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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008816 ID=TCONS_00008816|Name=TCONS_00008816|organism=Clytia hemisphaerica|type=transcript|length=1166bp
aatatttttggttgaCAAATGAGAAAAGTATTTAACCGGTTTTACCCAGG
CGTAACTAATCGAAAAATTCGATTACCGAAATCATCGAATTtaatcgaaa
ctaatcgaagCGATTAGACTTCGATTAGTCGAACTCATCGAAGactaatc
gaactaattgagattcaaaaaaggttggaaatttcgattaattcgattag
ATTCAATAAGCTTCGAATATCTTCGATTACTTCGATTAGGTTTCGATAAA
TTCGATTACTTGACTTCGATTACTTCGATTAGCCGTAGATTAATTTGATT
ACTAGACTTCGATTTTTAAATGATATTTTTGTTTAGACGAGGTGAATCGC
ATAATTTGTTTAACCGCCTCTCATACTTCACTGACGATGTCTTTTTCCAT
TCTGTTTTTAGATCCCGTTCGCCGATCGATCAAGCTATCGGAAAAATATG
GCTTCGAAGATCTGGAACATGTTCTTCGGAAGTTGACTTGAAGAATAGAC
CTTCTGATTTTCGGCCCTTTTTTGAAATGGCGAATAAGAAATAATGACGT
AGTCACTAATAATGAAGCGACCGTGATTGGAAATTCCATTGTGTTCTACG
AAAGCCAGTTGTATACAATCTTTGATTCACTAAACGAAAAACAATGTCTA
TTCTTCGTATTTTCATTCTAAAGTTAGGACAGAAAATTGTTTACGTTTTA
TAACGCGAATCGCCTATTTGCAGCCCAAGATGAAGGCGTTGTAAAGTGAT
ATGGAACGGAGAAATGAAAAAGAgttaattgttaaataattgaaaaatat
caaatgccgtcatcatgtcatttttaattactACAACACTATCCCAAGAG
GCTTGTTAGTGTTCTGAGTAGCTAGGAATAAATGTTCAATATTAATAGTC
AATCATTGTTCATGTGAATACAAtgtctttttatattttgtatagTGATA
ATTTAGGAGTTAAAATGTTATGTATTACTACTTTCCAGAAGAAGAAAGTG
GGAAGGGTAAGGCTCCAAACACTTTACAACAGGATAAGAACATTTATTAA
AGAAACGGACGTCGCGGTCTCATAGTGGGAACCCCCCCTAACTTTAGGGG
GGGTTGgaggttttcagaaaaatttaagcaggtgggggttagcctgctca
caaatcttaggtgggg Run BLAST on NCBI transcript from alignment at sc0000087:573061..574226 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008816 ID=TCONS_00008816|Name=TCONS_00008816|organism=Clytia hemisphaerica|type=transcript|length=1166bp|location=Sequence derived from alignment at sc0000087:573061..574226 (Clytia hemisphaerica)
ccccacctaagatttgtgagcaggctaacccccacctgcttaaatttttc
tgaaaacctcCAACCCCCCCTAAAGTTAGGGGGGGTTCCCACTATGAGAC
CGCGACGTCCGTTTCTTTAATAAATGTTCTTATCCTGTTGTAAAGTGTTT
GGAGCCTTACCCTTCCCACTTTCTTCTTCTGGAAAGTAGTAATACATAAC
ATTTTAACTCCTAAATTATCActatacaaaatataaaaagacaTTGTATT
CACATGAACAATGATTGACTATTAATATTGAACATTTATTCCTAGCTACT
CAGAACACTAACAAGCCTCTTGGGATAGTGTTGTagtaattaaaaatgac
atgatgacggcatttgatatttttcaattatttaacaattaacTCTTTTT
CATTTCTCCGTTCCATATCACTTTACAACGCCTTCATCTTGGGCTGCAAA
TAGGCGATTCGCGTTATAAAACGTAAACAATTTTCTGTCCTAACTTTAGA
ATGAAAATACGAAGAATAGACATTGTTTTTCGTTTAGTGAATCAAAGATT
GTATACAACTGGCTTTCGTAGAACACAATGGAATTTCCAATCACGGTCGC
TTCATTATTAGTGACTACGTCATTATTTCTTATTCGCCATTTCAAAAAAG
GGCCGAAAATCAGAAGGTCTATTCTTCAAGTCAACTTCCGAAGAACATGT
TCCAGATCTTCGAAGCCATATTTTTCCGATAGCTTGATCGATCGGCGAAC
GGGATCTAAAAACAGAATGGAAAAAGACATCGTCAGTGAAGTATGAGAGG
CGGTTAAACAAATTATGCGATTCACCTCGTCTAAACAAAAATATCATTTA
AAAATCGAAGTCTAGTAATCAAATTAATCTACGGCTAATCGAAGTAATCG
AAGTCAAGTAATCGAATTTATCGAAACCTAATCGAAGTAATCGAAGATAT
TCGAAGCTTATTGAATctaatcgaattaatcgaaatttccaacctttttt
gaatctcaattagttcgattagtCTTCGATGAGTTCGACTAATCGAAGTC
TAATCGcttcgattagtttcgattaAATTCGATGATTTCGGTAATCGAAT
TTTTCGATTAGTTACGCCTGGGTAAAACCGGTTAAATACTTTTCTCATTT
Gtcaaccaaaaatatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008816-exon-sc0000087-1491911889:573061..574226 | TCONS_00008816-exon-sc0000087-1491911889:573061..574226 | Clytia hemisphaerica | exon |
| TCONS_00008816-exon-sc0000087-1510915933:573061..574226 | TCONS_00008816-exon-sc0000087-1510915933:573061..574226 | Clytia hemisphaerica | exon |
| TCONS_00008816-exon-sc0000087-1575043694:573061..574226 | TCONS_00008816-exon-sc0000087-1575043694:573061..574226 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087 | supercontig | sc0000087:573061..574226 . |
Blast
The following BLAST results are available for this feature:
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