TCONS_00009160 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009160
Unique NameTCONS_00009160
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length164

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009160 ID=TCONS_00009160|Name=TCONS_00009160|organism=Clytia hemisphaerica|type=transcript|length=164bp
AAAAATAGTGCTTtattttggtaacaaaaacaaGGAGCCTACTAAGTATA
TACTCCTGTACTTCCAAGTTTGTTCGAAGCGGGGATGATCCATGGAGCAA
TCTTTAACAAAAATCCAACCACTATCATTCCAGCATACAGATATGTTTCT
GATTAATTTGTGTG
Run BLAST on NCBI

transcript from alignment at sc0000090:69120..69283

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009160 ID=TCONS_00009160|Name=TCONS_00009160|organism=Clytia hemisphaerica|type=transcript|length=164bp|location=Sequence derived from alignment at sc0000090:69120..69283 (Clytia hemisphaerica)
CACACAAATTAATCAGAAACATATCTGTATGCTGGAATGATAGTGGTTGG
ATTTTTGTTAAAGATTGCTCCATGGATCATCCCCGCTTCGAACAAACTTG
GAAGTACAGGAGTATATACTTAGTAGGCTCCttgtttttgttaccaaaat
aAAGCACTATTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005134XLOC_005134Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009160-exon-sc0000090-1491911889:69120..69283TCONS_00009160-exon-sc0000090-1491911889:69120..69283Clytia hemisphaericaexon
TCONS_00009160-exon-sc0000090-1510915933:69120..69283TCONS_00009160-exon-sc0000090-1510915933:69120..69283Clytia hemisphaericaexon
TCONS_00009160-exon-sc0000090-1575043694:69120..69283TCONS_00009160-exon-sc0000090-1575043694:69120..69283Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000090supercontigsc0000090:69120..69283 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009160 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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