TCONS_00008833 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008833
Unique NameTCONS_00008833
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length785

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008833 ID=TCONS_00008833|Name=TCONS_00008833|organism=Clytia hemisphaerica|type=transcript|length=785bp
CACTTTTTTATTGCAACATTTAACCTGGTTAAGATGTTTGGTGGAGGACA
CAAGAAATTTCGAGTCAAAGTGACGACAGGAAAAGCTAAAGGAGCAGGGA
CCAACGCTACCATCAACATCAAATTGATTGATCACGAAGGAAATGTATCT
GAATCTCATGTTCTTGATAAATGGCTTCACAATGACTTTGAATATGGAAA
GATTGACTCTTACACTATCTATGTTGAAAAAACCTTTGgTCGATGCGAAC
ACATCATCTTGCATAGAGACGAGATTGGTTTGAATGACAGCTGGTACGTT
GAACACGTGACTGTTGAACATGAAACCGAGGCTGATGCTCATTTTCCATT
ATCGCGATGGCTACCAGCAAACACAGAAATGCAATTCAAGAAATTTGACT
CACAACTTCCACAAGTcgtgaaaaaagaacatccagAAGTTTACCAACAA
CGTCAGAATGAGTTGgatcaaaagaaaaaggacTTTGCTTATGCACCTAT
TGCTAATAAAGAAAGAATGCCTAGAACAGTAACTTCATTGCCACCTGAAG
AGACTTTCCATCGTAATTATATCTTCGACCTTTTGGAAACGAAATTTACT
GGAGTAATCTCACAATATTTGAAGAAGATGAGATATGAAGATGAGTTTGC
ATCTTTCGATGACATGTACAAAGTCTATTATGGACCACTTTCACCTTTCA
CTGTCCCAGCTGGTCATTCTGGATGGAGAACAGATGAGAAATTTGCACGA
TTGAGATTGACCGGACCTAATTGCACTGTCATTCG
Run BLAST on NCBI

transcript from alignment at sc0000088:163342..182100+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008833 ID=TCONS_00008833|Name=TCONS_00008833|organism=Clytia hemisphaerica|type=transcript|length=18759bp|location=Sequence derived from alignment at sc0000088:163342..182100+ (Clytia hemisphaerica)
CACTTTTTTATTGCAACATTTAACCTGGTTAAGATGTTTGGTGGAGGACA
CAAGAAATTTCGAGTCAAAGTGACGACAGGAAAAGCTAAAGGAGCAGGGA
CCAACGCTACCATCAACATCAAATTGATTGATCACGAAGGAAATGTATCT
GAATCTCATGTTCTTGATAAATGGCTTCACAATGACTTTGAATATGGAAA
GATTGACTCTTACACTATCTATGTTGAAAAAACCTTTGGTaagtaaaact
tgaaaaattatttttggtagATTAAAtaaattccatgattttttttagGA
GTACAAATTTTGGAGAGGTCGGAAAATCACGAAATTTACGACGTtcactt
tcgcgaatttgaggataacatatattttataaactttcgcaaatcgatgg
ataaaaatgagaagtTTCAAACGAAAAAGTGAGAATGTACCTCGAACCCA
TTAAAAACGGTTGTTCTTTGAATTATAAAGATTTACTGAAGATTTTACAT
TTTCGAAGTTTTATAGATTTTCGattcttttgaataactttcgcgagcat
aaactttcgtgaATTATCCAgctaagaattttcaaaaacattaactttcg
cgaaaaaagccaaaattcgcgaaaattgcgaaagtttctgcttggaAAGT
TTAAACGCCTAAAGTGTTTTACCAAGCCCACCATTTTAAGTTATGTATTA
AACATTTCGGAAAGGTCAGAGGATTTTGGAATGTTTGGATTGCGGATTTC
CGACTGACTACGCTATTGGATTTGCGACAGAGGTCCAGTCCTCGTTTATG
ATCAAGAGCAGTCAATCTGATAAATGTTTTGGGCTTTTTTGTGATGTATC
AGTCCCCAATCTTTAAGCGCTCTGACGTGATCAAACTTTCACGAAAAAGC
GATTGGAAGCGATTCAGGCTACTTTGCATAGACCTTTTGTAGGATGTgag
acatgttttttttataagcaatagTGTATGAAACATGGTTAAGATGCTTC
CATAAGCGTGTATCGATTGttgcgaggggtaaatcacttgaaaaaaggtg
tacgacactttttgactttttgaattttcattgactttttgacttttttt
tgactttttttccgACAAAAACGCCCACCGTCTTCGGGCGCCCAACATTT
TCCAAAAACGCCAAACGCCTataaattttgctccacccattcgcccattc
aagaaactttttgacctattcaagacttttttttgactttttgacttttt
tctaagaattttagactttttcttcgactttttgactttttgactatttt
ttgactttccgtagaggtgtacgataatttttcgagtgatttacttttga
aaaaaaaaacattcgtggaactaattttttgtttttttctataaggTCGA
TGCGAACACATCATCTTGCATAGAGACGAGATTGGTTTGAATGACAGCTG
GTACGTTGAACACGTGACTGTTGAACATGAAACCGAGGCTGATGCTCATT
TTCCATTATCGCGATGGCTACCAGCAAACACAGAAATGCAATTCAAGAAA
TTTGACTCACAACTTCCACAAGTcgtgaaaaaagaacatccagAAGTTTA
CCAACAACGTCAGAATGAGTTGgatcaaaagaaaaaggacTTTGCTTATG
CACCTATTGCTAATAAAGAAAGAATGCCTAGAACAGTGAGCATTTATTAt
tcgaaaattgaatattgctGTTTAATGTGCCCGAAAAAATGTTATAATAA
TTCaacaacacccctgtgtcacagatctCCTCCTCATTTGAAAATGTGTC
CacaatttcgtccccggtggaaaaaatacacCACAATTGACTGTGATTTC
ATTCCCACTTGATATTCAATGGAAAAATTACACTAAAAACTATAACAACT
ggaattttttgagtttgggACAATAGGATTTCTTTTCCTATTGGGATTTC
ATCGATAGCAACTTTCAAAAAGCTCCAGCGGGGCTATGAGACAATGAGAC
ATGAGTGTAATTCATCTCTCGTAAAAAGCAAGGATCCGATAacaacaccc
cttctcacagacccggtgggaatATCTGGCAGGGGGGGGATTCGTATTCC
CATGGTTTTATGGCTCGAGatttcattccattgttttcagcccataaaat
tcagtggggatggaaaaatagcacgatattttacagtgaggattgcgcat
atttgattattttcatcgAAGACAAAAGTTGGAGTATAATGTTCCACTGG
Agacgatatttttgccaatttttccagtgggaaggggtaccagtgggtct
gtgagaagggggtgtataagaATCTAATTTACATGCATGAATATTCATGA
TTTACTAACTCTATTTCTTTCCACAAAACCCTCTTCAACTTTAAACTTAT
TTTATACACTTTTAGGTAACTTCATTGCCACCTGAAGAGACTTTCCATCG
TAATTATATCGTAAGATATCACTTCGTTTTTCTTACTTGTACTTTTTATT
TAGGCCTGAGATTTCCAAATAGTTTGAGTGTCTACTCCCCATTCAGAATC
TATACAAAGTTAGGTAGAGATATTTTGCTTGATGCAAAAACAACTCCCCN
TTATCGCTTTGTTTttcctactctcgggtacctaatagccggggggtttg
gaataagcgggagggggggttggaataaaaatgtcctgggtggaaaactt
ttgaaaaggaggctaatacagcagaattaggacaaaagagggaactttca
aaaacattttcccaaaaatcaataagcaggggggttggaataaaaatgtc
ctggggggaaaacttttgaaaaggaggctaatacagcagaattaggacaa
aagagggaactttcaaaaccattttcccaaaaatcaataagcaggggggt
tggaataaaaatgtcctgggtggaaaattttcgaaaaattaattagcggg
gggggggacggctattaggtacccgagagtacttgtACTTTAGGCCTGAG
ATTTTAAGTAGTTTTGAGTGTCTACTCCCCATTCAGAATCTATACAAAGT
TAGGTTAGAGATATTTTGCTTGAAGCAAACAACTCCCGTAAGAAATTAAA
ATGACTTTTCATTCATTCATGTATGGGCGGAAAGAGAAAAATGTAACTTT
AGCTtacacatattttttataagagcatccaaaactttttaaaccCTCGG
ATtttattaactttttgagatctaagcctaaaaatgttctcaacatatTC
TTGTTTTCGctatttttagagtatttttgtATCCATTTTGCtaaagaaat
cgggtgttttagagtccgcaaagcgtTGAGAcgctcttaacatgttctta
acatttggtcattgaagcctcatgttcttatatagtttctcATATAACTT
GTATTGTTTCCTATAGTTCGACCTTTTGGAAACGAAATTTACTGGAGTAA
TCTCACAATATTTGAAGAAGATGAGATATGAAGATGAGTTTGCATCTTTC
GATGACATGTACAAAGTCTATTATGGACCACTTTCACCTTTCACTGTCCC
AGCTGTAAGTTCTTGCATCGATCCATTCTTTATTTGTATTTATTAGACCA
GCTAAGATCTCACCTTACCATCATCCAAGATTCTTAGACGGTCTTTTTAT
GTAAGATCTTGCAATTTCTTGCAAGACCGGGGGGGGGGGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGGACCACTTTCACCTTTCACTGTCCCAGCAGTAAGTTCTT
GCATCGATCCATTCTTTATTTGTAGTTATTAGACCAGCTAAGATCTCACC
TTACCATCATCCAAGATTCTTAGACGGTCTTTTTATGTAAGATCTTGCAA
TTTCTTGCAAGAGCCTACGCGAATTTAATATTTTTGCACGACCAAAAGTT
ACAGTCCTCCAAAATAGGCTGAAAAAGACCGGGAAAAAAATGGGATAATT
ATTGTTTGTTAATAAGTCTCTTCTCGAAAATCAATACGCTTATTTCTCTT
CAAGGGTCATTCTGGATGGAGAACAGATGAGAAATTTGCACGATTGAGAT
TGACTGGACCTAATTGCACTGTCATCCGTGGTGTCAAGAAAGATGGCGGT
CTACCTACAAAGTAagcttcaatttttaaaagtatttgtCTATTTTTGAA
ACAGTGCAGGTCACACAATTTATACATGAAATCACCGACTTCCAATCAAA
TTAAATCATGAAATTCCATCCTACCCTTCGAATAGACTATCACTGGCTAT
GGTCAGGTTTATTAGTGGGGAGCTTTCATAACCTCTGCGACAGTTTTccc
tagcctagttaactaagcccgtattcacaaggctagttaggacacacggc
ttttggcaatatagcgttttcggcgctttaaagattttttatatttacgg
actTTAAGTTTGCCTTGCAATACTatttcagtcacaacttaccattaTAT
TTATTctggtgactgaatcaaactagcttagaatTCTAGATTTCTAGGCA
AAATTTTCCCATCAATTATAaacagatgaaaaaaaaatcataacttttTA
TTATCTAGCTTTCCAGTGGATAAGGACAATCTGGCAAAGCATTTCATGGA
GGGACAATCATTCCAACAAGCTCAAGACGCAGACCGTTTATTTTACATCG
ATTTCAAAGATTTGGATGGTTACATTGCAAAGTCTTCAGGAAAACCCATG
GTTGCTCCTCTTGCGCTATTTTACGCGAGAATGGATGGCACTCTTATTCC
TTTGGCTATTCAACTCTTCCAAAAAAATGCTGATAGCAATCCcgtaagat
ttcttttgttatcgcttgcgtttttaaaaatcttttcaaaaggGACATAT
GTGAATATGTCACGTGTCTTAAAACCGAACAGttttaaattacaaaaatc
agAATATATTTGGTCAGTGCCATAGAAATTCTATCATCTTTTgtaaaaag
acaaagaaaagctatcaaaagtttgaaaatttttatagcACTAATTTGCT
TTGCAAGTAgagaaattttttgtttgacCACATGTCTTTGTCCACCTTGT
ATAAAAAACAATCGGAATGTTTTTACATGTGACATGTATGCTCTTTGCAT
ACAGTTTGTTGTCACATTTCGTAATTAGTTTTAAAGGTGCTCGATTCATG
CAATATGTCTCGAGTGTACTAAATTTTGTATTATTCATTGTGAACAGATC
TTCTACCCTCCACCAATCGATGACGAGAAAGTGTGGTGTCACGCCAAATT
TTGGTTCGGTGTCGCTGACTCCAACTACCATGAACCAGTCACACATTTGT
TGCAAACACATTTAGTAGCTGGAGATTTCATCACTTGTTTTCATCACATG
ATTTCACCCTCTCACCCTGTTTACAAATTGATGTTACCTCATTTTATATA
CCTTCTTAACATCAACACGTATGTTATAGTTTCTTCTATTAGCTCTATAT
GCAGTGATCAACTCTTAACTACGCGGTCGACCTCAGAGGGGGCNCTACCT
CATTTTATCTACCTTCTTAACATCAACACGTATGTTATGGTTTCTTCTAT
TAGCTCTCTATGCAGTGATCAACTCTTAACTACGCGGTCGACCTCAGAGG
GGGCTGGTAATGGATTATTAATCGTTATTTTTGGCAGCCTctaaaacaaa
tcaaacaaactcCTGCCGAAACTATTCCATACTAGGAAAGACATTTCCTG
AATCTCTGCGGTGGAGCATTTTAACGTTTGAATAGCTTAACTCTTTAATG
ACGTTATTTATCGCTTCAATGCAAGGGTATCTTACAATTTTCCTATTTTC
GTTATCAGTTTCCTTAAAAGCTTGTAATCATTCCATCTTTCCTCTTTTAG
AGATGGTATGCCAGTTTTGACCGCTGAGGATGGCGCTTTCAACAAAATCC
TGACCTTCGGACTTGATAATTGTTATGATCTCATGTACAAAaagtaagaa
tttttttttaacattctaTTTGTAGAAAAAGATAAGATTCATTTCTCAAT
TTAACGATATCAAAAAATTAAGGGGCTACAGCTCCATAAAAACGAGGTCA
TGCAAAGTCTAGACTGGATTGGGAACCATAGCTTGTAACCATTGAACCTA
AGCCCAAAGTGCTAGAGAGGAACTCCTGGAtggaaaatgaagccacttat
ttcccatcctgaACGCGTGACCCGCGGGGTCTAGATTGAAGGTAAAGCAT
atcgccagatttcgaaaaatatatcgcgtgaaaacaaagaaagtgctaga
ttcaatccatcatTCTGAATGTGGtgcaaatcttaaggcttcacttgtTC
TTGCTTGAGCAGGGTTAAAGATTCACCTCTAGCTCCTTCGGGGCTTTTAT
CTCAATGCTTAAAACCCACtaatataaattattttatctTCATGACAGAT
ACCAAACATTCAAGTTGAGCGATGCATACTTGGCCACTGATTTATCGAAC
AGAGGAGTTGAAAACCTTCCCAACTATCATTACATGGAAGATGCAAAGCC
CATGTTTAAAGCCATCGAAGATTATATCACTGCCTCTCTCAAAACTATTT
ATGGTTAGTATAAACCCTAAAAACTCTTATTCGGTGAAAGGGTAACTCAA
GCTCGGCAAGGTTTTCAAATGATCAGAAATTGTCCTTGAGTGGGGTGATA
CAGGCTAGTTAGTATACAACTTCAATATTTTAATGTTTGACTGGAAGCTA
AACTCTAAAACTGTCACTTCTCAGGGTACCTTAGGCACTCCCGAATGGTC
GCATGACGCTTGCACCTTAACctgaatgtttttatgttttttcgaAGTAT
TCgatatagaaaataaaatggggcatggtcagatggtcccacttgttgaa
aattcgaaaaattttgaaaacctaatttttcagcaaattttcatgatttt
gatgacgtcacagaaataagaatttgaataaCTTCTATTAGGAGAAAAGc
ttttgacttcaaattttcaccaaaggtgtaaatcaataaaaaaaggatcc
acgaaaaaaaattaaaaattctttgctaatgtcaataaaatttgcaaaaa
caccgttttggctgaaattgCTAGTCCTTTAGCTAGGgcctttttttgaa
attcaaatatatGACAATACAGCTATAAAACTCTAAGGATTTTAAAATCG
AgttattgattttttgattcTCGTTCGATTCTTAGGAGGAAAAGACCAAG
TCCTAAAAGATGATTTCGAAATGCAGAATTTCGCAAAATTGTTATGTGAC
AAAACGGAAGGAATGAGAGGAGTATGGGGTGATGGCACATTCACCAAATT
GGACGATTTATCCAAAACTCTTTCAACGATGGTTTTCATTTTGAGTAATG
TTCATGCAGCAGCCAATTTCAATCAATATGATGAATATGGCTACCCGCCC
AACCTCCCCTTCCGCCTTGATGGCGCACCACCAATTGATAAGGTAATGTT
AACCATATCTGCGAAATTAAGGATGATAATATGCTGAAAATTTTAcattt
attacgatttcgaggttaagtagatttccaatttttttgagaacTTTTCG
CGAGTGTAAacttcaaagacatttactatcgcaaaaatggccgaaattcg
cgaaaatcgtgtAAGTTTTTCTGAACATgactcaaaaaatgtcaaatact
ttttgaatgaccTTTCTGAGAGTGACTACATTAATCTGTAGATATCGCAG
CCGATATCTACAGAAATTTCAAAACTCATTGTCGTAGGGCCAATGTACTA
CGCTATTTTTTACGTGGAACATCGTGGAACATCGTGGAATATCTGACACA
TAGTACGAAATGACTTATAAATTAGTACCTCTTCTACCAACTGTAGTCCC
TGCGTTGCTACTCGCTATTTCCTAGCTGGTGCTTTCTATGTTATATTATT
TCTTATACCTAGTTTTAGTCTAATTCTCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTCACCAAAT
TGGACGATTTATCCAAAACCCTTTCAACGATGGTTTTCATTTTGAGTAAT
GTTCATGCAGCAGCCAATTTCAATCAATATGATGAATATGGCTATCCGCC
CAACCTCCCCTTTCGCCTTGATGGCGCACCACCAACTGATAAGGTAATGT
TAaccatattttttatttgtcatCTGCGAAATTAAGGATGATAATATGCC
GAAAATTTTAcatttattacgatttcgaggtcaaatagatttccaatttt
tttgagaatttttcgtgagtttaaactttcgcgaattaccatgttaagaa
ttttcaaagacatttactatCGCAAATATggccgaaattcgcgaaaatcg
tgaGTTTTTCAGAACAAGACTCAAAAAATgtgaaatactttttgaatgac
cTTTCTGAGAGTGACTCCATTAATCTGTAGATATCGGATGCGATATCTAC
AGAAATTTCAAAACTCATTGTCGTAGGGCCAATGTACTACGCTATTTTTT
ACGTGGAACATCGTGGAATATCTGACACATAGTACGAAATGACtttccct
tttttctttttagtctCCAGTGACAGAAGACtatttggtcaaattatttg
acgtcaatgtTACCTTGGCAACAATGGATTTGGGAAGAACTTTGAGTATG
CAAGGAACAAACAAAATTGGCAATTATGAAACTCGTTATGAATACAAACC
TGACGTTTTAAAACATTATCTCAGGTTAGTTTTTATTCTGTACGGACAAC
TTTCGCATTTCAGTTAAGTTCCGTCTTTCAAATTTTAAGCAAGTTCAGCT
TTTTTCAGCGATGTTGTCGGCTATTTCGGAAATATTATCGGTACCTTCTG
ATGAAATTTCCACGTAATACAGTATATCCAAAAAAACGGAACATAATTCA
AATGGTACCTAACATGTTTGTGCGGAACAATGTGTCAGAACTTCATGCTG
GAGGCTTTATTTTCTGTACTAAAGTTTGACACGACTCCCCCAATAGAAAG
TATTCAAACATTTAAgtctaattttgtttttaaacagTTTCATCGAGGCA
TTGAAGAAGGTTGGAGCTGACAACGACTCAAAGAACGCTAAACGAAGTAA
TCCCTACCCATGGCTCTCACCAAAGGTCGTTCCTAACTCCATCagtattt
agaaaatttattttttaagtgaaacattttgaaactttgcaatAGGCCAA
GCCCGCAAACTTTTACATATGGAATGCGGAACAAAATATAGACACTTTCG
GTACACACATTGGATGGCATAAATTAAGAGCTAATTAGAGCGAACAATCG
TTAGACATTAGAAGAAACTTAAAGGATCTAtccaaaaaatgtcttttttc
aactttaaaacgagcatttcaaattttcaatacaTAAGCCTCTATACATC
ACCTCAAAAGTTAATCAAgacttattttttttataagcacatgtTGTTAT
AAAAGTATTTATATAATGAAAAATCGAAATACAGTAATAATTAATattaa
taacttttgaaataccaTGGTAAGTTTGGTTATTCTTATGGCTTATGGTA
CCCTACAAAACCTACTTTTtatattcatatttttttgcctttttttattC
GGCGACGTTGAGGTTAACAATGGGCCGGAAAAGGAGACCACGCTACGTGT
TTGTCACTGGAATCTGAGTAGTGTTTGGGTTGAATATTGGGCTATaaaaa
atttgctctgtccgggggtcaatcttgctctgtttgggggtaattttgct
cggTTTGAGTTTTATTTTGAATGTCTGGGGGTCAACTCATGCTTGTCCAG
GGAGtcagacctgctgtccgggtgGGTTAATTTCTAACAAATGTTTATAT
CCTCCACCTCCTcctatattcattttttttatggtAAAGGTATGCATTTT
TGAACATTTACTAATTTGACATTGTTTGTTTtggtgaaatttttttgaat
gctGAGATAAAAATAAAGGATGACGATCTTAGGCTGGCTATTGAAAACTT
AGACTATGccatagtctaagacgagtttcatctagtTCTCGAGGTGAAAC
CACATTCACTATATTAAGCGAATGTCTTGTAGCTGAGATGAAAACTGGTT
TTTTTGTTCTCTTTGTAATCGATCCCTTAGTCAGACTTCTGATGAGTTCT
ATGTTTTCTCTCATAAATTGAAGGAGATCGTTATAAACGTCACTGATCCT
GGTGGTAAAAGTATTCAAAACCTAGCTAcccaacatttttttttttaatt
gttcaaGCATTTTCTGAACGTAATATACTAGAGAAATTAGATACAAGTtg
gtattgaaaaatataaaatatactatATACCGCGCAGCCTGTCCCGGCAT
GGATCTTTtggatttaaataaaattctaaaaataaaaagggaGTCGTACT
ATACCTCTCGACCCACGGATGCATCTCACTGTAGATCTAACGAGCGAGAA
GCATATGATAGTTCTAATGCTGTTAGTAACTTTTGAGAAAGTTTCATGTC
TTTTGTCTGCTATCATTTCAGCTACACGTTTGCAAAATAACGTACATTCA
CTTCCCATCGCCCCATTTGTCGCAAAAACGAGCGGTGAAAAAGTCCCATT
TCCGGCTTGCAAAATGCGTTCGCCAtattgtctcttcttttcgcgTTCAT
TGGATAATAAgcatttctcaatttttgaattgATGTACCTTCGAGGAAAC
GGGTTGAAAACCctcacatcaaaaaatgctcTTTACCCAGCAGTCCAAAA
ACTGAGAGCGCTTATATCCAGTCTCGCCTCGCGTGAGACATTTTCATGTC
TTGGTAGATCTTCGTTATTAAGTTCGTTTAATAGGGGTACAGTTCTTACA
TCTACGCATCATCTAGCAGTTTTGACGTAAAGTCTCTAATTTCATTGTGT
CTCAGAGGCATGAATCCTCCCTTCTTGCACGAGAGCGCGTGTGCTAGATC
GAACGATGATCCGCACGCGCAAGTTGATGGGAGTCGGTCGAGAGGCTAGT
TGTAACGTATTCTGATGGTATCCCAAAACTCTTGCTTGGTCAGCTCGAAA
CCTCATTCCTTTAAAGGGATGGATGTCAGCCAATTTGAAACACCTTTTTG
ATTGAGTGTCTCCATCGTTTGTTTGGTGTTGATGTCGGCTGTCTCCAAGC
TTTTCCCGGTGACGTTGCTGCCGTTTTTTGTGAAGACGAGACTTGGATTT
CGCTTCGGGTGCACCATCATTCATTTGAAGGATTTGATTCTGAAGGTTAC
ACTCATCGAGTCTCTGTGATCGTGGCTCGATTCGTCGGAGTAGATTTTCA
GTCCCATTCCACCGAGACGTGGAAGTAAGGAAAGCATTATTCTTTCCTGG
TCGTTGATGATGCGTCCACTGGTTAGTGATGGAATCAGTCGGTGCCGCAC
AGCTTTATCGACTCTTTTCAACTCGTCATTGATCGTTGGGATGGTGCGTA
AGTCAACTTATGTTGGTAGCTGCTGACGTAGGCTGAGTAGGCTGCTTGTA
GATGGGTTGCTGCGATTTCAGCAAGAAGATTAATCTCCTGGGTCTACTGA
CTTTTGTTTTCATCCGTACTAATCACCACCCCGAGGTGCCGTTCACCAGC
GGATGTTATTTTGATCTCGGTGCGAGCAAACTTTTCATGTGCTTGTTGAT
TTGGTCGGGTTTAACAATCAGCTAAGATTTTGTTGGTTGTGGATAATAAC
CTTAGGATGGTCCGATCTCGAGGAGATGATCCCAACATTTGTTCAGTGCG
TCCAAGGACTGCTGTGATATCGTCGGCGAAGGCAACCATTCGGTTGTGGT
TATTGCCTATACCAATGAGGAGGATGTTAAGCATCGGTGTAACACCCAGA
GCGTAGATAGCCATACCGAGTGGATCTCCTTGAGTGGTTCCTTCTTGGGA
TTTAATTTCTAGACCTCCAACGACGAAAAGTCTAGCTGGACTGGAGTAGC
AGCTCGTTGCGATTTCGGGACAGATATACTTGATATTGTGGATCAAGGCT
TCTCGATTGATGTCGTTGAAGGTGTTGGCTGCGTCGACAAGGATGACAGC
GTCTTTTCTTTCGTTGGTATACATCCGTCTCATGGCATGGATTGCACCCT
CGCTCCCGGAACTTCGTCCACACATTTGCGCGTCAGATGAACCACGTACA
CGTACAACGTCTTCAGAGAATGCAGCCATCACAACTTTCCCCATGATTCG
TCTGAGGACTTCCCCAACACCTATCGGTTTAAGTCCAGGGTTCTTGTTGA
GAGGTACAAGATGTGAAGCAAAAAGTGGTGCTAACGATGAATCCTTCACA
TCGATGGAGCATATCTTTCTGATGAGCGCAGCAACTGATTTTTGGAGGTC
TTTACCCCTCGGATAACTTAATTCAtttcccagaattgcattaatttttt
tcGCCCCAGTTCCATAAACCATAAAAAACTATACTATACATTTTTTGGAA
GCATATTTGGATGATTtggtattcggtgtaacttaatttttttctcagca
gaatttgagttttttttaagaaaacgtgattatgacgtcaaGTTGAATAT
CTCATGAACTAATACTctaaaactttataaaatttggaccaaaatcaTTT
CACACTTAGAGCGAGTGGAGCGAGTTTCTTTATTTGGAGTTTGGACACTT
TTACACACCCACCTCACCCTTCCTAGCAGCGAGCGGCACCAAGCTATGAA
TGAACTTTTGATTGAGTTTGaacaacttgattttttttaatacaaattat
taagaacaagataagaacattttaaggcttataaCACAAAAGGTTATgaa
tatccaaaggcttcaaagattttggatgttcttgtaaaaaagaacgtgta
ttgggctcttccagaaaaaaattgtacatggggggtggaggatataacaa
tttttagtgatttaccccccgaacagggtgacttttggccctagaacaat
aggttttaccccccggacaagcatctgctgaccccccggacaccccaaat
tacccccggacagagcaaatttaccccccggacaaggcaaattttgNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNacttttttaacttttttttttttacttt
tatttgactttttgactatttttgactttttgacttttattttaactttt
tttccgaaaaaacgCCCACCAACCTCGGGCATCCAAAATTTCCACCCAAA
TAGTTTTAATAACGCCCACCACCCATATTTCTCCGTCAATCTgagatttt
ttgactttttacagacttttttttactctttattgactttttgacttttt
ttatcgactttttgactttttttgactttttttgactttttgactttttt
tgattcATTGATTTCCATAAATACTCTTACACAAATTTCTTAGGGAATTG
CAAAAAAAGtaatcacaaaatggtaaaaccattaagagcatgttaagtac
atttcaaggcttaaatatcaaaatgttaagaacatccaaagactagaaaa
attttggatgttcttattaaaaaaacgtgtacttgcgTTGTTATCGTGAA
AGATTTTTATCTCCAGTAATAATGCAAATACGATTTTACCAAACAATCAG
AAATATTTGTGAGAGTCTTAGGAACAAAGCTAATAATGTTATATTTTAAA
CTATTGTTTATACAGTTCACTAAGCAGCAACAAAAGGATATTTGAGGACG
TGTCACTAAGAGCATTCTGGAATAAGGAGGGTTGTAAAATACAGTGCTAG
CATCAGTTGGGTTGAACTTTCACCGAGGATAGAAGACAAGAAGGATTCTG
ACTTCTAAAAACCAAGTCGAGATGTTTGGTGGAGGACACAAGAAATTTCG
AGTCAAAGTGACGACAGGAAAAGCTAAAGGAGCAGGCACCAACGCTACCA
TCAACATCAAATTGATTGATCACGAAGGAAATGTATCTGATTCTCATGTT
CTCGATAAATGGCTTCACAATGACTTTGAATATGGAAAAATTGATTCTTA
CACCATCTATGTTGATGAAAGCTTCGGTCAGTATTTTTTGTATTCGACAA
TTTATGTCTAAGGTCTAAATCAACGAAGGGGCTAGAGTAGAAACTTTTGG
AGGGGAATGAAGCTATTTAATTTCCCacccagaacgcccgcgcgtggttt
ttacacataCGCCGGAtttaaagtaaaatctatcgctagatttcaaataC
TGCAgttctcaaaaacaaaggaacctctagatacaatccgtcgtcaagat
tgcggcgcgttctggatgggaaataagtggcttcactttttcttgcatgA
GAATTGTTAGAGATTTTActatagcccttcgggctttaaactcaatgata
ttttaatttcaatcagtgataaagaaactttttaattttctttgaagAAT
TTCTCTAAGATTTCAGTATCATTCTTATAGAAATGGTAATTATGAGCTCT
TTAAGTGAGACATTCCCTAGCAACCTTAATTCgatttgataaatattttt
catacttCACACTTTATAGAAGCacaaaatttaattaatttttttcataa
atatgTAAGTAATCTGTAAAAGTCTAAAACGGGTAAAATTGACCCACCCC
CTTAAGAGAacagtagcgagtttatgtatttgctctcttgaggacggtag
agtgactgaagcgatttggaaaaacccgcacttctgacccgcaaagtcga
ggacggtaaaagtactgatttaccgtcgtattaatgaaatctagttcaaa
atcgaactttcaatAAACTGGCAAACTGGTAAactctggcaaataggtcg
agatCTCTTTTGTCGGCAAATGCCGACaccggcaaagaaatcgaaaatac
tcttgtcggcatatgccgacagtGGCACGGAAAGGGAATAATAGTTTAAA
GCCAAGTTTGTTCAAGATTATCTGAATTCATATAAGAAGCGTTCATGATT
ACAGTAATTTTCAGTTATTTCTTAATTTTAAATGCGCGTACACGCCCCAA
CTATGAAAAAATGCCTATTTCGACCCGACGTTTTTATTCAGTCGGGGCAA
AAAATCACGGTTACACATACAAAAAAATGGCCAGTGCCACTTAATTAGTT
ACTGGACCCAGCTAAGGGGCCGGAAAAAACGTCCTTGTAACAAAGCAAcg
ttttgtatttttatttatatGATATCTTATAGGTCAATGCGAACACATCA
TCTTGCACAGAGACGAGATTGGTCTGAATGACAGCTGGTATGTTGAACAC
GTGACTGTTGAACATGAAACCGAGGCTGATGCTCATTTTCCATTGTCGCG
ATGGCTACCGGCAAACACAGAAATGCAATTCAAGAAATTTGATTCGCAAC
TTCCACAAGTCGTGAAAAAAGAGAATCCGGAAGTCTATGACCAACGCCAA
GCGGAACTTGATCAAAAGAAAGTCGATTTTGCTTATGGCCCTGTGGCTGG
AATAACTGGAATGCCTAGAACGGTATAGACAAGTTAGAGGAAATTTAAAA
tgagggggggggtggaggatatagtgtccggggaatagtgaaaaatctac
aaatttgCACGCAAACAAATTAcacgtttatttataagaacaaaccattt
AAGAGCaaaaggctttgatggccaaaatattaagaacaaattaagaatat
ttttaggttcTGCTTACTCTGGAAAAACCGATCTCTTTAGGAAAATGGac
taaaatactcacaaaatggtgaaaatgagaacatttttgaggcgtaaaac
tcaaaaagttaagaacgcccgaaggcttcaaaaattatgaatgTTTTATA
AAGAACGCGTAGTCAACTTAAGCAAACGAATTATCTGGACTTATATTTTC
CTTTTCGTTCCATTTCAGGTTAGCACCCTACCGCCTGAAGAATCATTCCA
TCGAAATTATGTGGTGAGTTCCAGTTTTGTTATAAAAATTATctcaaata
caccttttcgaccgtagccaccaattgccgcgcgggcatttttttgtccg
ttttaccaccctaaaaccgtcccagtctttttttcgcacccattatagac
aatagaaaaaaagtgtcaaaaaaggattggatcgagtttagggtggtaaa
ttaaataataaagtagcACGCGCCTGACCGGGCGACTACGGTCGAATTTG
ATAACACCGCCATAATACCCCAAGATTGTTAACGTACGTACTTTTGTTTA
TACTATTGTATATGTACGTACTTCTTATATTATAAGAACCCATAAGTTTT
AGACTAACTTtggctttttttatttttatttgtctCAGATAATCCGTCCA
AACTCGCTCGAACCCATGCCCTTAGTATGctatttttatgattctgatag
cactCACAATTTAACCAACGCCCATCAGTAAAATTAAAAGGCGCTGCAAT
GTTCTCTAGTGGGTACAACCCCCCCTCCCTCCCCCAAAAGGAAAATGCAT
GCAAATgtgaacttttcaaaaatttatttccttCAATGTTGAGTGGATTG
GGCTTCTGGAATTGTCTCCCAAACTCTCCAAATCCAATTAAAACAACATT
GGCCCTGGAAAATGGGTTTTCAgagcttattttgaaatttttcttgcatt
tttgaaaagtctacttAACCTTTTGCCCGTATTTGTAAACTTaattccta
aatttcttttctttcagttCGACCTTTTGGAAACGAAAATTACTGGTGTT
GTCTCTAAATATTTGAAGAAGATGAGATATGAAGATGAATTTGAGTCTTT
CAATGATATGTACAAAATCTATTACGGACCATTTTCACCCTTCGGCGTTC
CTGATGTAAGTTATATTATTATGTTATTGCCAAGcccaaatacacgtttt
ttttaataagaacaaatcatataagaacataaggattcgctggccaaaat
gttaagaacaatttatgaacattttaaggctttgtggactttcctttgga
aaataataaaaaatatcctcaaaatggtcaaaataagagcatgttaaaaa
catttttaggcttaaaactcaaaaagttaagaacatccgaaagcttcaaa
atttttggattgttcttataaaaaaatactataATATGATAATACGGTaa
tgttacgggataatataaTAGCATCAGTTTGTACAAAAAAGTTGCCCCTT
GCAATATAGTTTGCCTATTTTCTACTATGTCCGTATTAGTCGTTTAGCAT
GCTAGATTGGCAAGAATAAAGCTTTTCGTCCCACAATGACAATTAGTTTC
TCCATTTGACCCATATTGACCTCTAACTTTTCACATGGTCGCTGAGGTAG
GATGGTAGCTATATAAACTAAACTAAGGAGGTTCTTTTTGCTGAATTCAA
ATTTTATGATAACTttaaattgggcttttccagaaaaaaaccgtataccc
cctgttgaggaggtccatttccgatttccgttccaagggggtaaggtttg
atatgtggcggaattccataggaagacaaaaaaatctgtcaaaaataact
ggaattccatgggggtagcctTTTAAATTCTACTAAAATTCCAAATTCCA
GAgaggtttaaacctgaaattgcctggaatccAGGGGTTTGCAGCATTTC
CAGCTACAAAATGATGGACCTCCAttctcaacagggggtatacggttttt
tttctggaaaagcccattttacAGACGACATCCACTTTTTGCCGCGATTC
TTTCATTTCCCTAACATCCCTAGGACTTTATAAGGATTGAGAATATTAGT
TCGTTGTTATTATTTAGTTTTCATTAATTTATTAGGGTCATTCTGGATGG
AGAACAGATGAGAAATTTGCACGATTGAGATTGACCGGACCTAATTGCAC
TGTCATTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004959XLOC_004959Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008833-exon-sc0000088-1491911889:163342..163579TCONS_00008833-exon-sc0000088-1491911889:163342..163579Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1510915933:163342..163579TCONS_00008833-exon-sc0000088-1510915933:163342..163579Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1575043694:163342..163579TCONS_00008833-exon-sc0000088-1575043694:163342..163579Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1491911889:164737..165026TCONS_00008833-exon-sc0000088-1491911889:164737..165026Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1510915933:164737..165026TCONS_00008833-exon-sc0000088-1510915933:164737..165026Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1575043694:164737..165026TCONS_00008833-exon-sc0000088-1575043694:164737..165026Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1491911889:165757..165801TCONS_00008833-exon-sc0000088-1491911889:165757..165801Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1510915933:165757..165801TCONS_00008833-exon-sc0000088-1510915933:165757..165801Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1575043694:165757..165801TCONS_00008833-exon-sc0000088-1575043694:165757..165801Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1491911889:166758..166895TCONS_00008833-exon-sc0000088-1491911889:166758..166895Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1510915933:166758..166895TCONS_00008833-exon-sc0000088-1510915933:166758..166895Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1575043694:166758..166895TCONS_00008833-exon-sc0000088-1575043694:166758..166895Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1491911889:182027..182100TCONS_00008833-exon-sc0000088-1491911889:182027..182100Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1510915933:182027..182100TCONS_00008833-exon-sc0000088-1510915933:182027..182100Clytia hemisphaericaexon
TCONS_00008833-exon-sc0000088-1575043694:182027..182100TCONS_00008833-exon-sc0000088-1575043694:182027..182100Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088supercontigsc0000088:163342..182100 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.36759e-06	2.61705	0	0	0	0	0	0	0.000115403	3.07731e-06	0	0	0	1.2632	2.33986	0	4.77052	0	0	27.963	20.2947	0	5.10324e-06	3.00345	1.46409	0	0	0	0.0157104
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008833 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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