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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008842 ID=TCONS_00008842|Name=TCONS_00008842|organism=Clytia hemisphaerica|type=transcript|length=1569bp
tcaagacATAAATTAATGGATTCGCAATAGCCTTAAGTGACAGAATAAAG
ACACCATATCGGACAGAATCTAATTTGTTTTGCCTTCCTGGCACCAATGT
GTATATGAGTATTAATATGAACGCTGTTAATGTGAATCCAAAAAAAACTG
CTATTAGGATCAGAACATTCTTAACAACACGTATCTCAATGACAGTCAAC
CATTTATTCGCAGTATCTTTTATATTATCTAGTCCTTTGACTTGGTCTTT
TTGTACACCAGGTTGATTTAAGAGCTTTATTCCATTGACTTTTAGCTGTT
GACTATGTCCTTGTTTACCACTCTCGTGACATTCCTCACCGTTTACTTTA
TCTCGAGAGTTCAATTCTTGCAAGGGTAGAACCACTTTCTGTTTATGTCC
TTGTTTACCACTCTCGTGACATTCCTCACCGTTTACTTTAACTAGAGAGT
TCAATTCTTGCAAGGGTAGAACCACTTTCTGTTTATGTCCTTGTTTACCA
CTCTCGTGACATTCCTCACCGTTTACTTTAACTAGAGAGTTCAATTCTTG
CAAGGGTAGAACCACTTTCTGTTTATGTCCTTGTTTACCACTCTCGTGAC
ATTCCTCGCCGTTTACTTTAACTAGAGAGTTCAATTCTTGCAAGGGTAGA
ACCACTTTCTGTCTATGTCCTTGTTTACCACTCTCGTGACATTCCTCACC
GTTTACTTTAACTAGAGAGTTCAATTCTTGCAAGGGTAGAATCACTTTCT
GTCTATGTCCTTGATTACCACTCTCGTGACATTCCTCACCGTTTACTTTA
ACTAGAGAGTTCAATTCTTGCAAGGGTAGAACCACTTTCTGTTTATGTCC
TTGTTTACCACTCTCGTGACATTCCTCACCGTTTACTTTAACTAGAGAGT
TCAATTCTTGCAAGGGTAGAACCACTTTCTGTTGATTCTGAGGAGATAGT
AGCTGTCTTGGCAAAGCTTTCATTCGAGATATCCGCATTTCTCGAACTAT
CAACAAATAAAACAATGGCAGAAGCACCAAAACAAGGCAAAAAGCGACAA
GGTTGATAAACGCAAAATATTGCAGTTTAATAAACAAAATGGAAGGCCCA
GCAATGGAATATATGTACACAGCCATGATCAGAAAAATAATACGATTCTT
TGATAAGATATCCATATGTTTGGATGGCTTGGAGACTTTGGTGTAATTGC
TAACAGCGATTAGCATGATCACTAAGGAGGATGACCAGGTATAAACACCA
TCAACATATATAATGTGTAAAGGTTTTGTTGGTAACACTGGATTCCCCAT
ATAAGTCACTATCTTTAAAGGCAACGCTACCAAACAGAAGAATAGATCTG
AGATGTTCAACGCCAATAGTAATCGTTCTTGATTCCCATAACGCAGAATG
TTTGTCGAGCGATATTTCAATAAGCAATAGAATGTGATTAGATTGATAGC
TCCGCCAAACGCTGACACGGGAATGTTAGCTGCTCCTAGGTAAAAATAAT
CCATACTTCTTTTTTTTCGATTCAATTTACCAAGTTTAAAGTTTAAGCTT
TCTTTTAAGTCCCTTTTCA Run BLAST on NCBI transcript from alignment at sc0000088:240043..242151+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008842 ID=TCONS_00008842|Name=TCONS_00008842|organism=Clytia hemisphaerica|type=transcript|length=2109bp|location=Sequence derived from alignment at sc0000088:240043..242151+ (Clytia hemisphaerica)
tcaagacATAAATTAATGGATTCGCAATAGCCTTAAGTGACAGAATAAAG
ACACCATATCGGACAGAATCTAATTTGTTTTGCCTTCCTGGCACCAATGT
GTATATGAGTATTAATATGAACGCTGTTAATGTGAATCCAAAAAAAACTG
CTATTAGGATCAGAACATTCTTAACAACACGTATCTCAATGACAGTCAAC
CATTTATTCGCAGTATCTTTTATATTATCTAGTCCTTTGACTTGGTCTTT
TTGTACACCAGGTTGATTTAAGAGCTTTATTCCATTGACTTTTAGCTGTT
GACTATGTCCTTGTTTACCACTCTCGTGACATTCCTCACCGTTTACTTTA
TCTCGAGAGTTCAATTCTTGCAAGGGTAGAACCACTTTCTGTTTATGTCC
TTGTTTACCACTCTCGTGACATTCCTCACCGTTTACTTTAACTAGAGAGT
TCAATTCTTGCAAGGGTAGAACCACTTTCTGTTTATGTCCTTGTTTACCA
CTCTCGTGACATTCCTCACCGTTTACTTTAACTAGAGAGTTCAATTCTTG
CAAGGGTAGAACCACTTTCTGTTTATGTCCTTGTTTACCACTCTCGTGAC
ATTCCTCGCCGTTTACTTTAACTAGAGAGTTCAATTCTTGCAAGGGTAGA
ACCACTTTCTGTCTATGTCCTTGTTTACCACTCTCGTGACATTCCTCACC
GTTTACTTCAATTAGAGAGTTCAATTCGTGCAAGGGTAGAACCACTTTCT
GTCTATGTCCTTGATTACCACTCTCGTGACATTCCTCACCGTTTACTTCA
ATTAGAGAGTTCAATTCGTGCAAGGGTAGAACCACTTTCTGTCTATGTCC
TTGTTTACCACTCTCGTGACATTCCTCACCGTTTACTTTAATTAGAGAGT
TCAATTCTTGCAAGGGTAGAACCACTTTCTGTTTATGTCCTTGTTTACCA
CTCTCGTGACATTCCTCACCGTTTACTTTATCTCGAGAGTTCAATTCGTG
CAAGGGTAGAACCACTTTCTGTTTATGTCCTTGTTTACCACTCTCGTGGC
ATTCCTCACCGTTTACTTCAATTAGAGAGTTCAATTCGTGCAAGGGTAGA
ACCACTTTCTGTCTATGTCCTTGATTACCACTCTCGTGACATTCCTCACC
GTTTACTTTAATTAGAGAGTTCAATTCTTGCAAGGGTAGAACCACTTTCT
GTTTATGTCCTTGTTTACCACTCTCGTGACATTCCTCACCGTTTACTTTA
ACTAGAGAGTTCAATTCTTGCAAGGGTAGAATCACTTTCTGTCTATGTCC
TTGATTACCACTCTCGTGACATTCCTCACCGTTTACTTTAACTAGAGAGT
TCAATTCTTGCAAGGGTAGAACCACTTTCTGTTTATGTCCTTGTTTACCA
CTCTCGTGACATTCCTCACCGTTTACTTTAACTAGAGAGTTCAATTCTTG
CAAGGGTAGAACCACTTTCTGTTGATTCTGAGGAGATAGTAGCTGTCTTG
GCAAAGCTTTCATTCGAGATATCCGCATTTCTCGAACTATCAACAAATAA
AACAATGGCAGAAGCACCAAAACAAGGCAAAAAGCGACAAGGTTGATAAA
CGCAAAATATTGCAGTTTAATAAACAAAATGGAAGGCCCAGCAATGGAAT
ATATGTACACAGCCATGATCAGAAAAATAATACGATTCTTTGATAAGATA
TCCATATGTTTGGATGGCTTGGAGACTTTGGTGTAATTGCTAACAGCGAT
TAGCATGATCACTAAGGAGGATGACCAGGTATAAACACCATCAACATATA
TAATGTGTAAAGGTTTTGTTGGTAACACTGGATTCCCCATATAAGTCACT
ATCTTTAAAGGCAACGCTACCAAACAGAAGAATAGATCTGAGATGTTCAA
CGCCAATAGTAATCGTTCTTGATTCCCATAACGCAGAATGTTTGTCGAGC
GATATTTCAATAAGCAATAGAATGTGATTAGATTGATAGCTCCGCCAAAC
GCTGACACGGGAATGTTAGCTGCTCCTAGGTAAAAATAATCCATACTTCT
TTTTTTTCGATTCAATTTACCAAGTTTAAAGTTTAAGCTTTCTTTTAAGT
CCCTTTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008842-exon-sc0000088-1491911889:240043..240732 | TCONS_00008842-exon-sc0000088-1491911889:240043..240732 | Clytia hemisphaerica | exon |
| TCONS_00008842-exon-sc0000088-1510915933:240043..240732 | TCONS_00008842-exon-sc0000088-1510915933:240043..240732 | Clytia hemisphaerica | exon |
| TCONS_00008842-exon-sc0000088-1575043694:240043..240732 | TCONS_00008842-exon-sc0000088-1575043694:240043..240732 | Clytia hemisphaerica | exon |
| TCONS_00008842-exon-sc0000088-1491911889:241273..242151 | TCONS_00008842-exon-sc0000088-1491911889:241273..242151 | Clytia hemisphaerica | exon |
| TCONS_00008842-exon-sc0000088-1510915933:241273..242151 | TCONS_00008842-exon-sc0000088-1510915933:241273..242151 | Clytia hemisphaerica | exon |
| TCONS_00008842-exon-sc0000088-1575043694:241273..242151 | TCONS_00008842-exon-sc0000088-1575043694:241273..242151 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088 | supercontig | sc0000088:240043..242151 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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