TCONS_00009056 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009056
Unique NameTCONS_00009056
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length174

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009056 ID=TCONS_00009056|Name=TCONS_00009056|organism=Clytia hemisphaerica|type=transcript|length=174bp
CAAACATGGCGGTCAGGAAGCAGTGAGAAAATGGGAAACTGccggaaatt
aaaaaaagattgttcaaaattaataaaaatcatATCATTATAGTTCCTGT
TTGTACTTCCTCGTCAATTCAACGCATTTTACTAGATAATGCATTCTTTA
ACTAGATGTTACAAGGGTAGAAAG
Run BLAST on NCBI

transcript from alignment at sc0000089:246014..246187

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009056 ID=TCONS_00009056|Name=TCONS_00009056|organism=Clytia hemisphaerica|type=transcript|length=174bp|location=Sequence derived from alignment at sc0000089:246014..246187 (Clytia hemisphaerica)
CTTTCTACCCTTGTAACATCTAGTTAAAGAATGCATTATCTAGTAAAATG
CGTTGAATTGACGAGGAAGTACAAACAGGAACTATAATGATatgattttt
attaattttgaacaatctttttttaatttccggCAGTTTCCCATTTTCTC
ACTGCTTCCTGACCGCCATGTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005068XLOC_005068Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009056-exon-sc0000089-1491911889:246014..246187TCONS_00009056-exon-sc0000089-1491911889:246014..246187Clytia hemisphaericaexon
TCONS_00009056-exon-sc0000089-1510915933:246014..246187TCONS_00009056-exon-sc0000089-1510915933:246014..246187Clytia hemisphaericaexon
TCONS_00009056-exon-sc0000089-1575043694:246014..246187TCONS_00009056-exon-sc0000089-1575043694:246014..246187Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089supercontigsc0000089:246014..246187 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009056 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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