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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009182 ID=TCONS_00009182|Name=TCONS_00009182|organism=Clytia hemisphaerica|type=transcript|length=502bp
GTTTAGCTGTCTCATTATTGCAATTAAAAAGTACAAAAGATGcataaaaa
atttcttaaaaaagacCTTTAAGATTGTTCTATATCAATCAAtgaaaaac
ctcaaaaaaaaaGCTCAGTTTAATTTTATCCATGGGGACCAGACACCCCC
ATGTAATCTTGGGTCAGCCATTTTGTCTCCTGGCTTGTTTCTGTTGGGAG
CTacactttttttgtaattttcaagtttgtttttcatttgtcgATAAATT
TCAGGATATTGACTTGAAACATCATTATATTCACAANCCATTCCCTTTTT
GTAATCTTCaagtttgtttttcatttgttgatAAATTTCAGGATATTGAC
TTGAAACATCATTATATTCACAAGGATCGTTTTGTAGATTGAACAGACAA
TGTGTTTCATTGCAATGTGTTGTTTTGTCAGGTTTTGGACCACATTTGAT
AACCGTTTTTGCTTTTCCAGTGGCATTGTATCCTGGGGCTTTGATCCAAC
CG Run BLAST on NCBI transcript from alignment at sc0000091:63133..71615+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009182 ID=TCONS_00009182|Name=TCONS_00009182|organism=Clytia hemisphaerica|type=transcript|length=8483bp|location=Sequence derived from alignment at sc0000091:63133..71615+ (Clytia hemisphaerica)
GTTTAGCTGTCTCATTATTGCAATTAAAAAGTACAAAAGATGcataaaaa
atttcttaaaaaagacCTTTAAGATTGTTCTATATCAATCAAtgaaaaac
ctcaaaaaaaaaGCTCAGTTTAATTTTATCCATGGGGACCAGACACCCCC
ATGTAATCTTGGGTCAGCCATTTTGTCTCCTGGCTTGTTTCTGTTGGGAG
CTacactttttttgtaattttcaagtttgtttttcatttgtcgATAAATT
TCAGGATATTGACTTGAAACATCATTATATTCACAANCCATTCCCTTTTT
GTAATCTTCaagtttgtttttcatttgttgatAAATTTCAGGATATTGAC
TTGAAACATCATTATATTCACAAGGATCGTTTTGTAGATTGAACAGACAA
TGTGTTTCATTGCAATGTGTTGTTTTGTCAGGTTTTGGACCACATTTGAT
AACTGATGTTGCTTTTCCAGTGGCGTTGTATCCTGGAGCCTTGATCCATC
CGTCAGAGTATACTAAAGATAACAAATCACATTGTAGTTGAAGCACGTTT
TACTTTTTTGAGCACTAATCgttaatttaaaaacatttttttcgtgcaaa
aaaaaaagattgaaaagacAATACTAATCGTGCGTACAAACAATAATGGA
CTCGTTCActttatttttaattcttttaatGCTATAGAATTAGTTTTGGT
GAAAATCACTTTTCCAGACTCCAAATaacaaagttgatattataaggttc
agaaaacaattgagtAAAACTTCAGGTATGTAAATCAATTTCTTACGCCC
GTCCTCATAAAGGCTGTCAACTATAATTTTCCATTCTCCAGCTATGAGGG
CTTCTTGATTAAAGAAGTGATCGATATTCAACAAGATTTCTTTTCTTGGC
GATTCAACGTCactttgcaatgtcttccactgatcaaaaccatcaatttc
ttttgtgattttccctTGAGCAAGGTTGACGATAGTTGGTAACCAATCAG
TAACATGCATCATTTGCATTGAAGTAACACCTGATCTTTTCAATAGTGGA
CTGTTGATAAACGCTGGCACTCGGACTGCACCTTGGATTTACAGAGATTG
GTTTTAGATAAACTATTTATAAATTAAGACTGTTAGGTAAAATTCAAAAG
GTTCTgtattcttcaaattttaaacaatctCCGAGGCCGTCACTACCTTC
AGTAAATAGCCTTTGTAAAACAGTTTGGAGAAAATATCATGTAAAAACAA
TACCTTCGAACACCATGTGTTTTACACCTCGCAGAGGATAATTGCTTGAG
AATCCTTCCGTTGAAATGGCACCATTATCAGAAGTAAAGATAATGATTGT
ATTATCCAAAATGCCCTTCTCCTCCAACGCTTGATGAACCTAGATAAATG
AGGAAGTGTCTCGGTGATTGAGATCTGTGCTGCTGAGTAAGGATGTGTAA
AACATATACACTAACTTAAAGATGTGGCTGAGGGTTAGAAGATGTCCATG
CAGTTGCTATTTATTTGAAGAGGCTGACCAAAATTCATtgcaaaaatctg
aaaaattatgacttgattttttcttgacCCTATACCCCTTAAATAATATG
CAAATGTGAAGAAAAACATCAAGATACTTTTCCGATGGCTTCATCTAAAG
TAGCAACCATTGCAGCAAAAATCCTTCTCTTTTTATCTTCAATGTAAGAA
AATCTATCGATCCAATCTCGAGGAGCCATCAGTGGGCCATGAGTGTTTTG
GAAGGGAAGGTAAAGAAAAAGAGGCTGTTCTGATTTATGTCCGTCGATGA
TGTTTATCGCTTCAGAGGCGAATAATTCGCTGCTGTATGTTCCATTTTGT
GACCAATCAGGCTATAAAGAGATACAATGGACAACTGAAAGCTTAATTCT
GATATTGCACGTCAAATACAAATTCTTAAATACATAGCTTAATTACTGCT
TGATATAATCAACATCCGAACGAACGAACgtacgaacgaacgaaaaaaaa
ttattatactTCACTGATTCCTTGATAATCACGGCGTAAATCTAAACCGT
AGAAATGTTCGAAATCAGCTCCCGATCTCGAATGACTGAAATACTCTTCT
GAACCAGAATAGTATCCATAAAATGTGTCGAATCCTCTGTTTGTTGGCGT
GTACTCCTTCGCGAAGAATCCAAGGTGCCACTGGAAAGTAAAGATTAAGT
TTTTATTACTAGTAATTTTAAATACATAGATTTTTAACCAAAGGTTAGTT
TGCTAGTTTGATTGAAACGAGCTtggtctttttttatttattttactaTT
ATTATGTATTTTAACCTTTCCGACAGCATGCGTAGCATAGCccatttctt
tcaaatattgtgGGAGAGTCTTTTCTTCTAGCGAGAGACCCCAAGGTTCT
TCAATATAAATTGTATTGTGGTACATACCTAAATATAAAAATGTATTGAG
AAATTCAATCGATAAGTTTAGATTATTTTACAGCAAGCTGAAAACTAAAT
GCAATTATTTTCCGACCTTACCAGAAAGACCAAAAGTGTACTGTTTGATA
ATACTCATGTTTGAATCGCTGATCTCTAACTAATTTACTAGATCGGATTT
CCTATCAGACGTTCGAAAGTCTGACGTAAAATAGAAAAACCTGGAGGACT
AGTCAACTTTAAAACTTGGCACGATTTTACGGGAAATCTGTTAGTCAACC
TGTCTAGTGtgtaaaaaaaaatgtgttttgaCTCACCAGTATGAATAGGA
TATCTTCCAGTCATCAAAGCACTTCTCGTTGGAGAACAGATTGGTTGCAC
AtaataattattcaaaataattcCTTCTTTTGCCAATTTATCAATGTTCG
GTGTTGGGATTTGATCTGATCCATGAAAACCAACATCTGTCCAACCCTGG
AAGTACAATATCGGGAAAAAAATTGCTCAAGTCCTTAAGCTACATAATGA
CTTTGTACCTTTCAATCAAATGTTCTGAATTTGCAATGAagggaaaatgg
aaaaatattgaAGACAAACGTCTTACCAAATCATCAGCCACAATGAAGAC
CACATTTGGTGGCTGCTCGCTTTTTCCCAAAGCATATCCAAGATAAACGA
TGGTAAAAAATACAAGGTCGTTGAACTTGTCCATCGTTCAGTTTAGAATA
TTTAAGATTGCGTACATTACatttgttttattcttttatagATCTGTGAT
AAACAAAATGAATCAAGTTATATTCAACAGTCAAATGAAACTGCAAAGAA
TTAGGGAGTTTCCCTACATTAGCCAAATCGAGGTAACAATAGTAGCTGAC
ATTCATAGTAAAATTAAACTGTTTAATGAAAAGTGTTATGCTCGAGATCc
tataaaaatttacaatgcGTTAAATTAAATacgaaaattcataaaaaaga
tGTCAAGATATTTACCACAAAAAAGTACAATAAATACCTGAAAAGATTGA
GACACGTTCTATCACAAGATAAATAGTATAAAGCTAAAAACAATGAATTG
TGTTcgtgacatttttcaaaaaaggcaatATTCTACCAAATTCAGCTTAA
GTAGTTATCAAAGCTTGATCCAAGGCCCCCAAACACCATTGTGTAGTTTG
GGATCTGCATTTTCATCTCCTGGCTTGTTTCGATTAGGGACCATTCCCTT
TTTGTAATCTTCaagtttgtttttcatttgttgatAAATTTCAGGATATT
GACTTGAAACATCATTATATTCACAAGGATCGTTTTGTAGATTGAACAGA
CAATGTGTTTCATTGCAATGTGTTGTTTTGTCAGGTTTATGACCACATTT
GACAACCGTTTTTGCTTTTCCAGTGGCATTGTATCCTGGGGCTTTGATCC
AACCGTCTGATGCATAAACTAAATAATATAATATTAGATGTAAGTATCTC
CCTCGTTACTTTTTTATCACATGAATAAAATGAATTAAACTACGAAGGGt
ctattttatcaattttcagaTTAGTGAGCTCAAAGGGACTAAAATCCCAA
AAAGACAACCGAACGAGGAActgatttttcacttttttgcgaTTTTCGTG
AAATCCTACCTGGTACTAACTGGTAGAGACGGAAGGTAGGCCAAGTAGCA
CATTCATGTACCTCTTTTTGCTTAATTATCCCTTTCCCGACTTGCGTAca
tttaaaacatcaaaaaagtaTCTAAATCCAGGACCAACATTAAAAGTATT
TATATCCAGGGCTAGGATAAAAAAGTAATAGCTTACTGTCATGTTCACTG
TCGATAATAATTTTCCATTCTCCAGAAATCAAACCTTCTTGTCGAAACTC
CACATTATCGATATTCAACAAGATTTCTTTCCTTGGCGATTCAACATCac
tttgcaatgtcttccattgaTCCAAACCATcaatttcttttgtgatttcC
CCTTGAGCAAGGTTGACAATAGTTGGTAACCAATCAGTAACATGCATCAT
TTGCATTGAAGTAACACCTGATCTTTTCAAAAGTGGACTGTTGATAAACG
CTGGCACTCGAACACCACCTTTAGAAATTTTCCATAAATAAACGAAAATG
TTAAATCATAAATCTgtataaaaagacaaaaaggtaCCATAATTAGCAGG
TACTATATGTTGGATTGGACATATAAAGGTGGAGACTAAAATAATGAAGA
ATTTTTTGAATACCTTCAAAGACCATGAATTTTTCACCCCTAAGGGGATA
GTTACTTCCCATCCCTTGTCCTGAGGGTGCACCGTTATCTGAAGTGAAAA
TGATCACTGTGTTTTCTAGAATGCCCTTGGCTTCCAACGCACCGTTTATC
TAGAAAATAATGTAACATACATACTTGTTTAAAGCTTGAATTTAAGAGCT
TTTACTGGAATGTTGTATTATATAGGCGACTAAAGGCCGGAGCACACCac
tccaacatttcatccaacattttgttcaaatgttggatgaaatgttgaat
gaaaaactgaaaagtttTTGATCATGCCAAACCaggcaaaaatatcaaaa
cacatTTACAATGAACGCAATATGATTCCCAAAATTCGTTTCATATcatt
tggaaatttgaaaaaaagtttcgaCTTACTCGACCGATAGCATCATCTAA
TTGTGATACCATTGCAGCTAACACtcttctttttttatcttcgatgtaTG
AAAATTTATCAATAGTTTCTTGAGGTGCCATCAGAGGGCCATGGACATTT
TGGAAAGGAAGGTACAGGAAAAGAGGTCTTTCTGTTGGATGTTGGTTGAT
TGTAGTGATTGCTTCATCCGAATACATGTAGGTGCTGTAATTACCGTCCT
GTGTTCGCACTGGCTAAATAATAGACcggcaaaatgaaaaatgaaactag
aGTTGGAGAATTACGCTAAAATGTTAAATACGCCATGAAATAATCTGGTC
AAAAGCTATTTGAAGCGAGATTGAGTTAGTATTTATCAGGGCTGTATGAC
AAAAATTGTTGAAAGTTATTTCGACATTACATTTATGGCACTGGTAACTC
AAGCGTTAGGTTTAATTAATTTTGACTGATGATTTTTGCCTCCTTCAACA
ATTTTCAAGAACTCGTCACTATCTGATGGTTATTGGTTATTGAGCGAATA
CCTGTTGATCTCCTTCTACGTCATGGTGAAGATCAAGAccatgaaatttt
ggaaaatgatAGCCAGATCTGTTGTGGTAAAAATAATCCTCAGCTCCATT
GTAGTATCCGTAAAATGTATCGAATCCTCTGTATGTTGGGGTGTATTCTT
TAGCAAAGTATCCAAGGTGCCACTaaataaaaagtaataattttgAAGGC
TTTGGTAAAAGATATAAAAGATTCTTTCGGAANCGGTGTGTATTCTTTGG
CAAAGTAGCCAAGGTGCCActaaataaaagatttttaaaaatttttaaag
gcTTTGGTAAAGATGCCAAAGATATTTTTGGAGTAAGATGGGAGTAGGAT
CAATGGAGAATTACTGAACTACAATGACAAAAGTTAAAGAGATACAAACC
TTCCCGATGGCATGGGTAGCATACCCCAATTCTCGTAGATATTCTGGGAG
AATTTTTTCTTCTAAAGATACACCATAGGGCTCCTCTGGACAAATGACTC
CATGAAACATTCCTTAAAAAATAAGTGAATCGTGAAAGGTTTCTTTCCAA
GCTATAAACCTATTAGTCGATTAGTCATCTTTTTAAAGAATACATACCTC
ACCTTTCCAGAAGTACAACTTTGTAAGACCACTAtgccaaaatactaaga
aaaaatttaaaacaaatttagcgtcagatttttaaaatgtcAATGGTTTT
AAAGCCCTCTTTAGTTTAAGTGAATAAATACAAATTTAGCAGTCGAGTCT
GagtcaaaatttactgattgatacTTTAAATGATAAGGTTTAAACCAACC
AGTGTGAATAGGATATCTTCCAGTCATCAGAGCACTTCTTGTTGGAGAAC
AGATTGGTTGCACAtaataattattcaaaataattcCTTCTTTTGCCAAT
TTATCAATATTCGGTGTTGGGATTTGATCTGACCCATGGAAGCCAACATC
TGTCCAACCCTGATAGTACAATATTGGAAAAACAACTCAGACACCGGGTG
CGTCACAAagaagtttctctctttaaagttaattttctcaaggtctaaaa
actttaaaagaaccattccttttttattggaaagaagaaagataaactta
aattttgaggggtcatttattaaattcggttcttTAGATCGAGatttatg
ctcaattgaataaaaaagttatNtggaaagaagaaagataaacttaaatt
ttgaggggtcatttattaaattcggttcattagatcgaaaattatacttt
cagaaagtgctcgaaaacgttgaaaattgacctatcaaatttttatttca
aaattggcaatcgcaatagtttttacatgattaagagcaatATTAAGTGA
TCAAACCCATCAATTTTGAAGCTGAAGCCTCGAAAGGGCTTGGAATCGTC
ATCTCAGTCATTAtgatttacttttaccgaactTTTCCTCAGATCTCTGC
TTCTAGACTAGGTAAAGTCAATGTTAGGCAGGATTTACTTCAAAACctaa
tatttgatgtattttcacGAATCTTACcatattttttggcattttccgac
gaattttcttccttttattgatATTCAACTCTTACCTTTATACAACGAAA
TGTCATTAtcacagctaattatcatttttaatacttgaaacgaaaatact
gacgTGTTAAGTAATTATGCTTCTaattaatttgataggtcgatttccaa
tgaaaaaaaattaattctttcaaaaaNACccatcaaaattcaagttaatt
tttcttatttccaatgaaaaaaaattaattctttcaaaattttttaaact
aaaaaaaattcactttaaagagagaaacttttttgtggtgcacccggtat
ttcatcgatttcaaaattttaaaccaaAATTGCTTAAGCCGCCCTTAGGT
TACATAATGACAATCACATCTTCTGAGTTTGCATTGAAgggaaaatgaga
aaatattgAAGACAAACGTCTTACCAAATCATCAGCCACAATGAAAACCA
CATTTGGTGGCTGCTCGCTTTTCACCAAAGCATATCCAAGACAAACGATG
GTGAAAAATACAAGGTCGTTGAACTTGTCCATCGTTCAGTTTAAAATATT
CAAGATTGCGTACATTACatttgttttattcttttatagatctgtgataa
acaaaaagaatcaAGTTATATTCAACAGTCAAATGAAACAGAGAACGAAT
TAGGGAGTTTCTCTACATTAGCCAAATCGAGGTAACAACAGACATTCATA
TTAAAATTAAACTGTTTAATGAAAAGTGTTTTGCTCGAGATCctataaaa
atttacaatgcGTTAAATTAAATacgaaaattcataaaaaaggtGTTAAG
ATATCTACCACAAAAAAGTACATTAACTACCTAAAAAGATTATGACAATA
AATAATAGTAAAAGTTTACAATCTAAACCCTACAAGGATTGGATTGGCCA
TATAGCTTCAAAGAATACTTGACAACGTTCTAGCACAAAATAAATGAGTA
CAGTATAAAGCTTAAAGCAATTAATGCCTTTGTGACATTCCATTCAAAAA
AGGCAACATTCTACCAAATTCAGCTTAAGTAGCTATCAAAGCTTAATCCA
AGGTCCCCAAACACCACTGTGTAGTTTGGGATCTGCCATTTTATCTCCTG
GCTTGTTTCGATTAGGGACCATTCCCTTTTTATAatcttcaagttttttt
ttcatttgttgatAAATTTCAGGATATTGACTTGAAACATCATTATATTC
ACAAGGATCGTTATGTAGATTGAACAGACAATGTGTCTCGTTGCAATGTG
TTGTTTTGTCAGGTTTATGACCACATTTGATAACCGTTTTTGCTTTTCCA
GTGGCATTGTATCCTGGGGCTTTGATCCAACCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009182-exon-sc0000091-1491911889:63133..63575 | TCONS_00009182-exon-sc0000091-1491911889:63133..63575 | Clytia hemisphaerica | exon |
| TCONS_00009182-exon-sc0000091-1510915933:63133..63575 | TCONS_00009182-exon-sc0000091-1510915933:63133..63575 | Clytia hemisphaerica | exon |
| TCONS_00009182-exon-sc0000091-1575043694:63133..63575 | TCONS_00009182-exon-sc0000091-1575043694:63133..63575 | Clytia hemisphaerica | exon |
| TCONS_00009182-exon-sc0000091-1491911889:71557..71615 | TCONS_00009182-exon-sc0000091-1491911889:71557..71615 | Clytia hemisphaerica | exon |
| TCONS_00009182-exon-sc0000091-1510915933:71557..71615 | TCONS_00009182-exon-sc0000091-1510915933:71557..71615 | Clytia hemisphaerica | exon |
| TCONS_00009182-exon-sc0000091-1575043694:71557..71615 | TCONS_00009182-exon-sc0000091-1575043694:71557..71615 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000091 | supercontig | sc0000091:63133..71615 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR017850 | Alkaline_phosphatase_core |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008152 | metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008152 |
metabolic process |
| molecular_function |
GO:0003824 |
catalytic activity |
Blast
The following BLAST results are available for this feature:
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