TCONS_00008973 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008973
Unique NameTCONS_00008973
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1929

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008973 ID=TCONS_00008973|Name=TCONS_00008973|organism=Clytia hemisphaerica|type=transcript|length=1929bp
ataaagaaaagcgcttaatagcttttttatttctttttcaaaaatctttt
tcaatagtgttgatagtttctctcaatagatatgctttcattttctttat
ttttttgtattttgaccagttatgtcttatgtgtttcattgttcactgat
tagtttgataaccaggtaggtccataaaagtatcgcttgtttacTTTACA
AactttctacattttttaataaatctACATTTATCTCAGCAAAATTTCTG
ATGTATCAGCATAAACTACAAAAAAACCAACTATTtctgtttcaatattt
tctttatttacagGGGCCTTAATAAAATTATGATAGACCAAAAAATACTT
TAGTGATTCGATATGGATGAGAATagagagaagaaaaaaagaaagaagaa
gaatgaTACACCTCCACCAAGGTCTTCTCCACCTCCATCTTTGAAGCCAT
TCACCATCCCAAAGACTGGGAACAAAGATTTATTTACTTCTTTGAGTCTG
GACTCGCATGATGCAAAAGATATCGTTAAAAACATCAACAACACACTTTG
GGACAGAGCAACTACTACAATAAATgtaatcaaaatagaaaaagttcAGA
ATTCGCTTTTTCAAAGTGAGTATGatgcaaaaagaaaagaattcaaAGAG
AAGAAATATACAACATCTGAAACAACTGACTCTTAtggatttttgttttt
caaaaatattgcaGAGTGCAAGACAGCTTGTTCTGATGGAATCATTCGTG
GTGACCAAAGATTGCCATCAACTGCAGGTTATTGCCTTGGTGATAAAAAA
TATGGAATATATCTATGTCGTTGTGCAGATATTTTGAATACTCTCCCTCT
ATGGGAGAAAGATAACGTTATTGTTTTGGTTTGCAAATTCATGAAGGGAA
AGACAAACACTGTCAATGAGAATACAAATTCAACGATAGAACCCTCCCCA
GAATTTGATGCTCATACATCAAAGTCTTTTCAAAGAGGAAAAAAGTGGAC
ACATACAAAAATTTATAACACCTCACAgATTTATCTTTACGAAGTTGACT
TGGATAAGTTTtctgaagaagatgaagatgCAATATACGCTAAACGCCCT
CGTCAATGTTTACCTTACGCCATCGCCACCTTTCGTGTTCAGCAAAATGT
ACAACCCTCTGTTATAACTAAAGGACCAGTTACTCAAAAGTCTGCAGCAG
CTAAGCAAttaCCTTCAACAATGCAACCGGTCGCTGTTCCTCTTCCAAGC
AATCAAGCCCCAACAGTGACTGACTTTGCAGCTCTGGTAGGAAATAACCG
TCAAGTTTGGTCTGGCAATTACTACAATAATAATGTATCCTATGGACAAA
TCCGGCTCTGTATGTATTCAAAAGACATGAACAACCTCGCTCTACCAATC
GACGGtaCTTCATTGTGTGTCACACAGAAAATATCAATTGCGAAATTGGA
AAGTGTTTTACCGCAGAAAATCTTTCGCAAATGTCCCTGTTTGAATATGA
GATATGCAGAAACGGTAGAAAATGAGCGTTTTCTTCACGCGGAGATCCAT
CCGGAAGCTGTCATGTCAAACAAGTTCGAACACCTTCATCAACATCTACT
GCAATCCGAAATGGCAGGAATGAGTACCATTCGCCCTGGTTTGAAAATGT
TCGTCATACCAACCGGTGAATACACACACAAAATTGGTATCACTGGTCCT
GGCTACCCTCCCATCCTTCACTGTCTCTTCTTGAAACCGTTCAAAGattg
tgacgtcatcatcgAGAATCGTGACAACGTGTTCCAAGATTTCAAGAAAC
GAATCTTTGACTGTCTCATCGAACGCTTGCATCAAAATGAACAACTCAAA
AgtcaaaagtccaaaaacccttCGCCTATTACCAAATATAAGAACGGATA
TTCGATGGACCAGCGCAAAAAGATCATCA
Run BLAST on NCBI

transcript from alignment at sc0000089:215010..227481+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008973 ID=TCONS_00008973|Name=TCONS_00008973|organism=Clytia hemisphaerica|type=transcript|length=12472bp|location=Sequence derived from alignment at sc0000089:215010..227481+ (Clytia hemisphaerica)
ataaagaaaagcgcttaatagcttttttatttctttttcaaaaatctttt
tcaatagtgttgatagtttctctcaatagatatgctttcattttctttat
ttttttgtattttgaccagttatgtcttatgtgtttcattgttcactgat
tagtttgataaccaggtaggtccataaaagtatcgcttgtttacTTTACA
AactttctacattttttaataaatctACATTTATCTCAGCAAAATTTCTG
ATGTATCAGCATAAACTACAAAAAAACCAACTATTtctgtttcaatattt
tctttatttacagGGGCCTTAATAAAATTATGATAGACCAAAAAATACTT
TAGTGATTCGATATGGATGAGAATagagagaagaaaaaaagaaagaagaa
gaatgaTACACCTCCACCAAGGTCTTCTCCACCTCCATCTTTGAAGCCAT
TCACCATCCCAAAGACTGGGAACAAAGGTagagaatttgaattttttatt
ataattttaaaaataggcTAACCGTAATCTTTCCTTTTTGGTCATCACTT
TTTTAACGGAATGTACGCAATGAATTACTTTCAAAATCAATATCAATAGC
AACCAGTTTAATTTGTTGTttgctactctcgggtacctaatagccgtccc
cccactaattaattttttgaaaattttccacccaggacattcttattcca
accccccccccccccgcttattaatttttggaaaaatgtttttgaaagtt
ccctcttttgtcctaattctgctgcaTTAGCCTCCCTTTCAAACATTctt
cacccaggacatttttattccaaccgcccaccccccccccccccccgctt
attaatttttggaaaaatgtttttgaaagttccctcttttgtcctaattc
tgctgcaTTAGCCTCCCTTTCAAACATTcttcacccaggacatttttatt
ccaaccgcccaccccccccccccccccgcttattccaaactccccagcta
ttaggtacccgagagtatatcATTTATTCTTACCTACATTTTTTTGAATG
TGAAAGCACAACTCCTTAAAGAtgattcttttttaattttaagattCAAG
GTGATACACTTTGCATCTgttaattataataataattcTTATTGCGATAT
TCCAGAACGGTTATTTTTGAATTACACTTGCAAATTCTTTACTTTTTTAC
AGATTTATTTACTTCTTTGAGTCTGGACTCGCATGATGCAAAAGATATCG
TTAAAAACATCAACAACACACTTTGGGACAGAGCAACTACTACAATAAAT
gtaatcaaaatagaaaaagttcAGAATTCGCTTTTTCAAAGTGAGGTATG
ATGCTCCAAATAATTCTAAATTCAATCTTGAATTCTCAATAATGGTTTTT
CTCAATTTGATAACGATTTCTGATCCATTTTGATTATGGCTTAAAAAGCA
TACTTTTTATAGAGCTCACTCTTAGCAGAtctttgattttatattttgtt
tttcaatttctatttaCTTAAGTATGatgcaaaaagaaaagaattcaaAG
AGAAGAAATATACAACATCTGAAACAACTGACTCTTAtggatttttgttt
ttcaaaaatattgcaGAGGTTGGTATCAGTATGCTTTTGGCATATTTCAG
AAGGGGATCACTACCACCCCCTCTAGAGTCTAGAGCAACCATCCTACCAT
CCTACTCTAGGCTCTACCCCTTTTCAAAAGTTAATGGAACCCCCCTCAAA
ATCAGGGTGTCATTGggattttttctcattttcaagaCATTATGGATCAC
TAATATTAACTAAAATGATAGcaagtcaatttttttatctgcCGAGAGTA
CTCGATGATATCAGAGCTTGTTCAAGTTAAAAGAAAGAGAAACTTTGACT
TATTGTTtagaactttaagtttcatgccgcccgtatggacgacaatcatc
agctaaatgaaaattgtttgaaaaatattcatatacAATTCTTCGTTTGa
aattctgacgtcaatttttcattaaatgttTATACGATGCCGATTCTAAG
ATGATAAAATTGGTTTAGAAAAGATTACAAGCAAATCGATAATCCAAGAC
TGCAAAGCTAGAAATTTAGAAAGTAAAAACGGTTTATTCTGGGAGGACTT
CACTGaggattatttttttttaattatgaaaaagatatttgaaGAATAAA
AAGTTAGAGTTGATGGGAGGCTACATTTTAAGATATATTTTTCTAGTGCA
AGACAGCTTGTTCTGATGGAATCATTCGTGGTGACCAAAGATTGCCATCA
ACTGCAGGTTATTGCCTTGGTGATAAAAAATATGGTAAGTAGCCAAACTG
TTAAtttaaaaatgataatcaatataatttattttttcttgaaatgaaaa
caaccaaaacagtTAGTTTATGTAAACTATATTctgttaaaaactttttt
tctttcaattattatatttttctaaaagatttttttcctttgtcttttat
tttcagGAATATATCTATGTCGTTGTGCAGATATTTTGAATACTCTCCCT
CTATGGGAGAAAGATAACGTTATTGTTTTGGTTTGCAAATTCATGAAGGT
GATTATCTTTGTtccgaaatatttcttttatatttcTTACTTATTCCTTG
ATTCAAAGATTTAGAAGAATCTTTATACTACAAGCATAGGACTCATATTG
TATGATGAAAAAATCTCAGCACCCTCCCTTATATAACAGTCTGCCAGAAA
ATCAGTATCTTGGCAACCTTCTTTTAAATCTCTACGATTACTGGTCAGAT
ATAATTGTGAATTCGGGATATTTCGTtgtttctcaaaatttcaagcttgG
TTTTAAAGTTTACTAGGGATTTCTTACCAAATATTATTTGTCCCATCATT
GAAACCCTGCAATATTATTAtattcttgtttttcttttacaCAATTATTC
AGGGAAAGACAAACACTGTCAATGAGAATACAAATTCAACGATAGAACCC
TCCCCAGAATTTGATGCTCATACATCAAAGTCTTTTCAAAGAGGAAAAAA
GTGGACACATACAAAAATTTATAACACCTCACAggtaaaattttaatgtt
ttttcctCACTTTCTTTTATACTTCCCTGTTTTAGTACTAATGGTAGAGT
CCTCTGAAAGAATATGTAAAATGCTTTCAATGGTCTTCCTTGAATAGATT
GCTTCCTCTTAAAAGTTAGCTAAATGTCTTGAACCTGCTTGAATTTATAA
ACAGGTCGAAGTTACAGGGCGCCTCCTGCTTTTTGTGAATCTTTGATATC
CGGAAGTAAACCAAGCTCAAGTAATTCAAATCCATTTCTCTAGATTTATC
TTTACGAAGTTGACTTGGATAAGTTTtctgaagaagatgaagatgCAATA
TACGCTAAACGCCCTCGTCAATGTTTACCTTACGCCATCGCCACCTTTCG
TGTTCAGCAAAATGTACAACCCTCTGTTATAACTAAAGGACCAGTTACTC
AAAAGTCTGCAGCAGCTAAGCAAGTATGTTAGACCTAATTTATGAACAAT
ATTTACCATAGCGAACACGGTTTTAATAACGAGATGACTTCTAGACGATT
CAATAGGACTGGGTATCTCCTCTGTAAAAGAAAAGCCAGCCATATGGATC
CATTAANTTCAATAGGACTGGGTATCTCCTCTGTAAAAGAAAAGCCAGCC
ATATGGATCCATTAATGCGAAAAATTGAAACTAGAATGTTGCTCTTACCA
GTTCCCTGTTTAGTGGCTTACTTGTAATCAAGGAAGGGTGTTGCAATATT
TCAGTATTTGCATtctatactttttttttttacttttagttaCCTTCAAC
AATGCAACCGGTCGCTGTTCCTCTTCCAAGCAATCAAGCCCCAACAGGTA
TGAATACAGAATTTATACCTCCCTTGCCTAAAATCATTGTAACACCAGGG
GGTACAACTGCAGGGtactacatatttttttataagcatacaaaaatcta
aaaactgTCTCGGAGATGCTTAGATCGAGAGATTggcaaggctgaaaaat
gctttgaagaatgcttatatcctaagcaaATTTTTAGGGAGattccaaaa
atccaaaaaactttttttgaggaaaaaagggACCCGTTTAGCAAAATTTC
CATTCtaatttgccaaaataaataaattagatttatttaatttatttaaa
tgtaaatgataaattttaccCATTATAACCTCCAAATACCAAAATTCAGT
ATCAGGTACTAGCTATACCAACCCCACCCCAAATGTAGTACCGGACCGGG
TATCAACTTTTTTGAGATTCAAATTAGATTCTACCACCCGGCTATGGGTC
AGTACCCTACGGCTGTACCCCCTTCCCTGGTGCACACAACAATACCTTTT
TCTTCTCTGAATAAATAAACGATACTTAAATGATATATTTCAGTAAGATT
TTATGATAAAAATCAAGGTATATCCCTGCTAATGCGAACGCATCCTTAAA
ATATATGGCTTCTATTCTTCCTTTGCCCTGCCTGGGATACTCTTTATAAA
CTACtcgtactcttaggttccaaataaacgggggggggtcgaataaacag
ggggttgaaaaattttcgagattttaataaacgggcgGACCTAATTGcga
gggggttggaaattgtacttctgaaaacccaaaataaggtaaatataggc
taaaatcaggctatttagaacaaaataaggggccttctctttgacagatg
aaaatattcttaaaaattaataaacgagggggtcctaataaggtccgggg
gggttagaaaatttttgataaattaacaagcggggggggccgtttatttg
gaacccaAGAGTATCTATAAAAAGCTTGACGTTGAAGAAAATATTCCACC
TTTGGTGGCGTTAAAATACATGTTTTGTAGCTTTTTTTTCCTATCCTCTT
TCATTTCTAGTGACTGACTTTGCAGCTCTGGTAGGAAATAACCGTCAAGT
TTGGTCTGGCAATTACTACAATAATAATGTATCCTATGGACAAATCCGGC
TCTGTATGTATTCAAAAGACATGAACAACCTCGCTCTACCAATCGACGGG
TTAGTAAATCTTAAATCTAAGTTAACGTGAAGAAAGACCACTAGCTGGAT
TTCTCACCTCAATTTGATAGCTTTATAAAGCTCCTTTCGTTTCTGGCCAG
GTTATAACCATACTTATGTTTATAAACTTAGCAACAAAAAAGAGTTAGGA
CGAAAAGGATTTCTGTCTACTTAGAGTTGAACTAGGTAACCGCTTCTAGA
TCACAGTGTATCCAGAAAAAGTGTTACAGAATTTAAATAAAGCATAAAAT
CCTCATAATTAATATTGAATCGTTATCTTTGAAAGTCTGCTTCGTAAAAG
TGTCTGTACCGATNttttttctacttatgctataacgttcatttttacac
cagtggtagttcaactttaggttaagaagtttgttaaatttcaaggcaaa
caaaaaagtccttcagaagatatgggacccgaaataccccatggtagcac
ttttctgtgaaatatcaaatctccaacttattactaaaaacgggggttat
gttatcttttttgaacagtgcaattaaaagttggaaaatgttaagtgttg
gtgcattggtattattgctATTGGTATCATTTATTacttcgaaacgaagt
gaaatcacagtataattgtttttattttaaagataagcatgaacttatat
tgcctttgttattgctaattcccaaaacactaaacacagtttggctatga
ggtcattaaagagatcgtaaaatgtgttatgatcgaaaaactgttttatc
aatcatatcactaccctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNacttcttaacctaaggttgaactaccactggtgtaaaaatga
acgttatagcataagtagaaaaaaagctcaatttttgtaatcgcaaattt
aaccgctaaatatcgcgaatttttcaaccaaaaatacattcaaatatagc
gcttttgattctctaaaacaagcaaaaataatttacataattatatttga
ctatcaaaagttacaggcattcttgtttccactgccaattatatctggac
agactttaggtaACTGCTTCTAGATCACAGTGTATCCAGAAAAAGTGTTA
CAGAATTTAAATAAAGCATAAAATCCTCATAATTAATATTGAATCGTTAT
CTTTGAAAGTCTGCTTCGTAAAAGTGTCTGTACCGATGGTTACTAGCCTT
GCCTAACATTGCAAATTACTTCATTATTAATTTCTGTGCTTTTTTATTTg
catttttgtttaatttttagtaCTTCATTGTGTGTCACACAGAAAATATC
AATTGCGAAATTGGAAAGTGTTTTACCGCAGAAAATCTTTCGCAAATGTC
CCTGTTTGAATATGAGATATGCAGGTACGTTTTTATTACTTTTCTCCAGC
AAAGCTCATTTGAGCTGGAGACGATCCCCAAATTATGATGTTTGTAGAAT
GAAATTAAATAAGAAGCTGAATGCGTTTTTGAAAATGGGCATAGATAAAA
TGACTTAAAATGAAcgctatttttaaaagaaccactCAATTTTAGCTgag
ttgttcttaatttttttgaaattttaaggcttaaaaatattcttatgatg
ttcttaaaaaTGGTTTTACAATCTATTAAAATCTGTAATTTCGAAATCTG
AGGCTCattttgttcttaatttgttctgaGGTTTctgccaattttcagcc
tcgtgttcttataaaattgtttttataaaaaaagcttgtataCATAACCg
ttgaaaaatattacaaaCTTTATATAGAAACGGTAGAAAATGAGCGTTTT
CTTCACGCGGAGATCCATCCGGAAGCTGTCATGTCAAACAAGTTCGAACA
CCTTCATCAACATCTACTGCAATCCGAAATGGTATCTTTATGTTAAACTT
CTTTATAAGGGGGGAACTGACCCATAGCTGATGGGGTGGTGTTTTTAAGC
TAAATCTGGTTGTGAGCTAAAGTTAGGATACTGTACTAAAAGGTTTAATT
TTTTGCGTTAGTACACTGAGTTGGTACCCCCTTATAGGCCTTAGCCCTCT
TTATCTACTTGACTTGTGAAATTCCctagaaagaaagaaagtgtATACAG
AAATCTCTATCGATATTATGACTTGTTCGTATAAACAGAAAGAGAAGTAA
GTATTTtaatgttaaattttttttttatctcagGCAGGAATGAGTACCAT
TCGCCCTGGTTTGAAAATGTTCGTCATACCAACCGGTGAATACACACACA
AAATTGGTAAGATATTTATTCTTCTCTttattcattttctttcttctttt
tttgatggAGTGTAATTTTTTAAGCAACGTGCTAGAATtcagggggtgtt
tttttattgaaatgaaattcaaaatgtaaaatcgtgagtttttttaaatc
aaataaaattgaaaacaaagaatacCTTACCTAATAGTAGGGGGCGAATC
CTTAGGACCCATAACATCTTTTATGCAACGCAACCAAACCTGGTCCATTT
CAAAGAATAAAGTATTTAAAGAGTTTTTTGTGAGAGGGGTTTTCTGCTAG
ACTAGGAAAATTTCTCTGAAAACGACtcaaaaactgacgtcacagGCAAA
ACCTgttgaaattttaaagtcaataAATCCCGAAGCCACTTATATAGTCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNcaagctggcaaagctggggaaattttttt
atgggggcttgaaggggtagggtcattttagcctgggggtccttagaaag
tcgatttttgaagttcttattAAGCcaaaactgattgtgccatcagatag
agcttgaagagtagatttccaaaatggggtcatttgtctcatttagtgga
cttactcccccggaattggctgatacgtcttcaaaaatgcaatatttttt
gctgacgtcagcatttttgagaaagatttcAGCGAAAGATACCAGTTTTA
ACAGATGCCGCCGGACTAATACCAATCGAAAGCTCTTGAAAAACGATATA
GAGGCTTTTTAAGTGAACATACTTGATTTCCCAACGGCAATGACGTCAAA
ACGCAACTTGTCCTTTGCTTTCTTCGTTTAGTCGCGCCATAAATCTTGTT
GTGTCTTCCGCGTGCTCTGTTGTCCGCTAACacaaattttttattatttg
gtaattttttggacctacctccgggtaccccggtggaggtcctttaaatt
aacccatgtttattcgttcgttcgttcgttcgttcgttcgtctgttacca
gcttttctcgggattgttTTTTTGGcgcaatgatgcaaaatgatgattcc
taaaaagtgacggagcccgattttcgaaaaaacaaattttccggcaaaaa
atgccggaaatagcTGTTTTTCTGGAtattcattggactttttccttata
attggttgttttttcattcaaaaccattattgatagcaatgcccaccatt
aagcatgtttcaattttcaatgaaattgatttttgaagccggaactattt
aaaaatcgccggaacaacctattttcgCCGGAAAGACAGTATTTCTTGAA
TTTCTCGAGCTGTACTTTTTTTTATGAAATTTTGCACACTGATGCAAAAT
GACAATATCAGAGCACAATTTtcaaagaataaatttttccggccgaatat
gccggaaaaaccggttttttgacattttctcgaattttcatccttagttt
tttctgatttttgccgaaagatgcgtattcgcaatgctcaaaacatggcc
gagtttgatttttaagaaaaaaatttttccggttgaaaatgccgaaaatc
gccgtttttgcagatttttcccttatatttctatgtctttaacacaaaaa
cattattgataacaatgctcaccatcaagcataattttctgactgatttt
ttcatttttctcgacacattgctatctaactttcatcatcaggtaggtcc
attcagcatctagcttgtttctcTTTAGGTATCACTGGTCCTGGCTACCC
TCCCATCCTTCACTGTCTCTTCTTGAAACCGTTCAAAGGTAAGCACATCT
TCATACCTATACAGTAGGATGATAAATCTCTATGAGGTGGAATTTCAATG
AGAAACCATTAAGCATTCGGTAATCTTAAATCACTCCCTCGTTACCAGTC
TTATCGCACCCGAATTGCtgctcaaaaaaaaactttaaaaagtcagTTTT
TGGAAATGCTCACAAATCGCTGTATACTGAATGaccttttgtttttctct
tttcgaaATCTCTCTTCCTTACTTGTTTAGCCAGTGTGGGGGTGTTTCTG
TTGAATAAACTGAAATAATAATAGCACATGAAATTGTAATGTTTTGGACA
taaatttttctgtaaattcctatcgttaagaacaaagaaaattttagctc
ACTTAAGTATAATAAgtgacatcaaaaaattttaatgtcaatttaatatt
tattatatatgataatcaaaaattgaagtgTGGTACAGAAAAGTACCCCT
TGTTTTTAACCGCCCCTAAAAAAGCTCCGCTATTATGAATATGGTTAACG
ATATTCCGTTTGTTGCGTATAAAGGGAAGAaagatgatttttcttttttg
tttaaaaattctgtttttaaatattttattaatAGTTTAAGTAAATTGTA
GGAGATACGTTGAATGATGTCCTTTTAGTTCCTGACTTCTTGTATCTTTG
TTTTTAgattgtgacgtcatcatcgAGAATCGTGACAACGTGTTCCAAGA
TTTCAAGAAACGAATCTTTGACTGTCTCATCGAACGCTTGCATCAAAATG
AACAACTCAAAAgtcaaaagtccaaaaacccttCGCCTATTACCAAATAT
AAGAACGGATATTCGATGGACCAGCGCAAAAAGATCATCACAGCCTACAA
CACGATTCGGAAAACTTGCGCCGCTGCTAATGCCAAAAAGTCCAACGCTC
CACCGCCCAACTCTAGTAACGCAATCACTGCTCCACCAAAACAAAATAAG
TCTGATGATAAAGCTATGTTTCCGGATCAACGACCTTCCACCCAACATCC
ACCTCTGGACAATTCACGCCCTATTTCTCCTCCGCCCTCCTTACCATCAA
TTGACTTTTCAAGTCCTGCTATCCCAATCTCACAAACTGCTATCCCGACA
ACACAGTCTTCAACGGCGGCAAGTAACGCTCAAACGGACACCAGTACGAC
AGCTTTGTCGTCTATGTCGGCATTAATTAACTCTCCTGCTTTTCAAATGT
TCCAAAAAACTAACCCGACAGTGGTACAAcaaattatcggggaaaaccCA
GAACTTATGAAATCGCAAACTACTACAGTAGCATCAAAAGAGAATGAAAA
AGTTACTAAATTGGGAGAGACTACTAGTCAAAACACGACTGTGTCTGTTT
CGGAGCCACCAGCGGTTACTACATGTGCGGCAGTTTCTGATACTACCACG
ATGACCTCGAATACGTTATCAGGGTTTAAGATACCGCGCCGTTCATCTGC
CAGCAGTACCACGATAAATATAGTTGAACCTGCATCACAACTACCTCAAC
CTACTCCTATCCAAAATCAAACACAAGACAGAACTCCAGCATCTACGCCA
TACGTTCCAACCGAGCGTACAACTCAACAAACCCTGTATTGTAAGAGCGC
CGCTTTGGGTGGCTTATCGTTAATGAATATGATTTCTGATGAGACTCGAC
AGCAGGAGAGAGAACAAATGGAAAAGACTGCAGCAATGGCGAGAGGTGAA
CGTGCCCCTGTGTCTGAAAGTCATCATAAGTCATCAGGTGACAGATCACG
TGATCGTTCGCGTGACCGTGACCGTGGCAGAAGACGAGGGCATCGTGATA
GGTCGCGCGATCGAGGTCGAGACAGACGTCGCTCACGTTCGCGTGACCGG
CGGCGATCACGGAGTCGCGATCGGGACCGATCAAGGGGTAGACACTCACG
CAGGTCAGATTCACGCTCCAGCCGAAGAACGGGCAATTCTGATGAGGCAC
CTAAGAGGAAAGATTATGGTAATCTGTGGCAGCAAAGGATGCGAGAAGCA
GAAAACCAATTCATCAAGAGATATTCTTCACAAACAGAAGAATCGCAAAC
AGAAGGACCTCTTGTCATCGATACAGGTCAGATTGTTTTGCAAAAATGAA
TCTCTTCTTCGAGCTGTTagggaattttttttaatagaaagCTTCACTCG
TGTGTGACTATTAGCTAACGAATGTTAAACTTGGCCATAAGGCTTTTTTT
CCTACCCTGTTCTTTTTCAATTAAACTTTTGCATAGTTGTTCAACCCTTC
ACTAAATCCAATTGTCGCTGAAAATTCTAAATTCTAACACGGTTGCATAT
TATTTATCAACAGCCACGGAGAGTGATAAAACCGCTTCACCACTTAAACA
ACCAATCACGAACAACCATCTACATCAAAACAATACAAATTCAACCAACT
CTTCCCAAGAAGACCGCCCACTTTCTGATATGGTTATCTCACCAGAACCG
CAACCACACACTCCAACAATATCACCACGCCCTGCTAACGACGTCCAACA
GAAANTGAAGTGTGGTACAGAAAAGTACCCCTTGTTTTTAACCGCCCCTA
AAAAAGCTCCGCTATTATGAATATGGTTAACGATATTCCGTTTGTTGCGT
ATAAAGGGAAGAaagatgatttttcttttttgtttaaaaattctgttttt
aaatattttattaatAGTTTAAGTAAATTGTAGGAGATACGTTGAATGAT
GTCCTTTTAGTTCCTGACTTCTTGTATCTTTGTTTTTAgattgtgacgtc
atcatcgAGAATCGTGACAACGTGTTCCAAGATTTCAAGAAACGAATCTT
TGACTGTCTCATCGAACGCTTGCATCAAAATGAACAACTCAAAAgtcaaa
agtccaaaaacccttCGCCTATTACCAAATATAAGAACGGATATTCGATG
GACCAGCGCAAAAAGATCATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005029XLOC_005029Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008973-exon-sc0000089-1491911889:215010..215486TCONS_00008973-exon-sc0000089-1491911889:215010..215486Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:215010..215486TCONS_00008973-exon-sc0000089-1510915933:215010..215486Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:215010..215486TCONS_00008973-exon-sc0000089-1575043694:215010..215486Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1491911889:216212..216354TCONS_00008973-exon-sc0000089-1491911889:216212..216354Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:216212..216354TCONS_00008973-exon-sc0000089-1510915933:216212..216354Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:216212..216354TCONS_00008973-exon-sc0000089-1575043694:216212..216354Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1491911889:216532..216627TCONS_00008973-exon-sc0000089-1491911889:216532..216627Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:216532..216627TCONS_00008973-exon-sc0000089-1510915933:216532..216627Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:216532..216627TCONS_00008973-exon-sc0000089-1575043694:216532..216627Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1491911889:217256..217343TCONS_00008973-exon-sc0000089-1491911889:217256..217343Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:217256..217343TCONS_00008973-exon-sc0000089-1510915933:217256..217343Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:217256..217343TCONS_00008973-exon-sc0000089-1575043694:217256..217343Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1491911889:217516..217607TCONS_00008973-exon-sc0000089-1491911889:217516..217607Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:217516..217607TCONS_00008973-exon-sc0000089-1510915933:217516..217607Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:217516..217607TCONS_00008973-exon-sc0000089-1575043694:217516..217607Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1491911889:217962..218093TCONS_00008973-exon-sc0000089-1491911889:217962..218093Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:217962..218093TCONS_00008973-exon-sc0000089-1510915933:217962..218093Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:217962..218093TCONS_00008973-exon-sc0000089-1575043694:217962..218093Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1491911889:218353..218532TCONS_00008973-exon-sc0000089-1491911889:218353..218532Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:218353..218532TCONS_00008973-exon-sc0000089-1510915933:218353..218532Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:218353..218532TCONS_00008973-exon-sc0000089-1575043694:218353..218532Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1491911889:218849..218906TCONS_00008973-exon-sc0000089-1491911889:218849..218906Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:218849..218906TCONS_00008973-exon-sc0000089-1510915933:218849..218906Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:218849..218906TCONS_00008973-exon-sc0000089-1575043694:218849..218906Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1491911889:219970..220108TCONS_00008973-exon-sc0000089-1491911889:219970..220108Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:219970..220108TCONS_00008973-exon-sc0000089-1510915933:219970..220108Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:219970..220108TCONS_00008973-exon-sc0000089-1575043694:219970..220108Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1491911889:221580..221683TCONS_00008973-exon-sc0000089-1491911889:221580..221683Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:221580..221683TCONS_00008973-exon-sc0000089-1510915933:221580..221683Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:221580..221683TCONS_00008973-exon-sc0000089-1575043694:221580..221683Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1491911889:222087..222190TCONS_00008973-exon-sc0000089-1491911889:222087..222190Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:222087..222190TCONS_00008973-exon-sc0000089-1510915933:222087..222190Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:222087..222190TCONS_00008973-exon-sc0000089-1575043694:222087..222190Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1491911889:222493..222565TCONS_00008973-exon-sc0000089-1491911889:222493..222565Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:222493..222565TCONS_00008973-exon-sc0000089-1510915933:222493..222565Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:222493..222565TCONS_00008973-exon-sc0000089-1575043694:222493..222565Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1491911889:224488..224547TCONS_00008973-exon-sc0000089-1491911889:224488..224547Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:224488..224547TCONS_00008973-exon-sc0000089-1510915933:224488..224547Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:224488..224547TCONS_00008973-exon-sc0000089-1575043694:224488..224547Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1491911889:227299..227481TCONS_00008973-exon-sc0000089-1491911889:227299..227481Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1510915933:227299..227481TCONS_00008973-exon-sc0000089-1510915933:227299..227481Clytia hemisphaericaexon
TCONS_00008973-exon-sc0000089-1575043694:227299..227481TCONS_00008973-exon-sc0000089-1575043694:227299..227481Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089supercontigsc0000089:215010..227481 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.265751	0.000142815	5.46842e-06	3.27268e-09	1.71085	3.63157	1.93768	3.72758	0.137664	2.05348	4.12514	0.420252	0.798506	1.4544	0.965337	1.35653	0.669695	0.78181	0.581911	1.02295	0.654442	0.150688	0.0553026	0.0866885	1.61982	2.32536	0.000460016	0.929076	1.08948	0.839424
Blast
[Close]
BLAST of TCONS_00008973 vs. Swiss-Prot (Human)
Match: TASOR (Protein TASOR OS=Homo sapiens GN=FAM208A PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 6.152e-20
Identity = 68/250 (27.20%), Postives = 112/250 (44.80%), Query Frame = 3 
Query:  444 KPFTIPKTGN--KDLFTSLSLDSHDAKDIVKNINNT-LWDRATTTINVIKIEKVQNSLFQSEYDAKRKEFKEKKYTTSETTDSYGFLFFKNIAECKTACSDGIIRGDQRLPSTAGYCLGDKKYGIYLCRCADILNTLPLWEKDNVIVLVCKFMKGKTNTVNEN----------TNSTIEPSPEFDAHTSKSFQRGKKWTHTKIYNTSQIYLYEVDLDKFSEEDEDAIYAKRPRQCLPYAIATFRVQQNVQ 1154
            + F IP+     K LF  L+  S + +D+V  ++++ L   + T  N  +   V N L + E+  KR+E K       E ++SY FL      + +T C  G+  G  ++       LG    G+YL R AD+L   PL       V++ K MKGK  ++ +             S ++P+P+ + H SK+  R       + Y  +Q Y YE   D+           +RPR   PYA+ +F  + ++Q
Sbjct:   98 RSFQIPRKSREKKALFQPLTPGSREFEDVVNILHSSYLEPTSVTNFNYRRACLVHNELLEKEFTEKRRELKFDGRLDKELSESYAFLMVDRY-QVQTICEKGLHVGQSKIT-----ILGSPSMGVYLSRYADLLQANPLDTGAMGDVVIFKIMKGKIKSIYDPMGVKSLESMLNKSALDPTPKHECHVSKNANRITSLLAYRAYELTQYYFYEYGFDELR---------RRPRHVCPYAVVSFTYKDDIQ 332
The following BLAST results are available for this feature:
BLAST of TCONS_00008973 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TASOR6.152e-2027.20Protein TASOR OS=Homo sapiens GN=FAM208A PE=1 SV=3[more]
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