TCONS_00008781 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008781
Unique NameTCONS_00008781
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1838

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008781 ID=TCONS_00008781|Name=TCONS_00008781|organism=Clytia hemisphaerica|type=transcript|length=1838bp
ATCCATACCAGCATGTAGCTTTTCAAAGTTATATCAAGAATTCATTGACT
TCAAATCTGTACCGTCCTAAAAATCTGACCTACACAAACAAGAGGATTAT
AGTCGGTTTTGCGACAGAGGGAAGTTCTTCctcagaagaagaagaagaag
acttCACAGAAGATTTCAGTTGGGAGAATCTACAACACCGCACTGAAAAA
CACCTAATCGAGGCTGACCCAACATCATTCACAATGAAAATAATATCAAG
TTTAGAAGAGAATCATTCGTTCGTTTTAAAGCGACGTCTTCTCATCATGG
CCTTCATTTTTCGCATGTTTCTTATCGGAGTTCAATATTCAGTGATTTTA
CCAACTTGTATGCTGTATATGAAAAAATTTGGTGTCGGCGAAACTTTCAC
CGGGACTGTCATTGCAGCTTATCCGTTCGCTAGCATGATTTCAGCTTTCG
TTGTTGGCTACGCATACAACAAGACAAGACGAGTCAAAGAGATCATATTG
ATTATGAATACTTTTCAGATCATCGGTAATATCGTTTACGCGCTACCCTA
CTCGCCGTTTTTACCACTCGCGGGACGTTTTATTTGTGGACTTGGGGATA
GCTTTATTGGTGCTACCATTGGTGAGATTTGCGAGTTATATCCAAAGACC
CACCGTACGGGTATCATATCCTTGATCGAGTTTGGCCGTATCTTTGGTTT
TATGTTAGGTCCATTACTCCATATGGTCATACAACGAAAGCGGTATCAGC
TTGGTGGTATCGAATTCGATAGTACCACGTTCCCAGGGCTTGCCATGACT
TGTTTTTGGATCATCATGCAGTTGGTGACGCTATTCTGGGTCCGCAATCT
TGCAAAATCCATTCGCGAGAATCCTGAGTTGATGGATGAAAGAGATAAAG
AGTTTTCCTTCACCGATAAAGCaacagaagaagaaaaaaagcttCTGTCT
GAAGAAAATGTAAAGTCACGTGATCAAAAAATGTCTAATCACCATGGCAa
caaggaggaagaaaaaccaACTTATCTTAATAATAACAACAAAGAGAGAC
GCACGCAaccaaatatttttgaagagATTTCACGTCTCTGTACGGCTAAT
GTCATCGTCATATTCTACCTGGATACGGTGCTATGGCTTGCTCAATCCGT
TTTCGAATTCTTGTTACCACTTATTGCGGAATTTGAATACGGTTGGACAC
CTTTCCAAACGGGCGTGGTTTACATGGCAGGTGGCATCGAACTCATCATG
GTTTTCGGCTACTTGTATTACATCAGTAAACGTAATAATTTTCGCGATAC
TTATCTCATTTTATGGTCGTTGGTAATGACTCTATTATCCTTAATGCTGC
TCATTTTTGAGCGTTTAATGCCGAAAACAAGTCAAAAAATTGGTATGTTT
GTCACAATTTGCGGGTTGATGTTCGTCGCTGTCCCGTTAAACCTGACCGG
TGTAAAATCTCTACTCTCCAAAATCACACGACCTGAGTTTCAAGGTATCA
CTCAAGGTCTTTACGGTTCGGTTTGTAGTTTTTCACTCATCATAGGGCCT
ATGTTGGGTAGTCTCATTTATAAGCATCGAGCGGAATATGGCGGAGTGAC
AGCCATGTTGTCTATCACCTGCATCTTAGCATTGTGTGTTTGTATGGAGA
AAATCCATGATCGGGAAGATCAAATCACAATAGAAACTGAAAACCAAGAA
TTCCTTAAAGATCTTGCTACCTTTAGAAgttgaaatcataaaaaatacga
aaatgacACAACATCAGGCAATGCAGATCTGTAGTAATACTTGAAGTCAA
AACAACGAACATTTGACGTTCATAACGGTCGTCGAAAT
Run BLAST on NCBI

protein sequence of TCONS_00008781-protein

>TCONS_00008781-protein ID=TCONS_00008781-protein|Name=TCONS_00008781-protein|organism=Clytia hemisphaerica|type=polypeptide|length=576bp
PYQHVAFQSYIKNSLTSNLYRPKNLTYTNKRIIVGFATEGSSSSEEEEED
FTEDFSWENLQHRTEKHLIEADPTSFTMKIISSLEENHSFVLKRRLLIMA
FIFRMFLIGVQYSVILPTCMLYMKKFGVGETFTGTVIAAYPFASMISAFV
VGYAYNKTRRVKEIILIMNTFQIIGNIVYALPYSPFLPLAGRFICGLGDS
FIGATIGEICELYPKTHRTGIISLIEFGRIFGFMLGPLLHMVIQRKRYQL
GGIEFDSTTFPGLAMTCFWIIMQLVTLFWVRNLAKSIRENPELMDERDKE
FSFTDKATEEEKKLLSEENVKSRDQKMSNHHGNKEEEKPTYLNNNNKERR
TQPNIFEEISRLCTANVIVIFYLDTVLWLAQSVFEFLLPLIAEFEYGWTP
FQTGVVYMAGGIELIMVFGYLYYISKRNNFRDTYLILWSLVMTLLSLMLL
IFERLMPKTSQKIGMFVTICGLMFVAVPLNLTGVKSLLSKITRPEFQGIT
QGLYGSVCSFSLIIGPMLGSLIYKHRAEYGGVTAMLSITCILALCVCMEK
IHDREDQITIETENQEFLKDLATFRS
Run BLAST on NCBI

transcript from alignment at sc0000087:376084..379498-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008781 ID=TCONS_00008781|Name=TCONS_00008781|organism=Clytia hemisphaerica|type=transcript|length=3415bp|location=Sequence derived from alignment at sc0000087:376084..379498- (Clytia hemisphaerica)
ATCCATACCAGCATGTAGCTTTTCAAAGTTATATCAAGAATTCATTGACT
TCAAATCTGTACCGTCCTAAAAATCTGACCTACACAAACAAGAGGATTAT
AGTCGGTTTTGCGACAGAGGGAAGTTCTTCCTCAGAAGAAGAAGAAGAAG
ACTTCACAGAAGATTTCAGTTGGGAGAATCTACAACACCGCACTGAAAAA
CACCTAATCGAGGCTGACCCAACATCATTCACAATGAAAATAATATCAAG
TTTAGAAGAGAATCATTCGTTCGTTTTAAAGCGACGTCTTCTTATTATGG
CCTTCATTTTTCGCATGTTTCTTATCGGAGTTCAATATTCAGTGATTTTA
CCAACTTGTATGCTGTATATGAAAAAATTCNCATTCGAGCCTTATCAATC
GTTACTGTAGGGCAAGTTGAACGTGTCAAGTTCGTGATATCATCGGGTAG
TTTTTGATAGGCAATACCATTTAGGTAAAATATATACCAACAGTAGCGTA
GCCAAGAGGAGCGCAGAATTTGTGTAGGGAGCAGATTTTTATGACACTGT
AATTATCTATTCATGGTATTAAAAGATAATTATAATGGCATAAAAATCTG
CTCTCCTACAAAAATTTTGCGCCCCTCTTGGCTACGCTACTGAACCAGCT
CTTGTTTTTTTGAACGATAAACATACTTATTCATGAGGGTTTTACGTGTA
CATTGATAACATTAAAAAACAGCCTATTTTTAAATAGCTCAGTCAATCAT
TGGGACCCTAAAAGCTAATGAATTTTCGATGAAATTTTATAAAATGTCAA
GCTTACAGTAGACAATAGTTTTTCGAAAAAATTCAAAGTGAGAATTTCAA
AAAATTTGTAAAAACAAATTTTCTTTTTTTAGTTAATAGGAAATAACAGT
GAACTGTTCTCGAAAAAAAAAATACATAAAAATGGAATATTTAGAAGAAA
AAGACAAAACTTTTATAGACTTAAAATTAAACAAAAGTTTTACAGATGGC
ACGAAGTTTGTCAAAAATATTACACATCCATAGGTCAAAGAATACAGTTA
TTATAAAGGGCGAAAAAATCAAGAACTTGGTTTGTTTTTGTGTCACAAAA
AGATGACTGAGGGAGATTAGAAAAATAGAGACATAAAACAAACCGAGACG
AAATGACATTTTTAGAATGAGTACAGTTTCAGAAAAAATTTCAAGAAGGA
CAGGCCATTATCCATACCAGCATGTAGCTTTTCAAAGTTATATCAAGAAT
TCATTGACTTCAAATCTGTACCGTCCTAAAAATCTGACCTACACAGACAA
GAGGATTATAGTTGGTTTTGCGACAGAGGGAAGTTCTTCCTCAGAAGAAG
AAGACTTCACAGAAGATTTCAGTTGGGAGAATCTACAACACCGCACTGAA
AAACATCAAATCGAGGCTGACCCGACATCATTCACAATGAAAATAATATC
AAGTTTAGAAGAGAATCATTCGTTCGTTTTAAAGCGACGTCTTCTCATCA
TGGCCTTCATTTTTCGCATGTTTCTTATCGGAGTTCAATATTCAGTGATT
TTACCAACTTGTATGCTGTATATGAAAAAATTTGGTGTCGGCGAAACTTT
CACCGGGACTGTCATTGCAGCTTATCCGTTCGCTAGCATGATTTCAGCTT
TCGTTGTTGGCTACGCATACAACAAGACAAGACGAGTCAAAGAGATCATA
TTGATTATGAATACTTTTCAGATCATCGGTAATATCGTTTACGCGCTACC
CTACTCGCCGTTTTTACCACTCGCGGGACGTTTTATTTGTGGACTTGGGG
ATAGCTTTATTGGTGCTACCATTGGTAAGATTCAATTTAGTATCCATACC
TTAGGTCTCTTTATATTTTCTTTAAAAATTCAATTGGATTCTTAGAAATA
AACAGAAATACAGAATGTATGATTAAAAGAAAAATATATTTTTTTATTTT
TATTCTATCGGGTTATTCCAGTAAAAACATTACCCCTCCCCATGTTGATG
AAGTATAAGTTTTCACCGTCGAGGTTGATGCCCTCAAATGATTTAACTTT
TCTTAGGGTCCCTTAAAACATAGGCAATTCCATGGAGGTCTCTCAAAATC
TGAGCGAAAATGCAAGTCAAAAAAGTTTAAAAACACAGAAATTAAGTTTT
CCCAGTCGTCTACATTAATTAATTTGAATTTCTCTTTCCTCTTATAAGGT
GAGATTTGCGAGTTATATCCAAAGACCCACCGTACGGGTATCATATCCTT
GATCGAGTTTGGCCGTATCTTTGGTTTTATGTTAGGTCCATTACTCCATA
TGGTCATACAACGAAAGCGGTATCAGCTTGGTGGTATCGAATTCGATAGT
ACCACGTTCCCAGGGCTTGCCATGACTTGTTTTTGGATCATCATGCAGTT
GGTGACGCTATTCTGGGTCCGCAATCTTGCAAAATCCATTCGCGAGAATC
CTGAGTTGATGGATGAAAGAGATAAAGAGTTTTCCTTCACCGATAAAGCA
ACAGAAGAAGAAAAAAAGCTTCTGTCTGAAGAAAATGTAAAGTCACGTGA
TCAAAAAATGTCTAATCACCATGGCAACAAGGAGGAAGAAAAACCAACTT
ATCTTAATAATAACAACAAAGAGAGACGCACGCAACCAAATATTTTTGAA
GAGATTTCACGTCTCTGTACGGCTAATGTCATCGTCATATTCTACCTGGA
TACGGTGCTATGGCTTGCTCAATCCGTTTTCGAATTCTTGTTACCACTTA
TTGCGGAATTTGAATACGGTTGGACACCTTTCCAAACGGGCGTGGTTTAC
ATGGCAGGTGGCATCGAACTCATCATGGTTTTCGGCTACTTGTATTACAT
CAGTAAACGTAATAATTTTCGCGATACTTATCTCATTTTATGGTCGTTGG
TAATGACTCTATTATCCTTAATGCTGCTCATTTTTGAGCGTTTAATGCCG
AAAACAAGTCAAAAAATTGGTATGTTTGTCACAATTTGCGGGTTGATGTT
CGTCGCTGTCCCGTTAAACCTGACCGGTGTAAAATCTCTACTCTCCAAAA
TCACACGACCTGAGTTTCAAGGTATCACTCAAGGTCTTTACGGTTCGGTT
TGTAGTTTTTCACTCATCATAGGGCCTATGTTGGGTAGTCTCATTTATAA
GCATCGAGCGGAATATGGCGGAGTGACAGCCATGTTGTCTATCACCTGCA
TCTTAGCATTGTGTGTTTGTATGGAGAAAATCCATGATCGGGAAGATCAA
ATCACAATAGAAACTGAAAACCAAGAATTCCTTAAAGATCTTGCTACCTT
TAGAAGTTGAAATCATAAAAAATACGAAAATGACACAACATCAGGCAATG
CAGATCTGTAGTAATACTTGAAGTCAAAACAACGAACATTTGACGTTCAT
AACGGTCGTCGAAAT

Coding sequence (CDS) from alignment at sc0000087:376084..379498-

>TCONS_00008781 ID=TCONS_00008781|Name=TCONS_00008781|organism=Clytia hemisphaerica|type=CDS|length=5193bp|location=Sequence derived from alignment at sc0000087:376084..379498- (Clytia hemisphaerica)
GTGAGATTTGCGAGTTATATCCAAAGACCCACCGTACGGGTATCATATCC
TTGATCGAGTTTGGCCGTATCTTTGGTTTTATGTTAGGTCCATTACTCCA
TATGGTCATACAACGAAAGCGGTATCAGCTTGGTGGTATCGAATTCGATA
GTACCACGTTCCCAGGGCTTGCCATGACTTGTTTTTGGATCATCATGCAG
TTGGTGACGCTATTCTGGGTCCGCAATCTTGCAAAATCCATTCGCGAGAA
TCCTGAGTTGATGGATGAAAGAGATAAAGAGTTTTCCTTCACCGATAAAG
CAACAGAAGAAGAAAAAAAGCTTCTGTCTGAAGAAAATGTAAAGTCACGT
GATCAAAAAATGTCTAATCACCATGGCAACAAGGAGGAAGAAAAACCAAC
TTATCTTAATAATAACAACAAAGAGAGACGCACGCAACCAAATATTTTTG
AAGAGATTTCACGTCTCTGTACGGCTAATGTCATCGTCATATTCTACCTG
GATACGGTGCTATGGCTTGCTCAATCCGTTTTCGAATTCTTGTTACCACT
TATTGCGGAATTTGAATACGGTTGGACACCTTTCCAAACGGGCGTGGTTT
ACATGGCAGGTGGCATCGAACTCATCATGGTTTTCGGCTACTTGTATTAC
ATCAGTAAACGTAATAATTTTCGCGATACTTATCTCATTTTATGGTCGTT
GGTAATGACTCTATTATCCTTAATGCTGCTCATTTTTGAGCGTTTAATGC
CGAAAACAAGTCAAAAAATTGGTATGTTTGTCACAATTTGCGGGTTGATG
TTCGTCGCTGTCCCGTTAAACCTGACCGGTGTAAAATCTCTACTCTCCAA
AATCACACGACCTGAGTTTCAAGGTATCACTCAAGGTCTTTACGGTTCGG
TTTGTAGTTTTTCACTCATCATAGGGCCTATGTTGGGTAGTCTCATTTAT
AAGCATCGAGCGGAATATGGCGGAGTGACAGCCATGTTGTCTATCACCTG
CATCTTAGCATTGTGTGTTTGTATGGAGAAAATCCATGATCGGGAAGATC
AAATCACAATAGAAACTGAAAACCAAGAATTCCTTAAAGATCTTGCTACC
TTTAGAAGTTGAATCATTCACAATGAAAATAATATCAAGTTTAGAAGAGA
ATCATTCGTTCGTTTTAAAGCGACGTCTTCTCATCATGGCCTTCATTTTT
CGCATGTTTCTTATCGGAGTTCAATATTCAGTGATTTTACCAACTTGTAT
GCTGTATATGAAAAAATTTGGTGTCGGCGAAACTTTCACCGGGACTGTCA
TTGCAGCTTATCCGTTCGCTAGCATGATTTCAGCTTTCGTTGTTGGCTAC
GCATACAACAAGACAAGACGAGTCAAAGAGATCATATTGATTATGAATAC
TTTTCAGATCATCGGTAATATCGTTTACGCGCTACCCTACTCGCCGTTTT
TACCACTCGCGGGACGTTTTATTTGTGGACTTGGGGATAGCTTTATTGGT
GCTACCATTGCCATACCAGCATGTAGCTTTTCAAAGTTATATCAAGAATT
CATTGACTTCAAATCTGTACCGTCCTAAAAATCTGACCTACACAAACAAG
AGGATTATAGTCGGTTTTGCGACAGAGGGAAGTTCTTCCTCAGAAGAAGA
AGAAGAAGACTTCACAGAAGATTTCAGTTGGGAGAATCTACAACACCGCA
CTGAAAAACACCTAATCGAGGCTGACCCAACGTGAGATTTGCGAGTTATA
TCCAAAGACCCACCGTACGGGTATCATATCCTTGATCGAGTTTGGCCGTA
TCTTTGGTTTTATGTTAGGTCCATTACTCCATATGGTCATACAACGAAAG
CGGTATCAGCTTGGTGGTATCGAATTCGATAGTACCACGTTCCCAGGGCT
TGCCATGACTTGTTTTTGGATCATCATGCAGTTGGTGACGCTATTCTGGG
TCCGCAATCTTGCAAAATCCATTCGCGAGAATCCTGAGTTGATGGATGAA
AGAGATAAAGAGTTTTCCTTCACCGATAAAGCAACAGAAGAAGAAAAAAA
GCTTCTGTCTGAAGAAAATGTAAAGTCACGTGATCAAAAAATGTCTAATC
ACCATGGCAACAAGGAGGAAGAAAAACCAACTTATCTTAATAATAACAAC
AAAGAGAGACGCACGCAACCAAATATTTTTGAAGAGATTTCACGTCTCTG
TACGGCTAATGTCATCGTCATATTCTACCTGGATACGGTGCTATGGCTTG
CTCAATCCGTTTTCGAATTCTTGTTACCACTTATTGCGGAATTTGAATAC
GGTTGGACACCTTTCCAAACGGGCGTGGTTTACATGGCAGGTGGCATCGA
ACTCATCATGGTTTTCGGCTACTTGTATTACATCAGTAAACGTAATAATT
TTCGCGATACTTATCTCATTTTATGGTCGTTGGTAATGACTCTATTATCC
TTAATGCTGCTCATTTTTGAGCGTTTAATGCCGAAAACAAGTCAAAAAAT
TGGTATGTTTGTCACAATTTGCGGGTTGATGTTCGTCGCTGTCCCGTTAA
ACCTGACCGGTGTAAAATCTCTACTCTCCAAAATCACACGACCTGAGTTT
CAAGGTATCACTCAAGGTCTTTACGGTTCGGTTTGTAGTTTTTCACTCAT
CATAGGGCCTATGTTGGGTAGTCTCATTTATAAGCATCGAGCGGAATATG
GCGGAGTGACAGCCATGTTGTCTATCACCTGCATCTTAGCATTGTGTGTT
TGTATGGAGAAAATCCATGATCGGGAAGATCAAATCACAATAGAAACTGA
AAACCAAGAATTCCTTAAAGATCTTGCTACCTTTAGAAGTTGAATCATTC
ACAATGAAAATAATATCAAGTTTAGAAGAGAATCATTCGTTCGTTTTAAA
GCGACGTCTTCTCATCATGGCCTTCATTTTTCGCATGTTTCTTATCGGAG
TTCAATATTCAGTGATTTTACCAACTTGTATGCTGTATATGAAAAAATTT
GGTGTCGGCGAAACTTTCACCGGGACTGTCATTGCAGCTTATCCGTTCGC
TAGCATGATTTCAGCTTTCGTTGTTGGCTACGCATACAACAAGACAAGAC
GAGTCAAAGAGATCATATTGATTATGAATACTTTTCAGATCATCGGTAAT
ATCGTTTACGCGCTACCCTACTCGCCGTTTTTACCACTCGCGGGACGTTT
TATTTGTGGACTTGGGGATAGCTTTATTGGTGCTACCATTGCCATACCAG
CATGTAGCTTTTCAAAGTTATATCAAGAATTCATTGACTTCAAATCTGTA
CCGTCCTAAAAATCTGACCTACACAAACAAGAGGATTATAGTCGGTTTTG
CGACAGAGGGAAGTTCTTCCTCAGAAGAAGAAGAAGAAGACTTCACAGAA
GATTTCAGTTGGGAGAATCTACAACACCGCACTGAAAAACACCTAATCGA
GGCTGACCCAACGTGAGATTTGCGAGTTATATCCAAAGACCCACCGTACG
GGTATCATATCCTTGATCGAGTTTGGCCGTATCTTTGGTTTTATGTTAGG
TCCATTACTCCATATGGTCATACAACGAAAGCGGTATCAGCTTGGTGGTA
TCGAATTCGATAGTACCACGTTCCCAGGGCTTGCCATGACTTGTTTTTGG
ATCATCATGCAGTTGGTGACGCTATTCTGGGTCCGCAATCTTGCAAAATC
CATTCGCGAGAATCCTGAGTTGATGGATGAAAGAGATAAAGAGTTTTCCT
TCACCGATAAAGCAACAGAAGAAGAAAAAAAGCTTCTGTCTGAAGAAAAT
GTAAAGTCACGTGATCAAAAAATGTCTAATCACCATGGCAACAAGGAGGA
AGAAAAACCAACTTATCTTAATAATAACAACAAAGAGAGACGCACGCAAC
CAAATATTTTTGAAGAGATTTCACGTCTCTGTACGGCTAATGTCATCGTC
ATATTCTACCTGGATACGGTGCTATGGCTTGCTCAATCCGTTTTCGAATT
CTTGTTACCACTTATTGCGGAATTTGAATACGGTTGGACACCTTTCCAAA
CGGGCGTGGTTTACATGGCAGGTGGCATCGAACTCATCATGGTTTTCGGC
TACTTGTATTACATCAGTAAACGTAATAATTTTCGCGATACTTATCTCAT
TTTATGGTCGTTGGTAATGACTCTATTATCCTTAATGCTGCTCATTTTTG
AGCGTTTAATGCCGAAAACAAGTCAAAAAATTGGTATGTTTGTCACAATT
TGCGGGTTGATGTTCGTCGCTGTCCCGTTAAACCTGACCGGTGTAAAATC
TCTACTCTCCAAAATCACACGACCTGAGTTTCAAGGTATCACTCAAGGTC
TTTACGGTTCGGTTTGTAGTTTTTCACTCATCATAGGGCCTATGTTGGGT
AGTCTCATTTATAAGCATCGAGCGGAATATGGCGGAGTGACAGCCATGTT
GTCTATCACCTGCATCTTAGCATTGTGTGTTTGTATGGAGAAAATCCATG
ATCGGGAAGATCAAATCACAATAGAAACTGAAAACCAAGAATTCCTTAAA
GATCTTGCTACCTTTAGAAGTTGAATCATTCACAATGAAAATAATATCAA
GTTTAGAAGAGAATCATTCGTTCGTTTTAAAGCGACGTCTTCTCATCATG
GCCTTCATTTTTCGCATGTTTCTTATCGGAGTTCAATATTCAGTGATTTT
ACCAACTTGTATGCTGTATATGAAAAAATTTGGTGTCGGCGAAACTTTCA
CCGGGACTGTCATTGCAGCTTATCCGTTCGCTAGCATGATTTCAGCTTTC
GTTGTTGGCTACGCATACAACAAGACAAGACGAGTCAAAGAGATCATATT
GATTATGAATACTTTTCAGATCATCGGTAATATCGTTTACGCGCTACCCT
ACTCGCCGTTTTTACCACTCGCGGGACGTTTTATTTGTGGACTTGGGGAT
AGCTTTATTGGTGCTACCATTGCCATACCAGCATGTAGCTTTTCAAAGTT
ATATCAAGAATTCATTGACTTCAAATCTGTACCGTCCTAAAAATCTGACC
TACACAAACAAGAGGATTATAGTCGGTTTTGCGACAGAGGGAAGTTCTTC
CTCAGAAGAAGAAGAAGAAGACTTCACAGAAGATTTCAGTTGGGAGAATC
TACAACACCGCACTGAAAAACACCTAATCGAGGCTGACCCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004921XLOC_004921Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008781-proteinTCONS_00008781-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008781-exon-sc0000087-1575043694:379276..379498TCONS_00008781-exon-sc0000087-1575043694:379276..379498Clytia hemisphaericaexon
TCONS_00008781-exon-sc0000087-1575043694:377675..378072TCONS_00008781-exon-sc0000087-1575043694:377675..378072Clytia hemisphaericaexon
TCONS_00008781-exon-sc0000087-1575043694:376084..377300TCONS_00008781-exon-sc0000087-1575043694:376084..377300Clytia hemisphaericaexon
TCONS_00008781-exon-sc0000087-1510915933:379276..379498TCONS_00008781-exon-sc0000087-1510915933:379276..379498Clytia hemisphaericaexon
TCONS_00008781-exon-sc0000087-1510915933:377675..378072TCONS_00008781-exon-sc0000087-1510915933:377675..378072Clytia hemisphaericaexon
TCONS_00008781-exon-sc0000087-1510915933:376084..377300TCONS_00008781-exon-sc0000087-1510915933:376084..377300Clytia hemisphaericaexon
TCONS_00008781-exon-sc0000087-1491911889:379276..379498TCONS_00008781-exon-sc0000087-1491911889:379276..379498Clytia hemisphaericaexon
TCONS_00008781-exon-sc0000087-1491911889:377675..378072TCONS_00008781-exon-sc0000087-1491911889:377675..378072Clytia hemisphaericaexon
TCONS_00008781-exon-sc0000087-1491911889:376084..377300TCONS_00008781-exon-sc0000087-1491911889:376084..377300Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:376084..379498 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0336195	0.0424756	0.221932	0	0	0	0.0560003	0.0524268	0	0	0	0	0	0	0	0.0132714	0.256328	0.627307	0	0.0242263	0	0	0	0	0	0	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008781 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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