TCONS_00008900 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008900
Unique NameTCONS_00008900
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2271

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008900 ID=TCONS_00008900|Name=TCONS_00008900|organism=Clytia hemisphaerica|type=transcript|length=2271bp
AGTACGGTGTCCCGCAGAAAAGATTATCAAAACTATAGACGAGATTTATC
ACTTCAAATCGATTCAAGTGGGTGAGGTGCAAAATTTTTCATGTATCTAT
GGTCAAACAGACGAAGCTAAAAAACTTGAAAGAGCAACAATATTGTCTCG
AGCATGTGCGTTCGTCAACGGATCAAAAAGTGTAGCACAATGGGAACCAC
TCGACATATCCTCATGCAGAAGGAACGATCAGGAAAAGCAACTTCTAAAT
GTTGATTTGAGTAAAATTGACAGTGAGACTGTTGGCGAATTTGCAAAACA
GATTAGCAAGTTGACGTCCAATACATCACTTATCAACAACAAGCAAACTG
TTCAAAATTTAAtcaaagttcttgaaaaaattattaacattcaaaacaca
aaaattgagGTCAAAGAAAACGTTTTGAAGATTCTGGACAACATCATACC
AATCAACGATTCAATTATTCcaaacgaaaacaaaaatcaacttcttagtT
TTGTTGACAAAATCACAGAAAACATTCAACAACCTTCGTTCAATTATTCC
GGACAAAATCTCGCTGTTTCGATCCAAACGCAGAACAGGTCGCAAGCAAC
AAATATAAAAAGTTTTGACAATGatgagaaaattgaaattgagtTCAATA
ATTATGACAACCTTACCGTTGTTGGCAATATTAGTCAAGTGTCTTCCATA
TATATCCCAGAAACGACTTTCACTGATATACTAAGCGACATCAAAATCAT
ATCTACTGCATAtaaaaaagacacttttttcaGTACAACGCCATCAAACA
AAACACAAACTGGCAGTTACATTATGTCAGCATCAATCAAGAGTCAGCAT
ATTGAGAATTTGACAGAtccaataaaattgaaatttaaaatcgaTGAAAG
AAAGTCAAACGGGACATGTGTTTTCTGGGAAACagACGGAAACTATTGGT
CAACTCGTGGTTGCACAACCTTAGTGAATTCGAAAAATGAGGTCACATGT
GAATGCAATCATTTGACAAATTTCGCCATTCTTTTCAATGTGTATCATGT
AGATGAAGATGTGTTGAAATCGCAAGAAGTTTTGAATTATGTTAGTCTTG
TTGGTTGTGTTCTATCCATCGTTGGATTATTGGCCACTGTTATTGCTCTT
GGTTGTTCGACTGGGCAAAGAAAAACCCGTCGTAAAACCGGTCAATTTAT
GATCATAAATTTCTGCATAGCTTTGGTTCTTCTTCTTTGTGTGTTTATAC
TCATCACCAATATGGAACACTTTCATCATTCTTCAACTATTTTATGCCAC
AACTTGTCTGCCATCTTACATTTCACGATTATGGCAACTTTCTGTTGGAC
GGCCGCCCAAGCGAtctttttgtataagaaaacTGTTCTGGCGACCAAGA
ATTTTCAAGGAGATAACATGAAAAGCTACTATGCAAGTCTCTGTCTTGCT
TGGGGCTTACCGATGGTCGCTGCTGCAGTAACGTCAAGATTTACCAAAAG
CCAATTTGACAGACCTGACAATGAACTaTGCATCTTGAAAGGtgatattt
tcatttattcGACGATCATTCCAATCACatgtatcatttttttcaacCTC
ATTGTTTTCATAATGGTCATGCGCAAAGTTCATGGTCATTTCAAAACACG
TGCTTCATTTCAACAAAAAGAAGACAAGCAGATCTGGAAAAGAGCGAAGG
CTACAATGATCTGTATGGTTCTATTAGGATTGACCTGGATTTTCGGATTC
ATGGCTGTTGGTGATTTACATGCTCCTTTACAATGGCTGTTTTGTATCAC
GAACACTTTACAaggtgtttttgtttttgttttctacGTTCTCCTCAATG
ATGAAGTGCGAAAAGCTTGGAATTCAAGATAGTCTTCTGCGTTAACGCTT
ACTTCACACAAAACCAAGAAAAAAACATCggaaaatgaattcaaaatcgG
AACATTGAGAAATCATGCAAGAACTAAACAAATGAAAGATAAATGTGAAA
CTTTTTAGGACTTtgatatacagggtgtccctaattaaagtatcgagttt
gaacatgcgattgagtagaaaagtttgtgtgtgttatcgctaaaatataa
ggaCGCTCTCCGTCACACAGgctattacaaaaggtagtgacaacgtataa
attaatcgtaatgacaaagaaaaaagagggagagcttaaaatacaatttt
gtgaacacgcacataaaactttctactcatagttgtgtttcgactcgata
ctttaattagggacaccctgt
Run BLAST on NCBI

protein sequence of TCONS_00008900-protein

>TCONS_00008900-protein ID=TCONS_00008900-protein|Name=TCONS_00008900-protein|organism=Clytia hemisphaerica|type=polypeptide|length=626bp
VRCPAEKIIKTIDEIYHFKSIQVGEVQNFSCIYGQTDEAKKLERATILSR
ACAFVNGSKSVAQWEPLDISSCRRNDQEKQLLNVDLSKIDSETVGEFAKQ
ISKLTSNTSLINNKQTVQNLIKVLEKIINIQNTKIEVKENVLKILDNIIP
INDSIIPNENKNQLLSFVDKITENIQQPSFNYSGQNLAVSIQTQNRSQAT
NIKSFDNDEKIEIEFNNYDNLTVVGNISQVSSIYIPETTFTDILSDIKII
STAYKKDTFFSTTPSNKTQTGSYIMSASIKSQHIENLTDPIKLKFKIDER
KSNGTCVFWETDGNYWSTRGCTTLVNSKNEVTCECNHLTNFAILFNVYHV
DEDVLKSQEVLNYVSLVGCVLSIVGLLATVIALGCSTGQRKTRRKTGQFM
IINFCIALVLLLCVFILITNMEHFHHSSTILCHNLSAILHFTIMATFCWT
AAQAIFLYKKTVLATKNFQGDNMKSYYASLCLAWGLPMVAAAVTSRFTKS
QFDRPDNELCILKGDIFIYSTIIPITCIIFFNLIVFIMVMRKVHGHFKTR
ASFQQKEDKQIWKRAKATMICMVLLGLTWIFGFMAVGDLHAPLQWLFCIT
NTLQGVFVFVFYVLLNDEVRKAWNSR
Run BLAST on NCBI

transcript from alignment at sc0000088:369740..374614-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008900 ID=TCONS_00008900|Name=TCONS_00008900|organism=Clytia hemisphaerica|type=transcript|length=4875bp|location=Sequence derived from alignment at sc0000088:369740..374614- (Clytia hemisphaerica)
AGTACGGTGTCCCGCAGAAAAGATTATCAAAACTATAGACGAGATTTATC
ACTTCAAATCGATTCAAGTGGGTGAGGTGCAAAATTTTTCATGTATCTAT
GGTCAAACAGACGAAGCTAAAAAACTTGAAAGAGCAACAATATTGTCTCG
AGCATGTGCGTTCGTCAACGGATCAAAAAGTGTAGCACAATGGGAACCAC
TCGACATATCCTCATGCAGAAGGAACGATCAGGAAAAGCAACTTCTAAAT
GTTGATTTGGTGAGTTAGTTGTCCACACATATCTTTTATAAGAACATCCA
AAAAGCCTTCAGATGTGCTTAACTTTTTGAGATTCAAGCCTAAANTGTTT
GTCAACGGATCAAAAAGTGTAGCACAATGGGAACCACTCGACATATCGTC
ATGCAGAAGGAACGATCAGGAAAAGCAACTCCTAAATGTTAATTTGGTAA
GTTAGTTGTCCTCACATATTTTTTATAAGAACATCCAAAAAGCCTTCAGA
TGTGCTTAACTTTTTGAGATTCAAGCCTAAAGTCCTTTAAAATGTTCATA
TTCATATTTGTGAGTATTTTTGTTCAAATTCCTAAGAATAGACCTTTTCA
GAATTCACGGTTTACCTTTTAGAGTAAAATTGACAGTGAGACTGTTGGCG
AATTTGCAAAACAGATTAGCAAGTTGACGTCCAATACATCACTTATCAAC
AACAAGCAAACTGTTCAAAATTTAATCAAAGTTCTTGAAAAAATTATTAA
CATTCAAAACACAAAAATTGAGGTAAGGCTTTATAACAGCTCCTGCACCA
AGGTAAACATCAATTCTTGAGTTTAACCGAAAGTCTGACTTTCAGAGGCT
CCTGAAATCTAGATATTGTACACCAATCGATGCAGAATTACATATAGATT
CCAAAGAATCTTAATGAAAAGACAAACAAAGATTTCGATATAAAATGTAC
ACGTTTTTTTATATCCAAAATTTTTGAAGCCTTCTGATGTTCATGTCTTT
TGAATTTTAAGCCTAAAAATGTTCTTAACATGTTCTCATTTCCCAATTTT
TTGAGTACTTTTGTCTATTTTCCTAAGAAATCGGGTACTTCAAAGTACCC
AAAGCCTAAAAATGTTCTTAACATGTTCTCATTTTCACAATTTTTTGAGT
ACTTTTGTCTATTTTCCTAAGAAATCGGGTATTTTAGAGTATCCAAAGCC
TTAAAATGTTCTTAACTTGCTCTTAACATTTTGGCCATTGAAACCTCATG
TTCCTATGTAGTTTGTTCATAAAAAAAACGTGAAGTGCAATTTTAATTTA
GTATCTAAGGTTGTTACCATTCACTTAATATTACAGGTCAAAGAAAACGT
TTTGAAGATTCTGGACAACATCATACCAATCAACGATTCAATTATTCCAA
ACGAAAACAAAAATCAACTTCTTAGTTTTGTTGACAAAATCACAGAAAAC
ATTCAACAACCTTCGTTCAATTATTCCGGACAAAATCTCGCTGTTTCGAT
CCAAACGCAGAACAGGTCGCAAGCAACAAATATAAAAAGTTTTGACAATG
ATGAGAAAATTGAAATTGAGTTCAATAATTATGACAACCTTACCGTTGTT
GGCAATATTAGTCAAGTGTCTTCCATATATATCCCAGAAACGACTTTCAC
TGATATACTAAGCGACATCAAAATCATATCTACTGCATATAAAAAAGACA
CTTTTTTCAGTACAACGCCATCAAACAAAACACAAACTGGCAGTTACATT
ATGTCAGCATCAATCAAGAGTCAGCATATTGAGAATTTGACAGATCCAAT
AAAATTGAAATTTAAAATCGATGAAAGAAAGTCAAACGGGACATGTGTTT
TCTGGGAAACAGGTTTAAATTCTTTTTTCTTTCATTTCTTTGGCGGTTAT
TTCTTACCTGGAGCAATCCCAGCTGGCACACAACGTTGTTTCGACGTTCA
CAACGTCCATATAACGTTAGAAAAACGTTGAAACAACGTTGTGTGACAGC
TGGGATCCGGTTAATATTTCATCATGTGATATATAAACATCAAAATGAAA
TGATGAATGAATCTTTTTCTCTTTACTTCAATAGACGGAAACTATTGGTC
AACTCGTGGTTGCACAACCTTAGTGAATTCGAAAAATGAGGTCACATGTG
AATGCAATCATTTGACAAATTTCGCCATTCTTTTCAATGTGTATCATGTA
GATGAAGATGTGTTGAAATCGCAAGAAGTTTTGAATTATGTTAGTCTTGT
TGGTTGTGTTCTATCCATCGTTGGATTATTGGCCACTGTTATTGCTCTTG
GTTGTTCGACTGGGTAAGAATCTGACTGGAACAAAATAAATTAATTCTCA
CATAGAATGCCTTCTTGTAACAAAAGAAAACATTTTTAACTTAAATTCTG
GTTCGGTCAAAATTGATAGTACTAGTTTTCCCGACCCGATAAGGTTGATA
GTGAATTTATGCATTTGCACTGTTGAGAACGGTAGGGTGACTGAAGCAAT
TTGTCGTCCTCAGCTGGTCAGGATCTAGACAATTCAGCAACTAATCGTCT
CCGTCGTAGAAAAACACAGATACATAAACCAACTAATGGATGATCTTTGG
GATAACGTGTAAAAGCATGTGTGATGTAATCCCTAAAGATACGGCATAGA
CCGCTGTTAAAACTTGTGACTTAGGATAATTGCAAGGCAATTTATCTTCG
CTGCATTTAGGGGTCCCCCAGTGGTTTGCGTGAATGCGTGAATGGGCTTT
TTCACTTGCGTGAATGCCTAAAAATAAAATAAAAATTGCGTGAATACGTG
AATTGGAAAGCTTTGCGTGAACAAAAATTGCGTGAATTGCGAAAAAAACA
TTGTGTGAATTTGGGAAAAGAAATTTACGTAATTGCATGAATTGATGGTC
CGTTGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGTTCATTTATT
TTCAATATAGCGTTTGCAATCAAAACCACGCGGGTCACGCGTTTTAGTAT
GGAAAATAAATGGTTTCATCTCCCATCCAAGAGTTTTATCTAATCTAGAA
CAACCTTTAGGGTTTTCAAATCAATGGTTCAAATACCAATCTTTAATCGT
TATAGAATAGAAAGGGCTGACGTCTCTTTATTATTTTCTTATAGGCAAAG
AAAAACCCGTCGTAAAACCGGTCAATTTATGATCATAAATTTCTGCATAG
CTTTGGTTCTTCTTCTTTGTGTGTTTATACTCATCACCAATATGGAACAC
TTTCATCATTCTTCAACTATTTTATGCCACAACTTGTCTGCCATCTTACA
TTTCACGATTATGGCAACTTTCTGTTGGACGGCCGCCCAAGCGATCTTTT
TGTATAAGAAAACTGTTCTGGCGACCAAGAATTTTCAAGGAGATAACATG
AAAAGCTACTATGCAAGTCTCTGTCTTGCTTGGGGTGAGTTTCTCAACTT
TTGTTTTTGTTTTAAGCTCTATGAAAAGACAAAGCAACGCTGTCAACTTT
TGAGTAATTTTTGACACTGTCAAGATGAAATATATATCATTTATTGGGTG
GTCATCAAAGATAGTTATAACAGTTGGGACTTGTGTATTCTCTAGGCTTA
CCGATGGTCGCTGCTGCAGTAACGTCAAGATTTACCAAAAGCCAATTTGA
CAGACCTGACAATGAACTGTAAGTGGCAGGACTTTCAACAATCAATAAGG
ACTCGTAGCTAGGGGACACTCAAATAAGAGTTTCATTATCTGCAAAACTT
TCTGATTTTTTCCTTTCCCGATGGCTTGGTAATACATCTTGTTTGCCTCG
CAGTTTTGATGATGGAGCTCTATTTAGACAGTGATTCAAATTCACTGATT
CAGATTCCTCAAATTTTACAAAAAATGAACAGACTCGATCTTTTTAGTTA
TTTTTTTACCATACAACAATGGACTTGATACAGTCGTGAGTGTTGACATA
TTGTCATAAAAAGCCGAACTAAGAGACAGGGTTCTATTTTAGAAAGGACG
ACAATCAAAAAGATTTTTCAATTTTTCTTAGATGCATCTTGAAAGGTGAT
ATTTTCATTTATTCGACGATCATTCCAATCACATGTATCATTTTTTTCAA
CCTCATTGTTTTCATAATGGTCATGCGCAAAGTTCATGGTCATTTCAAAA
CACGTGCTTCATTTCAACAAAAAGAAGACAAGCAGATCTGGAAAAGAGCG
AAGGCTACAATGATCTGTATGGTTCTATTAGGATTGACCTGGATTTTCGG
ATTCATGGCTGTTGGTGATTTACATGCTCCTTTACAATGGCTGTTTTGTA
TCACGAACACTTTACAAGGTGTTTTTGTTTTTGTTTTCTACGTTCTCCTC
AATGATGAAGTGCGAAAAGCTTGGAATTCAAGATAGTCTTCTGCGTTAAC
GCTTACTTCACACAAAACCAAGAAAAAAACATCGGAAAATGAATTCAAAA
TCGGAACATTGAGAAATCATGCAAGAACTAAACAAATGAAAGATAAATGT
GAAACTTTTTAGGACTTTGATATACAGGGTGTCCCTAATTAAAGTATCGA
GTTTGAACATGCGATTGAGTAGAAAAGTTTGTGTGTGTTATCGCTAAAAT
ATAAGGACGCTCTCCGTCACACAGGCTATTACAAAAGGTAGTGACAACGT
ATAAATTAATCGTAATGACAAAGAAAAAAGAGGGAGAGCTTAAAATACAA
TTTTGTGAACACGCACATAAAACTTTCTACTCATAGTTGTGTTTCGACTC
GATACTTTAATTAGGGACACCCTGT

Coding sequence (CDS) from alignment at sc0000088:369740..374614-

>TCONS_00008900 ID=TCONS_00008900|Name=TCONS_00008900|organism=Clytia hemisphaerica|type=CDS|length=13167bp|location=Sequence derived from alignment at sc0000088:369740..374614- (Clytia hemisphaerica)
ATGCATCTTGAAAGGTGATATTTTCATTTATTCGACGATCATTCCAATCA
CATGTATCATTTTTTTCAACCTCATTGTTTTCATAATGGTCATGCGCAAA
GTTCATGGTCATTTCAAAACACGTGCTTCATTTCAACAAAAAGAAGACAA
GCAGATCTGGAAAAGAGCGAAGGCTACAATGATCTGTATGGTTCTATTAG
GATTGACCTGGATTTTCGGATTCATGGCTGTTGGTGATTTACATGCTCCT
TTACAATGGCTGTTTTGTATCACGAACACTTTACAAGGTGTTTTTGTTTT
TGTTTTCTACGTTCTCCTCAATGATGAAGTGCGAAAAGCTTGGAATTCAA
GATAGGCTTACCGATGGTCGCTGCTGCAGTAACGTCAAGATTTACCAAAA
GCCAATTTGACAGACCTGACAATGAACTGCAAAGAAAAACCCGTCGTAAA
ACCGGTCAATTTATGATCATAAATTTCTGCATAGCTTTGGTTCTTCTTCT
TTGTGTGTTTATACTCATCACCAATATGGAACACTTTCATCATTCTTCAA
CTATTTTATGCCACAACTTGTCTGCCATCTTACATTTCACGATTATGGCA
ACTTTCTGTTGGACGGCCGCCCAAGCGATCTTTTTGTATAAGAAAACTGT
TCTGGCGACCAAGAATTTTCAAGGAGATAACATGAAAAGCTACTATGCAA
GTCTCTGTCTTGCTTGGGACGGAAACTATTGGTCAACTCGTGGTTGCACA
ACCTTAGTGAATTCGAAAAATGAGGTCACATGTGAATGCAATCATTTGAC
AAATTTCGCCATTCTTTTCAATGTGTATCATGTAGATGAAGATGTGTTGA
AATCGCAAGAAGTTTTGAATTATGTTAGTCTTGTTGGTTGTGTTCTATCC
ATCGTTGGATTATTGGCCACTGTTATTGCTCTTGGTTGTTCGACTGGGTC
AAAGAAAACGTTTTGAAGATTCTGGACAACATCATACCAATCAACGATTC
AATTATTCCAAACGAAAACAAAAATCAACTTCTTAGTTTTGTTGACAAAA
TCACAGAAAACATTCAACAACCTTCGTTCAATTATTCCGGACAAAATCTC
GCTGTTTCGATCCAAACGCAGAACAGGTCGCAAGCAACAAATATAAAAAG
TTTTGACAATGATGAGAAAATTGAAATTGAGTTCAATAATTATGACAACC
TTACCGTTGTTGGCAATATTAGTCAAGTGTCTTCCATATATATCCCAGAA
ACGACTTTCACTGATATACTAAGCGACATCAAAATCATATCTACTGCATA
TAAAAAAGACACTTTTTTCAGTACAACGCCATCAAACAAAACACAAACTG
GCAGTTACATTATGTCAGCATCAATCAAGAGTCAGCATATTGAGAATTTG
ACAGATCCAATAAAATTGAAATTTAAAATCGATGAAAGAAAGTCAAACGG
GACATGTGTTTTCTGGGAAACAGAGTAAAATTGACAGTGAGACTGTTGGC
GAATTTGCAAAACAGATTAGCAAGTTGACGTCCAATACATCACTTATCAA
CAACAAGCAAACTGTTCAAAATTTAATCAAAGTTCTTGAAAAAATTATTA
ACATTCAAAACACAAAAATTGAGGTACGGTGTCCCGCAGAAAAGATTATC
AAAACTATAGACGAGATTTATCACTTCAAATCGATTCAAGTGGGTGAGGT
GCAAAATTTTTCATGTATCTATGGTCAAACAGACGAAGCTAAAAAACTTG
AAAGAGCAACAATATTGTCTCGAGCATGTGCGTTCGTCAACGGATCAAAA
AGTGTAGCACAATGGGAACCACTCGACATATCCTCATGCAGAAGGAACGA
TCAGGAAAAGCAACTTCTAAATGTTGATTTGATGCATCTTGAAAGGTGAT
ATTTTCATTTATTCGACGATCATTCCAATCACATGTATCATTTTTTTCAA
CCTCATTGTTTTCATAATGGTCATGCGCAAAGTTCATGGTCATTTCAAAA
CACGTGCTTCATTTCAACAAAAAGAAGACAAGCAGATCTGGAAAAGAGCG
AAGGCTACAATGATCTGTATGGTTCTATTAGGATTGACCTGGATTTTCGG
ATTCATGGCTGTTGGTGATTTACATGCTCCTTTACAATGGCTGTTTTGTA
TCACGAACACTTTACAAGGTGTTTTTGTTTTTGTTTTCTACGTTCTCCTC
AATGATGAAGTGCGAAAAGCTTGGAATTCAAGATAGGCTTACCGATGGTC
GCTGCTGCAGTAACGTCAAGATTTACCAAAAGCCAATTTGACAGACCTGA
CAATGAACTGCAAAGAAAAACCCGTCGTAAAACCGGTCAATTTATGATCA
TAAATTTCTGCATAGCTTTGGTTCTTCTTCTTTGTGTGTTTATACTCATC
ACCAATATGGAACACTTTCATCATTCTTCAACTATTTTATGCCACAACTT
GTCTGCCATCTTACATTTCACGATTATGGCAACTTTCTGTTGGACGGCCG
CCCAAGCGATCTTTTTGTATAAGAAAACTGTTCTGGCGACCAAGAATTTT
CAAGGAGATAACATGAAAAGCTACTATGCAAGTCTCTGTCTTGCTTGGGA
CGGAAACTATTGGTCAACTCGTGGTTGCACAACCTTAGTGAATTCGAAAA
ATGAGGTCACATGTGAATGCAATCATTTGACAAATTTCGCCATTCTTTTC
AATGTGTATCATGTAGATGAAGATGTGTTGAAATCGCAAGAAGTTTTGAA
TTATGTTAGTCTTGTTGGTTGTGTTCTATCCATCGTTGGATTATTGGCCA
CTGTTATTGCTCTTGGTTGTTCGACTGGGTCAAAGAAAACGTTTTGAAGA
TTCTGGACAACATCATACCAATCAACGATTCAATTATTCCAAACGAAAAC
AAAAATCAACTTCTTAGTTTTGTTGACAAAATCACAGAAAACATTCAACA
ACCTTCGTTCAATTATTCCGGACAAAATCTCGCTGTTTCGATCCAAACGC
AGAACAGGTCGCAAGCAACAAATATAAAAAGTTTTGACAATGATGAGAAA
ATTGAAATTGAGTTCAATAATTATGACAACCTTACCGTTGTTGGCAATAT
TAGTCAAGTGTCTTCCATATATATCCCAGAAACGACTTTCACTGATATAC
TAAGCGACATCAAAATCATATCTACTGCATATAAAAAAGACACTTTTTTC
AGTACAACGCCATCAAACAAAACACAAACTGGCAGTTACATTATGTCAGC
ATCAATCAAGAGTCAGCATATTGAGAATTTGACAGATCCAATAAAATTGA
AATTTAAAATCGATGAAAGAAAGTCAAACGGGACATGTGTTTTCTGGGAA
ACAGAGTAAAATTGACAGTGAGACTGTTGGCGAATTTGCAAAACAGATTA
GCAAGTTGACGTCCAATACATCACTTATCAACAACAAGCAAACTGTTCAA
AATTTAATCAAAGTTCTTGAAAAAATTATTAACATTCAAAACACAAAAAT
TGAGGTACGGTGTCCCGCAGAAAAGATTATCAAAACTATAGACGAGATTT
ATCACTTCAAATCGATTCAAGTGGGTGAGGTGCAAAATTTTTCATGTATC
TATGGTCAAACAGACGAAGCTAAAAAACTTGAAAGAGCAACAATATTGTC
TCGAGCATGTGCGTTCGTCAACGGATCAAAAAGTGTAGCACAATGGGAAC
CACTCGACATATCCTCATGCAGAAGGAACGATCAGGAAAAGCAACTTCTA
AATGTTGATTTGATGCATCTTGAAAGGTGATATTTTCATTTATTCGACGA
TCATTCCAATCACATGTATCATTTTTTTCAACCTCATTGTTTTCATAATG
GTCATGCGCAAAGTTCATGGTCATTTCAAAACACGTGCTTCATTTCAACA
AAAAGAAGACAAGCAGATCTGGAAAAGAGCGAAGGCTACAATGATCTGTA
TGGTTCTATTAGGATTGACCTGGATTTTCGGATTCATGGCTGTTGGTGAT
TTACATGCTCCTTTACAATGGCTGTTTTGTATCACGAACACTTTACAAGG
TGTTTTTGTTTTTGTTTTCTACGTTCTCCTCAATGATGAAGTGCGAAAAG
CTTGGAATTCAAGATAGGCTTACCGATGGTCGCTGCTGCAGTAACGTCAA
GATTTACCAAAAGCCAATTTGACAGACCTGACAATGAACTGCAAAGAAAA
ACCCGTCGTAAAACCGGTCAATTTATGATCATAAATTTCTGCATAGCTTT
GGTTCTTCTTCTTTGTGTGTTTATACTCATCACCAATATGGAACACTTTC
ATCATTCTTCAACTATTTTATGCCACAACTTGTCTGCCATCTTACATTTC
ACGATTATGGCAACTTTCTGTTGGACGGCCGCCCAAGCGATCTTTTTGTA
TAAGAAAACTGTTCTGGCGACCAAGAATTTTCAAGGAGATAACATGAAAA
GCTACTATGCAAGTCTCTGTCTTGCTTGGGACGGAAACTATTGGTCAACT
CGTGGTTGCACAACCTTAGTGAATTCGAAAAATGAGGTCACATGTGAATG
CAATCATTTGACAAATTTCGCCATTCTTTTCAATGTGTATCATGTAGATG
AAGATGTGTTGAAATCGCAAGAAGTTTTGAATTATGTTAGTCTTGTTGGT
TGTGTTCTATCCATCGTTGGATTATTGGCCACTGTTATTGCTCTTGGTTG
TTCGACTGGGTCAAAGAAAACGTTTTGAAGATTCTGGACAACATCATACC
AATCAACGATTCAATTATTCCAAACGAAAACAAAAATCAACTTCTTAGTT
TTGTTGACAAAATCACAGAAAACATTCAACAACCTTCGTTCAATTATTCC
GGACAAAATCTCGCTGTTTCGATCCAAACGCAGAACAGGTCGCAAGCAAC
AAATATAAAAAGTTTTGACAATGATGAGAAAATTGAAATTGAGTTCAATA
ATTATGACAACCTTACCGTTGTTGGCAATATTAGTCAAGTGTCTTCCATA
TATATCCCAGAAACGACTTTCACTGATATACTAAGCGACATCAAAATCAT
ATCTACTGCATATAAAAAAGACACTTTTTTCAGTACAACGCCATCAAACA
AAACACAAACTGGCAGTTACATTATGTCAGCATCAATCAAGAGTCAGCAT
ATTGAGAATTTGACAGATCCAATAAAATTGAAATTTAAAATCGATGAAAG
AAAGTCAAACGGGACATGTGTTTTCTGGGAAACAGAGTAAAATTGACAGT
GAGACTGTTGGCGAATTTGCAAAACAGATTAGCAAGTTGACGTCCAATAC
ATCACTTATCAACAACAAGCAAACTGTTCAAAATTTAATCAAAGTTCTTG
AAAAAATTATTAACATTCAAAACACAAAAATTGAGGTACGGTGTCCCGCA
GAAAAGATTATCAAAACTATAGACGAGATTTATCACTTCAAATCGATTCA
AGTGGGTGAGGTGCAAAATTTTTCATGTATCTATGGTCAAACAGACGAAG
CTAAAAAACTTGAAAGAGCAACAATATTGTCTCGAGCATGTGCGTTCGTC
AACGGATCAAAAAGTGTAGCACAATGGGAACCACTCGACATATCCTCATG
CAGAAGGAACGATCAGGAAAAGCAACTTCTAAATGTTGATTTGATGCATC
TTGAAAGGTGATATTTTCATTTATTCGACGATCATTCCAATCACATGTAT
CATTTTTTTCAACCTCATTGTTTTCATAATGGTCATGCGCAAAGTTCATG
GTCATTTCAAAACACGTGCTTCATTTCAACAAAAAGAAGACAAGCAGATC
TGGAAAAGAGCGAAGGCTACAATGATCTGTATGGTTCTATTAGGATTGAC
CTGGATTTTCGGATTCATGGCTGTTGGTGATTTACATGCTCCTTTACAAT
GGCTGTTTTGTATCACGAACACTTTACAAGGTGTTTTTGTTTTTGTTTTC
TACGTTCTCCTCAATGATGAAGTGCGAAAAGCTTGGAATTCAAGATAGGC
TTACCGATGGTCGCTGCTGCAGTAACGTCAAGATTTACCAAAAGCCAATT
TGACAGACCTGACAATGAACTGCAAAGAAAAACCCGTCGTAAAACCGGTC
AATTTATGATCATAAATTTCTGCATAGCTTTGGTTCTTCTTCTTTGTGTG
TTTATACTCATCACCAATATGGAACACTTTCATCATTCTTCAACTATTTT
ATGCCACAACTTGTCTGCCATCTTACATTTCACGATTATGGCAACTTTCT
GTTGGACGGCCGCCCAAGCGATCTTTTTGTATAAGAAAACTGTTCTGGCG
ACCAAGAATTTTCAAGGAGATAACATGAAAAGCTACTATGCAAGTCTCTG
TCTTGCTTGGGACGGAAACTATTGGTCAACTCGTGGTTGCACAACCTTAG
TGAATTCGAAAAATGAGGTCACATGTGAATGCAATCATTTGACAAATTTC
GCCATTCTTTTCAATGTGTATCATGTAGATGAAGATGTGTTGAAATCGCA
AGAAGTTTTGAATTATGTTAGTCTTGTTGGTTGTGTTCTATCCATCGTTG
GATTATTGGCCACTGTTATTGCTCTTGGTTGTTCGACTGGGTCAAAGAAA
ACGTTTTGAAGATTCTGGACAACATCATACCAATCAACGATTCAATTATT
CCAAACGAAAACAAAAATCAACTTCTTAGTTTTGTTGACAAAATCACAGA
AAACATTCAACAACCTTCGTTCAATTATTCCGGACAAAATCTCGCTGTTT
CGATCCAAACGCAGAACAGGTCGCAAGCAACAAATATAAAAAGTTTTGAC
AATGATGAGAAAATTGAAATTGAGTTCAATAATTATGACAACCTTACCGT
TGTTGGCAATATTAGTCAAGTGTCTTCCATATATATCCCAGAAACGACTT
TCACTGATATACTAAGCGACATCAAAATCATATCTACTGCATATAAAAAA
GACACTTTTTTCAGTACAACGCCATCAAACAAAACACAAACTGGCAGTTA
CATTATGTCAGCATCAATCAAGAGTCAGCATATTGAGAATTTGACAGATC
CAATAAAATTGAAATTTAAAATCGATGAAAGAAAGTCAAACGGGACATGT
GTTTTCTGGGAAACAGAGTAAAATTGACAGTGAGACTGTTGGCGAATTTG
CAAAACAGATTAGCAAGTTGACGTCCAATACATCACTTATCAACAACAAG
CAAACTGTTCAAAATTTAATCAAAGTTCTTGAAAAAATTATTAACATTCA
AAACACAAAAATTGAGGTACGGTGTCCCGCAGAAAAGATTATCAAAACTA
TAGACGAGATTTATCACTTCAAATCGATTCAAGTGGGTGAGGTGCAAAAT
TTTTCATGTATCTATGGTCAAACAGACGAAGCTAAAAAACTTGAAAGAGC
AACAATATTGTCTCGAGCATGTGCGTTCGTCAACGGATCAAAAAGTGTAG
CACAATGGGAACCACTCGACATATCCTCATGCAGAAGGAACGATCAGGAA
AAGCAACTTCTAAATGTTGATTTGATGCATCTTGAAAGGTGATATTTTCA
TTTATTCGACGATCATTCCAATCACATGTATCATTTTTTTCAACCTCATT
GTTTTCATAATGGTCATGCGCAAAGTTCATGGTCATTTCAAAACACGTGC
TTCATTTCAACAAAAAGAAGACAAGCAGATCTGGAAAAGAGCGAAGGCTA
CAATGATCTGTATGGTTCTATTAGGATTGACCTGGATTTTCGGATTCATG
GCTGTTGGTGATTTACATGCTCCTTTACAATGGCTGTTTTGTATCACGAA
CACTTTACAAGGTGTTTTTGTTTTTGTTTTCTACGTTCTCCTCAATGATG
AAGTGCGAAAAGCTTGGAATTCAAGATAGGCTTACCGATGGTCGCTGCTG
CAGTAACGTCAAGATTTACCAAAAGCCAATTTGACAGACCTGACAATGAA
CTGCAAAGAAAAACCCGTCGTAAAACCGGTCAATTTATGATCATAAATTT
CTGCATAGCTTTGGTTCTTCTTCTTTGTGTGTTTATACTCATCACCAATA
TGGAACACTTTCATCATTCTTCAACTATTTTATGCCACAACTTGTCTGCC
ATCTTACATTTCACGATTATGGCAACTTTCTGTTGGACGGCCGCCCAAGC
GATCTTTTTGTATAAGAAAACTGTTCTGGCGACCAAGAATTTTCAAGGAG
ATAACATGAAAAGCTACTATGCAAGTCTCTGTCTTGCTTGGGACGGAAAC
TATTGGTCAACTCGTGGTTGCACAACCTTAGTGAATTCGAAAAATGAGGT
CACATGTGAATGCAATCATTTGACAAATTTCGCCATTCTTTTCAATGTGT
ATCATGTAGATGAAGATGTGTTGAAATCGCAAGAAGTTTTGAATTATGTT
AGTCTTGTTGGTTGTGTTCTATCCATCGTTGGATTATTGGCCACTGTTAT
TGCTCTTGGTTGTTCGACTGGGTCAAAGAAAACGTTTTGAAGATTCTGGA
CAACATCATACCAATCAACGATTCAATTATTCCAAACGAAAACAAAAATC
AACTTCTTAGTTTTGTTGACAAAATCACAGAAAACATTCAACAACCTTCG
TTCAATTATTCCGGACAAAATCTCGCTGTTTCGATCCAAACGCAGAACAG
GTCGCAAGCAACAAATATAAAAAGTTTTGACAATGATGAGAAAATTGAAA
TTGAGTTCAATAATTATGACAACCTTACCGTTGTTGGCAATATTAGTCAA
GTGTCTTCCATATATATCCCAGAAACGACTTTCACTGATATACTAAGCGA
CATCAAAATCATATCTACTGCATATAAAAAAGACACTTTTTTCAGTACAA
CGCCATCAAACAAAACACAAACTGGCAGTTACATTATGTCAGCATCAATC
AAGAGTCAGCATATTGAGAATTTGACAGATCCAATAAAATTGAAATTTAA
AATCGATGAAAGAAAGTCAAACGGGACATGTGTTTTCTGGGAAACAGAGT
AAAATTGACAGTGAGACTGTTGGCGAATTTGCAAAACAGATTAGCAAGTT
GACGTCCAATACATCACTTATCAACAACAAGCAAACTGTTCAAAATTTAA
TCAAAGTTCTTGAAAAAATTATTAACATTCAAAACACAAAAATTGAGGTA
CGGTGTCCCGCAGAAAAGATTATCAAAACTATAGACGAGATTTATCACTT
CAAATCGATTCAAGTGGGTGAGGTGCAAAATTTTTCATGTATCTATGGTC
AAACAGACGAAGCTAAAAAACTTGAAAGAGCAACAATATTGTCTCGAGCA
TGTGCGTTCGTCAACGGATCAAAAAGTGTAGCACAATGGGAACCACTCGA
CATATCCTCATGCAGAAGGAACGATCAGGAAAAGCAACTTCTAAATGTTG
ATTTGATGCATCTTGAAAGGTGATATTTTCATTTATTCGACGATCATTCC
AATCACATGTATCATTTTTTTCAACCTCATTGTTTTCATAATGGTCATGC
GCAAAGTTCATGGTCATTTCAAAACACGTGCTTCATTTCAACAAAAAGAA
GACAAGCAGATCTGGAAAAGAGCGAAGGCTACAATGATCTGTATGGTTCT
ATTAGGATTGACCTGGATTTTCGGATTCATGGCTGTTGGTGATTTACATG
CTCCTTTACAATGGCTGTTTTGTATCACGAACACTTTACAAGGTGTTTTT
GTTTTTGTTTTCTACGTTCTCCTCAATGATGAAGTGCGAAAAGCTTGGAA
TTCAAGATAGGCTTACCGATGGTCGCTGCTGCAGTAACGTCAAGATTTAC
CAAAAGCCAATTTGACAGACCTGACAATGAACTGCAAAGAAAAACCCGTC
GTAAAACCGGTCAATTTATGATCATAAATTTCTGCATAGCTTTGGTTCTT
CTTCTTTGTGTGTTTATACTCATCACCAATATGGAACACTTTCATCATTC
TTCAACTATTTTATGCCACAACTTGTCTGCCATCTTACATTTCACGATTA
TGGCAACTTTCTGTTGGACGGCCGCCCAAGCGATCTTTTTGTATAAGAAA
ACTGTTCTGGCGACCAAGAATTTTCAAGGAGATAACATGAAAAGCTACTA
TGCAAGTCTCTGTCTTGCTTGGGACGGAAACTATTGGTCAACTCGTGGTT
GCACAACCTTAGTGAATTCGAAAAATGAGGTCACATGTGAATGCAATCAT
TTGACAAATTTCGCCATTCTTTTCAATGTGTATCATGTAGATGAAGATGT
GTTGAAATCGCAAGAAGTTTTGAATTATGTTAGTCTTGTTGGTTGTGTTC
TATCCATCGTTGGATTATTGGCCACTGTTATTGCTCTTGGTTGTTCGACT
GGGTCAAAGAAAACGTTTTGAAGATTCTGGACAACATCATACCAATCAAC
GATTCAATTATTCCAAACGAAAACAAAAATCAACTTCTTAGTTTTGTTGA
CAAAATCACAGAAAACATTCAACAACCTTCGTTCAATTATTCCGGACAAA
ATCTCGCTGTTTCGATCCAAACGCAGAACAGGTCGCAAGCAACAAATATA
AAAAGTTTTGACAATGATGAGAAAATTGAAATTGAGTTCAATAATTATGA
CAACCTTACCGTTGTTGGCAATATTAGTCAAGTGTCTTCCATATATATCC
CAGAAACGACTTTCACTGATATACTAAGCGACATCAAAATCATATCTACT
GCATATAAAAAAGACACTTTTTTCAGTACAACGCCATCAAACAAAACACA
AACTGGCAGTTACATTATGTCAGCATCAATCAAGAGTCAGCATATTGAGA
ATTTGACAGATCCAATAAAATTGAAATTTAAAATCGATGAAAGAAAGTCA
AACGGGACATGTGTTTTCTGGGAAACAGAGTAAAATTGACAGTGAGACTG
TTGGCGAATTTGCAAAACAGATTAGCAAGTTGACGTCCAATACATCACTT
ATCAACAACAAGCAAACTGTTCAAAATTTAATCAAAGTTCTTGAAAAAAT
TATTAACATTCAAAACACAAAAATTGAGGTACGGTGTCCCGCAGAAAAGA
TTATCAAAACTATAGACGAGATTTATCACTTCAAATCGATTCAAGTGGGT
GAGGTGCAAAATTTTTCATGTATCTATGGTCAAACAGACGAAGCTAAAAA
ACTTGAAAGAGCAACAATATTGTCTCGAGCATGTGCGTTCGTCAACGGAT
CAAAAAGTGTAGCACAATGGGAACCACTCGACATATCCTCATGCAGAAGG
AACGATCAGGAAAAGCAACTTCTAAATGTTGATTTGATGCATCTTGAAAG
GTGATATTTTCATTTATTCGACGATCATTCCAATCACATGTATCATTTTT
TTCAACCTCATTGTTTTCATAATGGTCATGCGCAAAGTTCATGGTCATTT
CAAAACACGTGCTTCATTTCAACAAAAAGAAGACAAGCAGATCTGGAAAA
GAGCGAAGGCTACAATGATCTGTATGGTTCTATTAGGATTGACCTGGATT
TTCGGATTCATGGCTGTTGGTGATTTACATGCTCCTTTACAATGGCTGTT
TTGTATCACGAACACTTTACAAGGTGTTTTTGTTTTTGTTTTCTACGTTC
TCCTCAATGATGAAGTGCGAAAAGCTTGGAATTCAAGATAGGCTTACCGA
TGGTCGCTGCTGCAGTAACGTCAAGATTTACCAAAAGCCAATTTGACAGA
CCTGACAATGAACTGCAAAGAAAAACCCGTCGTAAAACCGGTCAATTTAT
GATCATAAATTTCTGCATAGCTTTGGTTCTTCTTCTTTGTGTGTTTATAC
TCATCACCAATATGGAACACTTTCATCATTCTTCAACTATTTTATGCCAC
AACTTGTCTGCCATCTTACATTTCACGATTATGGCAACTTTCTGTTGGAC
GGCCGCCCAAGCGATCTTTTTGTATAAGAAAACTGTTCTGGCGACCAAGA
ATTTTCAAGGAGATAACATGAAAAGCTACTATGCAAGTCTCTGTCTTGCT
TGGGACGGAAACTATTGGTCAACTCGTGGTTGCACAACCTTAGTGAATTC
GAAAAATGAGGTCACATGTGAATGCAATCATTTGACAAATTTCGCCATTC
TTTTCAATGTGTATCATGTAGATGAAGATGTGTTGAAATCGCAAGAAGTT
TTGAATTATGTTAGTCTTGTTGGTTGTGTTCTATCCATCGTTGGATTATT
GGCCACTGTTATTGCTCTTGGTTGTTCGACTGGGTCAAAGAAAACGTTTT
GAAGATTCTGGACAACATCATACCAATCAACGATTCAATTATTCCAAACG
AAAACAAAAATCAACTTCTTAGTTTTGTTGACAAAATCACAGAAAACATT
CAACAACCTTCGTTCAATTATTCCGGACAAAATCTCGCTGTTTCGATCCA
AACGCAGAACAGGTCGCAAGCAACAAATATAAAAAGTTTTGACAATGATG
AGAAAATTGAAATTGAGTTCAATAATTATGACAACCTTACCGTTGTTGGC
AATATTAGTCAAGTGTCTTCCATATATATCCCAGAAACGACTTTCACTGA
TATACTAAGCGACATCAAAATCATATCTACTGCATATAAAAAAGACACTT
TTTTCAGTACAACGCCATCAAACAAAACACAAACTGGCAGTTACATTATG
TCAGCATCAATCAAGAGTCAGCATATTGAGAATTTGACAGATCCAATAAA
ATTGAAATTTAAAATCGATGAAAGAAAGTCAAACGGGACATGTGTTTTCT
GGGAAACAGAGTAAAATTGACAGTGAGACTGTTGGCGAATTTGCAAAACA
GATTAGCAAGTTGACGTCCAATACATCACTTATCAACAACAAGCAAACTG
TTCAAAATTTAATCAAAGTTCTTGAAAAAATTATTAACATTCAAAACACA
AAAATTGAGGTACGGTGTCCCGCAGAAAAGATTATCAAAACTATAGACGA
GATTTATCACTTCAAATCGATTCAAGTGGGTGAGGTGCAAAATTTTTCAT
GTATCTATGGTCAAACAGACGAAGCTAAAAAACTTGAAAGAGCAACAATA
TTGTCTCGAGCATGTGCGTTCGTCAACGGATCAAAAAGTGTAGCACAATG
GGAACCACTCGACATATCCTCATGCAGAAGGAACGATCAGGAAAAGCAAC
TTCTAAATGTTGATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004982XLOC_004982Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008900-proteinTCONS_00008900-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008900-exon-sc0000088-1575043694:374356..374614TCONS_00008900-exon-sc0000088-1575043694:374356..374614Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1575043694:373843..373992TCONS_00008900-exon-sc0000088-1575043694:373843..373992Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1575043694:372753..373278TCONS_00008900-exon-sc0000088-1575043694:372753..373278Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1575043694:372302..372530TCONS_00008900-exon-sc0000088-1575043694:372302..372530Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1575043694:371081..371370TCONS_00008900-exon-sc0000088-1575043694:371081..371370Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1575043694:370847..370919TCONS_00008900-exon-sc0000088-1575043694:370847..370919Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1575043694:369740..370483TCONS_00008900-exon-sc0000088-1575043694:369740..370483Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1510915933:374356..374614TCONS_00008900-exon-sc0000088-1510915933:374356..374614Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1510915933:373843..373992TCONS_00008900-exon-sc0000088-1510915933:373843..373992Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1510915933:372753..373278TCONS_00008900-exon-sc0000088-1510915933:372753..373278Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1510915933:372302..372530TCONS_00008900-exon-sc0000088-1510915933:372302..372530Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1510915933:371081..371370TCONS_00008900-exon-sc0000088-1510915933:371081..371370Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1510915933:370847..370919TCONS_00008900-exon-sc0000088-1510915933:370847..370919Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1510915933:369740..370483TCONS_00008900-exon-sc0000088-1510915933:369740..370483Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1491911889:374356..374614TCONS_00008900-exon-sc0000088-1491911889:374356..374614Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1491911889:373843..373992TCONS_00008900-exon-sc0000088-1491911889:373843..373992Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1491911889:372753..373278TCONS_00008900-exon-sc0000088-1491911889:372753..373278Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1491911889:372302..372530TCONS_00008900-exon-sc0000088-1491911889:372302..372530Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1491911889:371081..371370TCONS_00008900-exon-sc0000088-1491911889:371081..371370Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1491911889:370847..370919TCONS_00008900-exon-sc0000088-1491911889:370847..370919Clytia hemisphaericaexon
TCONS_00008900-exon-sc0000088-1491911889:369740..370483TCONS_00008900-exon-sc0000088-1491911889:369740..370483Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088supercontigsc0000088:369740..374614 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.854232	0	0	0	0	0.157558	0.189421	0.77639	3.33081	0.335838	0.267888	0.740423	0.670064	0.870482	0.427115	0.702848	0.289445	5.53604	4.03524	0	0	0.251099	0	1.5042	1.26682	0	0	0.486287	0.495302
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR000203GPS
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
Blast
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BLAST of TCONS_00008900 vs. Swiss-Prot (Human)
Match: AGRG6 (Adhesion G-protein coupled receptor G6 OS=Homo sapiens GN=ADGRG6 PE=1 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 7.471e-38
Identity = 152/612 (24.84%), Postives = 289/612 (47.22%), Query Frame = 2 
Query:  146 SRACAFVNGSKSVAQWEPLDISSCRR--NDQEKQLLNV--DLSKIDSETVGEFAKQISKLTSNTSLINNKQTVQNLIKVLEKIINIQNTKIEVKENVLKXXXXXXXXXXXXXXXXXKNQLLSFVDKITENIQQPS---FNYSGQNLAVSIQTQNRSQATN-IKSF------DNDEKIEIEFNNYDNLTVVGNISQVSSIYIPETTFTDILSDIKIIS-----TAYKKDTFFSTTPSNKTQTGSYIMSASIKSQHIENLTDPIKLKFKIDERKS--NGTCVFWETDGNY----WSTRGCTTLVNS-KNEVTCECNHLTNFAILFNVYHVDEDV-LKSQEVLNYVSLVGCVLSIVGLLATVIALGCSTGQRKTRRKTGQFMIINFCIALVLLLCVFILITNMEHFHHSSTILCHNLSAILHFTIMATFCWTAAQAIFLYKKTVLATKNFQGDNMKSYYASLCL-AWGLP--MVAAAVTSR-----FTKSQFDRP-DNELCILKGDXXXXXX-XXXXXXXXXXXXXVFIMVMRKVHGHFKTRASFQQKEDKQIWKRAKATMICMVLLGLTWIFGFMAVGDLHAPLQWLFCITNTLQGVFVFVFYVLLNDEVRKAW 1870
            SR C +   +  V  W P+DIS+C +  N+   Q+LN+  D   + S  +    +Q+ ++      +N ++ +          I + +T + +  N+L   D+ +  + S          L  +D++   I   S    N + +NLA+S+ +      TN I +F      +N+   +++F +       G +  ++S+ +P     ++  +  ++      T + K   F      +    SY+M+ SI +  I+NL DP+++K K    +   +  C FW+ + N     W+T GC    +S  +E  C CNH T+F +L ++      +  ++ +VL ++S +GC +S +   AT++         K RR     +++N   AL+ L  +F+L   +  F+     LC  ++ +LHF ++ATF W   +AI +Y   V     +    ++ Y    C+  WGLP  +V+  + SR     + K  + +   +E C ++  +  Y T       + F N+ +FI+VM ++ G    R++   +E  ++ +  ++ +    LLG+TW F F A G L+ P  +LF I N+LQG+F+F+F+  + + V+K W
Sbjct:  557 SRICFYNATNPLVTYWGPVDISNCLKEANEVANQILNLTADGQNLTSANITNIVEQVKRI------VNKEENID---------ITLGSTLMNIFSNILSSSDSDLLESSSEA--------LKTIDELAFKIDLNSTSHVNITTRNLALSVSS--LLPGTNAISNFSIGLPSNNESYFQMDFES-------GQVDPLASVILPPNLLENLSPEDSVLVRRAQFTFFNKTGLFQDVGPQRKTLVSYVMACSIGNITIQNLKDPVQIKIKHTRTQEVHHPICAFWDLNKNKSFGGWNTSGCVAHRDSDASETVCLCNHFTHFGVLMDLPRSASQLDARNTKVLTFISYIGCGISAIFSAATLLTY---VAFEKLRRDYPSKILMNLSTALLFLNLLFLLDGWITSFNVDG--LCIAVAVLLHFFLLATFTWMGLEAIHMYIALVKVFNTY----IRRYILKFCIIGWGLPALVVSVVLASRNNNEVYGKESYGKEKGDEFCWIQDPVIFYVTCAGYFGVMFFLNIAMFIVVMVQICGRNGKRSNRTLRE--EVLRNLRSVVSLTFLLGMTWGFAFFAWGPLNIPFMYLFSIFNSLQGLFIFIFHCAMKENVQKQW 1125
The following BLAST results are available for this feature:
BLAST of TCONS_00008900 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRG67.471e-3824.84Adhesion G-protein coupled receptor G6 OS=Homo sap... [more]
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