|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008994 ID=TCONS_00008994|Name=TCONS_00008994|organism=Clytia hemisphaerica|type=transcript|length=1459bp
tatcatttacCTTTTTGAAATGTAAAGAAATTAAAGATGTGATTTTTCTA
ACAAAATTGTGATTTTTCGTAATTTCATTTTTGGTGTCTAAAGCTTTGAA
ATTACTTTAAGTCAATCAAAAGTTTTAATTATcgcattgaaaaaaaaaaa
tacaaaatatactTCTATTTTATTTATTGAAGTGGTCTGACACTTGGGAC
ACACCCTGACACTTTGGAACATCCTGTATGCATCTAATTTCTTAAATATT
TCTTCCAAAGAATTACCCACTATAATATTAAAATACTCAAAATGGCTAAA
TGGGAAGCCTTAATTAAACCTGAAAAGGAAATAATTGAGCAGGTTGTTAG
TTTGACAAAAGAATCTAGTGAAGACGATTGGAAAGATGTTGTTAAAGAAA
TGGTGCACAAGGACCTTTTCAAGCGTTATCTTTGCAATTATGGAACAAAT
GAAAAGTCTCCCTTCCCAAGCAAAATGTGGACCATCCAACATCATGCAGC
TCACTTTAATGCTCCTATTGAAATAATCGAATTCATGGTTGAAAAGCACA
TTCCAATGTCTATCAAAGATGGTGAGGGCAAGACTCCAGCTGATCATCTT
GATGTAAATGTTGATTGCAATTATAAGGCATTGTTCATGCCTAGGTATGG
CCTTTCAAACTTAAATTTGGAGAATCtgcaaaagattgaagaaaatttcc
atGCTGTGATTAATGGAAGAGTCAAAGATTTGGTTGACAAGTATGACTTA
ATTCTCCCACAGTTATCTGTTTCCCTAGAAGTTCAAGTAGCTATAGAATT
TCTCGACAATGGATATTGTGCTATCCCTGGGATGTATGGTGGTTTCACAA
TTGAATTTCAGTTGAATGCAGATAAGAGTGATGTTAATCATCTCTTAACA
AGCAGTTATTGTTGGATAGCAGGTGGCTCTGGTCAAACACACAAATGTAC
ACCAGAGCAGTCAGAATTAATTGAATCAGATTTTGCATAATGTTGAAGTT
TAATATTCTACAGGAATTTTTTGTGCCTTTAGATTATTCTCTCGAGTAGT
TAAGTAttcaaattaatcaaaaatcCGATACATGTCGGGAAAAATGGAAG
TATAATAGCCACATATTTTTTCACTATTCaacaaattaataaaaaatttt
gaggaaggcaaatttttttctcagctaTTTAATTTACCATAAATAAATTA
GCACAATATTTATACATTCATTAATGAAAAACTGCTGCTGTCACCGATTA
TCAGCTGATTTTTTACTTTCATTGGGTTTGTGATTGAGTTTTTCTGACAA
GTCCCACTCATACCattatttgaaatgttttaattttgaaactaatactt
tcgcggggattaaattttgataGTATATAGTTTACGCTGTATTATTTTAA
TTTCTTGAAACTAAAAAACAATCTATTCCTACAAAGAAAATTAACAAACC
TAGCAAAAC Run BLAST on NCBI transcript from alignment at sc0000089:298888..300346+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008994 ID=TCONS_00008994|Name=TCONS_00008994|organism=Clytia hemisphaerica|type=transcript|length=1459bp|location=Sequence derived from alignment at sc0000089:298888..300346+ (Clytia hemisphaerica)
tatcatttacCTTTTTGAAATGTAAAGAAATTAAAGATGTGATTTTTCTA
ACAAAATTGTGATTTTTCGTAATTTCATTTTTGGTGTCTAAAGCTTTGAA
ATTACTTTAAGTCAATCAAAAGTTTTAATTATcgcattgaaaaaaaaaaa
tacaaaatatactTCTATTTTATTTATTGAAGTGGTCTGACACTTGGGAC
ACACCCTGACACTTTGGAACATCCTGTATGCATCTAATTTCTTAAATATT
TCTTCCAAAGAATTACCCACTATAATATTAAAATACTCAAAATGGCTAAA
TGGGAAGCCTTAATTAAACCTGAAAAGGAAATAATTGAGCAGGTTGTTAG
TTTGACAAAAGAATCTAGTGAAGACGATTGGAAAGATGTTGTTAAAGAAA
TGGTGCACAAGGACCTTTTCAAGCGTTATCTTTGCAATTATGGAACAAAT
GAAAAGTCTCCCTTCCCAAGCAAAATGTGGACCATCCAACATCATGCAGC
TCACTTTAATGCTCCTATTGAAATAATCGAATTCATGGTTGAAAAGCACA
TTCCAATGTCTATCAAAGATGGTGAGGGCAAGACTCCAGCTGATCATCTT
GATGTAAATGTTGATTGCAATTATAAGGCATTGTTCATGCCTAGGTATGG
CCTTTCAAACTTAAATTTGGAGAATCtgcaaaagattgaagaaaatttcc
atGCTGTGATTAATGGAAGAGTCAAAGATTTGGTTGACAAGTATGACTTA
ATTCTCCCACAGTTATCTGTTTCCCTAGAAGTTCAAGTAGCTATAGAATT
TCTCGACAATGGATATTGTGCTATCCCTGGGATGTATGGTGGTTTCACAA
TTGAATTTCAGTTGAATGCAGATAAGAGTGATGTTAATCATCTCTTAACA
AGCAGTTATTGTTGGATAGCAGGTGGCTCTGGTCAAACACACAAATGTAC
ACCAGAGCAGTCAGAATTAATTGAATCAGATTTTGCATAATGTTGAAGTT
TAATATTCTACAGGAATTTTTTGTGCCTTTAGATTATTCTCTCGAGTAGT
TAAGTAttcaaattaatcaaaaatcCGATACATGTCGGGAAAAATGGAAG
TATAATAGCCACATATTTTTTCACTATTCaacaaattaataaaaaatttt
gaggaaggcaaatttttttctcagctaTTTAATTTACCATAAATAAATTA
GCACAATATTTATACATTCATTAATGAAAAACTGCTGCTGTCACCGATTA
TCAGCTGATTTTTTACTTTCATTGGGTTTGTGATTGAGTTTTTCTGACAA
GTCCCACTCATACCattatttgaaatgttttaattttgaaactaatactt
tcgcggggattaaattttgataGTATATAGTTTACGCTGTATTATTTTAA
TTTCTTGAAACTAAAAAACAATCTATTCCTACAAAGAAAATTAACAAACC
TAGCAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008994-exon-sc0000089-1491911889:298888..300346 | TCONS_00008994-exon-sc0000089-1491911889:298888..300346 | Clytia hemisphaerica | exon |
| TCONS_00008994-exon-sc0000089-1510915933:298888..300346 | TCONS_00008994-exon-sc0000089-1510915933:298888..300346 | Clytia hemisphaerica | exon |
| TCONS_00008994-exon-sc0000089-1575043694:298888..300346 | TCONS_00008994-exon-sc0000089-1575043694:298888..300346 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089 | supercontig | sc0000089:298888..300346 + |
Blast
The following BLAST results are available for this feature:
|
