TCONS_00008814 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008814
Unique NameTCONS_00008814
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4710

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008814 ID=TCONS_00008814|Name=TCONS_00008814|organism=Clytia hemisphaerica|type=transcript|length=4710bp
AAAACTTAGATTGACATCCAGATAATTAGCtatgatttttttgtaattgt
cagttttaataatttattttgaaatgaatttgaGCTTTGTCAGATTTTGC
AAGTGTTTTCAGTCTAGTcaggaaatttcatttttctttttggtttagAA
AATTTGAAGCCACGCAAGATCCAGAAGCCAGAGATCATGTTCTTGTCACA
ACACAGCGCAGAAAACATACCTTACGTCACAACCAAACATAACAGCCATG
ATAGTTTTTGGCTACTACCTGGTGTCAGTACCTCGCTTTTCTGTTTTGGA
TGTGCGATTGAAAACCTGGAGGATAAATCTGTATTGAATTACCGAAAGAA
ACATATTCTAACTGACTTGCTAGAGATTCTACTTACCAATAAGACTATAT
GGCAGCTTTTTGCAAGCAAAAATACAATCTATCGGCATGTGATTACTATT
TTGCTCAATATCCTAATCGAGAACAGTGACAAGGAAATGGGGGAGTTAAG
TTCAGAGCTATGTTTATTGATGACCAAGCGGACATCTCCTGAAAAGACTG
CACCTCTTATCATGGATCAACTTTTAATCAAATCCAAAAGTCTCCCTAAT
CCAAGCTTCATGACTTTCTTGAAAACTCTCATTACCGCTGTACCGTCGGT
TGTATTGAGTCTTTGTGACAACAAAGCCTTATTTGTAAATGAACTTCTCC
AGTTTATATCAACCTGTAAAAATGATATGCATCAACTATCCTGGTCACTT
CTCGCTTCTATACTAACTGCTGTTGTATCTGAACAAATACCATTATCTCA
AAACGTTTTGAAACAAATTCTGAAAACAATTGTTGATTCTAACTCAACAT
CTATCACTACTGACATTGAAATCATGAAATGTTTACAACCTTACTTAAAC
ATTAAGAGTGCTCAAACTTTATTACTTGAACACGAGTCTTCACATTTTAC
GACGGTATCGAATTCAGTTCTTGAGTTTATCAAGAAAATGTTACTGTGTA
GCAGTGAGGAATGTAAACGGATTGCCATTTCATGTCTAACTGATATTGCC
AGGATTGACGGTATCGACAGCTCGAATAACCAAGATGCAGAGTTTTCATC
GCTTCTCAATTTCATCATACAAAAAGGGATAACTGAATATCTACTTGAAC
TTTTATCATCGTCTCAAAGTGCAGTCTTGTGCCAGCTGTTTCAATGTTTA
GAGAAGTTGTCGcactcaaaaaaatttcattcccTTGGACACATGGTGTA
TGGATTCTCAGCTATTCTAAAAGCTGTTCACTCTACCGACGATCGAGCTT
GCTGTATGCAAGGTTTAGTTTTGATCGATTTGATTCTTGAAGGGCGCTCT
ACCGAAGAAGTCAAAACAAATGTTACCGAATCGCAAATTGACGAACTTAT
TAACCtcgttaaaaaatgttttacctCAAGCGACGATAAAATCAAATCCA
GTGCTTTCCGTTGCTTATGTACGTTCCTACAATCTTCAAAAACCATTTCA
TCAGCCAACCATGAAAAGATACTGAACTTATTTGAACTATCCTTCCAATA
CATGGAGCGAGAAATCTCAACATCACTTAATTCACAATTGAAGCAATACC
AGATCGATCTTGTATCCTATACATACAAATCTGTCCTCATTCTATTGCAT
CACATCTCTAATAAAGAAATCACCAGCTCTGCAAGTTCAATCGATCAACA
AAGTCAATCTGAACACACCAAGACCATAACAGACTTGTTATTTTTCATGT
GTGATAAATACTTTATCCCCCAAGCAGTCTTGAAATTTCTACCTCGTCGG
GATTTGAAATTCCAGGAAATCTTTTACCAAATGATTCTACACATCATGGA
ACTTGATGTAACCAAAGGAGAAATGCTTGCCAAGAAAATGTGCGAATCTT
CTTTCATATCATTGGTCTACGATTTCAAAGTCGTTGCTGCTCGTTTATCC
AATGATCCCAAATTAACATCAGTGCTTGGCAAACTACTCATGTATCTTTG
TATGGCGATTGACAGTTCAAATGTCCATCAATCGTTCGACGAGAATCTAC
TAAACAATATAACACATTTCAACACACCAATCCAGGAATGGAGACAACTT
CTGGAGGACAACGATTCCACCGAAGACTACAAATCCAGCCAACGCACAGT
ACTTCTCATCCTTTTAGCATGTAGCCATATGGCTGGCTGTATATTAATTC
CTCTACCCGTCTTGCAACCATTTCTCGAGAGAACAGCCATGAACCCTACT
CTCCTTTTCTCACTCACGACATTGGGGAAACGATACTTTCTTTATCTATG
TTGTCAAGTCGACATGTGTAATACGCAGCAATCGAGCCAATCGAATTCGA
CGTACCACAAACTGATATGGCAGATTTTCACCGATCAAAAAGAACATTTA
GAACTGTTAttccataattcgaaccttTTTCTTGCTTGGTTACTTCGAAT
GAACATACCCAACAAGATATTCCAGTCGTTTATCGAAAGACACTTCGCCT
CATCCGATCTCGATTCCTCAAATTTGACAAcagctctcgaccaatcaagc
ACGTTATTCATTTTCGTTGAACGATCTATCAAACAGTTCAGCTCTTTCAA
CAATGAAACTGTCCAAACGAATCTTTCATGTTATTTAGAATCTCTATTGA
GCAACAATATCGGCCATGAGAGATACGGCTACTTGAAACATCTCATCCAT
AAAGGTTTACTCTTTACTGAGGAATTCAATCACGTGGTCATTGCTGTTTT
CATTAAACTTCTTAATACCATCTCCACTCATTCAGattcccaaatctctg
acgAAGAACTCAAACTATTCTGCCGTATCATCGAATACATCCGCGAAGAC
GCTGTTCCTTCTCTTTNTTCAATCACGTGGTCATTGCTGTTTTCATTAAA
CTTCTTAATACCATCTCCACTCATTCAGattcccaaatctctgacgAAGA
ACTCAAACTGTTCTGCCGTATCATCGAATACATCCGCGAAGACGCTGTTC
CTACTCTTCTAATCGAAGCACTCAAATACAGTTATCTGATTTTGACCAGA
TCCATTAAACTGCAGGATATGAAACCAATATCAATCGCTGTAAAGAATAA
CACCATCTTTGCCACGTTTTCAAAGCTCTTCTTCAACAACGAAAAAGTTC
TTCAAACATCAAAAACCACTCTCTTACTGGAACGTCTCTATTCATCGATC
GTGTTGATGACATCCCAATTAATGCTATGTTCGCACATGTTCGCTACCAA
ACCTCCCAACCCAACGGTCGTCAACAAAACCTTACTCATTGAGCTGTTCT
CTTGTACCAACTTGCCAATTTTACAGTTGTCACTCACCAAATTTTGGAAC
TATATTTTCCAGTTAGGCGATCAAAACGATATGATTCAATTCCTCGATTC
AGAAAACAATGAATGTAATCTATCGGAAAACGATTACCAATTACTGTTGA
TTATTCTAGAGAACATAGTAGGCTACCAGGAACCTCTCCTAGGCTACGGA
GCTGTCTACTGTCTATTAAGTATGATCAAGAACTTACCTTTGACCAGAGA
TTACTTCTTTTCGTCACCCTGGACGCAAATACTGTACGATACACACTGCG
ATTCAACATTGGAAACCACCAACGCCTTAATGGTAACCCTTCACCATTTA
TCTGTTTATAATAAAGAGACTTCTCCGTTAAACAATGCTCAAAACGCTCT
TGGTTCACTTGCCAATACCACACAAATCATGGAAAAACCAGAATCTCAAA
AACTTGGTGCAGAACTTGTGTTGGTACTTTTGAACTATGTTCGTGAGATC
TTGGACCAATATCTTCATCAGATGGAGTACGATCATTTGAAGCGATTCAA
AGGTGATTTGAAGAATCTGGATAAATTCTGGAAAAGTCGAGAAACACAGA
CATCATTAGAATTCATTGATatatttggtttgtttttctCCAGTGATGTA
CGTTCAATCAATGTGTCGAGCTCTATCATTGAGATGAGGAAATTGTTGGA
AAAACGGATAActgaaattgatgatgatgaaaccGAATCGGATGATGGAG
ACTAATCCCGATTTCCCCGATTCTGGTTCaggatttatttttaattttcc
tcCTTTTCAAACTGTTTGATAACTTTTGAGATCATTAACTATACCATCTA
TATCATCCTAAGGGTTTTTGATGCGCAAGCTAAagcggcgtttgcgacga
cgggaaccgtctagttatTTTCTAAAAGTTTGGAATTAACTTCAGAAAGC
TAGTATTGAAAGAAATCTTTGCGGCTTTGCAGCTTTGTAGGTCGATGTTA
AAGTATAAACGGGTCTTAAAATATTTTGCGTCTTTAGCCACAGTCCATTA
TGAGTCAATTTACTTTTTACTACAGttatttttcagtatttttcttggta
tttttaacattttttcaataGTTTTTCATTGTTACGTTACCAGTTTGAAC
TTAATGAATGCGTTTCTTGAAAAGTAGATACACTgaggaaaattcttatt
ttcagTTGAAGGCAGCAAGTTGTTTGTTGTAGGATTCGAATCCGTTGTAG
AAAGAAACCTATAATCTTTAACGTTAAGATTTAAAAACCCTAGACTTTTT
TCTATAGTCcttactttttctttcatttagtACGAATTTATTGATTATCA
AAAGTTAGATTGTTCTATGTAATGTttaataagattttaaagtttaaaag
cATTTAGAAA
Run BLAST on NCBI

protein sequence of TCONS_00008814-protein

>TCONS_00008814-protein ID=TCONS_00008814-protein|Name=TCONS_00008814-protein|organism=Clytia hemisphaerica|type=polypeptide|length=941bp
MFLSQHSAENIPYVTTKHNSHDSFWLLPGVSTSLFCFGCAIENLEDKSVL
NYRKKHILTDLLEILLTNKTIWQLFASKNTIYRHVITILLNILIENSDKE
MGELSSELCLLMTKRTSPEKTAPLIMDQLLIKSKSLPNPSFMTFLKTLIT
AVPSVVLSLCDNKALFVNELLQFISTCKNDMHQLSWSLLASILTAVVSEQ
IPLSQNVLKQILKTIVDSNSTSITTDIEIMKCLQPYLNIKSAQTLLLEHE
SSHFTTVSNSVLEFIKKMLLCSSEECKRIAISCLTDIARIDGIDSSNNQD
AEFSSLLNFIIQKGITEYLLELLSSSQSAVLCQLFQCLEKLSHSKKFHSL
GHMVYGFSAILKAVHSTDDRACCMQGLVLIDLILEGRSTEEVKTNVTESQ
IDELINLVKKCFTSSDDKIKSSAFRCLCTFLQSSKTISSANHEKILNLFE
LSFQYMEREISTSLNSQLKQYQIDLVSYTYKSVLILLHHISNKEITSSAS
SIDQQSQSEHTKTITDLLFFMCDKYFIPQAVLKFLPRRDLKFQEIFYQMI
LHIMELDVTKGEMLAKKMCESSFISLVYDFKVVAARLSNDPKLTSVLGKL
LMYLCMAIDSSNVHQSFDENLLNNITHFNTPIQEWRQLLEDNDSTEDYKS
SQRTVLLILLACSHMAGCILIPLPVLQPFLERTAMNPTLLFSLTTLGKRY
FLYLCCQVDMCNTQQSSQSNSTYHKLIWQIFTDQKEHLELLFHNSNLFLA
WLLRMNIPNKIFQSFIERHFASSDLDSSNLTTALDQSSTLFIFVERSIKQ
FSSFNNETVQTNLSCYLESLLSNNIGHERYGYLKHLIHKGLLFTEEFNHV
VIAVFIKLLNTISTHSDSQISDEELKLFCRIIEYIREDAVPSLXSITWSL
LFSLNFLIPSPLIQIPKSLTKNSNCSAVSSNTSAKTLFLLF
Run BLAST on NCBI

transcript from alignment at sc0000087:557673..562382

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008814 ID=TCONS_00008814|Name=TCONS_00008814|organism=Clytia hemisphaerica|type=transcript|length=4710bp|location=Sequence derived from alignment at sc0000087:557673..562382 (Clytia hemisphaerica)
TTTCTAAATgcttttaaactttaaaatcttattaaACATTACATAGAACA
ATCTAACTTTTGATAATCAATAAATTCGTactaaatgaaagaaaaagtaa
gGACTATAGAAAAAAGTCTAGGGTTTTTAAATCTTAACGTTAAAGATTAT
AGGTTTCTTTCTACAACGGATTCGAATCCTACAACAAACAACTTGCTGCC
TTCAActgaaaataagaattttcctcAGTGTATCTACTTTTCAAGAAACG
CATTCATTAAGTTCAAACTGGTAACGTAACAATGAAAAACtattgaaaaa
atgttaaaaataccaagaaaaatactgaaaaataaCTGTAGTAAAAAGTA
AATTGACTCATAATGGACTGTGGCTAAAGACGCAAAATATTTTAAGACCC
GTTTATACTTTAACATCGACCTACAAAGCTGCAAAGCCGCAAAGATTTCT
TTCAATACTAGCTTTCTGAAGTTAATTCCAAACTTTTAGAAAataactag
acggttcccgtcgtcgcaaacgccgctTTAGCTTGCGCATCAAAAACCCT
TAGGATGATATAGATGGTATAGTTAATGATCTCAAAAGTTATCAAACAGT
TTGAAAAGgaggaaaattaaaaataaatcctGAACCAGAATCGGGGAAAT
CGGGATTAGTCTCCATCATCCGATTCggtttcatcatcatcaatttcagT
TATCCGTTTTTCCAACAATTTCCTCATCTCAATGATAGAGCTCGACACAT
TGATTGAACGTACATCACTGGagaaaaacaaaccaaatatATCAATGAAT
TCTAATGATGTCTGTGTTTCTCGACTTTTCCAGAATTTATCCAGATTCTT
CAAATCACCTTTGAATCGCTTCAAATGATCGTACTCCATCTGATGAAGAT
ATTGGTCCAAGATCTCACGAACATAGTTCAAAAGTACCAACACAAGTTCT
GCACCAAGTTTTTGAGATTCTGGTTTTTCCATGATTTGTGTGGTATTGGC
AAGTGAACCAAGAGCGTTTTGAGCATTGTTTAACGGAGAAGTCTCTTTAT
TATAAACAGATAAATGGTGAAGGGTTACCATTAAGGCGTTGGTGGTTTCC
AATGTTGAATCGCAGTGTGTATCGTACAGTATTTGCGTCCAGGGTGACGA
AAAGAAGTAATCTCTGGTCAAAGGTAAGTTCTTGATCATACTTAATAGAC
AGTAGACAGCTCCGTAGCCTAGGAGAGGTTCCTGGTAGCCTACTATGTTC
TCTAGAATAATCAACAGTAATTGGTAATCGTTTTCCGATAGATTACATTC
ATTGTTTTCTGAATCGAGGAATTGAATCATATCGTTTTGATCGCCTAACT
GGAAAATATAGTTCCAAAATTTGGTGAGTGACAACTGTAAAATTGGCAAG
TTGGTACAAGAGAACAGCTCAATGAGTAAGGTTTTGTTGACGACCGTTGG
GTTGGGAGGTTTGGTAGCGAACATGTGCGAACATAGCATTAATTGGGATG
TCATCAACACGATCGATGAATAGAGACGTTCCAGTAAGAGAGTGGTTTTT
GATGTTTGAAGAACTTTTTCGTTGTTGAAGAAGAGCTTTGAAAACGTGGC
AAAGATGGTGTTATTCTTTACAGCGATTGATATTGGTTTCATATCCTGCA
GTTTAATGGATCTGGTCAAAATCAGATAACTGTATTTGAGTGCTTCGATT
AGAAGAGTAGGAACAGCGTCTTCGCGGATGTATTCGATGATACGGCAGAA
CAGTTTGAGTTCTTcgtcagagatttgggaatCTGAATGAGTGGAGATGG
TATTAAGAAGTTTAATGAAAACAGCAATGACCACGTGATTGAANAAAGAG
AAGGAACAGCGTCTTCGCGGATGTATTCGATGATACGGCAGAATAGTTTG
AGTTCTTcgtcagagatttgggaatCTGAATGAGTGGAGATGGTATTAAG
AAGTTTAATGAAAACAGCAATGACCACGTGATTGAATTCCTCAGTAAAGA
GTAAACCTTTATGGATGAGATGTTTCAAGTAGCCGTATCTCTCATGGCCG
ATATTGTTGCTCAATAGAGATTCTAAATAACATGAAAGATTCGTTTGGAC
AGTTTCATTGTTGAAAGAGCTGAACTGTTTGATAGATCGTTCAACGAAAA
TGAATAACGTgcttgattggtcgagagctgTTGTCAAATTTGAGGAATCG
AGATCGGATGAGGCGAAGTGTCTTTCGATAAACGACTGGAATATCTTGTT
GGGTATGTTCATTCGAAGTAACCAAGCAAGAAAaaggttcgaattatgga
aTAACAGTTCTAAATGTTCTTTTTGATCGGTGAAAATCTGCCATATCAGT
TTGTGGTACGTCGAATTCGATTGGCTCGATTGCTGCGTATTACACATGTC
GACTTGACAACATAGATAAAGAAAGTATCGTTTCCCCAATGTCGTGAGTG
AGAAAAGGAGAGTAGGGTTCATGGCTGTTCTCTCGAGAAATGGTTGCAAG
ACGGGTAGAGGAATTAATATACAGCCAGCCATATGGCTACATGCTAAAAG
GATGAGAAGTACTGTGCGTTGGCTGGATTTGTAGTCTTCGGTGGAATCGT
TGTCCTCCAGAAGTTGTCTCCATTCCTGGATTGGTGTGTTGAAATGTGTT
ATATTGTTTAGTAGATTCTCGTCGAACGATTGATGGACATTTGAACTGTC
AATCGCCATACAAAGATACATGAGTAGTTTGCCAAGCACTGATGTTAATT
TGGGATCATTGGATAAACGAGCAGCAACGACTTTGAAATCGTAGACCAAT
GATATGAAAGAAGATTCGCACATTTTCTTGGCAAGCATTTCTCCTTTGGT
TACATCAAGTTCCATGATGTGTAGAATCATTTGGTAAAAGATTTCCTGGA
ATTTCAAATCCCGACGAGGTAGAAATTTCAAGACTGCTTGGGGGATAAAG
TATTTATCACACATGAAAAATAACAAGTCTGTTATGGTCTTGGTGTGTTC
AGATTGACTTTGTTGATCGATTGAACTTGCAGAGCTGGTGATTTCTTTAT
TAGAGATGTGATGCAATAGAATGAGGACAGATTTGTATGTATAGGATACA
AGATCGATCTGGTATTGCTTCAATTGTGAATTAAGTGATGTTGAGATTTC
TCGCTCCATGTATTGGAAGGATAGTTCAAATAAGTTCAGTATCTTTTCAT
GGTTGGCTGATGAAATGGTTTTTGAAGATTGTAGGAACGTACATAAGCAA
CGGAAAGCACTGGATTTGATTTTATCGTCGCTTGaggtaaaacatttttt
aacgaGGTTAATAAGTTCGTCAATTTGCGATTCGGTAACATTTGTTTTGA
CTTCTTCGGTAGAGCGCCCTTCAAGAATCAAATCGATCAAAACTAAACCT
TGCATACAGCAAGCTCGATCGTCGGTAGAGTGAACAGCTTTTAGAATAGC
TGAGAATCCATACACCATGTGTCCAAgggaatgaaatttttttgagtgCG
ACAACTTCTCTAAACATTGAAACAGCTGGCACAAGACTGCACTTTGAGAC
GATGATAAAAGTTCAAGTAGATATTCAGTTATCCCTTTTTGTATGATGAA
ATTGAGAAGCGATGAAAACTCTGCATCTTGGTTATTCGAGCTGTCGATAC
CGTCAATCCTGGCAATATCAGTTAGACATGAAATGGCAATCCGTTTACAT
TCCTCACTGCTACACAGTAACATTTTCTTGATAAACTCAAGAACTGAATT
CGATACCGTCGTAAAATGTGAAGACTCGTGTTCAAGTAATAAAGTTTGAG
CACTCTTAATGTTTAAGTAAGGTTGTAAACATTTCATGATTTCAATGTCA
GTAGTGATAGATGTTGAGTTAGAATCAACAATTGTTTTCAGAATTTGTTT
CAAAACGTTTTGAGATAATGGTATTTGTTCAGATACAACAGCAGTTAGTA
TAGAAGCGAGAAGTGACCAGGATAGTTGATGCATATCATTTTTACAGGTT
GATATAAACTGGAGAAGTTCATTTACAAATAAGGCTTTGTTGTCACAAAG
ACTCAATACAACCGACGGTACAGCGGTAATGAGAGTTTTCAAGAAAGTCA
TGAAGCTTGGATTAGGGAGACTTTTGGATTTGATTAAAAGTTGATCCATG
ATAAGAGGTGCAGTCTTTTCAGGAGATGTCCGCTTGGTCATCAATAAACA
TAGCTCTGAACTTAACTCCCCCATTTCCTTGTCACTGTTCTCGATTAGGA
TATTGAGCAAAATAGTAATCACATGCCGATAGATTGTATTTTTGCTTGCA
AAAAGCTGCCATATAGTCTTATTGGTAAGTAGAATCTCTAGCAAGTCAGT
TAGAATATGTTTCTTTCGGTAATTCAATACAGATTTATCCTCCAGGTTTT
CAATCGCACATCCAAAACAGAAAAGCGAGGTACTGACACCAGGTAGTAGC
CAAAAACTATCATGGCTGTTATGTTTGGTTGTGACGTAAGGTATGTTTTC
TGCGCTGTGTTGTGACAAGAACATGATCTCTGGCTTCTGGATCTTGCGTG
GCTTCAAATTTTctaaaccaaaaagaaaaatgaaatttcctgACTAGACT
GAAAACACTTGCAAAATCTGACAAAGCtcaaattcatttcaaaataaatt
attaaaactgacaattacaaaaaaatcataGCTAATTATCTGGATGTCAA
TCTAAGTTTT

Coding sequence (CDS) from alignment at sc0000087:557673..562382

>TCONS_00008814 ID=TCONS_00008814|Name=TCONS_00008814|organism=Clytia hemisphaerica|type=CDS|length=2826bp|location=Sequence derived from alignment at sc0000087:557673..562382 (Clytia hemisphaerica)
TTAGAAGAGTAGGAACAGCGTCTTCGCGGATGTATTCGATGATACGGCAG
AACAGTTTGAGTTCTTcgtcagagatttgggaatCTGAATGAGTGGAGAT
GGTATTAAGAAGTTTAATGAAAACAGCAATGACCACGTGATTGAANAAAG
AGAAGGAACAGCGTCTTCGCGGATGTATTCGATGATACGGCAGAATAGTT
TGAGTTCTTcgtcagagatttgggaatCTGAATGAGTGGAGATGGTATTA
AGAAGTTTAATGAAAACAGCAATGACCACGTGATTGAATTCCTCAGTAAA
GAGTAAACCTTTATGGATGAGATGTTTCAAGTAGCCGTATCTCTCATGGC
CGATATTGTTGCTCAATAGAGATTCTAAATAACATGAAAGATTCGTTTGG
ACAGTTTCATTGTTGAAAGAGCTGAACTGTTTGATAGATCGTTCAACGAA
AATGAATAACGTgcttgattggtcgagagctgTTGTCAAATTTGAGGAAT
CGAGATCGGATGAGGCGAAGTGTCTTTCGATAAACGACTGGAATATCTTG
TTGGGTATGTTCATTCGAAGTAACCAAGCAAGAAAaaggttcgaattatg
gaaTAACAGTTCTAAATGTTCTTTTTGATCGGTGAAAATCTGCCATATCA
GTTTGTGGTACGTCGAATTCGATTGGCTCGATTGCTGCGTATTACACATG
TCGACTTGACAACATAGATAAAGAAAGTATCGTTTCCCCAATGTCGTGAG
TGAGAAAAGGAGAGTAGGGTTCATGGCTGTTCTCTCGAGAAATGGTTGCA
AGACGGGTAGAGGAATTAATATACAGCCAGCCATATGGCTACATGCTAAA
AGGATGAGAAGTACTGTGCGTTGGCTGGATTTGTAGTCTTCGGTGGAATC
GTTGTCCTCCAGAAGTTGTCTCCATTCCTGGATTGGTGTGTTGAAATGTG
TTATATTGTTTAGTAGATTCTCGTCGAACGATTGATGGACATTTGAACTG
TCAATCGCCATACAAAGATACATGAGTAGTTTGCCAAGCACTGATGTTAA
TTTGGGATCATTGGATAAACGAGCAGCAACGACTTTGAAATCGTAGACCA
ATGATATGAAAGAAGATTCGCACATTTTCTTGGCAAGCATTTCTCCTTTG
GTTACATCAAGTTCCATGATGTGTAGAATCATTTGGTAAAAGATTTCCTG
GAATTTCAAATCCCGACGAGGTAGAAATTTCAAGACTGCTTGGGGGATAA
AGTATTTATCACACATGAAAAATAACAAGTCTGTTATGGTCTTGGTGTGT
TCAGATTGACTTTGTTGATCGATTGAACTTGCAGAGCTGGTGATTTCTTT
ATTAGAGATGTGATGCAATAGAATGAGGACAGATTTGTATGTATAGGATA
CAAGATCGATCTGGTATTGCTTCAATTGTGAATTAAGTGATGTTGAGATT
TCTCGCTCCATGTATTGGAAGGATAGTTCAAATAAGTTCAGTATCTTTTC
ATGGTTGGCTGATGAAATGGTTTTTGAAGATTGTAGGAACGTACATAAGC
AACGGAAAGCACTGGATTTGATTTTATCGTCGCTTGaggtaaaacatttt
ttaacgaGGTTAATAAGTTCGTCAATTTGCGATTCGGTAACATTTGTTTT
GACTTCTTCGGTAGAGCGCCCTTCAAGAATCAAATCGATCAAAACTAAAC
CTTGCATACAGCAAGCTCGATCGTCGGTAGAGTGAACAGCTTTTAGAATA
GCTGAGAATCCATACACCATGTGTCCAAgggaatgaaatttttttgagtg
CGACAACTTCTCTAAACATTGAAACAGCTGGCACAAGACTGCACTTTGAG
ACGATGATAAAAGTTCAAGTAGATATTCAGTTATCCCTTTTTGTATGATG
AAATTGAGAAGCGATGAAAACTCTGCATCTTGGTTATTCGAGCTGTCGAT
ACCGTCAATCCTGGCAATATCAGTTAGACATGAAATGGCAATCCGTTTAC
ATTCCTCACTGCTACACAGTAACATTTTCTTGATAAACTCAAGAACTGAA
TTCGATACCGTCGTAAAATGTGAAGACTCGTGTTCAAGTAATAAAGTTTG
AGCACTCTTAATGTTTAAGTAAGGTTGTAAACATTTCATGATTTCAATGT
CAGTAGTGATAGATGTTGAGTTAGAATCAACAATTGTTTTCAGAATTTGT
TTCAAAACGTTTTGAGATAATGGTATTTGTTCAGATACAACAGCAGTTAG
TATAGAAGCGAGAAGTGACCAGGATAGTTGATGCATATCATTTTTACAGG
TTGATATAAACTGGAGAAGTTCATTTACAAATAAGGCTTTGTTGTCACAA
AGACTCAATACAACCGACGGTACAGCGGTAATGAGAGTTTTCAAGAAAGT
CATGAAGCTTGGATTAGGGAGACTTTTGGATTTGATTAAAAGTTGATCCA
TGATAAGAGGTGCAGTCTTTTCAGGAGATGTCCGCTTGGTCATCAATAAA
CATAGCTCTGAACTTAACTCCCCCATTTCCTTGTCACTGTTCTCGATTAG
GATATTGAGCAAAATAGTAATCACATGCCGATAGATTGTATTTTTGCTTG
CAAAAAGCTGCCATATAGTCTTATTGGTAAGTAGAATCTCTAGCAAGTCA
GTTAGAATATGTTTCTTTCGGTAATTCAATACAGATTTATCCTCCAGGTT
TTCAATCGCACATCCAAAACAGAAAAGCGAGGTACTGACACCAGGTAGTA
GCCAAAAACTATCATGGCTGTTATGTTTGGTTGTGACGTAAGGTATGTTT
TCTGCGCTGTGTTGTGACAAGAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004949XLOC_004949Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008814-proteinTCONS_00008814-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008814-exon-sc0000087-1491911889:557673..562382TCONS_00008814-exon-sc0000087-1491911889:557673..562382Clytia hemisphaericaexon
TCONS_00008814-exon-sc0000087-1510915933:557673..562382TCONS_00008814-exon-sc0000087-1510915933:557673..562382Clytia hemisphaericaexon
TCONS_00008814-exon-sc0000087-1575043694:557673..562382TCONS_00008814-exon-sc0000087-1575043694:557673..562382Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:557673..562382 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.441403	0.415344	1.38332	1.36209	1.56159	0.999556	0.624996	0.692561	0.39853	0.446041	0.233613	0.262475	0.104844	0.0544407	0.11637	0.150336	0.2071	0.145557	0.0928927	0.140287	0.32008	0.379158	0.0815898	0.140151	1.86181	2.07271	0.187455	0.138416	0.362477	0.297871
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008814 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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