TCONS_00009065 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009065
Unique NameTCONS_00009065
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length367

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009065 ID=TCONS_00009065|Name=TCONS_00009065|organism=Clytia hemisphaerica|type=transcript|length=367bp
GATTTTTCTTCGGGCTTAATATTCGAGCCTGTCAGTCCAACTGACCCTCT
GCACCCTTGACTGCGGGCGTCTTTTCTTCGAGGTACACGTTCGCCCTCAC
TCTCACGCTACCTTGACTGCGGTAGTCTTTTCTTCAGGATTTTTCGACCT
TGTCTAGCACCACTTCAGACTGTGAGACGGAATAAATTTGTATAAGTGCG
AAGAAGAAAGTAAGTTCTGCTTGTGACACGAAAGACTTTGGTTGTATCAC
GATGCTTTCTTGAAGATTTCTTTCCGATATCCCAGATTTTTAACTCTTCT
TGGTTATCTGTTCTCACCGGATTCTTTTCTTCTCCGCAGCATGACCGTCC
GCCATCTTTAACCGTCG
Run BLAST on NCBI

transcript from alignment at sc0000089:444420..444786

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009065 ID=TCONS_00009065|Name=TCONS_00009065|organism=Clytia hemisphaerica|type=transcript|length=367bp|location=Sequence derived from alignment at sc0000089:444420..444786 (Clytia hemisphaerica)
CGACGGTTAAAGATGGCGGACGGTCATGCTGCGGAGAAGAAAAGAATCCG
GTGAGAACAGATAACCAAGAAGAGTTAAAAATCTGGGATATCGGAAAGAA
ATCTTCAAGAAAGCATCGTGATACAACCAAAGTCTTTCGTGTCACAAGCA
GAACTTACTTTCTTCTTCGCACTTATACAAATTTATTCCGTCTCACAGTC
TGAAGTGGTGCTAGACAAGGTCGAAAAATCCTGAAGAAAAGACTACCGCA
GTCAAGGTAGCGTGAGAGTGAGGGCGAACGTGTACCTCGAAGAAAAGACG
CCCGCAGTCAAGGGTGCAGAGGGTCAGTTGGACTGACAGGCTCGAATATT
AAGCCCGAAGAAAAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005077XLOC_005077Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009065-exon-sc0000089-1491911889:444420..444786TCONS_00009065-exon-sc0000089-1491911889:444420..444786Clytia hemisphaericaexon
TCONS_00009065-exon-sc0000089-1510915933:444420..444786TCONS_00009065-exon-sc0000089-1510915933:444420..444786Clytia hemisphaericaexon
TCONS_00009065-exon-sc0000089-1575043694:444420..444786TCONS_00009065-exon-sc0000089-1575043694:444420..444786Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089supercontigsc0000089:444420..444786 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.420989	0.946929	2.07404	0.497466	0	0	0	0.669019	0.589696	0.70313	0	0.149544	0.50238	0.504724	0.189084	0.320527	0.270809	0.458856	0	1.99821	0.308528	0.635364	0.257456	0.618205	0.568603	0.430319	0.769687	0	0.528613	0.391864
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009065 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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