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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008815 ID=TCONS_00008815|Name=TCONS_00008815|organism=Clytia hemisphaerica|type=transcript|length=2985bp
TTTATAACAGGATAAGAACATTTATTAAAGAAACGGACGTCGCGGTCTCT
CGTCCTCCCtaggaaatatcttttgacGAAAGGGATTATTTCTAAAGCTA
CAGGCTTGATAATGAGACAGGGTACAATATGAAGACATAATTTTCCGTTC
GTTCATATGTTGTTCATTCTCTCGGGGGTCTCTCTCACATCCCCTGGCTT
AAGTCATCTCTGAGACAGGGGTACAAATATTTCTGCAAGCGGAAATTGAA
AAAAGGGGTAAGAAAGTATGACACGGTGGAGCCCCTTCCTAGTGGAACAA
TTGATAATAAACAATCGGCCCGGTGAGAAGCCCAGACATTCGAGAACTCA
ATCTCgaactgaaaaatatttattttctatatTCCTTACCGTTTCATTGT
CCTTCATTTTTCCAAAGGGCATAAAAATTCTCACCGGGCACTGAGAGAGA
CGGTgttataaagtattttctttcgcTAAGAAAGAATAAAAAGTACATTT
TCCAAGTAAGGGCCTAAAAAGTTTGCTGCCAACTACAAGTATACTATGCA
TCTGAGCATTCAATACCATATAAAATTAATTCTGTCTCATGTCTTTGTGT
TCATGGCGATCCCACGCTGGTTCTGgattcattaaagtgccaccataata
cccctgtctcagtgactcaGTTAAGTTTTGAAATCGACCATCGGAGTGGC
TATGAAACAAGTAAAACGTCACACCCACCGGGTCTGtatttgtgagcaaa
aaaacttttcgccGGAGTacggaaaattcacttttaagCATTGTTCCTAG
AattcattaataatttttttttacgattttcaCTGGGTTGACCTAGTTGT
AGTAGAGGTGTCAAAATACCGACAGTACTCCAAACAGCCACAACCTTTGA
TTCAAATACTTTTGCTTGCTTCGTTTTTGCATTGTTGGAATCTTCTTCAA
ATTCTGCGTCGATCGGTAGGTGATTTGTAGGCACTTAAAGCAGAACGAAG
GTCACCGGAGcctctgaaagtcaaactttcgatgaaattcaatgaggtca
aatttctgaaaatggcttGGCAGTGAACAAGTGAATTAGgtcattttttg
tattttttttcactgGTTTCCATCGGGACGATCCgttcactgatacaggg
gtgtatcatACGTTTTCTCTTATCAATTTGTCGATAAATCTTAGAGTCAA
CCAGAGCGTTATTGATAATCTTCTCCCGTCTCTCAAGTATCTGAGATTGT
TCAGTACAACCTGAATNGGTGTATCATACGTTTTCTCTTATCATTTTGTC
GATAAATCTTAGAGTCAACCAGAGCGTTATTGATAATCTTCTCCCGTCTC
TCAAGTATCTGAAATTGTTCAGTACAACCTGAAATAAcgggaaaacaaaa
atatacgatGATCGGGTTAATTTCTCTACTCTTTTTATCGGCTCAGCTAT
CACACCCAGTATCACTACGAAACTGGAAAAAAGTTAGCTTTTCACGGGGC
ATTAGTAGCAGTCGAGTGAtacttgagacaggggtatttaATGGATgcta
aacgtcaaaacaacatTCATTTATAACGCCCATAAAACAACGGGATATGT
ACACTGGGTTTTTTCAGGCGAAGTTTCTATTAACCTAACCCAGCCTGTGC
TAGATTCTTCTAGGGTAAAAAAGAAATACGCACCTGCTGAGTGTGATAGT
TTTCTGCTTTTAGATTCAATGCTATCTTTCGTAACCGCGGAATATAACGA
CCATACAACATGTGTTTGATGACATCGATCGATGctttgatgaaaatttg
attttcgtAAGTGGTCCAGTTTTTCTAATGCtcttcttttttattcattt
atttacttcacCCTTTTCATTTTCCTCTGGAACGAAACGCAAGcgtcaaa
ttaaaaaaacaacttgGATTTAGCTAATGTAGTCAGACCTTTCAGAACCG
TTTCATTTTCTTACATCGCACTTTCTATCATGAATTCAACTATACTTTTA
ATAGCGCAcactaattaaaattttattatcaatGATACTAAACGTACTAC
CCAAATAGATATCCCGTAGGTATTACACTTTTATGACacttgtaattttt
gaaaaatggtattgCTTCACCACAAAATATAGAGTGTTTGTTTGTTACGA
ATTACGGCCCGTCAAATGCTATCCACTTCACCCCGAAACGAGTGACTCGA
TTTTCTTGTATTCGATTGAAGATTGTTCCTCGtagaagaaacttttgaaa
atgaaattttctacacTCGCGAATTAGACCCTATTCGTCAAGTTCTACGG
TTTTATATTAACCCTAGTTTCGTCGGAAAGATACAATTGGCCCATAACCT
TCCAATTCTATCCGAGTCATCCCGCCTTACAGTATTCTAAACTTTCTATC
TATTTGGTTTGTCcatcgattgttttcttctCCGGAGCTCAAATCtaaat
gatttttatgattattttgtCTGCCGGGGCAGATTTAAAAACGGAGCTCT
CAAAGCCAAAAGTGACCTGTTGAAGGCATTTTATTCTCATCCAAAATGCG
TTATCCTGAGTGGTTTTAACAAAAGCGCCAAATTAAACGGTGCCCGTCCA
CCAGTAACgaaaataaagcctgggatacacgggaacGAAGTTGATCTATC
GCTAcgattaaaaaaaacgtgccgctcaaaaacaaagaaaacgatAGATT
CAATCCGTTGCCTTAAATACGGCACATATCTTAAACGCTTCATATATATT
CTTGTTGGAAAATATTGAAGATTCCACTCTAGTCCTTCAGGCTTTAAGCT
CAATAGATTTGAGGATAGATTTGATTTGATCAGAGGTAGAGTGAACTGAA
GATCGCATGGCCCGCACATTCACGCAATTAAATGACACAATCAAAATCGC
AATTCGGCGGTCAAGTTTATCAAGGTAATCGAAGGTAATTGAAAGTAATC
GAACGATAATCGAAAGTAATCGAAAGATAATCGAA Run BLAST on NCBI transcript from alignment at sc0000087:569339..572323 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008815 ID=TCONS_00008815|Name=TCONS_00008815|organism=Clytia hemisphaerica|type=transcript|length=2985bp|location=Sequence derived from alignment at sc0000087:569339..572323 (Clytia hemisphaerica)
TTCGATTATCTTTCGATTACTTTCGATTATCGTTCGATTACTTTCAATTA
CCTTCGATTACCTTGATAAACTTGACCGCCGAATTGCGATTTTGATTGTG
TCATTTAATTGCGTGAATGTGCGGGCCATGCGATCTTCAGTTCACTCTAC
CTCTGATCAAATCAAATCTATCCTCAAATCTATTGAGCTTAAAGCCTGAA
GGACTAGAGTGGAATCTTCAATATTTTCCAACAAGAATATATATGAAGCG
TTTAAGATATGTGCCGTATTTAAGGCAACGGATTGAATCTatcgttttct
ttgtttttgagcggcacgttttttttaatcgTAGCGATAGATCAACTTCg
ttcccgtgtatcccaggctttattttcGTTACTGGTGGACGGGCACCGTT
TAATTTGGCGCTTTTGTTAAAACCACTCAGGATAACGCATTTTGGATGAG
AATAAAATGCCTTCAACAGGTCACTTTTGGCTTTGAGAGCTCCGTTTTTA
AATCTGCCCCGGCAGacaaaataatcataaaaatcatttaGATTTGAGCT
CCGGagaagaaaacaatcgatgGACAAACCAAATAGATAGAAAGTTTAGA
ATACTGTAAGGCGGGATGACTCGGATAGAATTGGAAGGTTATGGGCCAAT
TGTATCTTTCCGACGAAACTAGGGTTAATATAAAACCGTAGAACTTGACG
AATAGGGTCTAATTCGCGAgtgtagaaaatttcattttcaaaagtttctt
ctaCGAGGAACAATCTTCAATCGAATACAAGAAAATCGAGTCACTCGTTT
CGGGGTGAAGTGGATAGCATTTGACGGGCCGTAATTCGTAACAAACAAAC
ACTCTATATTTTGTGGTGAAGcaataccatttttcaaaaattacaagtGT
CATAAAAGTGTAATACCTACGGGATATCTATTTGGGTAGTACGTTTAGTA
TCattgataataaaattttaattagtgTGCGCTATTAAAAGTATAGTTGA
ATTCATGATAGAAAGTGCGATGTAAGAAAATGAAACGGTTCTGAAAGGTC
TGACTACATTAGCTAAATCcaagttgtttttttaatttgacgCTTGCGTT
TCGTTCCAGAGGAAAATGAAAAGGgtgaagtaaataaatgaataaaaaag
aagaGCATTAGAAAAACTGGACCACTTacgaaaatcaaattttcatcaaa
gCATCGATCGATGTCATCAAACACATGTTGTATGGTCGTTATATTCCGCG
GTTACGAAAGATAGCATTGAATCTAAAAGCAGAAAACTATCACACTCAGC
AGGTGCGTATTTCTTTTTTACCCTAGAAGAATCTAGCACAGGCTGGGTTA
GGTTAATAGAAACTTCGCCTGAAAAAACCCAGTGTACATATCCCGTTGTT
TTATGGGCGTTATAAATGAatgttgttttgacgtttagcATCCATtaaat
acccctgtctcaagtaTCACTCGACTGCTACTAATGCCCCGTGAAAAGCT
AACTTTTTTCCAGTTTCGTAGTGATACTGGGTGTGATAGCTGAGCCGATA
AAAAGAGTAGAGAAATTAACCCGATCatcgtatatttttgttttcccgTT
ATTTCAGGTTGTACTGAACAATTTCAGATACTTGAGAGACGGGAGAAGAT
TATCAATAACGCTCTGGTTGACTCTAAGATTTATCGACAAAATGATAAGA
GAAAACGTATGATACACCNATTCAGGTTGTACTGAACAATCTCAGATACT
TGAGAGACGGGAGAAGATTATCAATAACGCTCTGGTTGACTCTAAGATTT
ATCGACAAATTGATAAGAGAAAACGTatgatacacccctgtatcagtgaa
cGGATCGTCCCGATGGAAACcagtgaaaaaaaatacaaaaaatgacCTAA
TTCACTTGTTCACTGCCaagccattttcagaaatttgacctcattgaatt
tcatcgaaagtttgactttcagaggCTCCGGTGACCTTCGTTCTGCTTTA
AGTGCCTACAAATCACCTACCGATCGACGCAGAATTTGAAGAAGATTCCA
ACAATGCAAAAACGAAGCAAGCAAAAGTATTTGAATCAAAGGTTGTGGCT
GTTTGGAGTACTGTCGGTATTTTGACACCTCTACTACAACTAGGTCAACC
CAGtgaaaatcgtaaaaaaaaattattaatgaatTCTAGGAACAATGctt
aaaagtgaattttccgtACTCCggcgaaaagtttttttgctcacaaataC
AGACCCGGTGGGTGTGACGTTTTACTTGTTTCATAGCCACTCCGATGGTC
GATTTCAAAACTTAACtgagtcactgagacaggggtattatggtggcact
ttaatgaatcCAGAACCAGCGTGGGATCGCCATGAACACAAAGACATGAG
ACAGAATTAATTTTATATGGTATTGAATGCTCAGATGCATAGTATACTTG
TAGTTGGCAGCAAACTTTTTAGGCCCTTACTTGGAAAATGTACTTTTTAT
TCTTTCTTAgcgaaagaaaatactttataacACCGTCTCTCTCAGTGCCC
GGTGAGAATTTTTATGCCCTTTGGAAAAATGAAGGACAATGAAACGGTAA
GGAatatagaaaataaatatttttcagttcGAGATTGAGTTCTCGAATGT
CTGGGCTTCTCACCGGGCCGATTGTTTATTATCAATTGTTCCACTAGGAA
GGGGCTCCACCGTGTCATACTTTCTTACCCCTTTTTTCAATTTCCGCTTG
CAGAAATATTTGTACCCCTGTCTCAGAGATGACTTAAGCCAGGGGATGTG
AGAGAGACCCCCGAGAGAATGAACAACATATGAACGAACGGAAAATTATG
TCTTCATATTGTACCCTGTCTCATTATCAAGCCTGTAGCTTTAGAAATAA
TCCCTTTCgtcaaaagatatttcctaGGGAGGACGAGAGACCGCGACGTC
CGTTTCTTTAATAAATGTTCTTATCCTGTTATAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008815-exon-sc0000087-1491911889:569339..572323 | TCONS_00008815-exon-sc0000087-1491911889:569339..572323 | Clytia hemisphaerica | exon |
| TCONS_00008815-exon-sc0000087-1510915933:569339..572323 | TCONS_00008815-exon-sc0000087-1510915933:569339..572323 | Clytia hemisphaerica | exon |
| TCONS_00008815-exon-sc0000087-1575043694:569339..572323 | TCONS_00008815-exon-sc0000087-1575043694:569339..572323 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087 | supercontig | sc0000087:569339..572323 . |
Blast
The following BLAST results are available for this feature:
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