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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009041 ID=TCONS_00009041|Name=TCONS_00009041|organism=Clytia hemisphaerica|type=transcript|length=605bp
TGCCACCTTGCCAGGCCATAGAAGAAGGAAATGTATTGACCAAAACTGTG
CGTCTTATCAAATTAGAATACGTAAAATGTTGTAATTGTTTTCAAATACA
AAATGTAACCACCCTAACAAGGATTCCCCAGGATGAAACTGTTGTGGTGA
TTGGATTAAGAGGGAGATTTCTGTTGCATAAATGGTCCTTTTCGTGTCAA
AATTGTACATTCCACCAGCGTGCCCTTAACTTGGAAAGTGGGTTATGGTC
TGGTTACTGGCCTACATCTCCAAAAACTCTCAACACGGTCATTGAAGAAG
ATCTTCTTATGTTTTGGGACTCTTTTCGAAAAAGGATGCCAGGATCTTCT
GCGAAGGCTTTCGTTGATACACTTAATGATATCTCAATCACGAATGGAAG
GGTATGGCTATTTATATGTCTATTCAAATACTGAGTATGTAATTTGTACA
TTTTGTCTCTAAAAGATTTTTAGTGCCTAAGCAATAATAGAATCTAATTG
TTATAGAAATGAGAGTTTGATTGAAAACCAACGTAGTTCTCCGACCATGA
TCCTGACAAATTTCGGTGTTGATTTTTCTTTAGGATTGTTCTATTTACTC
GTAAT Run BLAST on NCBI transcript from alignment at sc0000089:523383..525257- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009041 ID=TCONS_00009041|Name=TCONS_00009041|organism=Clytia hemisphaerica|type=transcript|length=1875bp|location=Sequence derived from alignment at sc0000089:523383..525257- (Clytia hemisphaerica)
TGCCACCTTGCCAGGCCATAGAAGAAGGAAATGTATTGACCAAAACTGGT
AAAACCAAAGCATTTATTTGTATTTCTTTTTTTTTTGCGATATCGATAGT
CATAAGAAAACTGAATCTTTTGTTTTGATCTTTTCGTTAAAAATTTAAGC
TCTTTAATCTTTGAATGACTAGGTTTCAACAGTTTCTTACCTTTACTTTT
CAGTGCCTCTTATCAAATTAGAATACGTGAAATGGTATAATTGTTTTCAA
ATACAAGATGTAACCACCCTAACAAGGATTCCCCAGGATGAAATTGTTGT
GGTGATTGGATTTAGAGGGAGATTTCTGTTGCATAAATGGTCCGTTTCGT
GTCAAAATTGTACATTCCACCAGCGTGCCCTTAACTTGGAAAGTGGGTTA
TGGCCTGGTTACTGGCCTACATCTCCGAAAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTGTTATGTGAAGAATCTATTATATTTTCATAA
TAGCGAACAATACAAGAAAGAAAACTTGGACACAACGAATGGCAGACACC
GAGGAACAATGGTTCGATATTAGAGAAGATTTACTCTCCATTTCAATTAA
ACGATTCTGCCCCATCAGATGTTTTAGATGCTCAGATTCACCACCAGTTG
TTCGTTGTGGAGCTTGTGGCTACTTGTGTGGTGACTGTGATGAGGACGTT
CATCAGCATGAACCATTACACGATCGCATTGCCTTTATCGAAGGAAAAGT
GATACCATTGTCACCTTGCCAGGTCATAGAAGAAGGAAATTTATTGACCA
AAACTGGTAAAACCCAAGCGTTTATTTGTATTTCTTTTTTTTTTGCGATA
TCGATAGTCATTAGTGAAAGCTGAATCTTTTGTTTTGATCTTTTCGTTAG
AAATTTTAAGCTCGTTATTTAACCTTTGAATGACTATGTTTCAACAGTTC
CTTACCTTTACTTTTCAGTGCGTCTTATCAAATTAGAATACGTAAAATGT
TGTAATTGTTTTCAAATACAAAATGTAACCACCCTAACAAGGATTCCCCA
GGATGAAACTGTTGTGGTGATTGGATTAAGAGGGAGATTTCTGTTGCATA
AATGGTCCTTTTCGTGTCAAAATTGTACATTCCACCAGCGTGCCCTTAAC
TTGGAAAGTGGGTTATGGTCTGGTTACTGGCCTACATCTCCAAAAACTCT
CAACACGGTCATTGAAGAAGATCTTCTTATGTTTTGGGACTCTTTTCGAA
AAAGGATGCCAGGATCTTCTGCGAAGGCTTTCGTTGATACACTTAATGAT
ATCTCAATCACGAATGGAAGGGTATGGCTATTTATATGTCTATTCAAATA
CTGAGTATGTAATTTGTACATTTTGTCTCTAAAAGATTTTTAGTGCCTAA
GCAATAATAGAATCTAATTGTTATAGAAATGAGAGTTTGATTGAAAACCA
ACGTAGTTCTCCGACCATGATCCTGACAAATTTCGGTGTTGATTTTTCTT
TAGGATTGTTCTATTTACTCGTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009041-exon-sc0000089-1575043694:525210..525257 | TCONS_00009041-exon-sc0000089-1575043694:525210..525257 | Clytia hemisphaerica | exon |
| TCONS_00009041-exon-sc0000089-1575043694:523383..523939 | TCONS_00009041-exon-sc0000089-1575043694:523383..523939 | Clytia hemisphaerica | exon |
| TCONS_00009041-exon-sc0000089-1510915933:525210..525257 | TCONS_00009041-exon-sc0000089-1510915933:525210..525257 | Clytia hemisphaerica | exon |
| TCONS_00009041-exon-sc0000089-1510915933:523383..523939 | TCONS_00009041-exon-sc0000089-1510915933:523383..523939 | Clytia hemisphaerica | exon |
| TCONS_00009041-exon-sc0000089-1491911889:525210..525257 | TCONS_00009041-exon-sc0000089-1491911889:525210..525257 | Clytia hemisphaerica | exon |
| TCONS_00009041-exon-sc0000089-1491911889:523383..523939 | TCONS_00009041-exon-sc0000089-1491911889:523383..523939 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089 | supercontig | sc0000089:523383..525257 - |
Blast
The following BLAST results are available for this feature:
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