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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008991 ID=TCONS_00008991|Name=TCONS_00008991|organism=Clytia hemisphaerica|type=transcript|length=753bp
aaaacccaaaatgctataatttttcttaagccattaagtttacaattggg
cctacgaatgatttcaaagatactgaagttgagccagtgcggttagcacg
ttcgacagtagttaaatttcctaaaattaggTGGTTttttttagtactca
tgtactaaaatttttcttaaatttcttgaagaccccacctaatttgggat
tttagtatacatggtactaaaatacttttaggctttttttgtaataccac
cacgtcactaaaagtcatgatgtctgaaattttagtaccgaccccccccc
ctttctctTGTTCTTTTAGAGGTAACTAATTCACttgtattttctgagga
aaatcaATCacttgtatttcccaaggaaacaTTAATGTGATTTTTTAAAG
GAGTTATCTCCTTAAATCTACCTACCAGACTTTGACAACCAAAGAGATCT
TTTTGGTAAAAATGATGCATACAAGGGATGATTAACATACATCAACATTG
TAATAGCTGTTCCTCGAAACAACATCCTGTAATCAATTACTTGTTCCACT
TTAAAAGACAACATCACAAGCCAAAGGCTATGGAATTATTGACAAGCTGA
GATATTCATGACAACTCATTCCAGAATAATTCATTATCAGGTCAACATTC
AAAATGTTCAATGTCACCTCCAGTGTTCATATCTTGCATCCTATCAGCAT
GCTATCATCAAGGTACAGTCACAAATCCATTACACCACATACAAGCATAC
CAG Run BLAST on NCBI transcript from alignment at sc0000089:296331..297558+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008991 ID=TCONS_00008991|Name=TCONS_00008991|organism=Clytia hemisphaerica|type=transcript|length=1228bp|location=Sequence derived from alignment at sc0000089:296331..297558+ (Clytia hemisphaerica)
aaaacccaaaatgctataatttttcttaagccattaagtttacaattggg
cctacgaatgatttcaaagatactgaagttgagccagtgcggttagcacg
ttcgacagtagttaaatttcctaaaattaggTGGTTttttttagtactca
tgtactaaaatttttcttaaatttcttgaagaccccacctaatttgggat
tttagtatacatggtactaaaatacttttaggctttttttgtaataccac
cacgtcactaaaagtcatgatgtctgaaattttagtaccgaccccccccc
ctttctctTGTTCTTTTAGAGGTAACTAATTCACttgtattttctgagga
aaatcaATCacttgtatttcccaaggaaacaTTAATGTGATTTTTTAAAG
GAGTTATCTCCTTAAATCTACCTACCAGACTTTGACAACCAAAGAGATCT
TTTTGGTAAAAATGATGCATACAAGGGATGATTAACATACATCAACATTG
TAATAGCTGTTCCTCGAAACAACATCCTGTAATCAATTACTTGTTCCACT
TTAAAAGACAACATCACAACNTTTGGTAAAAATGATGCATACAAGGGATG
ATTGACATACATCAACATTGTAATAACTGTTCCTCAAAACAACATCCTGT
AATCAATTACTTGTTCCACTTTAAATGACAACATCACAAGCCAAAGGCTA
TGGAATTATTGACAAGCTGAGATATTCATGACAACTCATTCCAGAATAAT
TCATTATCAGGTCAACATTCAAAATGTTCAATGTCACCTCCAGTGTTCAT
ATCTTGCATCCTATCAGCATGCTATCATCAAGGTACAGTCACAAATCCAT
TACACCACATACAAGCATACCAGATAACATGAAATAACAATTCTGAAGCT
GATTATTTCTCATCTAGATCCAAAATGTCTTGGATTGGGTTCCTTCAATT
TCCAAATGAAGTCACACATTTGATCGAAAATATAATACCCAATTTGAATG
AAAAGGCTACAACAGAACAATGGAATGAATGTCTTNCATCACAAGCCAAA
GGCTATGGAATTATTGACAAGCTGAGATATTCATGACAACTCATTCCAGA
ATAATTCATTATCAGGTCAACATTCAAAATGTTCAATGTCACCTCCAGTG
TTCATATCTTGCATCCTATCAGCATGCTATCATCAAGGTACAGTCACAAA
TCCATTACACCACATACAAGCATACCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008991-exon-sc0000089-1491911889:296331..296892 | TCONS_00008991-exon-sc0000089-1491911889:296331..296892 | Clytia hemisphaerica | exon |
| TCONS_00008991-exon-sc0000089-1510915933:296331..296892 | TCONS_00008991-exon-sc0000089-1510915933:296331..296892 | Clytia hemisphaerica | exon |
| TCONS_00008991-exon-sc0000089-1575043694:296331..296892 | TCONS_00008991-exon-sc0000089-1575043694:296331..296892 | Clytia hemisphaerica | exon |
| TCONS_00008991-exon-sc0000089-1491911889:297368..297558 | TCONS_00008991-exon-sc0000089-1491911889:297368..297558 | Clytia hemisphaerica | exon |
| TCONS_00008991-exon-sc0000089-1510915933:297368..297558 | TCONS_00008991-exon-sc0000089-1510915933:297368..297558 | Clytia hemisphaerica | exon |
| TCONS_00008991-exon-sc0000089-1575043694:297368..297558 | TCONS_00008991-exon-sc0000089-1575043694:297368..297558 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089 | supercontig | sc0000089:296331..297558 + |
Blast
The following BLAST results are available for this feature:
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