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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009322 ID=TCONS_00009322|Name=TCONS_00009322|organism=Clytia hemisphaerica|type=transcript|length=1906bp
TggtttcatcaaaatctttaaaacagGCTCCAAATCCTTCTTGCCAACGT
GGGTCTTTAACAAATGAGATGCGAATAACTCGAATTCTTCTACGTTTGAT
AAGCAGCTTGAGCAAAAGCCTTCGTCTCCGTTGTGCAGAATAGTTAATGC
TGATTTCACGATTTTGTTTTGGATGTCAAATGTTGACTTGAAAAGTAAAC
ATTTAATCAATCGATTGAAAAGGATAAGGCGGTCTTCCCAATCTAAATAA
ACTATAGTGTCTGTCTTCACTACCACGCTGTATACGTAAGATACCAAAGC
GTTGAAGGCTTCGGTGTTTTCGTCTTTGATGGCAATAGGATCTTCTAACA
AAATACCGAACAATTTGAAAAGCTTTTCTGGGATTATTTGAACTGCACAT
TTGTGAAGCTTTTCAATTAATTGATTCTGTAATATATAAATTAACGATTC
ATCCATCTTCAGAATCTCTTTCAGACACCAATCAGCGAGTTTATCAGCTC
TTTTATTCTTATCAGGATGTGAAAACAGGTGAAAGACGATGTCTAACCAT
TTACTCGACTTTCTTTGAATGGACGCTCTAACAATCTCCTTTGTTTTCTC
CAATGAGTCATACCATGCTTCAGAATCCAAAGCATTGATAAAATTCTGGT
ATACAATGATCAGGTTATCGTAAAAGACGTCCAGACAACCCTCTTGCAAC
GTTTTTGGGATCAACGCTATCATCATTTGCAGGAAATATTGCTGATCATT
CTCACGGAGTTGACGGATGAATTGCGCTGATAAGATTTCTTTAACTGACC
AGTCATTCATCTGTAGCACGGATCTTTTGGTTACCACGTGTTCCATTAGC
TCCTGGTTTTCTCTTTTCAAGCACAGACGGTCATAAATGAATTTCGCAAA
TTCACTGTCTTCTAAGTAGCACATTTGAAGAATGGTTGCAATGTCCAGTG
AGAAATGTGCATTTGGAATACCTTCTGCCATTTGATGGTTCGTAAGAAGG
GTGAGTAACTTGCTGACCTCAACAGCTGCCTTTCCTGCAATGTCTTCAAT
TTCATATCCGACAATTCCTTTGTTGTAGGCATTCTTTAAAATCTCGATTA
TGACCCACATAAAATTGTGTCTGGTTCTCAAAGGATTTCTTGAATCTGAA
TATTTTCGTATGTCCTTCTCATTATACCTTTCTTCTTCCCCATTGGTCCA
TCTGATCGTTAATGCTGTCAACTTTGATTCGATCGCCTTCTCGAAGATGA
GGTAGTTTAGCGTGGCGCTTCCATTACACAGTTCATAGCCTTTCAAATTA
GTTTCTTTGATCCTTGGTAACCATAAGTCACTGATAAGCCAGTCCAAATC
ATCTGCTGTAATTTTGATCAAACCCAGTCTGTGCAATTCTTCTAACAACC
GGAAAAAAGAATACGTCTTCTTCCTGTTGTAGGGCTTTAACTTGCGATCA
GTTGATAATTTCTCCAAAAGCAGGAGGCCATCTGTTGCATCGTCTGGGAT
CGATTTGATGATGTCTTTCTTAAATTCTTCTTGTATTGGAAACTGGATTC
CTAGCCCCAATGGTGTTTTACAATAAGCCAGTCGAAAATACACATCTTCT
TTCTCTTCACTGTTCAACACAGAATCTTCGGATAAAATGTTTGACAAAAT
GAAGATTAGCCTCCATAAAGTTTCAATTGGGAAATTGAATAAATAATGAA
GACAGGAAATGAAAATTGTTCTGAGAAAAGTTTTGATACTTTCCACATCT
TCTTTGGACGTTATACAGATGGAAGCTTCTTCGATATCACCGAGGAGATT
ATGGACATGGTCGATATTGATTTCTTCAATTGCTCGGATCTTCTGCTTAC
TCTTCTTTCCTTGCTTCTTTTCAGTGTAGCAAAATTCTTTAACCAGCAGG
TCGACG Run BLAST on NCBI protein sequence of TCONS_00009322-protein >TCONS_00009322-protein ID=TCONS_00009322-protein|Name=TCONS_00009322-protein|organism=Clytia hemisphaerica|type=polypeptide|length=635bp
VDLLVKEFCYTEKKQGKKSKQKIRAIEEINIDHVHNLLGDIEEASICITS
KEDVESIKTFLRTIFISCLHYLFNFPIETLWRLIFILSNILSEDSVLNSE
EKEDVYFRLAYCKTPLGLGIQFPIQEEFKKDIIKSIPDDATDGLLLLEKL
STDRKLKPYNRKKTYSFFRLLEELHRLGLIKITADDLDWLISDLWLPRIK
ETNLKGYELCNGSATLNYLIFEKAIESKLTALTIRWTNGEEERYNEKDIR
KYSDSRNPLRTRHNFMWVIIEILKNAYNKGIVGYEIEDIAGKAAVEVSKL
LTLLTNHQMAEGIPNAHFSLDIATILQMCYLEDSEFAKFIYDRLCLKREN
QELMEHVVTKRSVLQMNDWSVKEILSAQFIRQLRENDQQYFLQMMIALIP
KTLQEGCLDVFYDNLIIVYQNFINALDSEAWYDSLEKTKEIVRASIQRKS
SKWLDIVFHLFSHPDKNKRADKLADWCLKEILKMDESLIYILQNQLIEKL
HKCAVQIIPEKLFKLFGILLEDPIAIKDENTEAFNALVSYVYSVVVKTDT
IVYLDWEDRLILFNRLIKCLLFKSTFDIQNKIVKSALTILHNGDEGFCSS
CLSNVEEFELFASHLLKTHVGKKDLEPVLKILMKP Run BLAST on NCBI transcript from alignment at sc0000091:452482..454387 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009322 ID=TCONS_00009322|Name=TCONS_00009322|organism=Clytia hemisphaerica|type=transcript|length=1906bp|location=Sequence derived from alignment at sc0000091:452482..454387 (Clytia hemisphaerica)
CGTCGACCTGCTGGTTAAAGAATTTTGCTACACTGAAAAGAAGCAAGGAA
AGAAGAGTAAGCAGAAGATCCGAGCAATTGAAGAAATCAATATCGACCAT
GTCCATAATCTCCTCGGTGATATCGAAGAAGCTTCCATCTGTATAACGTC
CAAAGAAGATGTGGAAAGTATCAAAACTTTTCTCAGAACAATTTTCATTT
CCTGTCTTCATTATTTATTCAATTTCCCAATTGAAACTTTATGGAGGCTA
ATCTTCATTTTGTCAAACATTTTATCCGAAGATTCTGTGTTGAACAGTGA
AGAGAAAGAAGATGTGTATTTTCGACTGGCTTATTGTAAAACACCATTGG
GGCTAGGAATCCAGTTTCCAATACAAGAAGAATTTAAGAAAGACATCATC
AAATCGATCCCAGACGATGCAACAGATGGCCTCCTGCTTTTGGAGAAATT
ATCAACTGATCGCAAGTTAAAGCCCTACAACAGGAAGAAGACGTATTCTT
TTTTCCGGTTGTTAGAAGAATTGCACAGACTGGGTTTGATCAAAATTACA
GCAGATGATTTGGACTGGCTTATCAGTGACTTATGGTTACCAAGGATCAA
AGAAACTAATTTGAAAGGCTATGAACTGTGTAATGGAAGCGCCACGCTAA
ACTACCTCATCTTCGAGAAGGCGATCGAATCAAAGTTGACAGCATTAACG
ATCAGATGGACCAATGGGGAAGAAGAAAGGTATAATGAGAAGGACATACG
AAAATATTCAGATTCAAGAAATCCTTTGAGAACCAGACACAATTTTATGT
GGGTCATAATCGAGATTTTAAAGAATGCCTACAACAAAGGAATTGTCGGA
TATGAAATTGAAGACATTGCAGGAAAGGCAGCTGTTGAGGTCAGCAAGTT
ACTCACCCTTCTTACGAACCATCAAATGGCAGAAGGTATTCCAAATGCAC
ATTTCTCACTGGACATTGCAACCATTCTTCAAATGTGCTACTTAGAAGAC
AGTGAATTTGCGAAATTCATTTATGACCGTCTGTGCTTGAAAAGAGAAAA
CCAGGAGCTAATGGAACACGTGGTAACCAAAAGATCCGTGCTACAGATGA
ATGACTGGTCAGTTAAAGAAATCTTATCAGCGCAATTCATCCGTCAACTC
CGTGAGAATGATCAGCAATATTTCCTGCAAATGATGATAGCGTTGATCCC
AAAAACGTTGCAAGAGGGTTGTCTGGACGTCTTTTACGATAACCTGATCA
TTGTATACCAGAATTTTATCAATGCTTTGGATTCTGAAGCATGGTATGAC
TCATTGGAGAAAACAAAGGAGATTGTTAGAGCGTCCATTCAAAGAAAGTC
GAGTAAATGGTTAGACATCGTCTTTCACCTGTTTTCACATCCTGATAAGA
ATAAAAGAGCTGATAAACTCGCTGATTGGTGTCTGAAAGAGATTCTGAAG
ATGGATGAATCGTTAATTTATATATTACAGAATCAATTAATTGAAAAGCT
TCACAAATGTGCAGTTCAAATAATCCCAGAAAAGCTTTTCAAATTGTTCG
GTATTTTGTTAGAAGATCCTATTGCCATCAAAGACGAAAACACCGAAGCC
TTCAACGCTTTGGTATCTTACGTATACAGCGTGGTAGTGAAGACAGACAC
TATAGTTTATTTAGATTGGGAAGACCGCCTTATCCTTTTCAATCGATTGA
TTAAATGTTTACTTTTCAAGTCAACATTTGACATCCAAAACAAAATCGTG
AAATCAGCATTAACTATTCTGCACAACGGAGACGAAGGCTTTTGCTCAAG
CTGCTTATCAAACGTAGAAGAATTCGAGTTATTCGCATCTCATTTGTTAA
AGACCCACGTTGGCAAGAAGGATTTGGAGCctgttttaaagattttgatg
aaaccA Coding sequence (CDS) from alignment at sc0000091:452482..454387 >TCONS_00009322 ID=TCONS_00009322|Name=TCONS_00009322|organism=Clytia hemisphaerica|type=CDS|length=1905bp|location=Sequence derived from alignment at sc0000091:452482..454387 (Clytia hemisphaerica)
GTCGACCTGCTGGTTAAAGAATTTTGCTACACTGAAAAGAAGCAAGGAAA
GAAGAGTAAGCAGAAGATCCGAGCAATTGAAGAAATCAATATCGACCATG
TCCATAATCTCCTCGGTGATATCGAAGAAGCTTCCATCTGTATAACGTCC
AAAGAAGATGTGGAAAGTATCAAAACTTTTCTCAGAACAATTTTCATTTC
CTGTCTTCATTATTTATTCAATTTCCCAATTGAAACTTTATGGAGGCTAA
TCTTCATTTTGTCAAACATTTTATCCGAAGATTCTGTGTTGAACAGTGAA
GAGAAAGAAGATGTGTATTTTCGACTGGCTTATTGTAAAACACCATTGGG
GCTAGGAATCCAGTTTCCAATACAAGAAGAATTTAAGAAAGACATCATCA
AATCGATCCCAGACGATGCAACAGATGGCCTCCTGCTTTTGGAGAAATTA
TCAACTGATCGCAAGTTAAAGCCCTACAACAGGAAGAAGACGTATTCTTT
TTTCCGGTTGTTAGAAGAATTGCACAGACTGGGTTTGATCAAAATTACAG
CAGATGATTTGGACTGGCTTATCAGTGACTTATGGTTACCAAGGATCAAA
GAAACTAATTTGAAAGGCTATGAACTGTGTAATGGAAGCGCCACGCTAAA
CTACCTCATCTTCGAGAAGGCGATCGAATCAAAGTTGACAGCATTAACGA
TCAGATGGACCAATGGGGAAGAAGAAAGGTATAATGAGAAGGACATACGA
AAATATTCAGATTCAAGAAATCCTTTGAGAACCAGACACAATTTTATGTG
GGTCATAATCGAGATTTTAAAGAATGCCTACAACAAAGGAATTGTCGGAT
ATGAAATTGAAGACATTGCAGGAAAGGCAGCTGTTGAGGTCAGCAAGTTA
CTCACCCTTCTTACGAACCATCAAATGGCAGAAGGTATTCCAAATGCACA
TTTCTCACTGGACATTGCAACCATTCTTCAAATGTGCTACTTAGAAGACA
GTGAATTTGCGAAATTCATTTATGACCGTCTGTGCTTGAAAAGAGAAAAC
CAGGAGCTAATGGAACACGTGGTAACCAAAAGATCCGTGCTACAGATGAA
TGACTGGTCAGTTAAAGAAATCTTATCAGCGCAATTCATCCGTCAACTCC
GTGAGAATGATCAGCAATATTTCCTGCAAATGATGATAGCGTTGATCCCA
AAAACGTTGCAAGAGGGTTGTCTGGACGTCTTTTACGATAACCTGATCAT
TGTATACCAGAATTTTATCAATGCTTTGGATTCTGAAGCATGGTATGACT
CATTGGAGAAAACAAAGGAGATTGTTAGAGCGTCCATTCAAAGAAAGTCG
AGTAAATGGTTAGACATCGTCTTTCACCTGTTTTCACATCCTGATAAGAA
TAAAAGAGCTGATAAACTCGCTGATTGGTGTCTGAAAGAGATTCTGAAGA
TGGATGAATCGTTAATTTATATATTACAGAATCAATTAATTGAAAAGCTT
CACAAATGTGCAGTTCAAATAATCCCAGAAAAGCTTTTCAAATTGTTCGG
TATTTTGTTAGAAGATCCTATTGCCATCAAAGACGAAAACACCGAAGCCT
TCAACGCTTTGGTATCTTACGTATACAGCGTGGTAGTGAAGACAGACACT
ATAGTTTATTTAGATTGGGAAGACCGCCTTATCCTTTTCAATCGATTGAT
TAAATGTTTACTTTTCAAGTCAACATTTGACATCCAAAACAAAATCGTGA
AATCAGCATTAACTATTCTGCACAACGGAGACGAAGGCTTTTGCTCAAGC
TGCTTATCAAACGTAGAAGAATTCGAGTTATTCGCATCTCATTTGTTAAA
GACCCACGTTGGCAAGAAGGATTTGGAGCctgttttaaagattttgatga
aaccA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00009322-exon-sc0000091-1491911889:452482..454387 | TCONS_00009322-exon-sc0000091-1491911889:452482..454387 | Clytia hemisphaerica | exon |
| TCONS_00009322-exon-sc0000091-1510915933:452482..454387 | TCONS_00009322-exon-sc0000091-1510915933:452482..454387 | Clytia hemisphaerica | exon |
| TCONS_00009322-exon-sc0000091-1575043694:452482..454387 | TCONS_00009322-exon-sc0000091-1575043694:452482..454387 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000091 | supercontig | sc0000091:452482..454387 . |
Blast
The following BLAST results are available for this feature:
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