TCONS_00008849 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008849
Unique NameTCONS_00008849
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1474

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008849 ID=TCONS_00008849|Name=TCONS_00008849|organism=Clytia hemisphaerica|type=transcript|length=1474bp
tacgcatgcgttttaaaacaGCTGTGAAATTATTGTCTCGCTTAACGAAG
TAAATCAATNNGGTACATAACACATGATCAAAGCAAAAGTAAAGCGTAGA
CCCTAGAGAAAAAAGTTACTTTGAGGAAGGGGATGGGATATAgcctgaaa
aaaatttaaaatctctcCTATTCAGACAAAATGTAAGGAAACTAATGAGT
TTATAAAGGTAAGCGAGNCCAAACCTGGTCATTGCAGTCTGTTATATTGC
ATTGCTGATTGGGACGTCTTTTATGTATTATCAGCCTTACTACAGgagGA
TTGCGCCATCTGAAGCTGACGAAGAAGCAAAAGAAGAAGCCTACGTAGAA
ACAGTGAAAATGATTCTTCAAAGTGATaatgaagaagatgaagatgaaaa
acatGGCAGGAaaaaaagtctgtctcaaacAATCAAATCTTCCAGATTTT
ATAAAGTTATTACGGATACAAATTTTCTCGTATGCGCATCATCTTATTCC
CTGTTTGGTTTCACTGCTACTGGCTTCAATCAACTGTATCCGTTATGGGC
TTCAACCATCAAAGTGTATGgtgGTTTGAATTTCACTACCCAGCAGATTG
GcaaaacattgatgtatgcttgcATCCCTTTGATCTTTTTCCTTGTCATC
ATAATATCGAAGctGACACATTGGCTTGGAATCAAAAAGATGTATCTACT
GAATTTGTTCATGTTATCAATTGTTTTTGCTGCTTTCCCTTTCTTgtcca
aaattcaaaatgaGAGTTATCTTTGGCTATTCATTATATTATCACTGATA
TTAGTTCGAATATCGGTTGGTTGTTGTTTTACTGCAGCATGTGTGATAGT
TGCAAATTGTGTGGATAGATCAATGTTGGGTACAGCTTATGGTTTATTTA
ACGCTGCTTTGAATTTAGCCAGTGCGTTGGCTCCATCAGCAACTGGTACA
TCATTTTCATGGTCATTGCTCAACGTGAAAGGTGTTCCAACAAATCACCA
TCCACTGGGTTTTCCCTTTGATCAACATTTCGCCTTCTTACTGATGGCTT
TGATGACATTCATAGCAACGATCATTGTTCTCTTTATCAGATATGACGAg
gaccaaaaagaaaaagtttaaaattacgCTTTTTTGTGGATGGATAACAG
TTTGAATTGGCTCTCCCTCATTCGATCTTCAACTGACCAAGAATCGTAAG
GCTACAGAGAAAGTTGTTTACGGGTCCAATGTTTAAGgtcgaattacaaa
aatattcgATAAATCAGAGGGagttaatttcatttcattaaaaCTTTATT
TACAAATAGACTcaacataaaaaaatttgattaaaaatcgTTGGCCCCCT
TTCATAGATGAGTAATATGAAAATTTATAccatatttttgtaatttagaG
ACTACAGTACGCTTATTAAAGAGCAGTGATTTCAAGTGTAcaatttcgaa
aattgaagttagcCTCAGGGGGGG
Run BLAST on NCBI

protein sequence of TCONS_00008849-protein

>TCONS_00008849-protein ID=TCONS_00008849-protein|Name=TCONS_00008849-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
MYYQPYYRRIAPSEADEEAKEEAYVETVKMILQSDNEEDEDEKHGRKKSL
SQTIKSSRFYKVITDTNFLVCASSYSLFGFTATGFNQLYPLWASTIKVYG
GLNFTTQQIGKTLMYACIPLIFFLVIIISKLTHWLGIKKMYLLNLFMLSI
VFAAFPFLSKIQNESYLWLFIILSLILVRISVGCCFTAACVIVANCVDRS
MLGTAYGLFNAALNLASALAPSATGTSFSWSLLNVKGVPTNHHPLGFPFD
QHFAFLLMALMTFIATIIVLFIRYDEDQKEKV
Run BLAST on NCBI

transcript from alignment at sc0000088:343458..352521+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008849 ID=TCONS_00008849|Name=TCONS_00008849|organism=Clytia hemisphaerica|type=transcript|length=9064bp|location=Sequence derived from alignment at sc0000088:343458..352521+ (Clytia hemisphaerica)
tacgcatgcgttttaaaacaGCTGTGAAATTATTGTCTCGCTTAACGAAG
TAAATCAATNNGGTACATAACACATGATCAAAGCAAAAGTAAAGCGTAGA
CCCTAGAGAAAAAAGTTACTTTGAGGAAGGGGATGGGATATAgcctgaaa
aaaatttaaaatctctcCTATTCAGACAAAATGTAAGGAAACTAATGAGT
TTATAAAGGTAAGCGAGNCCAAACCTGGTCATTGCAGTCTGTTATATTGC
ATTGCTGATTGGGACGTCTTTTATGTATTATCAGCCTTACTACAGGTATG
tcaatttaaaagttttgtttttaaactgagattgatatcgtttgcttact
catcaattctaattcacaagctttttcacattggattgacacagatgtga
aGCAAgagtaaaagaaaaataattttatacacTGTCTTGATACGAAATAT
GNGATAATTgttgtgtcataaaaatctgctctcccacacaaattttgcgc
cccctaCTGGAATCTGGATTTTTATAGGATATAAAAATTACCCCGTTTTT
TTTACTCCTTTCTATTTCAATCGCGCTTCTAATTTTATTCCTCAATTTGA
AATTTACAAAGAATTTAAGTTAGTTCGACGCTTTGCTGTCGGGATTTCTT
GTACTGAGTTataaaaagtcatattttttctgttttgtttatgtgGTTTC
TTACATTATATACTTTCCTGTCAAAactctttttttcatatttaaggctt
tttggcTTTCCCGGATGATATTTTCAATGGAATATTCAAAAGtcagtata
tattttcttcGACCTAAATAGCTTTAATATGACATTTANTTTGGCTTATT
TTCCCCAGtagcgacctggcttaattttctgggggtgcaaactatgaaat
tggcgcccccggtattttttgtccttacttgcgccctccattattaagtg
aaaatattaaactgtaagagcagtatggttgaaagtaacgcccggaatct
ttgagtcaagaaacttggaatttgttttttgtaatttgaaatgttaagGT
GTTTTGACATTAGCAGAtgctaaggaggcgccaccatggtttgcgccgac
gggcgaaaattacaatatttttcacccccattttagctaaaagacacttt
gttttgacaaatttcttttaagaagtactttttcaaaccactctgatgag
ctgtgagagccactaatctacttccctcaCCTANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNccccccccccctagaatcctccaccccctagtagatactt
tatgaccgctccctaAGCATACAAGTAATAATTTTTTGTatgaattttga
gaatttttattttttatataaatatttGTTCGTTTATTTGGACACACTGT
ATGCAAAAACGGAAATATAAATCGGTATAAAGGAAAACCCCATTATCAAT
GGTATCCTTAGGATCTGTAGTATATTCTCTGGAcgcataaatttattttt
caggagGATTGCGCCATCTGAAGCTGACGAAGAAGCAAAAGAAGAAGCCT
ACGTAGAAACAGTGAAAATGATTCTTCAAAGTGATaatgaagaagatgaa
gatgaaaaacatGGCAGGAaaaaaagtctgtctcaaacAATCAAATCTTC
CAGATTTTATAAAGTTATTACGTGAGTACAAATGTGTTTTTTGCTAGCCA
TAATTAGGCTCAGAATTGGATCTTAAATGGCGGTTTAAAAATAGGGgtat
ttaggcaaaaatgggcACTGTGCATATGCGTGCCTTAAGGGTTTGGTTAT
CACCttcccaaagtctctctaagggttaccaaaacaacaaaaactaacaa
cagtctctctaaggggtCGGTTTTTTTTACAAACTGAAGTTAAAAAAGAG
TGAAAAGTCAAGAAAGtaagaaagttttttgaaagtattggagaatttat
tttgaaaatcgaaaaaatctttATGAAAACGTCTCTCTTATGGTCacctt
tttaacaatttttcacGACGCAATTATAAAAGCTCCCTTACGAAAATTAT
GTTTAAAGTCAGTTCACTTTAAGTGTGAACTTTTATTTACTATACCATGT
GGTAATTAGTGTTTTCTACATTGTAGCAGGGTGGTAGCAAAAAAAGANAA
GTCAGTTCGCTTTAAGTGTGAACTTTTATTTACTATACCATGTGGTAATT
AGTGTTTTCTACATTGTAGCAGGGTGGTAGCAAAAAAAGAGTGCGAAGGA
CTTAAAGGTTTTCTACGGGAATAAAAGGAGATTATTTTAGGAAGTGTGTT
CATGCTGAGGCAGATAaattaaagctacttttttacacaacgatatcctg
caaacaagtgaaaaattgaaagttgtttcgagatgtgaccTAACATTCTA
ttacttttgtaaacaaaaaaaaagttgatttcaattcatgatattcatga
cgtaatgttttctacggaaagaccccggtttttgccagtagtagcaaatt
ttatacaacttttgtctagtttaaatttgccacaaCTGGCTAATACCAGT
TTTTACAATTGAATAAACAATTGTTTACAAAAGTAATATAATGTAAggtc
acatctcgaaacaactttcgatctttcactTGCCTGGAGGCGGCCTGGAG
GATATCGTTGCGTAAATAAGTAGCTTTTTATTATCTGACTCAGCATGAAG
ACACTTCAAATTCTGTCGCTTTCTTTTACCCCCAAATACAGTCTTTAATT
GTTGTTCATTAAAAGGAGTTGAGAAAGTAATACTTTGATCTTATATGTAG
GGATACAAATTTTCTCGTATGCGCATCATCTTATTCCCTGTTTGGTTTCA
CTGCTACTGGCTTCAATCAACTGTATCCGTTATGGGCTTCAACCATCAAA
GTGTATGGTATGTATTCCTTTAGCTCATTCTCCCGCCTGCCTACcttatc
attttttttatgaaatgagaattttgacaattttttatgTTTGCTAATTT
ACCTCATTCAACTCTACACCTACTGCTTATTGGTTTATTTTTGGAAGCAA
CAATCATCAATTAACAGCACCGACAAACAACAAACTTAGACAAGCAATTA
GATTAAATAAGATAACTAACAACaacaataaacaaaataaacaaagacgG
TCTAAGATCTTTTTTATCGTCCAATACACCTGCCAACTAtctttttagtt
atttttttgCGATGacaaaatgagaatttttaatGTCGCCGTGTGTTGAC
GGCGATTAAATCCGTTTGTATTTCTGTGTCGGTGAGCCCCATACTCCCAA
CACAATTAAGCACGTAGAATACCATGTAGAATATCATTTTTGATATACAT
ATATTCAATATCTCGAATcgttacccagctggcacacaatgttgtttcaa
cgtttatgtaACGTTCAcagcgtccatataacgttaaatgaacgttgaaa
caacgttgtgtgccagctgagtATTACTTGAAATGAACACGTTTGATGGT
CATTTCAGTTGACAATACTTTTTAAACCTTTCTTCATAACCCGAAACTTG
CTTAAATCGAACAGATTTGTGTTCCCTTTGCGTATTCGAGTTAAGACTct
acgtaatagttatcggacagttgcgagtacaacatgagaaatattttacg
agttcggAGATTTTCCCGTacaatatatgaaaaaaatccagaacgagtga
aatatttccatattgtacgagcaaatgtctgataactggtttatcggtga
cccaaaaatgcactttttgtgttggaaaaaagcgcagggcacttttgtaa
cAAAGGGACTagatagacgatgctatcgtccgtttaaaggtcagtaaacg
cgggaaaaaaTTCGGGCGttagggcggtttacgggaaaaaagtgacggta
gagttttggaacaaactccacccgaatttatcacgcctctcctaaactat
tcccttttttagtgatcttgtgtagacgataggatcgtctagacGTTAGA
TTactgctaccgctacaatgcaacgacgtcttttcgtcaatttatatttt
tacatgtaaaatacaagatatattgtacacttttaaaccaatcagattgc
ttatattttttggatcgccgataatgtattgtattctttttgaaatattt
taggtgGTTTGAATTTCACTACCCAGCAGATTGGcaaaacattgatgtat
gcttgcATCCCTTTGATCTTTTTCCTTGTCATCATAATATCGAAGGTGAG
TGAACCaagcatttcaaaaaatagatCTTTCCCAACGATACGGAGACTAA
TTTTTACAGGTAAAATATTCTATGCAccatgggggggggggactttcCTT
GACGTACCGTTGAAACTTTAAAAGTAGATCCTGtcaaaaatgaatgtttc
aaaaaatttggatagaTTCTCCCATTGTCAAGCTGAAAAGAGTTAAAAAG
ACtaaaatttccaccctgaaaattaaCAGAGCCTAAAAAATGGACTCTGA
TCAGTGACCCAATTTTGCCTTGGTGCCCCCTCCCGGCTCTATACGACTGA
TTCTGAAATTGTTGaaactaaacaaaaaaatggaggGGACAAATTTCGAC
CTGATATTACCATGTAACCCTTACGTGTGTGGGGGGGGgattcatgcaaa
aaaaaaaacaattaaaatttgcaaaaactgCCGCACAAAGGGTAGTAATT
CCCTGAGACTGAGCTAttaaagcaatttttttaaagtacaCGGTTTGAGt
ctgaaagtttttgtttttaattttagctGACACATTGGCTTGGAATCAAA
AAGGTAGGTCTacaaaatgaaatatatttgacAGAATTCTTTACTCAGAA
TAGTGGGGGGATGGGAACTCACAATAATGGGGCATTGGTACAAAAGTAAC
CTCGTTGTTGATGAGCCACAAGTGAAAACGCATTGCTGTCGAAGTTGAAA
TGATAATAGCTGATTGctattttttttgaatactttTGCATTTCAGATGT
ATCTACTGAATTTGTTCATGTTATCAATTGTTTTTGCTGCTTTCCCTTTC
TTgtccaaaattcaaaatgagtaagttttttaaattgtgacatttttaat
taaaaaaagctATTGGGATTACCTTTTTTCGATCGATATATCTTTGtgac
cgggtagctcagtcggtagagcattcgcctgacaatctaagggttgtggg
ttcgatccccggtcacctcCAACTCAGTGGAtaagtagcttagattgggt
aatctgatctaagcggtaagttactgggagctgagaatAAGTGTGGCGCT
Ccgcctcagcattcgatctgccaggtctagcgcaaatagaaaaggggata
gactccctcactcccggttccaccgacagccaccagctgaatatacttac
tttacTTACTATATATTTGTTGATGTTTTGAACATTAAAGATATTCATAT
TATTTCCTGAACTCAATTTCATTCTTCTGAAATCAATCAAACGTGTTCTC
ATCCTCACTGAAAGTATTTATTCTTAAACGGCTTGTTTTTTTAGgggttt
tcaaattataaacaaaTCAAGAAGATTATTCAAGTTCTTTTTGGATCAGN
tttcaaattataaacaaaTCAAGAAGATTATTCAAGTTCTTTTTGGATCA
GTCCCTATGGGCACGCAACGTCTTATGGACATTCAATGGACGGCTTTAAG
ACCtttggacgtcctagaaacgtacattagacgtccaaaagacgtttgtt
CCCATTGGGGTTGGCCTTAAGGCTTGGGGTCACGAAATGTtattttcgcg
ttggtgcaatgaaACATGCttcatcccaccaacctgaaacgctttctcgt
gcctccaccccatttttcttttaataacatttgtgcttctctcaTTTTCG
TCCCAGGGGCAagatcagcgtgtcttttgggtatttccctcactttttgt
tccatgaaacaaaacaaaaaaccatTAGACaagcacttttttcttgtgtt
tgtgggatggagcatgtatTGCATCAacgtgaaaaaaaacttctcgtgtc
cccaagcctttagaaTCCAACATCGTTCTTGTATTTTAGGAGTTATCTTT
GGCTATTCATTATATTATCACTGATATTAGTTCGAATATCGGTTGGTTGT
TGTTTTACTGCAGCATGTGTGATAGTTGCAAATTGTGTGGATAGATCAAT
GTTGGGTACAGCTTATGGTTTATTTAACGCTGCTTTGAATTTAGCCAGGT
GTGTAAGATTTAATGAAGATTTTTTGCTACGGTAATAAGTTATATTATCT
ATCGTCCTAGGGCCTTGTCAACCGTCAGAAAAACGCTGCTCGGCAGGTGT
AACACTTGATTAGCTGTTTTAAACCAAGATGCCTGTCAATTACGGAAGAG
CgccttcaaaagtgtttttatatAGAAATGTGTGCATGGATAAGATAAGA
GAACTCAAAAGTGCTttgtaaatcaaaatataatctttttttttcaaggt
tcaaagtgctatttttctcacagagaagattttttttcaccatttttagc
attttgaaAAGGGGGGACCCTATGGTCTGTGACACAGAACTACTCTTATT
TCTGTGGTCGAGTCTTCTCACCAAAAGGATATCTACTCAAACTCCACACC
GATAGACCATTCAGAGACTGACATCTCTCACATCGCTATACCTAcagtga
aaagcacaggtcgaaatcatatatcgacgctgtgccgaccaatccagatt
ctattcagcgcgcaatcaacgtaGAGAAAAGCAACCAtaacgaccatcca
agatcttggatgaagttcaaagttgatatttttattcctttCGTTGAAAA
TACAACTCAAAAAAGTTataaatgctttttaaaaaaagtcagtagagata
gagaatcataacatagaGCCTAtctattattttgattcaatCAAAGTGGC
ATTTctataattaaaagtttagtaattactgttatacatttgggaatcat
gtaaaatatttctttcgaaagaacctcatttcaattacactttgaggttt
ctggggaattcgtaaatagtaaactgcatactgatacagtctgctagaca
ttaatatggtaatgtctgctcttcatctttgattttttctacagtgatta
cttagattgacacatgtgtgataaaatttttatcatttgtcTCCAGAGGT
TGAAATACTCTCAACCACTGATACTCAAGGTACGctatacccccttctca
cagacccactggtaCACCTTCACActggaaaaatttgcaaaaatatcaTT
CCCTGTAGAAAATCCCCattaaattttctgactttaaaaaaaaacagaat
tgaaatccTCAGCCATAGAAAAATGGGAATTTCAATCCACATGGAGTTTC
AATCTGTTATCTTTAacccactggctgaaaatatCCTactgggtttgtga
gaagggggtgtatcgcTAATCGTCCCAGGTATCACAGGAAAAGCCAATCT
CTAGGATGGATGTGAGTTCGGACCCCTGAAATCGTTAGATAAAAAACATT
CTTTCTTTTCAGTGCGTTGGCTCCATCAGCAACTGGTACATCATTTTCAT
GGTCATTGCTCAACGTGAAAGGTGTTCCAACAAATCACCATCCACTGGGT
TTTCCCTTTGATCAACATTTCGCCTTCTTACTGATGGCTTTGATGACATT
CATAGCAACGATCATTGTTCTCTTTATCAGATATGACGAggaccaaaaag
aaaaagtttaaaattacgCTTTTTTGTGGATGGATAACAGTTTGAATTGG
CTCTCCCTCATTCGATCTTCAACTGACCAAGAATCGTAAGGCTACAGAGA
AAGTTGTTTACGGGTCCAATGTTTAAGgtcgaattacaaaaatattcgAT
AAATCAGAGGGagttaatttcatttcattaaaaCTTTATTTACAAATAGA
CTcaacataaaaaaatttgattaaaaatcgTTGGCCCCCTTTCATAGATG
AGTAATATGAAAATTTATAccatatttttgtaatttagaGACTACAGTAC
GCTTATTAAAGAGCAGTGATTTCAAGTGTAcaatttcgaaaattgaagtt
agcCTCAGGGGGGG

Coding sequence (CDS) from alignment at sc0000088:343458..352521+

>TCONS_00008849 ID=TCONS_00008849|Name=TCONS_00008849|organism=Clytia hemisphaerica|type=CDS|length=6792bp|location=Sequence derived from alignment at sc0000088:343458..352521+ (Clytia hemisphaerica)
ATGTATTATCAGCCTTACTACAGgagGATTGCGCCATCTGAAGCTGACGA
AGAAGCAAAAGAAGAAGCCTACGTAGAAACAGTGAAAATGATTCTTCAAA
GTGATaatgaagaagatgaagatgaaaaacatGGCAGGAaaaaaagtctg
tctcaaacAATCAAATCTTCCAGATTTTATAAAGTTATTACGGATACAAA
TTTTCTCGTATGCGCATCATCTTATTCCCTGTTTGGTTTCACTGCTACTG
GCTTCAATCAACTGTATCCGTTATGGGCTTCAACCATCAAAGTGTATGgt
gGTTTGAATTTCACTACCCAGCAGATTGGcaaaacattgatgtatgcttg
cATCCCTTTGATCTTTTTCCTTGTCATCATAATATCGAAGctGACACATT
GGCTTGGAATCAAAAAGATGTATCTACTGAATTTGTTCATGTTATCAATT
GTTTTTGCTGCTTTCCCTTTCTTgtccaaaattcaaaatgaGAGTTATCT
TTGGCTATTCATTATATTATCACTGATATTAGTTCGAATATCGGTTGGTT
GTTGTTTTACTGCAGCATGTGTGATAGTTGCAAATTGTGTGGATAGATCA
ATGTTGGGTACAGCTTATGGTTTATTTAACGCTGCTTTGAATTTAGCCAG
TGCGTTGGCTCCATCAGCAACTGGTACATCATTTTCATGGTCATTGCTCA
ACGTGAAAGGTGTTCCAACAAATCACCATCCACTGGGTTTTCCCTTTGAT
CAACATTTCGCCTTCTTACTGATGGCTTTGATGACATTCATAGCAACGAT
CATTGTTCTCTTTATCAGATATGACGAggaccaaaaagaaaaagtttaaA
TGTATTATCAGCCTTACTACAGgagGATTGCGCCATCTGAAGCTGACGAA
GAAGCAAAAGAAGAAGCCTACGTAGAAACAGTGAAAATGATTCTTCAAAG
TGATaatgaagaagatgaagatgaaaaacatGGCAGGAaaaaaagtctgt
ctcaaacAATCAAATCTTCCAGATTTTATAAAGTTATTACGGATACAAAT
TTTCTCGTATGCGCATCATCTTATTCCCTGTTTGGTTTCACTGCTACTGG
CTTCAATCAACTGTATCCGTTATGGGCTTCAACCATCAAAGTGTATGgtg
GTTTGAATTTCACTACCCAGCAGATTGGcaaaacattgatgtatgcttgc
ATCCCTTTGATCTTTTTCCTTGTCATCATAATATCGAAGctGACACATTG
GCTTGGAATCAAAAAGATGTATCTACTGAATTTGTTCATGTTATCAATTG
TTTTTGCTGCTTTCCCTTTCTTgtccaaaattcaaaatgaGAGTTATCTT
TGGCTATTCATTATATTATCACTGATATTAGTTCGAATATCGGTTGGTTG
TTGTTTTACTGCAGCATGTGTGATAGTTGCAAATTGTGTGGATAGATCAA
TGTTGGGTACAGCTTATGGTTTATTTAACGCTGCTTTGAATTTAGCCAGT
GCGTTGGCTCCATCAGCAACTGGTACATCATTTTCATGGTCATTGCTCAA
CGTGAAAGGTGTTCCAACAAATCACCATCCACTGGGTTTTCCCTTTGATC
AACATTTCGCCTTCTTACTGATGGCTTTGATGACATTCATAGCAACGATC
ATTGTTCTCTTTATCAGATATGACGAggaccaaaaagaaaaagtttaaAT
GTATTATCAGCCTTACTACAGgagGATTGCGCCATCTGAAGCTGACGAAG
AAGCAAAAGAAGAAGCCTACGTAGAAACAGTGAAAATGATTCTTCAAAGT
GATaatgaagaagatgaagatgaaaaacatGGCAGGAaaaaaagtctgtc
tcaaacAATCAAATCTTCCAGATTTTATAAAGTTATTACGGATACAAATT
TTCTCGTATGCGCATCATCTTATTCCCTGTTTGGTTTCACTGCTACTGGC
TTCAATCAACTGTATCCGTTATGGGCTTCAACCATCAAAGTGTATGgtgG
TTTGAATTTCACTACCCAGCAGATTGGcaaaacattgatgtatgcttgcA
TCCCTTTGATCTTTTTCCTTGTCATCATAATATCGAAGctGACACATTGG
CTTGGAATCAAAAAGATGTATCTACTGAATTTGTTCATGTTATCAATTGT
TTTTGCTGCTTTCCCTTTCTTgtccaaaattcaaaatgaGAGTTATCTTT
GGCTATTCATTATATTATCACTGATATTAGTTCGAATATCGGTTGGTTGT
TGTTTTACTGCAGCATGTGTGATAGTTGCAAATTGTGTGGATAGATCAAT
GTTGGGTACAGCTTATGGTTTATTTAACGCTGCTTTGAATTTAGCCAGTG
CGTTGGCTCCATCAGCAACTGGTACATCATTTTCATGGTCATTGCTCAAC
GTGAAAGGTGTTCCAACAAATCACCATCCACTGGGTTTTCCCTTTGATCA
ACATTTCGCCTTCTTACTGATGGCTTTGATGACATTCATAGCAACGATCA
TTGTTCTCTTTATCAGATATGACGAggaccaaaaagaaaaagtttaaATG
TATTATCAGCCTTACTACAGgagGATTGCGCCATCTGAAGCTGACGAAGA
AGCAAAAGAAGAAGCCTACGTAGAAACAGTGAAAATGATTCTTCAAAGTG
ATaatgaagaagatgaagatgaaaaacatGGCAGGAaaaaaagtctgtct
caaacAATCAAATCTTCCAGATTTTATAAAGTTATTACGGATACAAATTT
TCTCGTATGCGCATCATCTTATTCCCTGTTTGGTTTCACTGCTACTGGCT
TCAATCAACTGTATCCGTTATGGGCTTCAACCATCAAAGTGTATGgtgGT
TTGAATTTCACTACCCAGCAGATTGGcaaaacattgatgtatgcttgcAT
CCCTTTGATCTTTTTCCTTGTCATCATAATATCGAAGctGACACATTGGC
TTGGAATCAAAAAGATGTATCTACTGAATTTGTTCATGTTATCAATTGTT
TTTGCTGCTTTCCCTTTCTTgtccaaaattcaaaatgaGAGTTATCTTTG
GCTATTCATTATATTATCACTGATATTAGTTCGAATATCGGTTGGTTGTT
GTTTTACTGCAGCATGTGTGATAGTTGCAAATTGTGTGGATAGATCAATG
TTGGGTACAGCTTATGGTTTATTTAACGCTGCTTTGAATTTAGCCAGTGC
GTTGGCTCCATCAGCAACTGGTACATCATTTTCATGGTCATTGCTCAACG
TGAAAGGTGTTCCAACAAATCACCATCCACTGGGTTTTCCCTTTGATCAA
CATTTCGCCTTCTTACTGATGGCTTTGATGACATTCATAGCAACGATCAT
TGTTCTCTTTATCAGATATGACGAggaccaaaaagaaaaagtttaaATGT
ATTATCAGCCTTACTACAGgagGATTGCGCCATCTGAAGCTGACGAAGAA
GCAAAAGAAGAAGCCTACGTAGAAACAGTGAAAATGATTCTTCAAAGTGA
TaatgaagaagatgaagatgaaaaacatGGCAGGAaaaaaagtctgtctc
aaacAATCAAATCTTCCAGATTTTATAAAGTTATTACGGATACAAATTTT
CTCGTATGCGCATCATCTTATTCCCTGTTTGGTTTCACTGCTACTGGCTT
CAATCAACTGTATCCGTTATGGGCTTCAACCATCAAAGTGTATGgtgGTT
TGAATTTCACTACCCAGCAGATTGGcaaaacattgatgtatgcttgcATC
CCTTTGATCTTTTTCCTTGTCATCATAATATCGAAGctGACACATTGGCT
TGGAATCAAAAAGATGTATCTACTGAATTTGTTCATGTTATCAATTGTTT
TTGCTGCTTTCCCTTTCTTgtccaaaattcaaaatgaGAGTTATCTTTGG
CTATTCATTATATTATCACTGATATTAGTTCGAATATCGGTTGGTTGTTG
TTTTACTGCAGCATGTGTGATAGTTGCAAATTGTGTGGATAGATCAATGT
TGGGTACAGCTTATGGTTTATTTAACGCTGCTTTGAATTTAGCCAGTGCG
TTGGCTCCATCAGCAACTGGTACATCATTTTCATGGTCATTGCTCAACGT
GAAAGGTGTTCCAACAAATCACCATCCACTGGGTTTTCCCTTTGATCAAC
ATTTCGCCTTCTTACTGATGGCTTTGATGACATTCATAGCAACGATCATT
GTTCTCTTTATCAGATATGACGAggaccaaaaagaaaaagtttaaATGTA
TTATCAGCCTTACTACAGgagGATTGCGCCATCTGAAGCTGACGAAGAAG
CAAAAGAAGAAGCCTACGTAGAAACAGTGAAAATGATTCTTCAAAGTGAT
aatgaagaagatgaagatgaaaaacatGGCAGGAaaaaaagtctgtctca
aacAATCAAATCTTCCAGATTTTATAAAGTTATTACGGATACAAATTTTC
TCGTATGCGCATCATCTTATTCCCTGTTTGGTTTCACTGCTACTGGCTTC
AATCAACTGTATCCGTTATGGGCTTCAACCATCAAAGTGTATGgtgGTTT
GAATTTCACTACCCAGCAGATTGGcaaaacattgatgtatgcttgcATCC
CTTTGATCTTTTTCCTTGTCATCATAATATCGAAGctGACACATTGGCTT
GGAATCAAAAAGATGTATCTACTGAATTTGTTCATGTTATCAATTGTTTT
TGCTGCTTTCCCTTTCTTgtccaaaattcaaaatgaGAGTTATCTTTGGC
TATTCATTATATTATCACTGATATTAGTTCGAATATCGGTTGGTTGTTGT
TTTACTGCAGCATGTGTGATAGTTGCAAATTGTGTGGATAGATCAATGTT
GGGTACAGCTTATGGTTTATTTAACGCTGCTTTGAATTTAGCCAGTGCGT
TGGCTCCATCAGCAACTGGTACATCATTTTCATGGTCATTGCTCAACGTG
AAAGGTGTTCCAACAAATCACCATCCACTGGGTTTTCCCTTTGATCAACA
TTTCGCCTTCTTACTGATGGCTTTGATGACATTCATAGCAACGATCATTG
TTCTCTTTATCAGATATGACGAggaccaaaaagaaaaagtttaaATGTAT
TATCAGCCTTACTACAGgagGATTGCGCCATCTGAAGCTGACGAAGAAGC
AAAAGAAGAAGCCTACGTAGAAACAGTGAAAATGATTCTTCAAAGTGATa
atgaagaagatgaagatgaaaaacatGGCAGGAaaaaaagtctgtctcaa
acAATCAAATCTTCCAGATTTTATAAAGTTATTACGGATACAAATTTTCT
CGTATGCGCATCATCTTATTCCCTGTTTGGTTTCACTGCTACTGGCTTCA
ATCAACTGTATCCGTTATGGGCTTCAACCATCAAAGTGTATGgtgGTTTG
AATTTCACTACCCAGCAGATTGGcaaaacattgatgtatgcttgcATCCC
TTTGATCTTTTTCCTTGTCATCATAATATCGAAGctGACACATTGGCTTG
GAATCAAAAAGATGTATCTACTGAATTTGTTCATGTTATCAATTGTTTTT
GCTGCTTTCCCTTTCTTgtccaaaattcaaaatgaGAGTTATCTTTGGCT
ATTCATTATATTATCACTGATATTAGTTCGAATATCGGTTGGTTGTTGTT
TTACTGCAGCATGTGTGATAGTTGCAAATTGTGTGGATAGATCAATGTTG
GGTACAGCTTATGGTTTATTTAACGCTGCTTTGAATTTAGCCAGTGCGTT
GGCTCCATCAGCAACTGGTACATCATTTTCATGGTCATTGCTCAACGTGA
AAGGTGTTCCAACAAATCACCATCCACTGGGTTTTCCCTTTGATCAACAT
TTCGCCTTCTTACTGATGGCTTTGATGACATTCATAGCAACGATCATTGT
TCTCTTTATCAGATATGACGAggaccaaaaagaaaaagtttaaATGTATT
ATCAGCCTTACTACAGgagGATTGCGCCATCTGAAGCTGACGAAGAAGCA
AAAGAAGAAGCCTACGTAGAAACAGTGAAAATGATTCTTCAAAGTGATaa
tgaagaagatgaagatgaaaaacatGGCAGGAaaaaaagtctgtctcaaa
cAATCAAATCTTCCAGATTTTATAAAGTTATTACGGATACAAATTTTCTC
GTATGCGCATCATCTTATTCCCTGTTTGGTTTCACTGCTACTGGCTTCAA
TCAACTGTATCCGTTATGGGCTTCAACCATCAAAGTGTATGgtgGTTTGA
ATTTCACTACCCAGCAGATTGGcaaaacattgatgtatgcttgcATCCCT
TTGATCTTTTTCCTTGTCATCATAATATCGAAGctGACACATTGGCTTGG
AATCAAAAAGATGTATCTACTGAATTTGTTCATGTTATCAATTGTTTTTG
CTGCTTTCCCTTTCTTgtccaaaattcaaaatgaGAGTTATCTTTGGCTA
TTCATTATATTATCACTGATATTAGTTCGAATATCGGTTGGTTGTTGTTT
TACTGCAGCATGTGTGATAGTTGCAAATTGTGTGGATAGATCAATGTTGG
GTACAGCTTATGGTTTATTTAACGCTGCTTTGAATTTAGCCAGTGCGTTG
GCTCCATCAGCAACTGGTACATCATTTTCATGGTCATTGCTCAACGTGAA
AGGTGTTCCAACAAATCACCATCCACTGGGTTTTCCCTTTGATCAACATT
TCGCCTTCTTACTGATGGCTTTGATGACATTCATAGCAACGATCATTGTT
CTCTTTATCAGATATGACGAggaccaaaaagaaaaagtttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004967XLOC_004967Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008849-exon-sc0000088-1491911889:343458..343752TCONS_00008849-exon-sc0000088-1491911889:343458..343752Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1510915933:343458..343752TCONS_00008849-exon-sc0000088-1510915933:343458..343752Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1575043694:343458..343752TCONS_00008849-exon-sc0000088-1575043694:343458..343752Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1491911889:345911..346078TCONS_00008849-exon-sc0000088-1491911889:345911..346078Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1510915933:345911..346078TCONS_00008849-exon-sc0000088-1510915933:345911..346078Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1575043694:345911..346078TCONS_00008849-exon-sc0000088-1575043694:345911..346078Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1491911889:347208..347314TCONS_00008849-exon-sc0000088-1491911889:347208..347314Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1510915933:347208..347314TCONS_00008849-exon-sc0000088-1510915933:347208..347314Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1575043694:347208..347314TCONS_00008849-exon-sc0000088-1575043694:347208..347314Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1491911889:348561..348652TCONS_00008849-exon-sc0000088-1491911889:348561..348652Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1510915933:348561..348652TCONS_00008849-exon-sc0000088-1510915933:348561..348652Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1575043694:348561..348652TCONS_00008849-exon-sc0000088-1575043694:348561..348652Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1491911889:349184..349210TCONS_00008849-exon-sc0000088-1491911889:349184..349210Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1510915933:349184..349210TCONS_00008849-exon-sc0000088-1510915933:349184..349210Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1575043694:349184..349210TCONS_00008849-exon-sc0000088-1575043694:349184..349210Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1491911889:349404..349477TCONS_00008849-exon-sc0000088-1491911889:349404..349477Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1510915933:349404..349477TCONS_00008849-exon-sc0000088-1510915933:349404..349477Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1575043694:349404..349477TCONS_00008849-exon-sc0000088-1575043694:349404..349477Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1491911889:350497..350655TCONS_00008849-exon-sc0000088-1491911889:350497..350655Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1510915933:350497..350655TCONS_00008849-exon-sc0000088-1510915933:350497..350655Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1575043694:350497..350655TCONS_00008849-exon-sc0000088-1575043694:350497..350655Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1491911889:351970..352521TCONS_00008849-exon-sc0000088-1491911889:351970..352521Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1510915933:351970..352521TCONS_00008849-exon-sc0000088-1510915933:351970..352521Clytia hemisphaericaexon
TCONS_00008849-exon-sc0000088-1575043694:351970..352521TCONS_00008849-exon-sc0000088-1575043694:351970..352521Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008849-proteinTCONS_00008849-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088supercontigsc0000088:343458..352521 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.61242	6.93106	6.8347	4.86527	1.02487	0.601551	2.38793	2.82774	4.30889	3.01924	3.43809	4.95028	7.10707	5.8593	2.97153	2.96581	1.48006	2.83602	8.3673	9.49006	3.07437	2.26057	3.9257	5.03299	2.03493	2.9561	1.35082	0.813943	2.11926	2.61999
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008849 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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