TCONS_00009189 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009189
Unique NameTCONS_00009189
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1518

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009189 ID=TCONS_00009189|Name=TCONS_00009189|organism=Clytia hemisphaerica|type=transcript|length=1518bp
CGCATCGAAGCATCCAAAATGGCGGCGCCGATTTTCATCGCAACGTTGTG
TTTTATGTGGATAGTTTACATTTGGGAAACATACTTATCTTTCAGACAGT
ATAAAGTGTACCGTGACACTGATGATGTTCCAGAGGAGCTCGAAGACTAC
ATTGATGAGGAGACTTTTGAAAAGTCACGGAGTTACCAACTCGACAAATC
AAGATTTGGATTCATAGCTGGATTATACTCACAAATTGAATCAACTGTAA
TCCTTTGGTTTTTCTGTATTCCCTTGTTATGGAAATTCTCTGGAGATGTC
AATGCTATGATTGGATTTGATGAAACTCACGAGATCAAGAGATCAATGTT
GTTCATGGTGTTTGCATCCATCTTCTCCACCATCACAAGTCTTCCGTGGA
GTTTGTATTCCACTTTCGTCATTGAAGAAAAACATGGCTTCAATAAACAA
ACACTTGGCTTTTTCTTCAAAGACCTGGTCAAGAAGCTGGTTGTGAGCAC
TTTGATTACCCTCCCCATTACTGCAGCTATCATATGGATTGTCAAATGGG
GTGGTGATTATTTCTTTGTTTACGCTTGGTTGTTCTCTCTCACTGTGTCT
CTGTTCATTATTTCCATCTATCATGATTACATTGCACCATTATTTGACCG
ATTCATCACCCTACCTGAAGGTGAATTGAGGGAATCAATCGAGGCCTTGG
CAAAGAGAATCGAGTTTCCATTGACCAAGATTTTTGTTGTCGAGGGATCG
AAACGCTCCTCCCATAGCAATGCATATTTCTTTGGATTCTATAAGAAAAA
GGTGATTGTGTTGTTCGATACTTTGTTGAAAGTAAGCCCATTTGAAGAAG
AGAAACGcctaaaagaagaagaagaaaaaaagaagaaaattgaagagGAA
GGAGAAGGCAACCAACAAGATGAAACAGAAGAAAAAGATGGCGAATCAAA
GGAAAAGAATGAATCATCGGAAGGAGGAAACACGGAGAAGAAGAAGGAAG
AGAAAGGCTGTTCAGATGAAGAAATCCTCGCCATCCTCGGTCATGAACTT
GGTCACTGGAAACTCAATCACATCCTCAAAAATCTGGCCATCAGTCAAGT
AAGGGATAAATTCATTGAGTTTGCGGACAAACCGAGCTTCAGAGGGTCTT
ATTTTGGCCTGGAGAAAAGGCacggaaaaaattataattcgATGGGCTAA
AAGTTTGGTTCGCCGCCTCAGGTGCATTCACACACTAATTAATACACCAG
GCTTGTTAAGCATTTGCTGGCCTTGAATCTAGAATTTGCCGGAGTTAATT
TTTGATTCGCCAGCCTATCGAAAATAAAGCAAAACCTGGTTAAACGAACA
CTTACGTTGCCCTTCTTTTTGCAGGTGAATTTGTTGTTATCTTTCTTCGT
GTTCGGCTTGCTAATGAACAACAGCATGCTGTACGAAAGCTTTGGATTTT
ACAACGAGATGCCGACACTTATCGGATTGATGATCATCTTTCAATTCGTC
TTCTCTCCTTATAATGAG
Run BLAST on NCBI

transcript from alignment at sc0000091:156235..168549+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009189 ID=TCONS_00009189|Name=TCONS_00009189|organism=Clytia hemisphaerica|type=transcript|length=12315bp|location=Sequence derived from alignment at sc0000091:156235..168549+ (Clytia hemisphaerica)
CGCATCGAAGCATCCAAAATGGCGGCGCCGATTTTCATCGCAACGTTGTG
TTTTATGTGGATAGTTTACATTTGGGAAACATACTTATCTTTCAGACAGG
TATATTTTGCTTGATTTAACAGCTTATTTTCACTGAAGATAATACTTTTT
AATGTAAATTCTGCCTCTGATAGCCTTTTTGCCAGTCAGGATGTTATCAT
ATTGTCCAGTCTGTCAGTTACCAGccgtaattaatcgaacagttcgatta
ccgaactaatcgaactttgtcgaacttaatcgaacgacaaaagcttgatt
aaattctttaatcgaacttttcaaaagtcgctaaaattgtgagtattcaa
ttaaagtttgacaaagttcgacaacgagaaatgttcgacaaatttgacaa
aaaactcTGTTCGATAAAGTTTGGCAACAAGAAaggttcgacaaattcga
caaaaaactctgtttgaaaaagttcagcaacaaaaaatgacctcctttgg
gtactaccgtggacggcccctgggggtcccgacCCGGCTGCTGCGGGTTC
CGGGAGAGTTTGATAGGTGCCCACTGCGCACTGGTCAGgagggatgtgag
ggtacacgcctgcaccagcGTGGGTGCTtaaaagttcctcaaagtgttgt
caaagttcgattagttcgattaagttcgattaatgtaattggaactaatc
gaactgtcgAGGTCTCTTTTAAagaagttcgattaagttcgatttcagta
atcgaacttaatcgaactttgtattttgagaaatttgcgAGTATTCAATT
AAAGTTCAACAACCGaacttagtcgaacattaatcggccaacaaagttcg
attaagttcgacaaagttcgattaaaaataccgttcaattagttcgatta
attacgtctggcaTATCAAATGAACTTTCACTGTTAATTTCCAGAGCTTT
CTTTCAAAACGGCTGAGGCAAATTAGGGAGTGCATGCCACCTAACCATGA
TAAATAAGTAACCAACCTGGATTTTCTTATAATCTACAAAACCTTGAGGA
TTtgacagtatagacttaaacttgtatatcaagattacgggatttcaaGT
ACGGGCCNatgcatattttaaaaattatgcatggctgtatcattgttttt
atgctggagtacataattattcaacatggctgcctctttaaaaaaaggtc
tattacgtCTGGGTTAGAGAGGAGTAACCTGagctgagatcagattgtgg
ttgttttctgcccaccacgctgaagctctaaagggatgggtgaaagaCAT
AACAATCTGGCGAATATGCAAACTCCaagtcatgcaacttttgttgacgt
caaaccaaatgtttcatttttccgtgaactttgaacccttctaacttttt
ttctatgtatgctaaagcgttccagtttttactaaaagaaagcccgtgat
cttagctttcccaTGCGTGTTCCAAAagacaaaacaatggaaatgcgTCA
ATCTGTTCAGCTGAccaaaatgacacaaaaatgacaaaatgaccTGTCAA
GACATTCTAATATCTTTTTATTTGGTATCAACCAATTTCAATCTTAACAA
AGGATAAATAAGCTTTTCATATAGCCAAACAGAATtaccatagcttttac
caaaaaaaatatatcaaagattcaatttcagccattttcagccaaatcta
aCTTTTGTTCTTGCTGGGGCTTCGTGGAAACTTATCCTGTCCATGTGTAA
ACATTCCCGTATGTTTGTTATGTACTTGACTACCCGTTGTCAAACCAGGA
TAAGACGGGGGTACtgcaataaaaagttatgcaagAAAAACCATAATTTC
GACCTCAAAAGGGGACTTTCTttgccaataacttttgatagaattgttCC
CCTAATTTCCCCTTTTCAGTAGGTCTTCCTCTATCTTATATGCTTCAGAA
AACAATGCCCTAAAAGCTTAGCCTCACGAAGCCCTGGCTAATAATATAAC
CCCCTGGTTATATCTTTGTATTCTTATCCTATAAATATAACGGAATGGCC
ATTCTACGGAAATTGCTGTCACGTGACTTTTTTCTACCGCGTGATACAAA
TCGCGCATTTTCATTggatgttgaaaatttatttgttaCGTCACAAGAAG
TTCCGACttcacatttttaaaaaacaaaatggcgaaaggacgttttttga
tatttatgattattgaaagaattcagttgattttaaggttttaattattt
ctttttcttttgccatgtgtactaaaagatTCTACAATATTTGGGGAACT
CAAATATccaaaagtttttctatttttcatggaaaaatgagctataAAGG
CAATTTCTTTGCTTAAGGCATAGTTCGGACCCCCTCCTTCTTaagggggg
atgacaccttccaaaaaagtgaagaaggggggggggTCAGAGATTTTCAC
TAAAAAGGGGGGGGGGAGCAAGGGGGGGGGGATTGTTTAAGAAGGGGGTT
TACATATATTGTAGATTAATTTCCAGCACTGTTATGAAATTTGGTCTGCA
TGAaaggaagttctttattttcactaaaaagtggtattatatttgccaga
cttaatttttctttactgtttcccttccctttttaccataaaaaaattag
cccgaaacccttgggggataggcatttttaaaggttggggggatgccaag
aaggggggatcatttaagaaggggggatcagacccctttccacACTATGT
taaggtttgttttttcttcgtgaactttcattttcaatctttctttaaag
atttaatattttatcaattatcTTGGGATTTTGAGGGCTCATTCTAGAAC
TATTTGGGAGTAGAGAGCTTTTTACAGATCTTGAAAAGGTTTACTAATTC
TTTAGATATAGTTAAAAGTTTAGACATTGGTAAAACTTATTTCTCCGATC
GAACATTGACACACGCATTTCCAAATTAAACACGCTCCAGctgtatataa
cactgtggacacgggctagacagAAAATTGGTAAATTGCAGAACGTTTTT
GCAACATTTAAGATTTCGAATTCCGtgggaaaaaaaaaatagttgcAACT
GTTGatgaacaaatgtttctggaaatggaggaaaaagtagttgaaggctg
aaactttgtatgtttatcagaaaaagggtgaggaattcaaaaatcacatt
cgctaattttagttctttcattttcatgtagtttttttcacttttttggt
tctatagcatgggaatgtcccaaaaaaaaagtttttttttctgccgaaat
ggattttcttttggtttggggtttctcctttcagtcacagtcataaaact
aaaaatcaGCGCTCATTGGTTGTGACGTAGTTTACGAAATGGTTTAATAT
AAAATGACatactttttaacaacttttttctacgtcatttttttgaagcc
tcttcgtaggagaatgtgtctttctataaggaattttacatctatccgca
gacacgtgtttcgtcCTTCCAAGGACTCATCAGTGCGACTCAGGTAAGCA
AGCATAGACTgctgttgtcaccagagtgctcaaaacactaaAGTGTTGAG
CTTcgcataatcgcttgtggtgaaCGGAAAAGCAGAACTTGCTCCTCAAC
AGAGTCTAAAGAGTGCTCCAATATAattataaggaattttataacacttt
ttttatgacacttcatggcagattaaaaagacaatcagaaaacttttcat
tttcgcattaatgaggaagaatgaaatttttagaagatgctgacttttag
ttttacgACTTGTTCACACTCGTTTGGTTTCTGTcataaaaagaaagtcg
ttattgtgaactttgaacatgcttaaaatcgaggtacttccactaactga
cgcagctccgctcgcaacTCTagctactctaccatttttgttttgattta
actttgtattttaatgaccagccaggtcattcatttgagggctgtgcaag
tttccctccactgattcAAGTTCCCGACTTCATGGTAGCTAATCGATATT
AATCAATGAATTAGATATCGATTACTTTTCGGTACTGATTATTATCGATT
ACTCATCAATAGGCTATCGATTATTATCAATGAAATATCAATCAATATTG
ATTACCTTCCATCGATAATATTGATTACATCAATCAATTATTAAATGATC
GATAATATTGATTGGATCGATAGCAATTGATAGCTAATCTAGTTGATCGA
TTAATATTgattagctatcgattttaaTCCGATGATCGGTTTAAACGATT
AAGATCGTCTGGACCTTTTCACCAGTCTGGGGGCAGGGAATCGGGCAGCC
TGAAGTTTCTTGAAGGTAAATTGTTACGGGAAATCCATGTCGTCCACAGG
CAGTATTATAATATAGCCGTATCTGTTCGTATAAAAGTTATGGGAAATtt
atatttggactttgtatcCAGTGTTGTACACAAGCACTATGATGTTTGTa
tgatttcagattttttatttacttcAATTGTTGCTTTTATCAAACTTTCC
ATCCTCTTGCAGTATAAAGTGTACCGTGACACTGATGATGTTCCAGAGGA
GCTCGAAGACTACATTGATGAGGAGACTTTTGAAAAGTCACGGAGTTACC
AACTCGACAAATCAAGATTTGGATTCATAGCTGGATTATACTCACAAATT
GAATCAACTGtaagtttttcttctttttatcccCCAATCTTTATTTAAAA
ctatatttttccattttccattcTTTGAAAGTTCTGTACCTTAAAGTGGG
TAATTTTCAAGTGAACCTTTTAGGCAAATcaagatttgaaattttgtgcA
TCGacattattttcataaattgacctattctaaaaatttcatgtggattt
ttggacctaccccggtggaggtcctataaattaacctttgtccgttcgtt
cgttcgtccgttcgttcgttcgttcgttctttattagctttcctcatgat
tggctcgttagttttttctgattttttgcacaaagatgcataactataaa
ccctcgaatgtgacggagcccgattttcaaaaaaaaaattttttgggcca
atttgggccaaaaaacggctaaaaaacgggttttttggactttgtgaaaa
attaggtcgttaattttttctgattttttgcacaaagatgcataactata
aaccctcgaatgtgacggagcccgattttcaaaaaaaaaattttttgggc
caatttgggccaaaaaacggctaaaaaacgggttttttggactttgtgaa
aaattaggtcgttaattttttctgattttttgcacaaagatgcataacta
tagaccctcgaatgtgacggagcccgattttcaaaaaaaaattttttggg
ccaatttgggccaacaaacggctaaaaaacgggttttttggactttgtga
aaaattaggtcgttaattttttctgattttttgcatgaaagtagggtacc
atcgtaggtaaaagatggcttaagcgaatttttgcaaaaaaattttgttg
gctcaaaaaaacgcatgtttatctataagaatcactattaataagcatac
atcaatgttcttagtcaaattactcaattttttttattagatagatgttt
tttatgctcaggagggcttatttttaaagaatatgtgtgttttgGTTGCT
TGacatgtttttatagaaaaactggccaaattcgatatttttttataagc
acattatcaattacttaggtattagcttttttcgagattggctctttcat
tctttacggatttttgaacaaagatgcataactatagaccctcgaatgtg
acggagccagattttcaaataaaaatttttggggcaaatttgggccaaaa
aacggctaaaaaaaagggtttttggactttgtgaaaaaatggatcattaa
ttttttttgcatgaaagtagggtaccatcataggtaaaagatggctcaag
cagaattttgcatttttatctataagaatcactattaataagcatacatc
aatgttcttagtcaaattactcaattatttttatgagatatgattttttg
ctctcgaagtcttgaatatgaaagaatatttcaagagcatgaaattttgg
tttctaaacgtgtttttttataagaaaNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttctgaat
gattgtttaatggtcacgcttatgtagatatcaattatatatgtgttaaa
tgcataaacaggtaggtccataaaagtatcacttgttattctCGAAATGG
GGCTTTGGTATTGAATGTAGCAATTTCGAATATTTTTAATTAACATATTG
GTTACCCATCTGctattttacattttcatatattttgtccaaagaaggaa
aataaaggttgaaaatggggaaaatacaATTTCATTGATGTATTTCGATT
TTTGTGAGATTTTATTTGTACTATTGGAAATTTTTCGTGGACTCAAAAAC
TAATCTACTATTGAATTCTTAAATATCAGTTCtaataattttgttttcta
GGTAATCCTTTGGTTTTTCTGTATTCCCTTGTTATGGAAATTCTCTGGAG
ATGTCAATGCTATGATTGGATTTGATGAAACTCACGAGGTAATTAGACTA
AAATATTACTTTTGTCATGATAAAGAGATAATTTTATTGAgtgattggaa
aaaaattatatgaTTTTTAAGGGCCAACAGATTCTCTCAAACAAAGTTTA
CTTTAAAGAATAATTTCATGGTGGCCAGCGACCTTTGaattccttgaaac
ccttgaaacaaccttgatttttttcctacccttggaaattttctttgaaa
cccttgaaaaatcaatttaatctctgaaatacaaaatttttcctACCGAG
TCGGATACAAACATCACTGAATTAAATTAGAAAACATACTTTTGGAACCC
CTGAGATTCAAGGGGTTATTCCCGCTCATTCTTTAGGGGTTTACATCCAT
TAGGTACCACTGGAATTATATGAGATCGGCAGGTCTGGGTGATAGAATGG
GTGGTTGTAAAATTATACTAGCTTCTGATTTGTGTTCATTTTCCGCCCAT
CTAAAGTGTACTTAAAATCATAGATTCTCTCCGTCGGGCCCAACTATAGT
GGGCCCTCCTTTGCTACAACTATAAAGAAAGTATCTGCTGAAGAATGTTA
TTGAGGTTCTGTTCAAAATCAAGGGAATTGGAAAGACTGATTTGCTTGAA
AGATTTCAaggtttttatgatttttaaggAGGATGaattgaaaattcaac
ctttctccTATTGTCGACAGATTTCCTTGAAATTCTTGAAAACTAGCAAA
GATCAACTAAAAACCCTAGAAATCCtggaaaattagtcaaaaatgaCCCT
TTGAAACCCTTGAATTTGGTGAAAAAGAAGTGCTGGCCACCATGAATTTA
CACTAGATAGCTTGTGATATATTCGATTGCTATTTATTGGCCTCAAATTT
CGTGTATATACAACACACTGTGATAAGTTAGGTTATGGATAAAGGTCTTT
GTCTTTGTCAGGGAAAATTTAAAGTAAGACCGGTGacgaataaataaatt
ttcaagttGCCCTCAAAATGAAATTGGAAAGTTTGTACAAAATCACTGCA
CGTCTATTGACTTTTCTTCTCCTTTAGATCAAGAGATCAATGTTGTTCAT
GGTGTTTGCATCCATCTTCTCCACCATCACAAGTCTTCCGTGGAGTTTGT
ATTCCACTTTCGTCATTGAAGAAAAACATGGCTTCAATAAACAAGTACGT
AGGGGTCACATGTCTGTGTTTTCAATTCTGCTATTTGAGAAATTCAAGCA
AAACCTcacatttcttgatattttaggctaatttatttattttttatttt
aatttttttttcaaactttttttaaattgatatcGTGAAAGAAATTATTT
TCCAGCTAAAAAGTTAAACAGTTATTCATGAAAATACTTAACTTTGGCTT
GTCACGTTTTGCTATTATTTTTTAGACACTTGGCTTTTTCTTCAAAGACC
TGGTCAAGAAGCTGGTTGTGAGCACTTTGATTACCCTCCCCATTACTGCA
GCTATCATATGGATTGTCAAATGGGGTGGTGATTATTTCTTTGTTTACGC
TTGGTTGTTCTCTCTCACTGTGTCTCTGGTACGTATTGTGCTTTGTTTTC
TTCAATAACATTCTTATAATAGCcgtttcaataaaaatatcatGATAAAA
GGAAAACTTTTATTTGTTAGAATAAACTTTCATGAATCAGCTTTTCATAA
TATATTGCCAAACCAAATCgcgaatgtaaacaaaatacatgttttttaag
cAAGTGGCTGCCCCTTTGTCAGGCTTGTATGCTGGctactcaattttttt
cactCCTTCATATTTTTCCAGTTCATTATTTCCATCTATCATGATTACAT
TGCACCATTATTTGACCGATTCATCACCCTACCTGAAGGTGAATTGAGGG
AATCAATCGAGGCCTTGGCAAAGAGAATCGAGTTTCCATTGACCAAGATT
TTTGTTGTCGAGGGATCGAAACGCTCCTCCCATAGCAATGCATATTTCTT
TGGATTCTATAAGAAAAAGGTAAGACACATGTCCTTTGGTAATTTAAGAA
GCTTTTCTTTTAATCAGGTTTCAGAGACCTTAGCAATCTgaatattgaaa
aatttttgaagagagCTCAAATTCTCGGAAAATTATACATCGATCTCAAG
TAATCTTTAAGCATAAAGATGTATAACTCAGTAAATGGCAGTCTAGAACC
CTTACGACACTTGTCTCAACGAGATGGAATTGAAATCTTGAATCTTGCTT
TTATTGTAGGTGATTGTGTTGTTCGATACTTTGTTGAAAGTAAGCCCATT
TGAAGAAGAGAAACGcctaaaagaagaagaagaaaaaaagaagaaaatNG
CGTATTGTGCTTTGTTTTCTTCAATAACATTCTTATAATAGCcgtttcaa
taaaaatatcatgataaaaggaaaacttttttttgttaaaataaacTTTC
ATGAATCAGCTTTTCATAATATATTGCCAAACCAAATCGCGAATGTAAac
aaatacatgttttttaagcAAGTGGCTGCCCCTTTGTCAGGCTTGTATGC
TGGctactcaatttttttcactCCTTCATATTTTTCCAGTTCATTATTTC
CATCTATCATGATTACATTGCACCATTATTTGACCGATTCATCACCCTAC
CTGAAGGTGAATTGAGGGAATCAATCGAGGCCTTGGCAAAGAGAATCGAG
TTTCCATTGACCAAGATTTTTGTTGTCGAGGGATCGAAACGCTCCTCCCA
TAGCAATGCATATTTCTTTGGATTCTATAAGAAAAAGGTAAGACACATGT
CCTTTGGTAATTTAAGAAGCTTTTCTTTTAATCAGGTTTCAGAGACCTTA
GCAATCTgaatattgaaaaatttttgaagagagCTCAAATTCTCGGAAAA
TTATACATCGATCTCAAGTAATCTTTAAGCATAAAGATGTATAACTCAGT
AAATGGCAGTCTAGAACCCTTACGACACTTGTCTCAACGAGATGGAATTG
AAATCTTGAATCTTGCTTTTATTGTAGGTGATTGTGTTGTTCGATACTTT
GTTGAAAGTAAGCCCATTTGAAGAAGAGAAACGcctaaaagaagaagaag
aaaaaaagaagaaaattgaagagGTGAGTACAAGAGAATACTAAGTTTTA
ctatgaattttttgaaaagtttcaaaattaaaaatgaaactttcaatCTT
AGAGGGACACCGAAGGTTTTTaacatttattttttcatctgtATAAATAC
TGTATTGCCATTTATATACCTCTCACAATTTAaacgaagcaaaaaaaaaa
gaagagaaaatttgaatttttcccCACTGCTGCGCACGATAGATTTGCAT
CATATTTCCAATCTCCGTTTCTTTATTTTAAGGAAGGAGAAGGCAACCAA
CAAGATGAAACAGGTGATTACTAAATTATATCTAAGGCTTTTGTATTATA
GGCTAGACCACAGATTTCTGTTAAGGCCGAAGGGCTAGCTGGCGTGCTTT
AAgcttttacaagcaaaaaaagtgaatatatcgcaaaaaatattgttgct
gtTCTCGAAagaaagcttctgattggtcgagCGCTGAATTTCTATTATAA
TGTCatgtgacttaggtaggatttcctaccgaaATACGGCacaattttca
gccaaagcacgccatctagcccttctggCTTTACAAAAATCTGTGTGCTA
GACAGCCTTGGTTATTAAGAGTCTGGTTGAAAAGGATTAGGGATAAGCtg
gtgttttttatttaaaaagaatttcgTACAACTAAGAGGAgtcttttctt
tttggttttatTATCTGAATGATAAAATGTCTGTTCaatataagaaaata
tttttgtgcttttttttcaaaattaatttaataATCTAAATGTTCTTTTC
TCTTCTCAGAAGAAAAAGATGGCGAATCAAAGGAAAAGGTAACTTTATAA
ATGTCAAGATGTAACACAATCGACCTCAATCTAATTTGCAACTTTGTACC
TCTGGGGTTATATATACTACACCCCTTctcatacacccctgtctcagtgc
cccggtggagctttttccctcagtggggatgaaaatttctatcgagatcc
caatggggatagaaaatcttttgtttccaattccagctcaaaaatttcag
tggggatggttttggagtgcagtttttcccattcaatttctaattgggat
aaaatcatagagcaatttcccagtggggttgaaattttagggtatttttt
ccaccgaggacgattttttggcctatttttccaccagggcgtggggtcca
ccgggtctgtgacacatgggTGTTCTCATAGACCCGCTGGAACCCCTTCC
cgctggaaaaattgtccaaattaTCGTCCCCGGATGAAAATTattctcta
atttttgtccccactgaaattaATCAAATAAATTAATCCTGCTAAATCGC
TGCTAAATATTATGCAATTTCTCTATCCCCACTAAGTTTTCTgacttttg
aaaacaaaagaattgaaatccccagccataaaagatatgggaatatcaat
ccccatcgagtttcagtccgtttttttacccccactggcttaaaaaatcc
taccgggtctgtgataaGGGGATGTTATACaggtttttgtttcaaattga
GCTTTGTCACGGCgggaacatttttaaaaacactGAGGTGTGCTTTTAAT
GTTGTCTTTACCGTTCTAAACTGTGACACAAAGCatttaaacatttttct
ttatacGGTGTAGTCTCTTTAATGCGAATGCCTTTTACTCAATACTTCAT
GGTCACTTCAGTCAACAATGCCTCATAAACTTTACTccgtaactcgaaat
ttccttaactctaACAAATGTGTGTTCCCTGtatgtgttcgagttatgga
gactccactgtatcaaAGATATTTTTACAGTCAATTTACAGCTATGTATT
AGGTTCAATAAGGTTTCACGTACTCTTTCAGTGATATAAACATTCCATTT
TTAGAATGAATCATCGGAAGGAGGAAACACGGAGAAGAAGAAGGAAGAGA
AAGGCTGTTCAGATGAAGAAATCCTCGCCATCCTCGGTCATGAACTTGGT
CACTGGAAACTCAATCACATCCTCAAAAATCTGGCCATCAGTCAAGTAAG
GGATAAATTCATTGAGTTTGCGGACAAACCGAGCTTCAGAGGGTCTTATT
TTGGCCTGGAGAAAAGGCacggaaaaaattataattcgATGGGCTAAAAG
TTTGGTTCGCCGCCTCAGGTGCATTCACACACTAATTAATACACCAGGCT
TGTTAAGCATTTGCTGGCCTTGAATCTAGAATTTGCCGGAGTTAATTTTT
GATTCGCCAGCCTATCGAAAATAAAGCAAAACCTGGTTAAACGAACACTT
ACGTTGCCCTTCTTTTTGCAGGTGAATTTGTTGTTATCTTTCTTCGTGTT
CGGCTTGCTAATGAACAACAGCATGCTGTACGAAAGCTTTGGATTTTACA
ACGAGATGCCGACACTTATCGGATTGATGATCATCTTTCAATTCGTCTTC
TCTCCTTATAATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005158XLOC_005158Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009189-exon-sc0000091-1491911889:156235..156333TCONS_00009189-exon-sc0000091-1491911889:156235..156333Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1510915933:156235..156333TCONS_00009189-exon-sc0000091-1510915933:156235..156333Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1575043694:156235..156333TCONS_00009189-exon-sc0000091-1575043694:156235..156333Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1491911889:160797..160943TCONS_00009189-exon-sc0000091-1491911889:160797..160943Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1510915933:160797..160943TCONS_00009189-exon-sc0000091-1510915933:160797..160943Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1575043694:160797..160943TCONS_00009189-exon-sc0000091-1575043694:160797..160943Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1491911889:162936..163022TCONS_00009189-exon-sc0000091-1491911889:162936..163022Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1510915933:162936..163022TCONS_00009189-exon-sc0000091-1510915933:162936..163022Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1575043694:162936..163022TCONS_00009189-exon-sc0000091-1575043694:162936..163022Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1491911889:164062..164178TCONS_00009189-exon-sc0000091-1491911889:164062..164178Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1510915933:164062..164178TCONS_00009189-exon-sc0000091-1510915933:164062..164178Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1575043694:164062..164178TCONS_00009189-exon-sc0000091-1575043694:164062..164178Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1491911889:164410..164562TCONS_00009189-exon-sc0000091-1491911889:164410..164562Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1510915933:164410..164562TCONS_00009189-exon-sc0000091-1510915933:164410..164562Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1575043694:164410..164562TCONS_00009189-exon-sc0000091-1575043694:164410..164562Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1491911889:165574..165771TCONS_00009189-exon-sc0000091-1491911889:165574..165771Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1510915933:165574..165771TCONS_00009189-exon-sc0000091-1510915933:165574..165771Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1575043694:165574..165771TCONS_00009189-exon-sc0000091-1575043694:165574..165771Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1491911889:166012..166107TCONS_00009189-exon-sc0000091-1491911889:166012..166107Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1510915933:166012..166107TCONS_00009189-exon-sc0000091-1510915933:166012..166107Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1575043694:166012..166107TCONS_00009189-exon-sc0000091-1575043694:166012..166107Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1491911889:166367..166397TCONS_00009189-exon-sc0000091-1491911889:166367..166397Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1510915933:166367..166397TCONS_00009189-exon-sc0000091-1510915933:166367..166397Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1575043694:166367..166397TCONS_00009189-exon-sc0000091-1575043694:166367..166397Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1491911889:166894..166922TCONS_00009189-exon-sc0000091-1491911889:166894..166922Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1510915933:166894..166922TCONS_00009189-exon-sc0000091-1510915933:166894..166922Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1575043694:166894..166922TCONS_00009189-exon-sc0000091-1575043694:166894..166922Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1491911889:167989..168549TCONS_00009189-exon-sc0000091-1491911889:167989..168549Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1510915933:167989..168549TCONS_00009189-exon-sc0000091-1510915933:167989..168549Clytia hemisphaericaexon
TCONS_00009189-exon-sc0000091-1575043694:167989..168549TCONS_00009189-exon-sc0000091-1575043694:167989..168549Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:156235..168549 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.103651	0.0966429	0	0.847454	0.334694	0.658762	0.662549	0.304909	0.820232	0	0.868316	0.288185	0.200609	0.375765	0.386528	0.0753284	0.158585	0.293539	0	0.447362	0.337073	0.11836	0.326346	0	0	0.553407	0.120372	0	0.235222
Blast
[Close]
BLAST of TCONS_00009189 vs. Swiss-Prot (Human)
Match: FACE1 (CAAX prenyl protease 1 homolog OS=Homo sapiens GN=ZMPSTE24 PE=1 SV=2)

HSP 1 Score: 358.607 bits (919), Expect = 1.413e-117
Identity = 192/359 (53.48%), Postives = 253/359 (70.47%), Query Frame = 1 
Query:   31 IFIATLCFMWIVYIWETYLSFRQYKVYRDTDDVPEELEDYIDEETFEKSRSYQLDKSRFGFIAGLYSQIESTVILWFFCIPLLWKFSGDVNAMIGFDETHEIKRSMLFMVFASIFSTITSLPWSLYSTFVIEEKHGFNKQTLGFFFKDLVKKLVVSXXXXXXXXXXXXXXVKWGGDYFFVYAWLFSLTVSLFIISIYHDYIAPLFDRFITLPEGELRESIEALAKRIEFPLTKIFVVEGSKRSSHSNAYFFGFYKKKVIVLFDTLLKVSPFXXXXXXXXXXXXXXXXXXXXXGNQQDETXXXXXXXXXXXXXXXXXXXXXXXXXXXCSDEEILAILGHELGHWKLNHILKNLAISQVRD 1107
            IF A L F W VY+WET+L+ RQ ++Y+ T  VP EL   +D ETFEKSR YQLDKS F F +GLYS+ E T+IL F  IP LW+ SG      GF   +EI +S++F++ A++FS +T LPWSLY+TFVIEEKHGFN+QTLGFF KD +KK VV+  I LP+++ +++I+K GGDYFF+YAWLF+L VSL +++IY DYIAPLFD+F  LPEG+L+E IE +AK I+FPLTK++VVEGSKRSSHSNAYF+GF+K K IVLFDTLL+            +E+   +   E EGN ++                     + K +++GC +EE+LA+LGHELGHWKL H +KN+ ISQ+  
Sbjct:   19 IFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALTGLPWSLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEE---YSVLNKDIQEDSGMEPRNEEEGNSEE------------------IKAKVKNKKQGCKNEEVLAVLGHELGHWKLGHTVKNIIISQMNS 356
The following BLAST results are available for this feature:
BLAST of TCONS_00009189 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FACE11.413e-11753.48CAAX prenyl protease 1 homolog OS=Homo sapiens GN=... [more]
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