccagaat aggtgTTGAATCTAGTGATGCGTCCGCATTTGATATTGTGGTCGAATGCA CTGGTAACGAGGAGGCCTTTAACCAGGCTATTAATTTATTACGCCCTAGA GGTACTTTAGTTATGAAAAGCACCCATGAAGGGAACACAAAGATCAATGC AGCCGCTGTAGTTGTTAAAGAATTAACTCTCATTGGCTCTCGTTGCGGAC CCTTTGATAAAGCACTTGCTCTTTTGGAACAGAGGAAAATTGATTTGACT GGTTTACTTCAGAAGACTTTTCCGTTGACGGAAGCGATGGACGCTTTTGA GCATGCGCAAAGGAAAGGTGTAATGAAAGTTCAATTAGTCAATGAGTGAT GGAGCATGAAAGGCCGGGGGGGgtagtcaggcaaattgaccgacggttAT GATTAGaaatgcactataagggttggctTTTGATCAATGCAATGTAAGGG CATGAATTTCACTGATCTTTTGTTGCCCTGTAAGGATGCAATTttgaagc caattttttcgccgcacatactgTCAGTTGGTAGACCCACTACCCCCTCC TCTggatatataaaaaaagaaaatgacaatCAATCTAAAAATAATGCTGA GTAACTGATTTCCTTCCAAAGTTCCTTTTGAATAAAGCACCAGAAGATGC GATCCAGACAATAATTTTGTATCGGTGTTGTGTTTCAAAATCGCCTGTTG GGTACATGTCTTCACAAAACCATTCattaattttatgttttaacattttc aaatagcAATAGAATTTTATACGACCTACTTTAATgtgataaattttcgc gggggtTGAATTTCGTGGATTCCCTAGCCTCACAGAAGCGCTAATAAcgc gtatttcaacaaccactATGCTTAATTTGgcaataaaaagacacaaaatc atgaaaatattgtctTCTAAGAATGTCATCCGCAAAATTcagtccccgcg aaatcttaaaatttcgcggatgggtCCAATTATACTAGTTTTAATCCCcg tgaaaatttatcccattaaagtatatctTATATATTTAACCTTAAACGCA TTGTAACCAATAATATTTTTATACGAC

Coding sequence (CDS) from alignment at sc0000093:460322..477348+

>TCONS_00009365 ID=TCONS_00009365|Name=TCONS_00009365|organism=Clytia hemisphaerica|type=CDS|length=2862bp|location=Sequence derived from alignment at sc0000093:460322..477348+ (Clytia hemisphaerica)
atGAAAGGTGTTtggcttgaaaaaaaagaattgacatTTCGTCATGATAT
TCCTGAAGATTTCCCGGAAGATGAAGTCTTAGTCAAAGTGTTACGTTCTG
GTATCTGTAATACAGATATTGAGTTGATGAAAGGTTACTATCCATACACT
GGCATTATTGGTCATGAGTTTGTAGGTGAAGTCGTTGACAAGACAAGCGA
GTTGTACAGTAAGAGAGTGGTAGGTGAAATTAATTGTTGTTGTCATCAAT
GTCGCTTTTGTTTGGAAGGGATGAAAAGTCATTGCTCGAAACGTACAGTC
ATGGGTATAATCAATCGGTCAGGTACACATGCAGAATACTTAACACTGCC
TGCTGAAAATCTTCTTTCCGTTCCTGAAAACGTTTCCAATAGCGACGCTT
GTTTTGTAGAACCACTGGCTGCCACTCTTGAAATACAAGAGCAATTGACA
TTTACTGAAAAACATAAAGTCGCTATAATTGGGGATGGAAAATTGGGTCT
GTTAATTGCCAAAACGATAGCGTTAACACCATGTCAGTTAACAGTCTTTG
GTCGCCATCAAGAGAAACTTGACATTTTGAAGTAtgataatttacagacc
agaataggtgTTGAATCTAGTGATGCGTCCGCATTTGATATTGTGGTCGA
ATGCACTGGTAACGAGGAGGCCTTTAACCAGGCTATTAATTTATTACGCC
CTAGAGGTACTTTAGTTATGAAAAGCACCCATGAAGGGAACACAAAGATC
AATGCAGCCGCTGTAGTTGTTAAAGAATTAACTCTCATTGGCTCTCGTTG
CGGACCCTTTGATAAAGCACTTGCTCTTTTGGAACAGAGGAAAATTGATT
TGACTGGTTTACTTCAGAAGACTTTTCCGTTGACGGAAGCGATGGACGCT
TTTGAGCATGCGCAAAGGAAAGGTGTAATGAAAGTTCAATTAGTCAATGA
GTGAatGAAAGGTGTTtggcttgaaaaaaaagaattgacatTTCGTCATG
ATATTCCTGAAGATTTCCCGGAAGATGAAGTCTTAGTCAAAGTGTTACGT
TCTGGTATCTGTAATACAGATATTGAGTTGATGAAAGGTTACTATCCATA
CACTGGCATTATTGGTCATGAGTTTGTAGGTGAAGTCGTTGACAAGACAA
GCGAGTTGTACAGTAAGAGAGTGGTAGGTGAAATTAATTGTTGTTGTCAT
CAATGTCGCTTTTGTTTGGAAGGGATGAAAAGTCATTGCTCGAAACGTAC
AGTCATGGGTATAATCAATCGGTCAGGTACACATGCAGAATACTTAACAC
TGCCTGCTGAAAATCTTCTTTCCGTTCCTGAAAACGTTTCCAATAGCGAC
GCTTGTTTTGTAGAACCACTGGCTGCCACTCTTGAAATACAAGAGCAATT
GACATTTACTGAAAAACATAAAGTCGCTATAATTGGGGATGGAAAATTGG
GTCTGTTAATTGCCAAAACGATAGCGTTAACACCATGTCAGTTAACAGTC
TTTGGTCGCCATCAAGAGAAACTTGACATTTTGAAGTAtgataatttaca
gaccagaataggtgTTGAATCTAGTGATGCGTCCGCATTTGATATTGTGG
TCGAATGCACTGGTAACGAGGAGGCCTTTAACCAGGCTATTAATTTATTA
CGCCCTAGAGGTACTTTAGTTATGAAAAGCACCCATGAAGGGAACACAAA
GATCAATGCAGCCGCTGTAGTTGTTAAAGAATTAACTCTCATTGGCTCTC
GTTGCGGACCCTTTGATAAAGCACTTGCTCTTTTGGAACAGAGGAAAATT
GATTTGACTGGTTTACTTCAGAAGACTTTTCCGTTGACGGAAGCGATGGA
CGCTTTTGAGCATGCGCAAAGGAAAGGTGTAATGAAAGTTCAATTAGTCA
ATGAGTGAatGAAAGGTGTTtggcttgaaaaaaaagaattgacatTTCGT
CATGATATTCCTGAAGATTTCCCGGAAGATGAAGTCTTAGTCAAAGTGTT
ACGTTCTGGTATCTGTAATACAGATATTGAGTTGATGAAAGGTTACTATC
CATACACTGGCATTATTGGTCATGAGTTTGTAGGTGAAGTCGTTGACAAG
ACAAGCGAGTTGTACAGTAAGAGAGTGGTAGGTGAAATTAATTGTTGTTG
TCATCAATGTCGCTTTTGTTTGGAAGGGATGAAAAGTCATTGCTCGAAAC
GTACAGTCATGGGTATAATCAATCGGTCAGGTACACATGCAGAATACTTA
ACACTGCCTGCTGAAAATCTTCTTTCCGTTCCTGAAAACGTTTCCAATAG
CGACGCTTGTTTTGTAGAACCACTGGCTGCCACTCTTGAAATACAAGAGC
AATTGACATTTACTGAAAAACATAAAGTCGCTATAATTGGGGATGGAAAA
TTGGGTCTGTTAATTGCCAAAACGATAGCGTTAACACCATGTCAGTTAAC
AGTCTTTGGTCGCCATCAAGAGAAACTTGACATTTTGAAGTAtgataatt
tacagaccagaataggtgTTGAATCTAGTGATGCGTCCGCATTTGATATT
GTGGTCGAATGCACTGGTAACGAGGAGGCCTTTAACCAGGCTATTAATTT
ATTACGCCCTAGAGGTACTTTAGTTATGAAAAGCACCCATGAAGGGAACA
CAAAGATCAATGCAGCCGCTGTAGTTGTTAAAGAATTAACTCTCATTGGC
TCTCGTTGCGGACCCTTTGATAAAGCACTTGCTCTTTTGGAACAGAGGAA
AATTGATTTGACTGGTTTACTTCAGAAGACTTTTCCGTTGACGGAAGCGA
TGGACGCTTTTGAGCATGCGCAAAGGAAAGGTGTAATGAAAGTTCAATTA
GTCAATGAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005247XLOC_005247Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009365-proteinTCONS_00009365-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009365-exon-sc0000093-1491911889:460322..460381TCONS_00009365-exon-sc0000093-1491911889:460322..460381Clytia hemisphaericaexon
TCONS_00009365-exon-sc0000093-1510915933:460322..460381TCONS_00009365-exon-sc0000093-1510915933:460322..460381Clytia hemisphaericaexon
TCONS_00009365-exon-sc0000093-1575043694:460322..460381TCONS_00009365-exon-sc0000093-1575043694:460322..460381Clytia hemisphaericaexon
TCONS_00009365-exon-sc0000093-1491911889:473745..473962TCONS_00009365-exon-sc0000093-1491911889:473745..473962Clytia hemisphaericaexon
TCONS_00009365-exon-sc0000093-1510915933:473745..473962TCONS_00009365-exon-sc0000093-1510915933:473745..473962Clytia hemisphaericaexon
TCONS_00009365-exon-sc0000093-1575043694:473745..473962TCONS_00009365-exon-sc0000093-1575043694:473745..473962Clytia hemisphaericaexon
TCONS_00009365-exon-sc0000093-1491911889:475365..475511TCONS_00009365-exon-sc0000093-1491911889:475365..475511Clytia hemisphaericaexon
TCONS_00009365-exon-sc0000093-1510915933:475365..475511TCONS_00009365-exon-sc0000093-1510915933:475365..475511Clytia hemisphaericaexon
TCONS_00009365-exon-sc0000093-1575043694:475365..475511TCONS_00009365-exon-sc0000093-1575043694:475365..475511Clytia hemisphaericaexon
TCONS_00009365-exon-sc0000093-1491911889:475989..477348TCONS_00009365-exon-sc0000093-1491911889:475989..477348Clytia hemisphaericaexon
TCONS_00009365-exon-sc0000093-1510915933:475989..477348TCONS_00009365-exon-sc0000093-1510915933:475989..477348Clytia hemisphaericaexon
TCONS_00009365-exon-sc0000093-1575043694:475989..477348TCONS_00009365-exon-sc0000093-1575043694:475989..477348Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:460322..477348 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.95538 3.68794 1.04502 0.573538 14.2378 11.4428 4.10973 4.71452 3.07311 3.26611 5.24559 3.19415 3.3744 3.31174 6.16123 11.5796 4.47827 6.13165 2.08191 3.13012 2.57357 3.28856 6.02516 5.04986 1.30514 1.20795 3.87668 1.41653 3.02327 2.67654
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013149ADH_C
IPR013154ADH_N
IPR011032GroES-like
IPR016040NAD(P)-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009365 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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