TCONS_00008668 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008668
Unique NameTCONS_00008668
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length168

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008668 ID=TCONS_00008668|Name=TCONS_00008668|organism=Clytia hemisphaerica|type=transcript|length=168bp
ATGCACATATTGTGCATTTTCAAACGAAATACGAAAACAGACAAACGAAC
GGGGTCTTTCAAACTGCCTCTGATCGGGGTGGGTTCTCCCTGTTTGGGGA
GATTTATTGTTTGACACCCAAGTATACTTGTAAACTGACGCTTATGAAGC
GTGACGAATTAAATGANN
Run BLAST on NCBI

transcript from alignment at sc0000086:585304..585471

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008668 ID=TCONS_00008668|Name=TCONS_00008668|organism=Clytia hemisphaerica|type=transcript|length=168bp|location=Sequence derived from alignment at sc0000086:585304..585471 (Clytia hemisphaerica)
NNTCATTTAATTCGTCACGCTTCATAAGCGTCAGTTTACAAGTATACTTG
GGTGTCAAACAATAAATCTCCCCAAACAGGGAGAACCCACCCCGATCAGA
GGCAGTTTGAAAGACCCCGTTCGTTTGTCTGTTTTCGTATTTCGTTTGAA
AATGCACAATATGTGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004868XLOC_004868Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008668-exon-sc0000086-1491911889:585304..585471TCONS_00008668-exon-sc0000086-1491911889:585304..585471Clytia hemisphaericaexon
TCONS_00008668-exon-sc0000086-1510915933:585304..585471TCONS_00008668-exon-sc0000086-1510915933:585304..585471Clytia hemisphaericaexon
TCONS_00008668-exon-sc0000086-1575043694:585304..585471TCONS_00008668-exon-sc0000086-1575043694:585304..585471Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:585304..585471 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008668 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top