TCONS_00008990 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008990
Unique NameTCONS_00008990
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1431

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008990 ID=TCONS_00008990|Name=TCONS_00008990|organism=Clytia hemisphaerica|type=transcript|length=1431bp
AGCGCACATTTTGCTGAGAAGCCCGAACTTCAGAATCGGATGGTGCAAGA
GTTCGAACCCCAGTAAAATCGTCAAATCTAAATaaGTGGTCTGACACTTT
GGGACACCCTGTATGCATCTAATTTCTTAATATCTCTGAATCTTCTTCCA
AAGAATTACCAACTATAATATTAAAATACTCAAAATGGCTCAATGGAAAG
CCTTAATTGAACCTGAAAAGGAAGTAATTGAGCGGGTTGTTAGTTTAACA
AAAGAATCTAGTGATGAAGAATGGAAAGATGTTGTTGAAGAAATGGCGCG
CAGGTATCTTTTCAAGCATTATCTTTGTAATTATGGAACAAATGAGGAGT
CTCCCTTCCCAAGCAAAATGTGGACCATCCAACATCATGCAGCTCACTTT
AATGCTCCTATTGAAATAATTGAATTCATGGTTGAAAAGCACTTTCCAAT
GTCTTTCAAAGATGGCGAGGGCAAGACTCCAGCTGATCATCTTGATGTAA
ATGTTGATTGCAATTATAAGGCATTGTTCATGCCTAGGTATGGcctttca
aatttaaatttggagaatctgcaaaagattgaagaaaatttccatGCTGT
GATTAATGGAAGAGTCAAAGATTTGGTTGACAAGTATGACTTAATTCTCC
CACAGTTATCTGTTTCCCTAGAAGTTCAAGTAGCTATAGAATTTCTTGAC
AATGGATATTGTGCTATCCCTGGGATGTATGGTGGTTTCACAATTGAATT
CCAGTTTAATGCAGATAAGAGTGATGTTGATCATCTCTTAACTAGCAGTT
GGTGTCGGATAGCAGGTGGCTCTGGTCAAACACACAAATGTACACCAGAA
CAGTCAGAATTAATTGAATCAGGTTTTGCATAATGTTGAAGTTTAATATT
CTTATAGGAATTTTTTATGCCTACTGTATTTTTAGATTATTCTCTTGTAG
TAGTTGAGTATTCAAATATAATAGCCATTCTTTTTCACTGTTCaacaaat
taatcaaaaattttgagaaaggcaaatttttttctcagctaTTAAATTCA
TCACAAACAAATTAGCACAATATTTATACATTCATTAAAGAAAACCTGCT
GCTGTCATCGATTATCAGCTGATTTTGTACTTTAATCGAGTTTGTGATTG
AGTTTTTCTGACAAGTCTCACTCATACCattatttgaaatgttttaattt
tgagactaaaaagtaattttaaacaaattttctcaaaccttattatttta
ttattagcACAATGTAAAAGAACTGAATTATGATTTTTATACTGACTTTT
TTTGTAATCTAATTTACATATTATTTACATTTACACACTATTTATTATTT
CTAAAGTAATCACTATTTTAATATATCTCTGCCTTATTGTATTGTAAACG
CATGTAtaatcttttataaaaacaaaatttc
Run BLAST on NCBI

transcript from alignment at sc0000089:290540..307938+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008990 ID=TCONS_00008990|Name=TCONS_00008990|organism=Clytia hemisphaerica|type=transcript|length=17399bp|location=Sequence derived from alignment at sc0000089:290540..307938+ (Clytia hemisphaerica)
AGCGCACATTTTGCTGAGAAGCCCGAACTTCAGAATCGGATGGTGCAAGA GTTCGAACCCCAGTAAAATCGTCAAATCTAAATGTAAGTATTCATCTCTT TTCAAACATAACCTATATTTTGTAAATCCTCCATTACATAAATTTAACAG AATGGTCGGTCGGATATGTTTGGACGATTTATTATTGAGTGTCACAAATC CTACTTTTTAATATTCATAAGTTGCTTTTTACTATTGCTATTGGATTCGA TTGGGATTGGTTTTcaaagaataagtttttttcaagtcagaagTTTATAA TAGTTGAAAGCTCCTAACTTAAATAAAGTCTAGTCAGAAAATTTTCTATA TACTATCTTTGCTTTCTGACTTCCCCCATCAGAATTATTAAAGAcaaaaa agtagttgagcttcAGTATATAAATAAAGTCttttccagacgatctcaat cgaacggaatcgacgatcgaaccagtcgaaccaaatcgaacgccatcgac cgattgaaattcgattgtggaacgcaatcgaatctcaattgaacgtcaaa attctcgGTAATaatcgattggttcgattgttgtttgacTGCATTCGATT GTCGTTCAACTGCGTTCGATTGCCGTTTAATCGCCTTTCGACTGCGTTTG ATTGCTCTATGCTCTAAAGAAGGCCAATTTTCCATCGTAAATAAAAGAAG AGTGTTTTTCAGTACTTggcaagaaaatagagcaaattttatggatttta ttTTATGGATAGCAAAACAGATGCGTGTGCATTAGGTATTTGATGCCCCA TTTGACATATTTTCAGTGTTTTCAAACTATGCTCAGCAGTTCAAACTCAG ATAATTCTCTTGGTCCAACAACCCTGTTGATGCAGCAGACTGTCCAGGAC TGCCTTTTAAGGGCAATAAAAAAGCATTGTTAGAACAAACAAATGAAAGT AACAGAGAAAGGTGCAGAAGCGTGGTGGCTCAACCAAAATTCAGGCAAAC TGGAGAGGcaatttgtgaaaattttgattttggcgccccctattaaaagt aaatattttattCGCAAACACCAAAATCTTTGGGTACTTTCTCTCTTTTA GGTCAAAAACTGCCAGGTGTAACGGTGTAACAAGCAAATTAGTGATAAGA GGCGCATTTTGGCACTCCCCAAAAATATCGGTCGCTGGGGGGTGCACTAC CCCCTGCCACCATGCCACCATGCTACTGGTCGTTTCCCaccaccaaaaat caaaattttttcagttcCCCTAGgtccccccctcttttttgccttCCCCC AGTTATTTGACAATTCTGCGGTTCTCCCATAttgttaacataaaaatgct ttaaatcaagtttaaaaTTTTGGAAAGTTTGTAAATATAGCCTTGAAGCT GCTTGAAAatgaagttttattgaaaaattggtttTGTTCAAGTAAggttt gctgattttattgcaTAAACAGGTCTTCTATGAGACTACGTTGAGATCAG TAAagttcaatcaaaatttccaaaatttattgtttattttctcCCTTcca atttccaatttttcattttcccccataccTCCAAAAATGGGGCAAAATCT ATTCCTACAAAGAAAATCAACGAACCAAGCAAAACACACATACAAGTTTT GTATTTCTGAtgcttaaaaagaaaattcaagacagtaagaaaattctaaa aattttacaaaaagaaattttgcagcCGGCCagataagtttttttttcaa acgcATTTccagaaacaattttttttggccTTCATACTTGTCTGAAATAT tcagttcaaaatttttttcttaaattcttcCACAGCACAAACAACATTTT TTAGGCCTGTCttctctcaaaaaagttcacccTGTCGATTTCTGGAAACA AGACAATCTTTATTTTTGCCTTACATCTAGCGTTTGGATTGTCCTgtggt aaaaattttgaaaattcaacacCAGAAATTTCGTATCTTATGCTTCCATA AGTCCAGTGTGACAGCAGAGTTGTTTGGTTCAGTAGTTTTGCAGAATGTT AAAAAATGGGCATTGAATAGGAGACTCTTGCATGTCAAAATTCTCATACA CCTCTCTGCAATGTGCAGAGTGTTTCACACATCTCCAACATTTACCATAT CTATAATATCATTTAAGTAGTTTTGCAGAATGTTAAAAAATGGGCATTGA ATAGGAGACTCTTGCATGTCAAAATTCTCATACACCTCTCTGCAATGTGC AGAGTGTTTCACACATCTCCAACATTTACCATATCTATAATATCATTTAA GTAGTTTTGCAGAATGTTAAAAAATGGGCATTGAATAGGAGACTCTTGCA NgggggggggggggcactacAGTTATTTGACAATTCTGCGGTTCTCCCAT ATTGTTAacataaaaattctttaaatcaagtttaaaatttttggaaagtt tgtaAATATAGCCTTGAAGCTGCTTGAAAatgaagttttattgaaaaatt ggtttTGTTCAAGTAAGGCTTGCTGATTTTATTGCATAAACAGGTCTTCT ATGAGACTACGTTGAGATCAGTAAagttcaatcaaaatttccaaaattta ttgtttattttctcCCTTccaatttccaatttttcatttcCCCCCATACC TCCAAAAATGGGGCAAAATCTATTCCTACAAAGAAAATCAACGAACCAAG CTTTATTTTTGCCTTATGTACATCTAGCGTTTGGATTGTCCTgtggtaaa aattttgaaaattcaacacCAGAAATTTCGTATCCTATGCTTCCATAAGT CCAGTGTGACAGCAGAGTTGTTTGGTTCAGTAGTTTTGCAGAATGTTAAA AAATGGGCATTGAATAGGAGACTCTTGCATGTCAAAATTCTCATACACCT CTCTGCAATGTGCAGAGTGTTTCACACATCTCCAACATTTACCATATCTA TAATATCATTTAAGTAGTTTTGCAGAATGTTAAAAAATGGGCATTGAATA GGAGACTCTTGCATGTCAAAATTCTCATACACCTCTCTGCAATGTGCAGA GTGTNgggggggggggggcactacAGTTATTTGACAATTCTGCGGTTCTC CCATATTGTTAacataaaaattctttaaatcaagtttaaaatttttggaa agtttgtaAATATAGCCTTGAAGCTGCTTGAAAatgaagttttattgaaa aattggtttTGTTCAAGTAAGGCTTGCTGATTTTATTGCATAAACAGGTC TTCTATGAGACTACGTTGAGATCAGTAAagttcaatcaaaatttccaaaa tttattgtttattttctcCCTTccaatttccaatttttcattttccccca taccTCCAAAAATGGGGCAAAATCTATTCCTACAAAGAAAATCAACGAAC CAAGCAAAACACACATACAAGTTTTGTATTTCTGAtgcttaaaaagaaaa ttcaagacagtaagaaaattctaaaaattttacaaaaagaaattttgcag cCGGCCagataagtttttttttcaaacgcATTTccagaaacaattttttt tggccTTCATACTTGTCTGAAATATtcagttcaaaatttttttcttaaat tcttcCACAGCACAAACAACATTTTTTAGGCCTGTCttctctcaaaaaag ttcacccTGTCGATTTCTGGAAACAAGACAATCTTTATTTTTGCCTTACA TCTAGCGTTTGGATTGTCCTgtggtaaaaattttgaaaattcaacacCAG AAATTTCGTATCTTATGCTTCCATAAGTCCAGTGTGACAGCAGAGTTGTT TGGTTCAGTAGTTTTGCAGAATGTTAAAAAATGGGCATTGAATAGGAGAC TCTTGCATGTCAAAATTCTCATGCACCTCTCTGCAATGTGCAGAGTTTCT CACACATCTCCAACATTTACCATATCTATAATATCATTTATatcatttac aaattttgtaatATCACAGAAAAAAGCCCCAGGTTTGGaatgaaaacaac caaaaacaccaTTTCTCAAAGCCAAAGACCATAAAGTTCTCTAATGCATT TGCATTTGCACCGACTAATATTAATCCTGAGAAAATAGCATCACAGGCTA GCTCTCAATTGTGAATGTCGCttgtttgtattttccaaggaaaatgatTC AGTCGTATTAATCTAGGTATGATTCCCTTGTATTCCCAAAGGAAAATGCT TCTcatgcagggggggggggtcggtactaaaatccaagacatatatgagt actacaagttttttgacaatttttgacatacccccacctaattTTTGAAT TGACATTTTAGCATAGTGACCACCTAAATAAGGCTTATTTTGGAATTCCG TTTGAAGAATGCAGGTCTttggactttcaacaaaatgccAACTCTGGTTA TTTAAGCTGTCAATGAACCTGATCTATCTCTATCTCTTCTAGATAAAGAC TCAGAAACAGTCAAGACACTTTTGCTCTGCTCTACTTTAGTTATTGCAAA GATTGTTTGGTTATTTTTCACCTCTAATTTACagcttgttattttttttc tatccagttatccacggttctttacaaaaaaacaaagcattcaacttcga aaacattttttattccataGTATATAAAAGCAGAACAATTAAATTGAAAC ATGGGTGTTTCACAGCCCCAAAggaacctttttcctcagttgagataaaa tttcctattgagatgctaatggggatagaaattctattgttccaaggtta aaaactcAGTGGGgatatggttttggagtgcaatttttaaacatggaatt ttgagttgggatgaaatcaaagtctattttcaagtggggctgaaattcaa gagTATTTTACCAcaggggacaaaatttttgcttaatttgtgacacaggg acgtatttaaatcttatatagagagtttttattttttaattttgcctaTA ATGCTCAGTCAATTCTCAACTTcaattgagctagaatctgagaatgtctg tctgtgtgtgtgtctgtgtgtgtgtctgtcaccaaaactttggggcagac tggagacttcaaaaatggtccgattgggctgaaattttgcacacttgatc cttgggcaaatccctgggggttgtttttttcattttttcaaaattttaat tttttggggcctggggacgagttttttgccaaaacgaggctaaaactttg gggcaggctggagacttcaaaaatggtccgatttggccgaaattttgcac acttgatccttgggcaaatccctgggagtgtttttttcattttttcaaaa ttttaatttttggggcctagggaCAGGTTTTCGCCAaaatgaggctaaaa ctttggggcaggctggagacttcaaaaatggtccgatttggctgaaattt tgcacacttgatccttgggcaaatccNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNttcgccaaaacgaggctaaaactttggggcagg ctggagacttcaaaaatggtccgatttggctgaaattttgcacacttgat ccttgggcaaatccctgggggcctttttttcatttttttcaaaattttaa tttttggggcctgtagacgagtttttcgccaaaacgaagctaaaacccaa aatgctataatttttcttaagccattaagtttacaattgggcctacgaat gatttcaaagatactgaagttgagccagtgcggttagcacgttcgacagt agttaaatttcctaaaattaggTGGTTttttttagtactcatgtactaaa atttttcttaaatttcttgaagaccccacctaatttgggattttagtata catggtactaaaatacttttaggctttttttgtaataccaccacgtcact aaaagtcatgatgtctgaaattttagtaccgacccccccccctttctctT GTTCTTTTAGAGGTAACTAATTCACttgtattttctgaggaaaatcaATC acttgtatttcccaaggaaacaTTAATGTGATTTTTTAAAGGAGTTATCT CCTTAAATCTACCTACCAGACTTTGACAACCAAAGAGATCTTTTTGGTAA AAATGATGCATACAAGGGATGATTAACATACATCAACATTGTAATAGCTG TTCCTCGAAACAACATCCTGTAATCAATTACTTGTTCCACTTTAAAAGAC AACATCACAACNTTTGGTAAAAATGATGCATACAAGGGATGATTGACATA CATCAACATTGTAATAACTGTTCCTCAAAACAACATCCTGTAATCAATTA CTTGTTCCACTTTAAATGACAACATCACAAGCCAAAGGCTATGGAATTAT TGACAAGCTGAGATATTCATGACAACTCATTCCAGAATAATTCATTATCA GGTCAACATTCAAAATGTTCAATGTCACCTCCAGTGTTCATATCTTGCAT CCTATCAGCATGCTATCATCAAGGTACAGTCACAAATCCATTACACCACA TACAAGCATACCAGATAACATGAAATAACAATTCTGAAGCTGATTATTTC TCATCTAGATCCAAAATGTCTTGGATTGGGTTCCTTCAATTTCCAAATGA AGTCACACATTTGATCGAAAATATAATACCCAATTTGAATGAAAAGGCTA CAACAGAACAATGGAATGAATGTCTTNCATCACAAGCCAAAGGCTATGGA ATTATTGACAAGCTGAGATATTCATGACAACTCATTCCAGAATAATTCAT TATCAGGTCAACATTCAAAATGTTCAATGTCACCTCCAGTGTTCATATCT TGCATCCTATCAGCATGCTATCATCAAGGTACAGTCACAAATCCATTACA CCACATACAAGCATACCAGATAACATGCAATAACAATTCTGAAGCTGATT ATTTCTCATCTAGATCCAAAATGTCTTGGGTTGGGTTCCTTCAATTTCCA AATGAAGTCACACATTTGATCGAAAATGTAATACccaatttgaatgaaaa agctACAGCAGAACAATGGAATGAATGTCTCTATGGTCTAAAGAAATACA GAAAACACTACATTTGGAATGAAGACATAAAAAATGATCAAAGAGTTTAT CCAAGTAGGCGCTGGACCATCGTCCATCATGCCGCTTATTTCAAAGCACC TTTACCAATTGTCCAGAAGATGGCTATCGATCAATATCCTCTTTCATTAC CAGACGGAGAAGGAAAGTTACCAATTGATCATTTGGATTCAGGCAcgcca aaaaatatcaaagcttTGTTTTCACCATCTTACAAGATGAATTTCCTTCA CTTGGAGATGAAATTGTTGCAGGCAAATTTTCATGAAGTCATTCTGGAAA GAGTTGCTTCATTGGTTCAGAAGTATAATGTGATTTTACCAATCCTGTCA GTCCTTTTAGAAGACGTTTCAAAGGATAAAGAAGTTTACTTCAATATGCC TGGAATGTATGGTGGATTCACATATTGGCTTGAGTTTGATTCTTCTAAAA CAGAAATTTTGGCATTGTATTCACGGAGTTCTTCAAGGCTTGTTGGTAAT TCAGAACAGTTACATAAGTGCACCAAAGAAGGATGGACACTGGTCAAAAG TGACAAGTAATGGTTTCCTTAATCTTAAGATTTATTTTCTCTTTAGTTTT ATAGCTTTGTTTTTAAGTTTAATTATACATCtgcttcatttaaaaatttc ttcattataACTTTCCCTGtgagaaatcttttaaaagtcaTTATCTTATT GTGTTAAAGTTTAAATTTATCTACAAACAAATACAAACTCTTATTTTATG CCTAATTTTTAATGATTGACTCTCCAAGCAATTTGAAATACCTGAAAATT TAACCAGTTTTGGGGCAGTCTTTTAAGGGACAATAGTAAATGACCTGTTG AGATTAAGACTGGCTCTATCAACTCTtaagaatctttaaagaaattggTT GTCGATGTCATTGTTTAGTAAAAGCGTTTTGTAATCTGTCCAAATCAGAT TTTTGATGGTCCAAAGGCTGACCTGAAAAGTAATCAGATTTTGAATTTCC ACTCTCAAGGTTTTGGACCTTTATTTATTCAAACCTAATTTAAACCCTAT TTAGACataaatttatttaaaacaaatttatttattgCAAATAATTATTA gtaacattttcttttcttttatgcTTAATTATTTACCgaaatttatttta tcatttacCTTTTTGAAATGTAAAGAAATTAAAGATGTGATTTTTCTAAC AAAATTGTGATTTTTCGTAATTTCATTTTTGGTGTCTAAAGCTTTGAAAT TACTTTAAGTCAATCAAAAGTTTTAATTATcgcattgaaaaaaaaaaata caaaatatactTCTATTTTATTTATTGAAGTGGTCTGACACTTGGGACAC ACCCTGACACTTTGGAACATCCTGTATGCATCTAATTTCTTAAATATTTC TTCCAAAGAATTACCCACTATAATATTAAAATACTCAAAATGGCTAAATG GGAAGCCTTAATTAAACCTGAAAAGGAAATAATTGAGCAGGTTGTTAGTT TGACAAAAGAATCTAGTGAAGACGATTGGAAAGATGTTGTTAAAGAAATG GTGCACAAGGACCTTTTCAAGCGTTATCTTTGCAATTATGGAACAAATGA AAAGTCTCCCTTCCCAAGCAAAATGTGGACCATCCAACATCATGCAGCTC ACTTTAATGCTCCTATTGAAATAATCGAATTCATGGTTGAAAAGCACATT CCAATGTCTATCAAAGATGGTGAGGGCAAGACTCCAGCTGATCATCTTGA TGTAAATGTTGATTGCAATTATAAGGCATTGTTCATGCCTAGGTATGGCC TTTCAAACTTAAATTTGGAGAATCtgcaaaagattgaagaaaatttccat GCTGTGATTAATGGAAGAGTCAAAGATTTGGTTGACAAGTATGACTTAAT TCTCCCACAGTTATCTGTTTCCCTAGAAGTTCAAGTAGCTATAGAATTTC TCGACAATGGATATTGTGCTATCCCTGGGATGTATGGTGGTTTCACAATT GAATTTCAGTTGAATGCAGATAAGAGTGATGTTAATCATCTCTTAACAAG CAGTTATTGTTGGATAGCAGGTGGCTCTGGTCAAACACACAAATGTACAC CAGAGCAGTCAGAATTAATTGAATCAGATTTTGCATAATGTTGAAGTTTA ATATTCTACAGGAATTTTTTGTGCCTTTAGATTATTCTCTCGAGTAGTTA AGTAttcaaattaatcaaaaatcCGATACATGTCGGGAAAAATGGAAGTA TAATAGCCACATATTTTTTCACTATTCaacaaattaataaaaaattttga ggaaggcaaatttttttctcagctaTTTAATTTACCATAAATAAATTAGC ACAATATTTATACATTCATTAATGAAAAACTGCTGCTGTCACCGATTATC AGCTGATTTTTTACTTTCATTGGGTTTGTGATTGAGTTTTTCTGACAAGT CCCACTCATACCattatttgaaatgttttaattttgaaactaatactttc gcggggattaaattttgataGTATATAGTTTACGCTGTATTATTTTAATT TCTTGAAACTAAAAAACAATCTATTCCTACAAAGAAAATTAACAAACCTA GCAAAACACATACAAGTTTTGTATTTCTGatgcttaaaaagaaaaatcaa gactgtaaaaaaaaatctaaaaatctaaaatgaaaatattttgcagcCAA CCAGTttaatgtaaagagatggaaaaacagcttcttcagAACAATAGACA AACGGCTtgtcatataccaggtcctttgcccttaagggagtttgtttcga gctacatgttttttttataagcattgcacttataagcatatctaggctca gatatggggaaaaattaagcatatcgCAAGCATTAATTgggcctacgaaa aatgtttttttcctgattgggcccttccagaaaaaatccgttcatggggg gtggaggatgaattgtccaggggtattgaaaaaataccaaaaaattgcaa tgtccagggggtgaattccaatgtccaggggtaattttttgtgtccacgg gattgatttgatgtttgtccaggggtataacccatgttcagggggttaaa aatcaaaatgtccaggggtaattcatgaagaaaataatatatcctccacc ccccatgaacggattttttctggaagagcccattttggctttttttggct ggaattttacggattttcagtatttccctaaatttatgctttggATTTAA GCATCCCttaagcatttttcagctttattaagctttcgacctaagcatct ctgagcctgttttcggatttttgtatggttaggcaattacttttttattt tctggtttacggacattataaggaaaagttttggacaggaggatggaaaa aaaataaaaataaaattgatgtttaaaattttttttatttcctttttaaa aatctgaaatcggaggaaagaataaaataaaatttcatgaaatttcctAA AGTAtagattttttagatttaaagacaaaagaatAGATGCAAGAAAAGTG CAAAATGTTGTTATAGATAGAGTCTATggataaaaaacactaaaaataaa CTGAACCATAAAAATGTACACATAAAGACTGATATGTGTATATGTTAAAC TGACAAAGGTTCCCATTTAGGGTTCACCCCtagggttcccactttagggt tcccacttaggttcccccatcccattTTTCTGGTATGCCTATTTTTATAT CTACTCTTGAATTTTAACAATCACATCAGGGGGGGTCAAGCCTCAGGGTA CTAAAGCATAGCCTAGAGAGGGTACTTatctaaaaaagtttttgactCAT ACCACCCACCCAaataagtacccgggtacttaaggACTTTTCCTTCTTAG ACCCTATacctacaaaaaataaatttattactTATTAATCTTTCTCAATT CTACACTCATCAAAATTAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN GGCTCCCCAcccacccaaaaagtacccgggtacttatcaaattttttttg gaaaaacaccCACCCCACCGGCTATGCTTTAGTACCCTGAGGCTTGACCC CCCCTGATCACATAAAGAACTTTAAATAAAAGCGattacaaaagaaagaa aaaaaatgaagaaaagtttgtttttttgtggaTAGGGAAATTCCATAGGG AAGTTCCCTGACATTAAGGGAAGGATCAAAGTATCTTTACATTGGCAGAA TAGGGCACAGCTGTGTTAGATCATTTAACTCCCTCTCTCTcattctcttc ttttcttttgttttcctgttttaAGTAtaggttttttatttatttcttct tttttgaaggtcggaggagaaaaagtaaataaaagtttttgaaatctcta ttttattatttttttattttggcaaaaataacgtCGGCGGATCCataaac caataaataaaaaagtatttgccttataaaaaaaaaacatgtaatggatt tcttttgttgttgctttaaaaaagttgtataattaGCGTGGTATGACGAA ATTCTTATGTTTTAGGTCGAATTATGCATAAACTttaggggcttatattt tggggagacctcttttatatcaaaagatacctatattttcttgctcagaa ttttctaGCAATTCTAATGATACAAGGGCTATAATGAAAATTTCCTTCCG ACACTAAATTTTTCCAGAGAGGTGTACAAATGGTGcaaaatctaagaaaa attaGGACCTGCCTTGGTATTAAATGTCATTTTCCCATAGCATAAGCCTA ATTAAAACTAAATCAAATATTAACGGGtgtttttgtaaactttttattAT TGACCTAAATGATGACCAATTTTCAAATAGCCCCTATAACAGCATCATGA CTGCATAATTATATTAAAAGCTAACAAAGTGcacgaaaataagaaatcaa atctgtctttgatgaatttctatcaaagtttttagaaataatttggtatc attgtgatgagaatttttcagACTTCAATTGTGAATGGTGTttgtttgta ttttccaaggaaaagaaaatttgtattttccaaggaaaatgataCAATTG TATTATCCTAGGAAAATGATTCCCTTGTATTCCCAAAGGAAAATGCTTCT CTTGTTCTTTCCAAGGTAACTTTCACTTGTATTCACttgtattttctgag gaaaatcaATCacttgtatttcccaaggaaactTTGTTGTGGTGTTTTAA AGGAGTTAAATCTACCTACCAGACTTTGACAACCAAAGAGATCTTTTTGG TAAAAATGAAGCATACAAGGGATGATTAACATACATCAACATTGTAATAA CTGTTCCTCAAAACTACATCCTGTAATCAATTACTTGTTCCACTTTAAAA GACAACATCACAAGANCCTCAAAACAACATCCTGTAATCAATTACTTGTT CCACTTTAAATGACAACATCACAAGCCAAAGGCTATGGAATTATTGACAA GCTGAGATATTCATGACAACTCATTCCAGAATAATTCATTATCAGGTCAA CATTCAAAATGTTCAATGTCACCTCCAGTGTTCATATCTTGCATCCTATC AGCATGCTATCATCAAGGTACAGTCACAAATCCATTACACCACATACAAG CATACCAGATAACATGAAATAACAATTCTGAAGCTGATTATTTCTCATCT AGATCCAAAATGTCTTGGATTGGGTTCCTTCAATTTCCAAATGAAGTCAC ACATTTGATcgaaaatataatatatacccaatttgaatgaaaaagctACA ACAGAACAATGGAATGAATGTCTTTATGGTCTAAAGAAATACAGAAAACA CTACATTTGGAATGAAGACATAAAAAATGATCAAAGAGTTTATCCAAGTA GGCGCTGGACCATCGTCCATCATGCCGCTTATTTCAAAGCACCTTTACCA ATTGTCCAGAAGATGGCTATCGATCAATATCCTCTTTCATTACCAGACGG AGAAGGAAAGTTACCAATTGATCATTTGGATTCAGGCAcgccaaaaaata tcaaagcttTGTTTTCACCATCTTACAAGATGAATTTCCTTCACTTGGAG ATGAAATTGTTGCAGGCAAATTTTCATGAAGTCATTCTGGAAAGAGTTGC TTCATTGGTTCAGAAGTATAATGTGATTTTACCAATCCTGTCAGTCCTTT TAGAAGACGTTTCAAAGGATAAAGAAGTTTACTTCAATATGCCTGGAATG TATGGTGGATTCACATATTGGCTTGAGTTTGATTCTTCTAAAACAGAAAT TTTGGCATTGTATTCACGGAGTTCTTCAAGGCTTGTTGGTAATTCAGAAC AGCTACATAAGTGCACCAAAGAAGGATGGACACTGGTCAAAAGTGACAAG TAaaagttttcctttttcttaatatttagTTTCTTTTTAGTTCCTAGAct tattttaataaatttgatTATAATACATTTGCTTCATTTAAAAGTTACTT CATTACAAATTTCTTTGtgagaaatcttttaaaagttatTATCTTATTGT GTCAAAGTTTaaatttatgtaaaaacaattataaacaCTTAATATTTTAT GCCTAATTTTTAATAAGTGACTCTCCAAGCAAttttaagtacctgaaaat ttAACCAGTTTTTGGGCAGTCTTTTAAGGGACAATAGTAAATGATCTGTT GAAATTAAGACTGGCCTCTATCAACTCTTAAGAATCTTTAAAGGAATTCG TTGTCAATGTCATTGTTAGTAAAAGCATTTGGAATCCGTCCAAATCAGAT TTTTGATGGTCCAAAGGCTGACCTGAAAAGTAATCGGATTTTGAATTTCC ACTCTCAAGGTTTTGGACCTTTATTTATTCATGAAGGTAATACAGataca gatggagagaaaacgtctcggtaatgacctaaatggtcgttgaaatcttt tataaatctattcaaagcggcttttctttgatgtaccatcattggaagca aaaacatcaatttataacttcNNAAGAGGCTGgtccgttgattttgaaaa atttaattttgcgagaaatcttagttaaaatgcgattcgaaatagtttca actgatttaaggataaaagaatatattaattttataaggatatatttttg ggctggcattttgtgaacattgagagtcgcatcacattatcattgaaagt ttcttatcttaaaatcttcacgtctaagtgggcagcggttttcatactct tacaaaatgatcgatacaaggttcctaatcgtaacctgtcgtaacacgta attctttttaaaatctatcgatggctttatgggtagcttcccctagaagt ttggagtattgtgcttattatgtgaagtttttttcaatttttcatgacgt AAGGCTATTataatatttcaatatacttgttaaaaatgtaatgtcttttc attcatcttgaATATTCctacgagtatacccaaaatttatcatcttattc ccaaagcaaccaaacagctgtttgcttccgatgataaatcagaatagaac aaaaggcattgagtctccatctatctttattaccttcatgattTATTTAA ACCTAATTTAAACCTTATTTAGACCtaaatttatttgaaacaaaCTTGTT TGTTGCAAATAATTATTAATAacattttctttacttttatgcATAATTAT TTACCgaaatttattttatcaatACCTTTTTGAAATGTAAAGAAATTAAA GATATGCTTTTTGTAACAAAATTGTGATTTCTTGTAAACgtaatttcatt ttcagtgtataaaactttgaaattgctttcagtcaatcaaaagttttaat taccattgcaatgaaaaagaaatacaaaatattttttttttttatttaca gaaGTGGTCTGACACTTTGGGACACCCTGTATGCATCTAATTTCTTAATA TCTCTGAATCTTCTTCCAAAGAATTACCAACTATAATATTAAAATACTCA AAATGGCTCAATGGAAAGCCTTAATTGAACCTGAAAAGGAAGTAATTGAG CGGGTTGTTAGTTTAACAAAAGAATCTAGTGATGAAGAATGGAAAGATGT TGTTGAAGAAATGGCGCGCAGGTATCTTTTCAAGCATTATCTTTGTAATT ATGGAACAAATGAGGAGTCTCCCTTCCCAAGCAAAATGTGGACCATCCAA CATCATGCAGCTCACTTTAATGCTCCTATTGAAATAATTGAATTCATGGT TGAAAAGCACTTTCCAATGTCTTTCAAAGATGGCGAGGGCAAGACTCCAG CTGATCATCTTGATGTAAATGTTGATTGCAATTATAAGGCATTGTTCATG CCTAGGTATGGcctttcaaatttaaatttggagaatctgcaaaagattga agaaaatttccatGCTGTGATTAATGGAAGAGTCAAAGATTTGGTTGACA AGTATGACTTAATTCTCCCACAGTTATCTGTTTCCCTAGAAGTTCAAGTA GCTATAGAATTTCTTGACAATGGATATTGTGCTATCCCTGGGATGTATGG TGGTTTCACAATTGAATTCCAGTTTAATGCAGATAAGAGTGATGTTGATC ATCTCTTAACTAGCAGTTGGTGTCGGATAGCAGGTGGCTCTGGTCAAACA CACAAATGTACACCAGAACAGTCAGAATTAATTGAATCAGGTTTTGCATA ATGTTGAAGTTTAATATTCTTATAGGAATTTTTTATGCCTACTGTATTTT TAGATTATTCTCTTGTAGTAGTTGAGTATTCAAATATAATAGCCATTCTT TTTCACTGTTCaacaaattaatcaaaaattttgagaaaggcaaatttttt tctcagctaTTAAATTCATCACAAACAAATTAGCACAATATTTATACATT CATTAAAGAAAACCTGCTGCTGTCATCGATTATCAGCTGATTTTGTACTT TAATCGAGTTTGTGATTGAGTTTTTCTGACAAGTCTCACTCATACCatta tttgaaatgttttaattttgagactaaaaagtaattttaaacaaattttc tcaaaccttattattttattattagcACAATGTAAAAGAACTGAATTATG ATTTTTATACTGACTTTTTTTGTAATCTAATTTACATATTATTTACATTT ACACACTATTTATTATTTCTAAAGTAATCACTATTTTAATATATCTCTGC CTTATTGTATTGTAAACGCATGTAtaatcttttataaaaacaaaatttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005035XLOC_005035Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008990-exon-sc0000089-1491911889:290540..290622TCONS_00008990-exon-sc0000089-1491911889:290540..290622Clytia hemisphaericaexon
TCONS_00008990-exon-sc0000089-1510915933:290540..290622TCONS_00008990-exon-sc0000089-1510915933:290540..290622Clytia hemisphaericaexon
TCONS_00008990-exon-sc0000089-1575043694:290540..290622TCONS_00008990-exon-sc0000089-1575043694:290540..290622Clytia hemisphaericaexon
TCONS_00008990-exon-sc0000089-1491911889:306591..307938TCONS_00008990-exon-sc0000089-1491911889:306591..307938Clytia hemisphaericaexon
TCONS_00008990-exon-sc0000089-1510915933:306591..307938TCONS_00008990-exon-sc0000089-1510915933:306591..307938Clytia hemisphaericaexon
TCONS_00008990-exon-sc0000089-1575043694:306591..307938TCONS_00008990-exon-sc0000089-1575043694:306591..307938Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089supercontigsc0000089:290540..307938 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.16747 1.88109 1.47275 0 8.85995 4.20075 1.68934 4.74462 15.5445 14.4488 16.1204 12.1412 12.0015 8.32335 2.73203 2.49635 4.04671 7.235 5.5516 9.92923 9.65854 11.4305 9.29688 7.14264 2.11616 2.51816 3.61797 1.92287 5.34096 3.61276
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008990 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top