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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009346 ID=TCONS_00009346|Name=TCONS_00009346|organism=Clytia hemisphaerica|type=transcript|length=284bp
TTTGCACTTCATTAACGAGAAAGCGTTCACAGGGAGAAGAACCGGGATTA
CCATAGCATATAAAAATGCAGTTCATAAGCTGTCATTTAGTCATTATTGC
ACTGTTTTGCTGTTTTGTCAGTCAGTATCAGATCGAAGGAGCACCTGTGG
TTCCTAAGCGACGGTGGATTTCTCTGAAACTAATAGAATACGCAGCAGCA
ACCGAGAGAGATCATGAATTAACAGATTCTCAACGATTATTTAAAGAGAA
ACTCCGAAGTTTGATAAAGACCAAAATGAACGTC Run BLAST on NCBI transcript from alignment at sc0000093:121681..123111+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009346 ID=TCONS_00009346|Name=TCONS_00009346|organism=Clytia hemisphaerica|type=transcript|length=1431bp|location=Sequence derived from alignment at sc0000093:121681..123111+ (Clytia hemisphaerica)
TTTGCACTTCATTAACGAGAAAGCGTTCACAGGGAGAAGAACCGGGATTA
CCATAGCATATAAAAATGCAGTTCATAAGCTGTCATTTAGTCATTATTGC
ACTGTTTTGCTGTTTTGTCAGTCAGTATCAGATCGAAGGAGCACCTGTGG
TTCCTAAGCGACGGTGGATTTCTCTGAAACTAATAGAATACGCAGCAGCA
ACCGAGAGAGATCATGAATTAACAGATTGTAAGGATTTTTCTAGTTTaca
ttttcttagaaaatttttttatttcagccaATTCGTTTCATTTTATTCAT
CTGTCAGATGAGCactgcttttttttataatttgtttgtttttcattttN
ATTCAGCCAATTCGTTTCATTTTAGTCATCTGTCAGATGAGCACTGTTTT
tataatttgtttgtttttcatttttcaaccaatacAACTTCACCTTTCTT
AACGGTATAAAAAGGATTCGGTTTGACATTACGAGAGCTGAATGATATAG
CGTGACGTCACGTGATTCCGCATTCGCCTGGTAAACACCGATTCCttttt
atgtaagattataaCACAGCGGAATATAACAAAAATATcaggttatctga
tattccaaaGGCGTATTAGTGGAGCgagccaatttcccatcggaaaGGAA
TGATAGTTGGCATCACATATATTGCCCTGACGCAAGCCTCTGGAAATATT
CCGCAGAAAAATCCGTGACGTGGTTTACCGAAATTCTGTAATCTCAACCT
TCCAGGATTTAAGAATTTTTCCGACTTTTTCAGAGCTTTAGTGAGTCGCA
ATAAAAGTCTCTACATTGACTGCCAGATATGACACGGGAATAAAACCTCC
CAGGGAGATACTACgattgccgaccgacgggggtgctccgctgaggttca
aaaaatggaccctacgtgggactcgttatatcaaaattttgccgaaattt
gcaaaaaagtgaCCTTGAATGGGACCGAAAtgccaaaattttctactttt
tccccaataaaaaaaagacaccctacgagagactgatttttctatttggt
gtttttgcgaccctaccctggactcgtggaggttaaaaaaggtaccctga
ccagcggtgCATCCCTGCAACCCAATTTGCCctagtaacccccccccccc
ccaaaNaaattaaaaaaaaagacaccCTACGAGAgactaatttttctatt
ttgatctttttgcaACCCTACTTGGGACTCGTGAAGgtaaaaaaaggtac
cctgaccagcggcgcatccATGTAACCCAATCTATGCCACACTGAGTATT
GAAGCAATGCCAAAGGGTGGTCTATGTATAGATTAAGAATCACTTTGACA
CTAATCTTGTTTTTCTACTTTGCAGCTCAACGATTATTTAAAGAGAAACT
CCGAAGTTTGATAAAGACCAAAATGAACGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009346-exon-sc0000093-1491911889:121681..121908 | TCONS_00009346-exon-sc0000093-1491911889:121681..121908 | Clytia hemisphaerica | exon |
| TCONS_00009346-exon-sc0000093-1510915933:121681..121908 | TCONS_00009346-exon-sc0000093-1510915933:121681..121908 | Clytia hemisphaerica | exon |
| TCONS_00009346-exon-sc0000093-1575043694:121681..121908 | TCONS_00009346-exon-sc0000093-1575043694:121681..121908 | Clytia hemisphaerica | exon |
| TCONS_00009346-exon-sc0000093-1491911889:123056..123111 | TCONS_00009346-exon-sc0000093-1491911889:123056..123111 | Clytia hemisphaerica | exon |
| TCONS_00009346-exon-sc0000093-1510915933:123056..123111 | TCONS_00009346-exon-sc0000093-1510915933:123056..123111 | Clytia hemisphaerica | exon |
| TCONS_00009346-exon-sc0000093-1575043694:123056..123111 | TCONS_00009346-exon-sc0000093-1575043694:123056..123111 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000093 | supercontig | sc0000093:121681..123111 + |
Blast
The following BLAST results are available for this feature:
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